## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[RFe_BEF-R2-ATAC-GSM6910808.2x36mers.GCA_014108255.1_mRhiFer1.p_genomic.nochrM.unique.bam] OUTPUT=RFe_BEF-R2-ATAC-GSM6910808.2x36mers.GCA_014108255.1_mRhiFer1.p_genomic.nochrM.unique.dedup.bam METRICS_FILE=RFe_BEF-R2-ATAC-GSM6910808.2x36mers.GCA_014108255.1_mRhiFer1.p_genomic.nochrM.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Mar 07 07:08:19 PST 2023

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	30404943	0	0	5557606	0	0.182786	72692671

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.658186
3.0	2.091396
4.0	2.376529
5.0	2.564199
6.0	2.687721
7.0	2.769022
8.0	2.822533
9.0	2.857753
10.0	2.880934
11.0	2.896192
12.0	2.906234
13.0	2.912844
14.0	2.917195
15.0	2.920058
16.0	2.921943
17.0	2.923183
18.0	2.924
19.0	2.924537
20.0	2.924891
21.0	2.925124
22.0	2.925277
23.0	2.925378
24.0	2.925444
25.0	2.925488
26.0	2.925517
27.0	2.925535
28.0	2.925548
29.0	2.925556
30.0	2.925562
31.0	2.925565
32.0	2.925567
33.0	2.925569
34.0	2.92557
35.0	2.925571
36.0	2.925571
37.0	2.925571
38.0	2.925572
39.0	2.925572
40.0	2.925572
41.0	2.925572
42.0	2.925572
43.0	2.925572
44.0	2.925572
45.0	2.925572
46.0	2.925572
47.0	2.925572
48.0	2.925572
49.0	2.925572
50.0	2.925572
51.0	2.925572
52.0	2.925572
53.0	2.925572
54.0	2.925572
55.0	2.925572
56.0	2.925572
57.0	2.925572
58.0	2.925572
59.0	2.925572
60.0	2.925572
61.0	2.925572
62.0	2.925572
63.0	2.925572
64.0	2.925572
65.0	2.925572
66.0	2.925572
67.0	2.925572
68.0	2.925572
69.0	2.925572
70.0	2.925572
71.0	2.925572
72.0	2.925572
73.0	2.925572
74.0	2.925572
75.0	2.925572
76.0	2.925572
77.0	2.925572
78.0	2.925572
79.0	2.925572
80.0	2.925572
81.0	2.925572
82.0	2.925572
83.0	2.925572
84.0	2.925572
85.0	2.925572
86.0	2.925572
87.0	2.925572
88.0	2.925572
89.0	2.925572
90.0	2.925572
91.0	2.925572
92.0	2.925572
93.0	2.925572
94.0	2.925572
95.0	2.925572
96.0	2.925572
97.0	2.925572
98.0	2.925572
99.0	2.925572
100.0	2.925572