## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[latering1.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.bam] OUTPUT=latering1.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.dedup.bam METRICS_FILE=latering1.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Jan 19 21:04:56 PST 2022

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	6738068	0	0	548170	0	0.081354	39134060

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.841828
3.0	2.550503
4.0	3.147086
5.0	3.649306
6.0	4.07209
7.0	4.428001
8.0	4.727617
9.0	4.979842
10.0	5.192172
11.0	5.370918
12.0	5.521391
13.0	5.648064
14.0	5.7547
15.0	5.84447
16.0	5.920041
17.0	5.983658
18.0	6.037213
19.0	6.082297
20.0	6.12025
21.0	6.1522
22.0	6.179097
23.0	6.201739
24.0	6.2208
25.0	6.236846
26.0	6.250354
27.0	6.261725
28.0	6.271298
29.0	6.279356
30.0	6.28614
31.0	6.291851
32.0	6.296659
33.0	6.300706
34.0	6.304113
35.0	6.306981
36.0	6.309396
37.0	6.311428
38.0	6.31314
39.0	6.31458
40.0	6.315793
41.0	6.316813
42.0	6.317673
43.0	6.318396
44.0	6.319005
45.0	6.319518
46.0	6.319949
47.0	6.320313
48.0	6.320619
49.0	6.320876
50.0	6.321093
51.0	6.321275
52.0	6.321429
53.0	6.321558
54.0	6.321667
55.0	6.321759
56.0	6.321836
57.0	6.321901
58.0	6.321955
59.0	6.322001
60.0	6.32204
61.0	6.322073
62.0	6.3221
63.0	6.322123
64.0	6.322143
65.0	6.322159
66.0	6.322173
67.0	6.322185
68.0	6.322194
69.0	6.322203
70.0	6.322209
71.0	6.322215
72.0	6.32222
73.0	6.322224
74.0	6.322228
75.0	6.322231
76.0	6.322233
77.0	6.322235
78.0	6.322237
79.0	6.322239
80.0	6.32224
81.0	6.322241
82.0	6.322242
83.0	6.322242
84.0	6.322243
85.0	6.322244
86.0	6.322244
87.0	6.322244
88.0	6.322245
89.0	6.322245
90.0	6.322245
91.0	6.322245
92.0	6.322246
93.0	6.322246
94.0	6.322246
95.0	6.322246
96.0	6.322246
97.0	6.322246
98.0	6.322246
99.0	6.322246
100.0	6.322246