Index of /kundaje/marinovg/oak/CUTnRUN/2019-04-21-CUTnRUN-peak_calling
Name
Last modified
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Parent Directory
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HMMRATAC-1.2.5-2018-10-02-SCGPM_CUT-RUN-test2_A549-FOSL2-GFP-ATWJL_L1_GCCAAT.2x25mers.minFL150bp_peaks.gappedPeak.gz
2019-04-22 04:16
4.0M
HMMRATAC-1.2.5-2018-10-02-SCGPM_CUT-RUN-test2_A549-FOSL2-GFP-ATWJL_L1_GCCAAT.2x25mers.minFL150bp_summits.bed.gz
2019-04-22 04:16
1.6M
HMMRATAC-1.2.5-2018-10-02-SCGPM_CUT-RUN-test2_A549-FOSL2-GFP-ATWJL_L1_GCCAAT.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:22
14M
HMMRATAC-1.2.5-2018-10-02-SCGPM_CUT-RUN-test2_A549-FOSL2-GFP-ATWJL_L1_GCCAAT.2x25mers_summits.bed.gz
2019-04-22 04:22
5.7M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_1min_20160414_PS_HsDm_CTCF_1m-GSM2247142.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:24
4.3M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_1min_20160414_PS_HsDm_CTCF_1m-GSM2247142.2x25mers_summits.bed.gz
2019-04-22 04:24
1.8M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_2min_20160414_PS_HsDm_CTCF_2m-GSM2247143.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:22
3.5M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_2min_20160414_PS_HsDm_CTCF_2m-GSM2247143.2x25mers_summits.bed.gz
2019-04-22 04:22
1.4M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_3min_20160628_PS_HsDm_CTCF_0602_D-GSM2433139.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:14
5.2M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_3min_20160628_PS_HsDm_CTCF_0602_D-GSM2433139.2x25mers_summits.bed.gz
2019-04-22 04:14
2.1M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_4min_20160414_PS_HsDm_CTCF_4m-GSM2247144.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:27
4.1M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_4min_20160414_PS_HsDm_CTCF_4m-GSM2247144.2x25mers_summits.bed.gz
2019-04-22 04:27
1.7M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_7_5min_20160401_PS_HsDm_CTCF_7_5-GSM2247145.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:11
7.6M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_7_5min_20160401_PS_HsDm_CTCF_7_5-GSM2247145.2x25mers_summits.bed.gz
2019-04-22 04:11
3.1M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_8min_20160414_PS_HsDm_CTCF_8m-GSM2247146.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:28
4.3M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_8min_20160414_PS_HsDm_CTCF_8m-GSM2247146.2x25mers_summits.bed.gz
2019-04-22 04:28
1.8M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_9min_20160628_PS_HsDm_CTCF_0602_E-GSM2433142.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:36
7.6M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_9min_20160628_PS_HsDm_CTCF_0602_E-GSM2433142.2x25mers_summits.bed.gz
2019-04-22 04:36
3.1M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_15min_20160401_PS_HsDm_CTCF_15-GSM2247147.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:18
7.3M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_15min_20160401_PS_HsDm_CTCF_15-GSM2247147.2x25mers_summits.bed.gz
2019-04-22 04:18
3.0M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_27min_20160628_PS_HsDm_CTCF_0602_F-GSM2433138.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:43
7.9M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_27min_20160628_PS_HsDm_CTCF_0602_F-GSM2433138.2x25mers_summits.bed.gz
2019-04-22 04:43
3.2M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_30min_20160401_PS_HsDm_CTCF_30-GSM2247148.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:26
8.9M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_30min_20160401_PS_HsDm_CTCF_30-GSM2247148.2x25mers_summits.bed.gz
2019-04-22 04:26
3.6M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_45min_20160401_PS_HsDm_CTCF_45-GSM2247149.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:21
8.8M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_45min_20160401_PS_HsDm_CTCF_45-GSM2247149.2x25mers_summits.bed.gz
2019-04-22 04:21
3.6M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_45s_20160628_PS_HsDm_CTCF_0602_C-GSM2433140.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:11
4.6M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_45s_20160628_PS_HsDm_CTCF_0602_C-GSM2433140.2x25mers_summits.bed.gz
2019-04-22 04:11
1.8M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_disrupted_20160315_PS_HsDm_CTCF_expl_UB-GSM2247141.2x25mers_peaks.gappedPeak.gz
2019-04-22 05:11
39M
HMMRATAC-1.2.5-Cut_and_Run_CTCF_disrupted_20160315_PS_HsDm_CTCF_expl_UB-GSM2247141.2x25mers_summits.bed.gz
2019-04-22 05:11
16M
HMMRATAC-1.2.5-Cut_and_Run_H3K27me3_liberated_20161206_PS_HsDm_H30_npc1121-GSM2433143.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:44
14M
HMMRATAC-1.2.5-Cut_and_Run_H3K27me3_liberated_20161206_PS_HsDm_H30_npc1121-GSM2433143.2x25mers_summits.bed.gz
2019-04-22 04:44
5.6M
HMMRATAC-1.2.5-Cut_and_Run_H3K27me3_size_selected_20161206_PS_HsDm_H30ss1121-GSM2433144.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:49
16M
HMMRATAC-1.2.5-Cut_and_Run_H3K27me3_size_selected_20161206_PS_HsDm_H30ss1121-GSM2433144.2x25mers_summits.bed.gz
2019-04-22 04:49
6.3M
HMMRATAC-1.2.5-Cut_and_Run_Max_size_selected_20161206_PS_HsDm_Max_30_1201-GSM2433145.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:38
6.7M
HMMRATAC-1.2.5-Cut_and_Run_Max_size_selected_20161206_PS_HsDm_Max_30_1201-GSM2433145.2x25mers_summits.bed.gz
2019-04-22 04:38
2.7M
HMMRATAC-1.2.5-Cut_and_Run_Myc_size_selected_20161206_PS_HsDm_Myc_30_1201-GSM2433146.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:37
40M
HMMRATAC-1.2.5-Cut_and_Run_Myc_size_selected_20161206_PS_HsDm_Myc_30_1201-GSM2433146.2x25mers_summits.bed.gz
2019-04-22 04:37
17M
HMMRATAC-1.2.5-Cut_and_Run_no_antibody_size_selected_20161206_PS_HsDm_neg_30_1201-GSM2433147.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:32
46M
HMMRATAC-1.2.5-Cut_and_Run_no_antibody_size_selected_20161206_PS_HsDm_neg_30_1201-GSM2433147.2x25mers_summits.bed.gz
2019-04-22 04:32
19M
HMMRATAC-1.2.5-GATA1_CD34_Day9_30min-GSM2805378.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:11
41K
HMMRATAC-1.2.5-GATA1_CD34_Day9_30min-GSM2805378.2x25mers_summits.bed.gz
2019-04-22 04:11
13K
HMMRATAC-1.2.5-GATA1_HUDEP2_rep1_30min-GSM2805375.2x25mers_peaks.gappedPeak.gz
2019-04-22 04:55
23M
HMMRATAC-1.2.5-GATA1_HUDEP2_rep1_30min-GSM2805375.2x25mers_summits.bed.gz
2019-04-22 04:55
9.5M
SEACR_1.0-nonAUC_0.01-2018-10-02-SCGPM_CUT-RUN-test2_A549-FOSL2-GFP-ATWJL_L1_GCCAAT.auc.threshold.merge.bed.gz
2019-04-22 03:22
596K
SEACR_1.0-nonAUC_0.01-2018-10-02-SCGPM_CUT-RUN-test2_A549-FOSL2-GFP-ATWJL_L1_GCCAAT.maxFL120bp.auc.threshold.merge.bed.gz
2019-04-22 03:22
245K
SEACR_1.0-nonAUC_0.01-2018-10-02-SCGPM_CUT-RUN-test2_A549-FOSL2-GFP-ATWJL_L1_GCCAAT.minFL150bp.auc.threshold.merge.bed.gz
2019-04-22 03:22
451K
SEACR_1.0-nonAUC_0.01-2018-10-08-NF_Gata1_250_a.auc.threshold.merge.bed.gz
2019-04-22 03:22
453K
SEACR_1.0-nonAUC_0.01-2018-10-08-NF_Gata1_250_a.maxFL120bp.auc.threshold.merge.bed.gz
2019-04-22 03:22
168K
SEACR_1.0-nonAUC_0.01-2018-10-08-NF_Gata1_250_a.minFL150bp.auc.threshold.merge.bed.gz
2019-04-22 03:22
256K
SEACR_1.0-nonAUC_0.01-2018-10-08-NF_Gata1_250_b.auc.threshold.merge.bed.gz
2019-04-22 03:22
446K
SEACR_1.0-nonAUC_0.01-2018-10-08-NF_Gata1_250_b.maxFL120bp.auc.threshold.merge.bed.gz
2019-04-22 03:22
128K
SEACR_1.0-nonAUC_0.01-2018-10-08-NF_Gata1_250_b.minFL150bp.auc.threshold.merge.bed.gz
2019-04-22 03:22
283K
SEACR_1.0-nonAUC_0.01-A549-FOSL2-vs-ChIP-intersection1-vs-motifs-intersection1.gz
2019-04-22 11:20
336K
SEACR_1.0-nonAUC_0.01-A549-FOSL2-vs-ChIP-intersection1-vs-motifs-outersection1.gz
2019-04-22 11:20
79K
SEACR_1.0-nonAUC_0.01-A549-FOSL2-vs-ChIP-intersection1.gz
2019-04-22 11:08
411K
SEACR_1.0-nonAUC_0.01-A549-FOSL2-vs-ChIP-outersection1-vs-motifs-intersection1.gz
2019-04-22 11:19
98K
SEACR_1.0-nonAUC_0.01-A549-FOSL2-vs-ChIP-outersection1-vs-motifs-outersection1.gz
2019-04-22 11:19
95K
SEACR_1.0-nonAUC_0.01-A549-FOSL2-vs-ChIP-outersection1.gz
2019-04-22 11:08
190K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.maxFL120bp-vs-ChIP-intersection1-vs-motifs-intersection1.gz
2019-04-22 11:18
141K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.maxFL120bp-vs-ChIP-intersection1-vs-motifs-outersection1.gz
2019-04-22 11:18
76K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.maxFL120bp-vs-ChIP-intersection1.gz
2019-04-22 11:05
213K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.maxFL120bp-vs-ChIP-outersection1-vs-motifs-intersection1.gz
2019-04-22 11:18
5.6K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.maxFL120bp-vs-ChIP-outersection1-vs-motifs-outersection1.gz
2019-04-22 11:18
30K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.maxFL120bp-vs-ChIP-outersection1.gz
2019-04-22 11:05
35K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.minFL150bp-vs-ChIP-intersection1-vs-motifs-intersection1.gz
2019-04-22 11:19
283K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.minFL150bp-vs-ChIP-intersection1-vs-motifs-outersection1.gz
2019-04-22 11:19
64K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.minFL150bp-vs-ChIP-intersection1.gz
2019-04-22 11:07
343K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.minFL150bp-vs-ChIP-outersection1-vs-motifs-intersection1.gz
2019-04-22 11:18
57K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.minFL150bp-vs-ChIP-outersection1-vs-motifs-outersection1.gz
2019-04-22 11:18
58K
SEACR_1.0-nonAUC_0.01-A549-FOSL2.minFL150bp-vs-ChIP-outersection1.gz
2019-04-22 11:07
112K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_0_6million_20160315_PS_HsDm_CTCF_0_6-GSM2247138.auc.threshold.merge.bed.gz
2019-04-22 03:22
181K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_1min_20160414_PS_HsDm_CTCF_1m-GSM2247142.auc.threshold.merge.bed.gz
2019-04-22 03:22
312K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_2_5million_20160315_PS_HsDm_CTCF_2_5-GSM2247139.auc.threshold.merge.bed.gz
2019-04-22 03:22
223K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_2min_20160414_PS_HsDm_CTCF_2m-GSM2247143.auc.threshold.merge.bed.gz
2019-04-22 03:22
326K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_3min_20160628_PS_HsDm_CTCF_0602_D-GSM2433139.auc.threshold.merge.bed.gz
2019-04-22 03:22
270K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_4min_20160414_PS_HsDm_CTCF_4m-GSM2247144.auc.threshold.merge.bed.gz
2019-04-22 03:23
391K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_5s_20160628_PS_HsDm_CTCF_0602_A-GSM2433141.auc.threshold.merge.bed.gz
2019-04-22 03:23
186K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_7_5min_20160401_PS_HsDm_CTCF_7_5-GSM2247145.auc.threshold.merge.bed.gz
2019-04-22 03:23
385K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_8min_20160414_PS_HsDm_CTCF_8m-GSM2247146.auc.threshold.merge.bed.gz
2019-04-22 03:23
433K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_9min_20160628_PS_HsDm_CTCF_0602_E-GSM2433142.auc.threshold.merge.bed.gz
2019-04-22 03:23
337K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_10million_20160315_PS_HsDm_CTCF_10-GSM2247140.auc.threshold.merge.bed.gz
2019-04-22 03:22
201K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_15min_20160401_PS_HsDm_CTCF_15-GSM2247147.auc.threshold.merge.bed.gz
2019-04-22 03:22
380K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_15s_20160628_PS_HsDm_CTCF_0602_B-GSM2433137.auc.threshold.merge.bed.gz
2019-04-22 03:23
239K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_27min_20160628_PS_HsDm_CTCF_0602_F-GSM2433138.auc.threshold.merge.bed.gz
2019-04-22 03:23
391K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_30min_20160401_PS_HsDm_CTCF_30-GSM2247148.auc.threshold.merge.bed.gz
2019-04-22 03:23
384K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_45min_20160401_PS_HsDm_CTCF_45-GSM2247149.auc.threshold.merge.bed.gz
2019-04-22 03:22
390K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_45s_20160628_PS_HsDm_CTCF_0602_C-GSM2433140.auc.threshold.merge.bed.gz
2019-04-22 03:23
309K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_CTCF_disrupted_20160315_PS_HsDm_CTCF_expl_UB-GSM2247141.auc.threshold.merge.bed.gz
2019-04-22 03:24
711K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_H3K27me3_liberated_20161206_PS_HsDm_H30_npc1121-GSM2433143.auc.threshold.merge.bed.gz
2019-04-22 03:23
344K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_H3K27me3_size_selected_20161206_PS_HsDm_H30ss1121-GSM2433144.auc.threshold.merge.bed.gz
2019-04-22 03:23
444K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_Max_size_selected_20161206_PS_HsDm_Max_30_1201-GSM2433145.auc.threshold.merge.bed.gz
2019-04-22 03:23
444K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_Myc_size_selected_20161206_PS_HsDm_Myc_30_1201-GSM2433146.auc.threshold.merge.bed.gz
2019-04-22 03:24
775K
SEACR_1.0-nonAUC_0.01-Cut_and_Run_no_antibody_size_selected_20161206_PS_HsDm_neg_30_1201-GSM2433147.auc.threshold.merge.bed.gz
2019-04-22 03:24
763K
SEACR_1.0-nonAUC_0.01-GATA1_CD34_Day7_30min-GSM2805377.auc.threshold.merge.bed.gz
2019-04-22 03:23
557K
SEACR_1.0-nonAUC_0.01-GATA1_CD34_Day9_30min-GSM2805378.auc.threshold.merge.bed.gz
2019-04-22 03:23
494K
SEACR_1.0-nonAUC_0.01-GATA1_HUDEP2_rep1_30min-GSM2805375.auc.threshold.merge.bed.gz
2019-04-22 03:25
1.3M
SEACR_1.0-nonAUC_0.01-GATA1_HUDEP2_rep2_30min-GSM2805376.auc.threshold.merge.bed.gz
2019-04-22 03:24
952K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a-vs-ChIP-intersection1-vs-motifs-intersection1.gz
2019-04-22 11:22
61K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a-vs-ChIP-intersection1-vs-motifs-outersection1.gz
2019-04-22 11:22
63K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a-vs-ChIP-intersection1.gz
2019-04-22 11:05
122K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a-vs-ChIP-outersection1-vs-motifs-intersection1.gz
2019-04-22 11:23
67K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a-vs-ChIP-outersection1-vs-motifs-outersection1.gz
2019-04-22 11:23
272K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a-vs-ChIP-outersection1.gz
2019-04-22 11:05
336K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.maxFL120bp-vs-ChIP-intersection1-vs-motifs-intersection1.gz
2019-04-22 11:22
26K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.maxFL120bp-vs-ChIP-intersection1-vs-motifs-outersection1.gz
2019-04-22 11:22
36K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.maxFL120bp-vs-ChIP-intersection1.gz
2019-04-22 11:05
61K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.maxFL120bp-vs-ChIP-outersection1-vs-motifs-intersection1.gz
2019-04-22 11:22
8.8K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.maxFL120bp-vs-ChIP-outersection1-vs-motifs-outersection1.gz
2019-04-22 11:22
102K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.maxFL120bp-vs-ChIP-outersection1.gz
2019-04-22 11:05
110K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.minFL150bp-vs-ChIP-intersection1-vs-motifs-intersection1.gz
2019-04-22 11:22
36K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.minFL150bp-vs-ChIP-intersection1-vs-motifs-outersection1.gz
2019-04-22 11:22
37K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.minFL150bp-vs-ChIP-intersection1.gz
2019-04-22 11:05
71K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.minFL150bp-vs-ChIP-outersection1-vs-motifs-intersection1.gz
2019-04-22 11:22
36K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.minFL150bp-vs-ChIP-outersection1-vs-motifs-outersection1.gz
2019-04-22 11:22
155K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_a.minFL150bp-vs-ChIP-outersection1.gz
2019-04-22 11:05
188K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_b-vs-ChIP-intersection1-vs-motifs-intersection1.gz
2019-04-22 11:23
62K
SEACR_1.0-nonAUC_0.01-NF_Gata1_250_b-vs-ChIP-intersection1-vs-motifs-outersection1.gz
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