## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[adult65.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.bam] OUTPUT=adult65.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.dedup.bam METRICS_FILE=adult65.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Jan 19 21:04:55 PST 2022

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	16238448	0	0	965424	0	0.059453	131097263

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.883499
3.0	2.664068
4.0	3.3537
5.0	3.962989
6.0	4.501295
7.0	4.976888
8.0	5.397073
9.0	5.768306
10.0	6.09629
11.0	6.386063
12.0	6.642077
13.0	6.868266
14.0	7.068103
15.0	7.244658
16.0	7.400645
17.0	7.538459
18.0	7.660217
19.0	7.767791
20.0	7.862832
21.0	7.9468
22.0	8.020986
23.0	8.08653
24.0	8.144437
25.0	8.195598
26.0	8.240799
27.0	8.280734
28.0	8.316016
29.0	8.347188
30.0	8.374728
31.0	8.39906
32.0	8.420557
33.0	8.43955
34.0	8.45633
35.0	8.471155
36.0	8.484253
37.0	8.495825
38.0	8.506049
39.0	8.515082
40.0	8.523062
41.0	8.530113
42.0	8.536342
43.0	8.541846
44.0	8.546708
45.0	8.551004
46.0	8.5548
47.0	8.558153
48.0	8.561115
49.0	8.563733
50.0	8.566045
51.0	8.568089
52.0	8.569894
53.0	8.571488
54.0	8.572897
55.0	8.574142
56.0	8.575242
57.0	8.576214
58.0	8.577072
59.0	8.577831
60.0	8.578501
61.0	8.579093
62.0	8.579616
63.0	8.580078
64.0	8.580486
65.0	8.580847
66.0	8.581166
67.0	8.581447
68.0	8.581696
69.0	8.581916
70.0	8.58211
71.0	8.582282
72.0	8.582433
73.0	8.582567
74.0	8.582685
75.0	8.58279
76.0	8.582882
77.0	8.582964
78.0	8.583036
79.0	8.5831
80.0	8.583156
81.0	8.583206
82.0	8.58325
83.0	8.583288
84.0	8.583323
85.0	8.583353
86.0	8.58338
87.0	8.583403
88.0	8.583424
89.0	8.583443
90.0	8.583459
91.0	8.583473
92.0	8.583486
93.0	8.583497
94.0	8.583507
95.0	8.583516
96.0	8.583524
97.0	8.583531
98.0	8.583537
99.0	8.583542
100.0	8.583547

