## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[adult54.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.bam] OUTPUT=adult54.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.dedup.bam METRICS_FILE=adult54.2x36mers.Amphimedon_queenslandica.Aqu1.20.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Jan 19 21:04:56 PST 2022

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	11992837	0	0	476428	0	0.039726	146919598

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.921614
3.0	2.770987
4.0	3.553781
5.0	4.275215
6.0	4.940099
7.0	5.552865
8.0	6.1176
9.0	6.638067
10.0	7.117737
11.0	7.559807
12.0	7.967226
13.0	8.342708
14.0	8.688759
15.0	9.007683
16.0	9.301609
17.0	9.572495
18.0	9.822147
19.0	10.052231
20.0	10.264279
21.0	10.459705
22.0	10.639813
23.0	10.805803
24.0	10.958781
25.0	11.099768
26.0	11.229704
27.0	11.349455
28.0	11.459819
29.0	11.561532
30.0	11.655272
31.0	11.741664
32.0	11.821285
33.0	11.894664
34.0	11.962291
35.0	12.024618
36.0	12.082059
37.0	12.134997
38.0	12.183785
39.0	12.22875
40.0	12.27019
41.0	12.308381
42.0	12.343579
43.0	12.376018
44.0	12.405914
45.0	12.433466
46.0	12.458859
47.0	12.482262
48.0	12.50383
49.0	12.523707
50.0	12.542026
51.0	12.55891
52.0	12.57447
53.0	12.58881
54.0	12.602026
55.0	12.614206
56.0	12.625432
57.0	12.635777
58.0	12.645312
59.0	12.654099
60.0	12.662198
61.0	12.669661
62.0	12.67654
63.0	12.682879
64.0	12.688722
65.0	12.694106
66.0	12.699069
67.0	12.703642
68.0	12.707857
69.0	12.711742
70.0	12.715322
71.0	12.718621
72.0	12.721662
73.0	12.724464
74.0	12.727047
75.0	12.729427
76.0	12.731621
77.0	12.733643
78.0	12.735506
79.0	12.737224
80.0	12.738806
81.0	12.740265
82.0	12.741609
83.0	12.742848
84.0	12.74399
85.0	12.745042
86.0	12.746012
87.0	12.746906
88.0	12.747729
89.0	12.748488
90.0	12.749188
91.0	12.749833
92.0	12.750427
93.0	12.750975
94.0	12.75148
95.0	12.751945
96.0	12.752373
97.0	12.752769
98.0	12.753133
99.0	12.753468
100.0	12.753778