## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[EMR_010-ACBI1_1_4000_1.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=EMR_010-ACBI1_1_4000_1.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=EMR_010-ACBI1_1_4000_1.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Mar 02 03:13:49 PST 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	2260428	0	0	78668	21372	0.034802	43000174

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.009296
2.0	1.966907
3.0	2.875478
4.0	3.737521
5.0	4.555418
6.0	5.331431
7.0	6.067705
8.0	6.766274
9.0	7.429069
10.0	8.057922
11.0	8.654571
12.0	9.220666
13.0	9.757772
14.0	10.267372
15.0	10.750875
16.0	11.209618
17.0	11.644869
18.0	12.057831
19.0	12.449645
20.0	12.821394
21.0	13.174106
22.0	13.508755
23.0	13.826267
24.0	14.127519
25.0	14.413344
26.0	14.684532
27.0	14.941832
28.0	15.185956
29.0	15.417578
30.0	15.637339
31.0	15.845846
32.0	16.043676
33.0	16.231374
34.0	16.40946
35.0	16.578427
36.0	16.738741
37.0	16.890845
38.0	17.03516
39.0	17.172084
40.0	17.301997
41.0	17.425256
42.0	17.542204
43.0	17.653163
44.0	17.758439
45.0	17.858324
46.0	17.953094
47.0	18.043011
48.0	18.128324
49.0	18.209267
50.0	18.286065
51.0	18.358931
52.0	18.428065
53.0	18.493659
54.0	18.555893
55.0	18.614941
56.0	18.670964
57.0	18.724119
58.0	18.774552
59.0	18.822402
60.0	18.867802
61.0	18.910876
62.0	18.951745
63.0	18.990521
64.0	19.027311
65.0	19.062217
66.0	19.095336
67.0	19.126759
68.0	19.156572
69.0	19.184859
70.0	19.211697
71.0	19.237161
72.0	19.261321
73.0	19.284243
74.0	19.305992
75.0	19.326627
76.0	19.346205
77.0	19.364781
78.0	19.382405
79.0	19.399127
80.0	19.414992
81.0	19.430045
82.0	19.444328
83.0	19.457878
84.0	19.470735
85.0	19.482934
86.0	19.494507
87.0	19.505488
88.0	19.515907
89.0	19.525792
90.0	19.535171
91.0	19.54407
92.0	19.552513
93.0	19.560523
94.0	19.568124
95.0	19.575335
96.0	19.582177
97.0	19.588668
98.0	19.594827
99.0	19.600671
100.0	19.606215