## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[LUC2-NSD2.2x25mers.hg38.unique.bam] OUTPUT=LUC2-NSD2.2x25mers.hg38.unique.dedup.bam METRICS_FILE=LUC2-NSD2.2x25mers.hg38.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Feb 01 14:20:03 PST 2023

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	6325331	4032592	0	1213706	810273	0.19188	35834617

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.134379
2.0	2.085201
3.0	2.882167
4.0	3.550173
5.0	4.110086
6.0	4.579399
7.0	4.97277
8.0	5.302488
9.0	5.578854
10.0	5.8105
11.0	6.004662
12.0	6.167407
13.0	6.303817
14.0	6.418154
15.0	6.51399
16.0	6.594318
17.0	6.661649
18.0	6.718084
19.0	6.765387
20.0	6.805036
21.0	6.838269
22.0	6.866125
23.0	6.889473
24.0	6.909043
25.0	6.925447
26.0	6.939196
27.0	6.95072
28.0	6.96038
29.0	6.968476
30.0	6.975263
31.0	6.980951
32.0	6.985719
33.0	6.989715
34.0	6.993065
35.0	6.995872
36.0	6.998226
37.0	7.000198
38.0	7.001852
39.0	7.003237
40.0	7.004399
41.0	7.005373
42.0	7.006189
43.0	7.006873
44.0	7.007446
45.0	7.007927
46.0	7.008329
47.0	7.008667
48.0	7.00895
49.0	7.009187
50.0	7.009386
51.0	7.009553
52.0	7.009692
53.0	7.009809
54.0	7.009908
55.0	7.00999
56.0	7.010059
57.0	7.010117
58.0	7.010165
59.0	7.010206
60.0	7.01024
61.0	7.010268
62.0	7.010292
63.0	7.010312
64.0	7.010329
65.0	7.010343
66.0	7.010355
67.0	7.010365
68.0	7.010373
69.0	7.01038
70.0	7.010386
71.0	7.010391
72.0	7.010395
73.0	7.010398
74.0	7.010401
75.0	7.010403
76.0	7.010405
77.0	7.010407
78.0	7.010409
79.0	7.01041
80.0	7.010411
81.0	7.010412
82.0	7.010412
83.0	7.010413
84.0	7.010413
85.0	7.010414
86.0	7.010414
87.0	7.010414
88.0	7.010415
89.0	7.010415
90.0	7.010415
91.0	7.010415
92.0	7.010415
93.0	7.010415
94.0	7.010415
95.0	7.010416
96.0	7.010416
97.0	7.010416
98.0	7.010416
99.0	7.010416
100.0	7.010416

