## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[EMR_012-ACBI1_1_8000_1.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=EMR_012-ACBI1_1_8000_1.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=EMR_012-ACBI1_1_8000_1.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Mar 02 03:13:49 PST 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	5074665	0	0	175023	52066	0.03449	100901491

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010108
2.0	1.97067
3.0	2.884118
4.0	3.752761
5.0	4.578798
6.0	5.364318
7.0	6.111309
8.0	6.82166
9.0	7.497169
10.0	8.139545
11.0	8.750412
12.0	9.331317
13.0	9.883728
14.0	10.409044
15.0	10.908594
16.0	11.383641
17.0	11.835387
18.0	12.264975
19.0	12.673492
20.0	13.061971
21.0	13.431396
22.0	13.782701
23.0	14.116774
24.0	14.434462
25.0	14.736566
26.0	15.023853
27.0	15.297049
28.0	15.556844
29.0	15.803897
30.0	16.038831
31.0	16.262243
32.0	16.474696
33.0	16.676728
34.0	16.868851
35.0	17.05155
36.0	17.225288
37.0	17.390505
38.0	17.547617
39.0	17.697023
40.0	17.839101
41.0	17.97421
42.0	18.102692
43.0	18.224872
44.0	18.341059
45.0	18.451547
46.0	18.556616
47.0	18.656531
48.0	18.751546
49.0	18.8419
50.0	18.927822
51.0	19.00953
52.0	19.08723
53.0	19.161119
54.0	19.231384
55.0	19.298202
56.0	19.361743
57.0	19.422167
58.0	19.479627
59.0	19.534269
60.0	19.586231
61.0	19.635645
62.0	19.682634
63.0	19.727319
64.0	19.769812
65.0	19.81022
66.0	19.848647
67.0	19.885189
68.0	19.919938
69.0	19.952983
70.0	19.984407
71.0	20.01429
72.0	20.042707
73.0	20.06973
74.0	20.095428
75.0	20.119866
76.0	20.143104
77.0	20.165203
78.0	20.186218
79.0	20.206202
80.0	20.225206
81.0	20.243278
82.0	20.260463
83.0	20.276806
84.0	20.292346
85.0	20.307125
86.0	20.321179
87.0	20.334543
88.0	20.347252
89.0	20.359337
90.0	20.37083
91.0	20.381759
92.0	20.392152
93.0	20.402035
94.0	20.411434
95.0	20.420371
96.0	20.42887
97.0	20.436952
98.0	20.444638
99.0	20.451947
100.0	20.458897