## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[EMR_011-ACBI1_1_4000_2.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=EMR_011-ACBI1_1_4000_2.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=EMR_011-ACBI1_1_4000_2.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Mar 02 03:13:49 PST 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	7451581	0	0	321441	82825	0.043137	111308388

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010868
2.0	1.956279
3.0	2.84047
4.0	3.667407
5.0	4.440797
6.0	5.164107
7.0	5.84058
8.0	6.473249
9.0	7.06495
10.0	7.618336
11.0	8.135889
12.0	8.619928
13.0	9.072624
14.0	9.496006
15.0	9.891972
16.0	10.262298
17.0	10.608645
18.0	10.932564
19.0	11.235508
20.0	11.518835
21.0	11.783816
22.0	12.031638
23.0	12.263413
24.0	12.48018
25.0	12.68291
26.0	12.872512
27.0	13.049837
28.0	13.21568
29.0	13.370784
30.0	13.515844
31.0	13.651511
32.0	13.778393
33.0	13.897059
34.0	14.008041
35.0	14.111837
36.0	14.208911
37.0	14.299699
38.0	14.384609
39.0	14.46402
40.0	14.538289
41.0	14.607749
42.0	14.672711
43.0	14.733467
44.0	14.790288
45.0	14.84343
46.0	14.893131
47.0	14.939614
48.0	14.983087
49.0	15.023744
50.0	15.061769
51.0	15.097332
52.0	15.130592
53.0	15.161698
54.0	15.19079
55.0	15.217998
56.0	15.243444
57.0	15.267243
58.0	15.2895
59.0	15.310316
60.0	15.329785
61.0	15.347992
62.0	15.365021
63.0	15.380947
64.0	15.395842
65.0	15.409772
66.0	15.4228
67.0	15.434985
68.0	15.44638
69.0	15.457038
70.0	15.467006
71.0	15.476328
72.0	15.485046
73.0	15.4932
74.0	15.500826
75.0	15.507958
76.0	15.514628
77.0	15.520867
78.0	15.526701
79.0	15.532158
80.0	15.537261
81.0	15.542034
82.0	15.546498
83.0	15.550672
84.0	15.554577
85.0	15.558228
86.0	15.561643
87.0	15.564837
88.0	15.567824
89.0	15.570618
90.0	15.573231
91.0	15.575675
92.0	15.57796
93.0	15.580097
94.0	15.582096
95.0	15.583966
96.0	15.585714
97.0	15.58735
98.0	15.588879
99.0	15.590309
100.0	15.591647