#Uploaded_variation	Chrom	Pos	Allele	Gene	Feature	Feature_type	Consequence	cDNA_position	CDS_position	Protein_position	Amino_acids	Codons	Existing_variation	Extra	Human	Archaics_(AltaiNea,Denisova)	Ancestor	Gorilla	Orangutan	States	dbSNP	Human_1000G(Global)	Flag	GERP_score	Mammal_score	Primate_score	B_score	Mappability_score	VCF_info	VCF_format	VCF_values	Strand
X_2793951_T/C	X	2793951	C	ENSG00000056998	ENST00000338623	Transcript	NON_SYNONYMOUS_CODING	1514	1232	411	T/I	aCc/aTc	-	ENSP=ENSP00000341273;PolyPhen=benign(0);SIFT=tolerated(0.76);HGNC=GYG2	T	T/T,C/C	C	C	C	H/H,A/A	rs148872483	1.0	.	-0.852	.	0.340	.	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;DP=78;GAnc=C;GRP=-0.852;HRun;MQ=39.34;MQ0=0;Map20=1;OAnc=C;TS=HPGOC;TSseq=T,C,C,C,C;pSC=0.340	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:50:99:0,107,1874:0,1:0,0:0,0:24,25:0:39.34:0;1/1:28:84.27:1109,84,0:0,0:12,16:0,0:0,0:0:37.00:0	+
X_9707609_T/C	X	9707609	C	ENSG00000101850	ENST00000380929	Transcript	NON_SYNONYMOUS_CODING	1184	1096	366	V/M	Gtg/Atg	-	ENSP=ENSP00000370316;PolyPhen=benign(0.001);SIFT=tolerated(0.7);HGNC=GPR143	T	C/C,C/C	C	C	CCCGGGAGTC	A/A,A/A	rs34324958	0.99	.	.	.	0.025	.	.	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AN=4;BaseQRankSum=0.866;CAnc=C;DP=50;Dels=0.00;FS=4.260;GAnc=C;HRun;HaplotypeScore=0.9997;MQ=38.84;MQ0=0;MQRankSum=1.083;OAnc=CCCGGGAGTC;QD=35.32;ReadPosRankSum=-0.975;TS=HPGOMC;TSseq=T,-,C,CCTGGGAGTC,CCCGGGAGTC,CGCGGGAGTC;pSC=0.025	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:56.29:1163,56,0:0,0:11,20:0,0:1,0:0:38.84:0;1/1:18:54.15:702,54,0:0,0:9,9:0,0:0,0:0:37.00:0	-
X_9900586_G/C	X	9900586	C	ENSG00000146950	ENST00000380913	Transcript	NON_SYNONYMOUS_CODING	3353	3263	1088	A/G	gCc/gGc	-	ENSP=ENSP00000370299;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SHROOM2	G	C/C,C/C	C	C	C	A/A,A/A	rs61744805	0.99	.	0.139	.	0.002	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.00;AN=4;CAnc=C;DP=56;Dels=0.00;FS=0.000;GAnc=C;GRP=0.139;HRun;HaplotypeScore=0.0000;MQ=36.90;MQ0=0;Map20=1;OAnc=C;QD=38.45;TS=HPGOM;TSseq=G,C,C,C,C;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1533,117,0:0,0:16,23:0,0:0,0:0:36.90:0;1/1:17:51.15:654,51,0:0,0:11,6:0,0:0,0:0:37.00:0	+
X_9935582_G/A	X	9935582	A	ENSG00000234469	ENST00000445307	Transcript	NON_SYNONYMOUS_CODING	191	191	64	H/R	cAt/cGt	-	ENSP=ENSP00000403980;PolyPhen=benign(0);SIFT=tolerated(1)	G	G/G,A/A	A	A	A	H/H,A/A	rs73478919	0.96	CpG	-4.6	0.000	0.045	.	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.17;AMR_AF=0.02;AN=4;CAnc=A;CpG;DP=94;GAnc=A;GRP=-4.6;HRun=0;MQ=39.34;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,N,A,-,A,A;mSC=0.000;pSC=0.045	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:50:99:0,141,1846:0,2:0,0:23,25:0,0:0:39.34:0;1/1:44:99:1750,132,0:21,23:0,0:0,0:0,0:0:36.77:0	+
X_16170624_G/C	X	16170624	C	ENSG00000126010	ENST00000535371	Transcript	NON_SYNONYMOUS_CODING	1041	376	126	P/A	Cct/Gct	-	ENSP=ENSP00000442239;PolyPhen=benign(0.012);SIFT=deleterious(0.03);HGNC=GRPR	G	G/G,C/C	C	C	C	H/H,A/A	rs34159776	0.99	.	1.5	0.693	0.953	.	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;CAnc=C;DP=73;GAnc=C;GRP=1.5;HRun;MQ=37.68;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;mSC=0.693;pSC=0.953	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:44:99:0,132,1734:0,0:0,0:14,29:0,0:0:37.68:0;1/1:29:87.28:1140,87,0:0,0:16,13:0,0:0,0:0:37.00:0	+
X_18221746_A/C	X	18221746	C	ENSG00000177324	ENST00000380030	Transcript	NON_SYNONYMOUS_CODING	936	782	261	G/V	gGt/gTt	-	ENSP=ENSP00000369369;PolyPhen=benign(0);SIFT=tolerated(0.65);HGNC=BEND2	A	C/C,C/C	C	C	C	A/A,A/A	rs74391498	0.98	.	0.0837	.	0.190	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.03;AN=4;CAnc=C;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=0.0837;HRun;HaplotypeScore=0.9997;MQ=37.77;MQ0=0;Map20=1;OAnc=C;QD=37.99;TS=HPGOMC;TSseq=A,C,C,C,C,C;pSC=0.190	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1515,117,0:0,0:16,23:0,0:0,0:0:37.77:0;1/1:24:72.24:956,72,0:0,0:13,11:0,0:0,0:0:37.00:0	-
X_23018359_T/C	X	23018359	C	ENSG00000184735	ENST00000327968	Transcript	NON_SYNONYMOUS_CODING	273	185	62	A/V	gCg/gTg	-	ENSP=ENSP00000368667;PolyPhen=benign(0.017);SIFT=tolerated(0.88);HGNC=DDX53	T	C/C,C/C	C	C	C	A/A,A/A	rs4412516	0.95	CpG	-4.13	0.000	0.393	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.22;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=81;Dels=0.00;EUR_AF=0.00;FS=0.000;GAnc=C;GRP=-4.13;HRun=0;HaplotypeScore=0.0000;MQ=39.13;MQ0=0;Map20=1;OAnc=C;QD=39.20;TS=HPGOMC;TSseq=T,C,C,C,N,-;mSC=0.000;pSC=0.393	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2189,166,0:0,0:33,22:0,0:0,0:0:39.13:0;1/1:26:38.24:945,38,0:0,0:12,13:0,0:1,0:0:37.00:0	+
X_23018785_C/T	X	23018785	T	ENSG00000184735	ENST00000327968	Transcript	NON_SYNONYMOUS_CODING	699	611	204	M/T	aTg/aCg	-	ENSP=ENSP00000368667;PolyPhen=benign(0.012);SIFT=tolerated(0.53);HGNC=DDX53	C	T/T,T/T	T	T	T	A/A,A/A	.	1	CpG	-6.7	0.000	0.281	.	1	AC=4;AF=1.00;AN=4;CAnc=T;CpG;DP=85;Dels=0.00;FS=0.000;GAnc=T;GRP=-6.7;HRun=0;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;Map20=1;OAnc=T;QD=36.68;TS=HPGOMC;TSseq=C,T,T,T,T,-;mSC=0.000;pSC=0.281	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1794,135,0:0,0:0,0:0,0:30,18:0:38.84:0;1/1:37:99:1454,111,0:0,0:0,0:0,0:20,17:0:37.00:0	+
X_36156570_G/A	X	36156570	A	ENSG00000176034	ENST00000313548	Transcript	NON_SYNONYMOUS_CODING	1435	1249	417	M/V	Atg/Gtg	-	ENSP=ENSP00000324767;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CXorf59	G	A/A,A/A	A	A	A	A/A,A/A	.	1	CpG	2.56	0.032	0.197	.	1	AC=4;AF=1.00;AN=4;CAnc=A;CpG;DP=98;Dels=0.00;FS=0.000;GAnc=A;GRP=2.56;HRun=0;HaplotypeScore=0.0000;MQ=39.73;MQ0=0;Map20=1;OAnc=A;QD=37.65;TS=HPGOMC;TSseq=G,A,A,A,A,A;mSC=0.032;pSC=0.197	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2442,190,0:31,31:0,0:0,0:0,0:0:39.73:0;1/1:34:99:1347,102,0:11,23:0,0:0,0:0,0:0:37.00:0	+
X_38182130_T/C	X	38182130	C	ENSG00000156313	ENST00000309513	Transcript	NON_SYNONYMOUS_CODING	391	223	75	V/I	Gtc/Atc	-	ENSP=ENSP00000308783;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RPGR	T	C/C,C/C	C	-	C	A/A,A/A	rs111631988	0.98	CpG	-1.4	0.000	0.231	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=76;Dels=0.00;EUR_AF=0.01;FS=0.000;GRP=-1.4;HRun=0;HaplotypeScore=0.0000;MQ=37.58;MQ0=0;Map20=1;OAnc=C;QD=38.59;TS=HPOMC;TSseq=T,C,C,T,C;mSC=0.000;pSC=0.231	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2040,156,0:0,0:22,30:0,0:0,0:0:37.58:0;1/1:24:32.23:875,32,0:0,0:10,13:0,0:1,0:0:37.00:0	-
X_47082520_A/G	X	47082520	G	ENSG00000102225	ENST00000276052	Transcript	NON_SYNONYMOUS_CODING	104	26	9	G/D	gGc/gAc	-	ENSP=ENSP00000276052;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CDK16	A	G/G,G/G	G	G	G	A/A,A/A	rs5953015	0.91	.	2.2	.	0.124	.	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.38;AMR_AF=0.04;AN=4;CAnc=G;DP=66;Dels=0.00;FS=0.000;GAnc=G;GRP=2.2;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.41;TS=HPGOC;TSseq=A,G,G,G,G;pSC=0.124	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1641,126,0:0,0:0,0:19,24:0,0:0:37.00:0;1/1:23:69.21:899,69,0:0,0:0,0:12,11:0,0:0:37.00:0	+
X_49137916_T/C	X	49137916	C	ENSG00000049769	ENST00000055335	Transcript	NON_SYNONYMOUS_CODING	1068	1052	351	S/F	tCt/tTt	-	ENSP=ENSP00000055335;PolyPhen=benign(0);SIFT=tolerated(0.28);HGNC=PPP1R3F	T	C/C,C/C	C	C	C	A/A,A/A	rs17148347	0.94	.	2.64	0.251	0.248	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.24;AMR_AF=0.04;AN=4;CAnc=C;DP=78;Dels=0.00;FS=0.000;GAnc=C;GRP=2.64;HRun=0;HaplotypeScore=0.0000;MQ=37.54;MQ0=0;Map20=1;OAnc=C;QD=38.57;TS=HPGOMC;TSseq=T,C,C,C,C,C;mSC=0.251;pSC=0.248	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2154,166,0:0,0:32,23:0,0:0,0:0:37.54:0;1/1:23:69.22:901,69,0:0,0:10,13:0,0:0,0:0:37.00:0	+
X_64137723_A/T	X	64137723	T	ENSG00000126970	ENST00000447788	Transcript	NON_SYNONYMOUS_CODING	608	452	151	Y/F	tAt/tTt	-	ENSP=ENSP00000399126;PolyPhen=unknown(0);SIFT=tolerated(0.18);HGNC=ZC4H2	A	T/T,T/T	T	T	T	A/A,A/A	rs6653206	0.93	.	0.785	1.000	0.858	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.30;AMR_AF=0.04;AN=4;CAnc=T;DP=77;Dels=0.00;FS=0.000;GAnc=T;GRP=0.785;HRun=0;HaplotypeScore=1.9810;MQ=39.43;MQ0=0;Map20=1;OAnc=T;QD=36.19;TS=HPGOMC;TSseq=A,T,T,T,T,C;mSC=1.000;pSC=0.858	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1625,126,0:0,0:0,0:0,0:20,22:0:39.43:0;1/1:33:96.31:1263,96,0:0,0:0,1:0,0:13,19:0:37.00:0	-
X_65474885_G/C	X	65474885	C	ENSG00000089472	ENST00000336279	Transcript	NON_SYNONYMOUS_CODING	2609	1771	591	L/V	Ctc/Gtc	-	ENSP=ENSP00000337418;PolyPhen=benign(0.001);SIFT=tolerated(0.69);HGNC=HEPH	G	C/C,G/G	C	C	C	A/A,H/H	.	1.0	.	2.32	.	0.576	.	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;DP=65;Dels=0.00;FS=0.000;GAnc=C;GRP=2.32;HRun=0;HaplotypeScore=0.0000;MQ=38.44;MQ0=0;Map20=1;OAnc=C;QD=37.63;TS=HPGOMC;TSseq=G,C,C,C,C,C;pSC=0.576	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1576,123,0:0,0:20,21:0,0:0,0:0:38.44:0;0/0:24:72.22:0,72,926:0,0:0,0:11,13:0,0:0:37.00:0	+
X_69353856_G/A	X	69353856	A	ENSG00000089289	ENST00000342206	Transcript	NON_SYNONYMOUS_CODING	558	59	20	K/R	aAa/aGa	-	ENSP=ENSP00000363661;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=IGBP1	G	A/A,A/A	A	A	A	A/A,A/A	rs6625580	0.97	.	-1.62	0.021	0.012	.	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.15;AMR_AF=0.00;AN=4;CAnc=A;DP=68;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.62;HRun;HaplotypeScore=0.9997;MQ=38.10;MQ0=0;Map20=1;OAnc=A;QD=37.41;TS=HPGOMC;TSseq=G,A,A,A,A,A;mSC=0.021;pSC=0.012	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1904,144,0:27,23:0,0:0,0:0,0:0:38.10:0;1/1:18:54.18:714,54,0:11,7:0,0:0,0:0,0:0:37.00:0	+
X_76939325_G/C	X	76939325	C	ENSG00000085224	ENST00000373344	Transcript	NON_SYNONYMOUS_CODING	1638	1423	475	D/H	Gat/Cat	-	ENSP=ENSP00000362441;PolyPhen=benign(0);HGNC=ATRX	G	C/C,C/C	C	C	C	A/A,A/A	.	1	.	.	.	.	.	.	AC=4;AF=1.00;AN=4;CAnc=C;DP=81;Dels=0.00;FS=0.000;GAnc=C;HRun;HaplotypeScore=1.8319;MQ=37.00;MQ0=0;OAnc=C;QD=38.44;TS=HPGOMC;TSseq=G,-,C,A,C,C	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2032,156,0:0,0:21,31:0,0:0,0:0:37.00:0;1/1:29:87.28:1145,87,0:0,0:14,15:0,0:0,0:0:37.00:0	-
X_101857535_A/G	X	101857535	G	ENSG00000125962	ENST00000246174	Transcript	NON_SYNONYMOUS_CODING	1347	466	156	A/T	Gcc/Acc	-	ENSP=ENSP00000246174;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ARMCX5	A	G/G,G/G	G	G	G	A/A,A/A	rs35450554	0.99	.	0.589	0.000	0.923	.	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;ASN_AF=0.00;CAnc=G;DP=87;Dels=0.00;FS=0.000;GAnc=G;GRP=0.589;HRun;HaplotypeScore=0.0000;MQ=37.66;MQ0=0;Map20=1;OAnc=G;QD=37.75;TS=HPGOMC;TSseq=A,G,G,G,G,T;mSC=0.000;pSC=0.923	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1732,135,0:0,0:0,0:29,16:0,0:0:37.66:0;1/1:42:99:1635,126,0:0,0:0,0:20,22:0,0:0:37.00:0	+
X_109696174_C/T	X	109696174	T	ENSG00000243978	ENST00000465301	Transcript	NON_SYNONYMOUS_CODING	2575	2329	777	S/P	Tct/Cct	-	ENSP=ENSP00000419786;PolyPhen=benign(0);SIFT=tolerated(0.62);HGNC=RGAG1	C	T/T,T/T	T	T	T	A/A,A/A	rs35495390	0.99	.	2.86	0.000	0.472	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.00;AN=4;BaseQRankSum=-1.024;CAnc=T;DP=72;Dels=0.00;FS=3.424;GAnc=T;GRP=2.86;HRun=0;HaplotypeScore=1.9995;MQ=37.66;MQ0=0;MQRankSum=0.709;Map20=1;OAnc=T;QD=35.96;ReadPosRankSum=-1.260;TS=HPGOMC;TSseq=C,T,T,T,T,T;mSC=0.000;pSC=0.472	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:92.42:1651,92,0:0,0:0,1:0,0:25,19:0:37.66:0;1/1:27:81.27:1076,81,0:0,0:0,0:0,0:15,12:0:37.00:0	+
X_114424953_T/C	X	114424953	C	ENSG00000175718	ENST00000424776	Transcript	NON_SYNONYMOUS_CODING	991	949	317	R/W	Cgg/Tgg	-	ENSP=ENSP00000417451;PolyPhen=benign(0);SIFT=tolerated(0.97);HGNC=RBMXL3	T	T/T,C/C	C	C	C	H/H,A/A	rs181636427	1.0	CpG	0.869	0.001	0.004	.	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;CpG;DP=52;GAnc=C;GRP=0.869;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;mSC=0.001;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,123,1613:0,0:0,0:0,0:16,26:0:37.00:0;1/1:10:30.09:380,30,0:0,0:5,5:0,0:0,0:0:37.00:0	+
X_118215366_T/C	X	118215366	C	ENSG00000250423	ENST00000402510	Transcript	NON_SYNONYMOUS_CODING	5056	5056	1686	V/I	Gtt/Att	-	ENSP=ENSP00000384670;PolyPhen=benign(0);SIFT=tolerated(0.6);HGNC=KIAA1210	T	T/T,C/C	C	C	C	H/H,A/A	rs188422442	1.0	.	-1.39	0.000	0.428	.	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=89;GAnc=C;GRP=-1.39;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;mSC=0.000;pSC=0.428	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,157,2055:0,0:0,0:0,0:15,34:0:37.00:0;1/1:37:99:1446,111,0:0,0:25,12:0,0:0,0:0:37.00:0	-
X_119693637_C/T	X	119693637	T	ENSG00000158290	ENST00000371323	Transcript	NON_SYNONYMOUS_CODING	162	19	7	T/A	Aca/Gca	-	ENSP=ENSP00000360374;PolyPhen=benign(0.001);SIFT=tolerated(0.05);HGNC=CUL4B	C	T/T,T/T	T	T	T	A/A,A/A	rs113213082	0.93	RM	4.24	1.000	0.938	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.26;AMR_AF=0.04;AN=4;ASN_AF=0.02;CAnc=T;DP=85;Dels=0.00;FS=0.000;GAnc=T;GRP=4.24;HRun=0;HaplotypeScore=1.9891;MQ=39.03;MQ0=0;Map20=1;OAnc=T;QD=36.79;RM;TS=HPGOMC;TSseq=C,T,T,T,T,T;mSC=1.000;pSC=0.938	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1983,150,0:0,0:0,0:0,0:28,24:0:39.03:0;1/1:32:96.31:1271,96,0:0,0:0,0:0,0:15,17:0:37.00:0	-
X_131212487_G/C	X	131212487	C	ENSG00000165694	ENST00000298542	Transcript	NON_SYNONYMOUS_CODING	1734	1558	520	D/H	Gat/Cat	-	ENSP=ENSP00000298542;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FRMD7	G	C/C,C/C	C	C	C	A/A,A/A	rs61742429	1.0	.	3.59	0.990	0.096	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=76;Dels=0.00;FS=0.000;GAnc=C;GRP=3.59;HRun=0;HaplotypeScore=1.9995;MQ=37.79;MQ0=0;Map20=1;OAnc=C;QD=38.52;TS=HPGOMC;TSseq=G,C,C,C,C,C;mSC=0.990;pSC=0.096	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1497,114,0:0,0:19,18:0,0:0,0:0:37.79:0;1/1:38:99:1481,114,0:0,0:15,23:0,0:0,0:0:37.00:0	-
X_132161755_A/G	X	132161755	G	ENSG00000134588	ENST00000370832	Transcript	NON_SYNONYMOUS_CODING	546	494	165	S/L	tCg/tTg	-	ENSP=ENSP00000359869;PolyPhen=benign(0);SIFT=tolerated(0.61);HGNC=USP26	A	G/G,G/G	G	G	G	A/A,A/A	rs61741870	0.94	.	1.25	0.000	0.022	.	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.10;AMR_AF=0.01;AN=4;ASN_AF=0.12;BaseQRankSum=0.517;CAnc=G;DP=90;Dels=0.00;EUR_AF=0.01;FS=2.941;GAnc=G;GRP=1.25;HRun=0;HaplotypeScore=0.9997;MQ=39.13;MQ0=0;MQRankSum=-0.247;Map20=1;OAnc=G;QD=35.03;ReadPosRankSum=-0.247;TS=HPGOMC;TSseq=A,G,G,G,G,A;mSC=0.000;pSC=0.022	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:82.51:1960,83,0:0,2:0,0:21,31:0,0:0:39.13:0;1/1:35:99:1388,105,0:0,0:0,0:13,22:0,0:0:37.00:0	-
X_132352230_C/G	X	132352230	G	ENSG00000183434	ENST00000310125	Transcript	NON_SYNONYMOUS_CODING	147	58	20	Q/E	Cag/Gag	-	ENSP=ENSP00000385461;PolyPhen=benign(0.005);SIFT=tolerated(1);HGNC=TFDP3	C	G/G,G/G	G	G	G	A/A,A/A	rs28455963	0.91	CpG	0.235	.	0.070	.	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.29;AMR_AF=0.06;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=58;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=0.235;HRun;HaplotypeScore=0.0000;MQ=37.88;MQ0=0;Map20=1;OAnc=G;QD=38.65;TS=HPGOMC;TSseq=C,G,G,G,G,G;pSC=0.070	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1347,102,0:0,0:0,0:22,12:0,0:0:37.88:0;1/1:24:69.22:893,69,0:0,0:0,0:12,11:1,0:0:36.58:0	-
X_147011480_G/T	X	147011480	T	ENSG00000102081	ENST00000218200	Transcript	NON_SYNONYMOUS_CODING	662	433	145	S/A	Tcg/Gcg	-	ENSP=ENSP00000218200;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FMR1	G	T/T,T/T	T	T	T	A/A,A/A	rs29281	0.98	.	4.06	0.853	0.211	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.00;AN=4;CAnc=T;DP=75;Dels=0.00;FS=0.000;GAnc=T;GRP=4.06;HRun=0;HaplotypeScore=3.9316;MQ=39.42;MQ0=0;Map20=1;OAnc=T;QD=37.11;TS=HPGOMC;TSseq=G,T,T,T,T,T;mSC=0.853;pSC=0.211	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1963,153,0:0,0:0,0:0,0:22,29:0:39.42:0;1/1:23:66.21:859,66,0:0,0:0,0:0,0:11,12:0:37.00:0	+
X_149639359_T/C	X	149639359	C	ENSG00000013619	ENST00000262858	Transcript	NON_SYNONYMOUS_CODING	1577	1514	505	A/V	gCg/gTg	-	ENSP=ENSP00000262858;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MAMLD1	T	C/C,C/C	C	C	C	A/A,A/A	rs61740566	0.95	CpG	1.76	0.001	0.826	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.21;AMR_AF=0.00;AN=4;CAnc=C;CpG;DP=67;Dels=0.00;FS=0.000;GAnc=C;GRP=1.76;HRun=0;HaplotypeScore=0.0000;MQ=37.77;MQ0=0;Map20=1;OAnc=C;QD=38.39;TS=HPGOMC;TSseq=T,C,C,C,C,C;mSC=0.001;pSC=0.826	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1530,117,0:0,0:19,20:0,0:0,0:0:37.77:0;1/1:28:44.27:1040,44,0:0,0:14,13:0,0:1,0:0:37.00:0	+
X_151092932_A/G	X	151092932	G	ENSG00000147381	ENST00000276344	Transcript	NON_SYNONYMOUS_CODING	1014	796	266	D/N	Gat/Aat	-	ENSP=ENSP00000276344;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MAGEA4	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	0.425	0.036	0.049	.	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=67;GAnc=G;GRP=0.425;HRun=0;MQ=37.25;MQ0=2;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;mSC=0.036;pSC=0.049	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:46:99:0,135,1764:29,16:0,0:0,0:0,0:0:37.25:1;1/1:21:60.18:774,60,0:0,0:0,0:7,14:0,0:0:35.46:1	+
X_151123340_G/C	X	151123340	C	ENSG00000102287	ENST00000370328	Transcript	NON_SYNONYMOUS_CODING	1408	1354	452	G/R	Ggt/Cgt	-	ENSP=ENSP00000359353;PolyPhen=benign(0);SIFT=tolerated(0.47);HGNC=GABRE	G	G/G,C/C	C	C	C	H/H,A/A	rs61730044	1.0	CpG	1.05	.	0.145	.	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=67;GAnc=C;GRP=1.05;HRun;MQ=37.68;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,G;pSC=0.145	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:44:92.42:0,92,1656:0,1:0,0:18,25:0,0:0:37.68:0;1/1:23:69.21:894,69,0:0,0:9,14:0,0:0,0:0:37.00:0	-
X_151138744_T/G	X	151138744	G	ENSG00000102287	ENST00000370325	Transcript	NON_SYNONYMOUS_CODING	241	187	63	R/S	Cgc/Agc	-	ENSP=ENSP00000359350;PolyPhen=benign(0);SIFT=tolerated(0.76);HGNC=GABRE	T	G/G,T/T	G	G	G	A/A,H/H	rs140879781	1.0	CpG	.	.	.	.	.	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;CpG;DP=97;Dels=0.00;FS=0.000;GAnc=G;HRun=0;HaplotypeScore=2.9660;MQ=37.92;MQ0=0;OAnc=G;QD=37.77;TS=HPGOMC;TSseq=T,-,G,G,G,G	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2337,181,0:0,1:0,0:28,32:0,0:0:37.92:0;0/0:36:99:0,108,1395:0,0:0,0:0,0:20,16:0:36.72:0	-
X_152088888_G/A	X	152088888	A	ENSG00000147394	ENST00000318504	Transcript	NON_SYNONYMOUS_CODING	595	547	183	S/G	Agt/Ggt	-	ENSP=ENSP00000312782;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZNF185	G	G/G,A/A	A	A	A	H/H,A/A	.	1	CpG	4.23	0.990	0.417	.	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=63;GAnc=A;GRP=4.23;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;mSC=0.990;pSC=0.417	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,111,1469:0,0:0,0:15,22:0,0:0:37.00:0;1/1:26:75.24:985,75,0:13,13:0,0:0,0:0,0:0:37.00:0	+
X_152128250_A/G	X	152128250	G	ENSG00000147394	ENST00000318504	Transcript	NON_SYNONYMOUS_CODING	1285	1237	413	A/T	Gct/Act	-	ENSP=ENSP00000312782;PolyPhen=benign(0);SIFT=tolerated(0.72);HGNC=ZNF185	A	G/G,G/G	G	G	G	A/A,A/A	.	1	.	-0.475	0.000	0.051	.	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=78;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.475;HRun;HaplotypeScore=1.9467;MQ=37.97;MQ0=0;Map20=1;OAnc=G;QD=38.39;TS=HPGOMC;TSseq=A,G,G,G,G,G;mSC=0.000;pSC=0.051	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1991,153,0:0,0:0,0:15,36:0,0:0:37.97:0;1/1:27:81.26:1068,81,0:0,0:0,0:13,14:0,0:0:36.58:0	+
X_153543608_G/A	X	153543608	A	ENSG00000007350	ENST00000217905	Transcript	NON_SYNONYMOUS_CODING	399	170	57	K/R	aAg/aGg	-	ENSP=ENSP00000217905;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TKTL1	G	A/A,A/A	A	A	A	A/A,A/A	rs111811311	1.0	.	4.2	0.983	.	.	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=A;DP=98;Dels=0.00;FS=0.000;GAnc=A;GRP=4.2;HRun;HaplotypeScore=2.6279;MQ=38.96;MQ0=0;Map20=1;OAnc=A;QD=36.29;TS=HPGOMC;TSseq=G,A,A,A,A,A;mSC=0.983	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2029,156,0:26,28:0,0:0,0:0,0:0:38.96:0;1/1:43:99:1657,126,0:24,19:0,0:0,0:0,0:0:37.00:0	+
1_1120488_A/C	1	1120488	C	ENSG00000162571	ENST00000379288	Transcript	NON_SYNONYMOUS_CODING	1358	1181	394	T/K	aCg/aAg	-	ENSP=ENSP00000368590;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TTLL10	A	C/C,C/C	C	C	C	A/A,A/A	rs74475385	0.99	CpG	4.54	1.000	0.103	878	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=4.54;HRun=0;HaplotypeScore=2.8821;MQ=37.42;MQ0=0;Map20=1;OAnc=C;QD=38.54;TS=HPGOM;TSseq=A,C,C,C,C;bSC=878;mSC=1.000;pSC=0.103	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1883,144,0:0,0:20,27:0,0:0,0:0:37.42:0;1/1:22:66.19:862,66,0:0,0:9,13:0,0:0,0:0:37.00:0	+
1_1354717_C/G	1	1354717	G	ENSG00000235098	ENST00000427211	Transcript	NON_SYNONYMOUS_CODING	1059	422	141	S/C	tCc/tGc	-	ENSP=ENSP00000428419;PolyPhen=unknown(0);HGNC=ANKRD65	C	G/G,C/C	G	G	G	A/A,H/H	rs147239403	1.0	.	.	.	.	814	.	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;BaseQRankSum=1.191;CAnc=G;DP=44;Dels=0.00;FS=3.590;GAnc=G;HRun;HaplotypeScore=0.9983;MQ=37.93;MQ0=0;MQRankSum=0.758;OAnc=G;QD=35.59;ReadPosRankSum=-1.300;TS=HPGOMC;TSseq=C,-,G,G,G,-;bSC=814	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:62.87:1172,63,0:0,0:1,0:12,18:0,0:0:37.93:0;0/0:12:36.08:0,36,447:0,0:6,6:0,0:0,0:0:37.00:0	-
1_6305201_A/C	1	6305201	C	ENSG00000173673	ENST00000377898	Transcript	NON_SYNONYMOUS_CODING	260	195	65	H/Q	caC/caA	-	ENSP=ENSP00000367130;PolyPhen=benign(0);SIFT=tolerated(0.08);HGNC=HES3	A	A/A,C/C	C	C	C	H/H,A/A	rs188463518	0.97	.	2.28	0.856	0.625	786	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.09;AMR_AF=0.02;AN=4;ASN_AF=0.02;CAnc=C;DP=46;EUR_AF=0.01;GAnc=C;GRP=2.28;HRun=2;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,N,-,C,C;bSC=786;mSC=0.856;pSC=0.625	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:30:87.28:0,87,1143:14,15:0,0:0,0:0,0:0:37.00:0;1/1:16:48.15:629,48,0:0,0:7,9:0,0:0,0:0:37.00:0	+
1_6305557_A/G	1	6305557	G	ENSG00000173673	ENST00000377898	Transcript	NON_SYNONYMOUS_CODING	616	551	184	G/D	gGc/gAc	-	ENSP=ENSP00000367130;PolyPhen=unknown(0);HGNC=HES3	A	A/A,G/G	G	G	G	H/H,A/A	rs74925124	1.0	.	0.58	0.000	0.260	782	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.02;AN=4;CAnc=G;DP=50;GAnc=G;GRP=0.58;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,N,-,G,G;bSC=782;mSC=0.000;pSC=0.260	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,111,1470:20,17:0,0:0,0:0,0:0:37.00:0;1/1:13:39.11:503,39,0:0,0:0,0:7,6:0,0:0:37.00:0	+
1_6309571_A/C	1	6309571	C	ENSG00000158292	ENST00000377893	Transcript	NON_SYNONYMOUS_CODING	1917	1657	553	A/S	Gct/Tct	-	ENSP=ENSP00000367125;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GPR153	A	A/A,C/C	C	C	C	H/H,A/A	.	1	CpG	-5.2	0.000	0.014	788	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=32;GAnc=C;GRP=-5.2;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,-,C,C;bSC=788;mSC=0.000;pSC=0.014	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:21:63.21:0,63,840:10,11:0,0:0,0:0,0:0:37.00:0;1/1:11:33.10:430,33,0:0,0:6,5:0,0:0,0:0:36.07:0	-
1_6700050_T/C	1	6700050	C	ENSG00000007923	ENST00000377573	Transcript	NON_SYNONYMOUS_CODING	1094	895	299	V/M	Gtg/Atg	-	ENSP=ENSP00000366796;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DNAJC11	T	T/T,C/C	C	C	C	H/H,A/A	.	1	CpG	5.05	.	0.943	584	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=90;GAnc=C;GRP=5.05;HRun=0;MQ=38.77;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=584;pSC=0.943	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:61:99:0,175,2242:0,0:0,0:0,0:36,18:0:38.77:0;1/1:29:44.26:1016,44,0:0,0:9,19:0,0:1,0:0:37.39:0	-
1_9034717_A/G	1	9034717	G	ENSG00000131686	ENST00000377442	Transcript	NON_SYNONYMOUS_CODING	701	701	234	R/H	cGt/cAt	-	ENSP=ENSP00000366661;PolyPhen=benign(0);SIFT=tolerated(0.82);HGNC=CA6	A	G/G,A/A	G	G	G	A/A,H/H	rs61749464	1.0	CpG	-6.14	0.000	0.174	923	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;BaseQRankSum=-1.663;CAnc=G;CpG;DP=80;Dels=0.00;FS=0.000;GAnc=G;GRP=-6.14;HRun=0;HaplotypeScore=0.0000;MQ=38.16;MQ0=0;MQRankSum=1.109;Map20=1;OAnc=G;QD=36.44;ReadPosRankSum=1.663;TS=HPGOMC;TSseq=A,G,G,A,G,-;bSC=923;mSC=0.000;pSC=0.174	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1892,110,0:0,1:0,0:22,25:0,0:0:38.16:0;0/0:29:87.28:0,87,1144:17,12:0,0:0,0:0,0:0:37.39:0	+
1_9079301_C/T	1	9079301	T	ENSG00000197241	ENST00000400906	Transcript	NON_SYNONYMOUS_CODING	403	403	135	I/V	Atc/Gtc	-	ENSP=ENSP00000383698;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLC2A7	C	C/C,T/T	T	T	T	H/H,A/A	rs34545462	0.97	CpG	4.46	0.893	0.954	895	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.07;AMR_AF=0.01;AN=4;ASN_AF=0.06;CAnc=T;CpG;DP=70;GAnc=T;GRP=4.46;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=895;mSC=0.893;pSC=0.954	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:86.39:0,86,1568:0,0:27,14:0,0:1,0:0:37.00:0;1/1:28:84.27:1094,84,0:0,0:0,0:0,0:15,13:0:37.00:0	-
1_9324002_A/G	1	9324002	G	ENSG00000049239	ENST00000377403	Transcript	NON_SYNONYMOUS_CODING	1723	1450	484	D/N	Gac/Aac	-	ENSP=ENSP00000366620;PolyPhen=benign(0);SIFT=tolerated(0.62);HGNC=H6PD	A	A/A,G/G	G	G	G	H/H,A/A	rs35404275	0.99	.	3.75	0.772	0.247	840	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=G;DP=74;GAnc=G;GRP=3.75;HRun=2;MQ=37.59;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=840;mSC=0.772;pSC=0.247	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,144,1904:29,22:0,0:0,0:0,0:0:37.59:0;1/1:23:69.23:920,69,0:0,0:0,0:16,7:0,0:0:37.00:0	+
1_11137629_T/C	1	11137629	C	ENSG00000171824	ENST00000544779	Transcript	NON_SYNONYMOUS_CODING	1835	1829	610	R/Q	cGg/cAg	-	ENSP=ENSP00000439473;PolyPhen=benign(0);SIFT=tolerated(0.46);HGNC=EXOSC10	T	C/C,C/C	C	C	C	A/A,A/A	rs2273340	0.96	CpG	-4.11	0.000	0.045	344	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.12;AMR_AF=0.05;AN=4;ASN_AF=0.04;CAnc=C;CpG;DP=68;Dels=0.00;FS=0.000;GAnc=C;GRP=-4.11;HRun=2;HaplotypeScore=3.9926;MQ=38.15;MQ0=0;Map20=1;OAnc=C;QD=38.48;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=344;mSC=0.000;pSC=0.045	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1688,129,0:0,0:23,19:0,0:0,0:0:38.15:0;1/1:25:75.24:984,75,0:0,0:16,9:0,0:0,0:0:37.00:0	-
1_12089946_C/G	1	12089946	G	ENSG00000116691	ENST00000235332	Transcript	NON_SYNONYMOUS_CODING	1009	840	280	Q/H	caG/caC	-	ENSP=ENSP00000235332;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=MIIP	C	G/G,G/G	G	G	G	A/A,A/A	rs117146839	0.99	CpG	0.527	0.991	0.348	764	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.05;CAnc=G;CpG;DP=72;Dels=0.00;FS=0.000;GAnc=G;GRP=0.527;HRun;HaplotypeScore=2.8656;MQ=38.24;MQ0=0;Map20=1;OAnc=G;QD=38.74;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=764;mSC=0.991;pSC=0.348	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1893,144,0:0,0:0,0:25,23:0,0:0:38.24:0;1/1:24:72.22:935,72,0:0,0:0,0:14,10:0,0:0:37.00:0	+
1_13802373_G/A	1	13802373	A	ENSG00000162494	ENST00000376085	Transcript	NON_SYNONYMOUS_CODING	1281	826	276	F/L	Ttc/Ctc	-	ENSP=ENSP00000365253;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LRRC38	G	G/G,A/A	A	-	A	H/H,A/A	rs2940315	0.96	.	5.25	1.000	.	957	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;CAnc=A;DP=42;EUR_AF=0.02;GRP=5.25;HRun;MQ=38.10;MQ0=0;Map20=1;OAnc=A;TS=HPOMC;TSseq=G,A,A,A,A;bSC=957;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:27:81.25:0,81,1052:0,0:0,0:17,10:0,0:0:38.10:0;1/1:15:45.14:587,45,0:4,11:0,0:0,0:0,0:0:37.00:0	-
1_14105639_G/A	1	14105639	A	ENSG00000116731	ENST00000235372	Transcript	NON_SYNONYMOUS_CODING	2205	1349	450	N/S	aAt/aGt	-	ENSP=ENSP00000235372;PolyPhen=benign(0.017);SIFT=tolerated(0.72);HGNC=PRDM2	G	A/A,A/A	A	A	A	A/A,A/A	rs17350795	0.99	.	-10.7	0.000	0.203	448	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=A;DP=75;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=-10.7;HRun;HaplotypeScore=0.0000;MQ=39.00;MQ0=0;Map20=1;OAnc=A;QD=35.97;TS=HPGOMC;TSseq=G,A,A,A,G,A;UR;bSC=448;mSC=0.000;pSC=0.203	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1616,123,0:18,26:0,0:0,0:0,0:0:39.00:0;1/1:31:93.29:1199,93,0:21,10:0,0:0,0:0,0:0:37.00:0	+
1_15639581_A/G	1	15639581	G	ENSG00000142621	ENST00000358897	Transcript	NON_SYNONYMOUS_CODING	1206	1068	356	M/I	atG/atA	-	ENSP=ENSP00000351770;PolyPhen=benign(0.003);SIFT=tolerated(0.93);HGNC=FHAD1	A	G/G,G/G	G	G	-	A/A,A/A	rs10489962	0.95	.	-1.06	0.001	0.934	867	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.09;AMR_AF=0.02;AN=4;ASN_AF=0.03;BaseQRankSum=0.192;CAnc=G;DP=91;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=G;GRP=-1.06;HRun=0;HaplotypeScore=0.9997;MQ=38.64;MQ0=0;MQRankSum=-1.412;Map20=1;QD=37.39;ReadPosRankSum=1.283;TS=HPGC;TSseq=A,G,G,G;UR;bSC=867;mSC=0.001;pSC=0.934	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2052,123,0:0,1:0,0:23,30:0,0:0:38.64:0;1/1:37:99:1467,111,0:0,0:0,0:19,18:0,0:0:37.00:0	+
1_15771121_A/G	1	15771121	G	ENSG00000162438	ENST00000375949	Transcript	NON_SYNONYMOUS_CODING	540	514	172	E/K	Gag/Aag	-	ENSP=ENSP00000365116;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=CTRC	A	G/G,G/G	G	G	G	A/A,A/A	rs34949635	0.97	.	3.22	0.000	.	721	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;BaseQRankSum=-1.733;CAnc=G;DP=53;Dels=0.00;FS=0.000;GAnc=G;GRP=3.22;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-1.251;Map20=1;OAnc=G;QD=35.97;ReadPosRankSum=0.385;TS=HPGOMMC;TSseq=A,G,G,G,G,G,G,G;UR;bSC=721;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:68.34:1328,68,0:0,1:0,0:15,20:0,0:0:37.00:0;1/1:17:48.16:640,48,0:0,0:0,0:6,11:0,0:0:37.00:0	+
1_16459836_A/G	1	16459836	G	ENSG00000142627	ENST00000358432	Transcript	NON_SYNONYMOUS_CODING	2047	1892	631	T/M	aCg/aTg	-	ENSP=ENSP00000351209;PolyPhen=benign(0);SIFT=tolerated(0.27);HGNC=EPHA2	A	A/A,G/G	G	G	G	H/H,A/A	rs34021505	0.98	CpG	3.61	.	0.688	620	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.09;AN=4;CAnc=G;CpG;DP=59;GAnc=G;GRP=3.61;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=620;pSC=0.688	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,114,1506:18,20:0,0:0,0:0,0:0:37.00:0;1/1:21:63.20:820,63,0:0,0:0,0:9,12:0,0:0:37.00:0	-
1_19597289_C/T	1	19597289	T	ENSG00000211454	ENST00000429712	Transcript	NON_SYNONYMOUS_CODING	475	355	119	T/A	Acc/Gcc	-	ENSP=ENSP00000411913;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=AKR7L	C	T/T,C/C	T	T	T	A/A,H/H	.	0.97	CpG	4.19	.	.	444	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.03;AMR_AF=0.12;AN=4;ASN_AF=0.02;CAnc=T;CpG;DP=44;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=4.19;HRun=0;HaplotypeScore=0.0000;MQ=36.49;MQ0=0;Map20=1;OAnc=T;QD=34.19;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=444	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:84.24:1059,84,0:0,0:0,0:0,0:18,12:0:36.49:0;0/0:14:42.13:0,42,539:0,0:8,6:0,0:0,0:0:36.18:0	-
1_19634964_C/G	1	19634964	G	ENSG00000053371	ENST00000235835	Transcript	NON_SYNONYMOUS_CODING	493	471	157	H/Q	caC/caG	-	ENSP=ENSP00000235835;PolyPhen=benign(0.006);SIFT=tolerated(1);HGNC=AKR7A2	C	C/C,G/G	G	G	G	H/H,A/A	rs859208	0.92	.	-1.58	1.000	0.432	588	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.08;AFR_AF=0.29;AMR_AF=0.01;AN=4;ASN_AF=0.03;CAnc=G;DP=52;GAnc=G;GRP=-1.58;HRun;MQ=37.90;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=588;mSC=1.000;pSC=0.432	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:99:0,99,1298:0,0:23,10:0,0:0,0:0:37.90:0;1/1:19:57.19:754,57,0:0,0:0,0:10,9:0,0:0:37.00:0	-
1_19644218_G/A	1	19644218	A	ENSG00000040487	ENST00000375153	Transcript	NON_SYNONYMOUS_CODING	687	47	16	N/S	aAt/aGt	-	ENSP=ENSP00000364295;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PQLC2	G	G/G,A/A	A	A	A	H/H,A/A	rs12140547	0.95	.	5.39	0.983	0.919	658	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.13;AMR_AF=0.02;AN=4;CAnc=A;DP=62;EUR_AF=0.04;GAnc=A;GRP=5.39;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,-,A,A;UR;bSC=658;mSC=0.983;pSC=0.919	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,114,1503:0,0:0,0:20,18:0,0:0:37.00:0;1/1:24:72.24:954,72,0:12,12:0,0:0,0:0,0:0:37.00:0	+
1_22168801_T/C	1	22168801	C	ENSG00000142798	ENST00000374695	Transcript	NON_SYNONYMOUS_CODING	9063	8983	2995	G/S	Ggc/Agc	-	ENSP=ENSP00000363827;PolyPhen=benign(0.001);SIFT=tolerated(0.71);HGNC=HSPG2	T	C/C,T/T	C	C	C	A/A,H/H	rs2229491	0.92	CpG	1	0.000	0.012	588	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.08;AFR_AF=0.20;AMR_AF=0.06;AN=4;CAnc=C;CpG;DP=64;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=1;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.77;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=588;mSC=0.000;pSC=0.012	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1808,138,0:0,1:29,16:0,0:0,0:0:37.00:0;0/0:17:51.17:0,51,680:0,0:0,0:0,0:13,4:0:37.00:0	-
1_22168845_A/T	1	22168845	T	ENSG00000142798	ENST00000374695	Transcript	NON_SYNONYMOUS_CODING	9019	8939	2980	H/L	cAc/cTc	-	ENSP=ENSP00000363827;PolyPhen=benign(0.003);SIFT=tolerated(0.72);HGNC=HSPG2	A	T/T,A/A	T	T	T	A/A,H/H	rs2229489	0.98	.	4.95	0.681	0.342	588	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.02;AMR_AF=0.03;AN=4;BaseQRankSum=0.446;CAnc=T;DP=57;Dels=0.00;EUR_AF=0.05;FS=3.854;GAnc=T;GRP=4.95;HRun=0;HaplotypeScore=3.9305;MQ=37.00;MQ0=0;MQRankSum=0.941;Map20=1;OAnc=T;QD=31.29;ReadPosRankSum=1.634;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=588;mSC=0.681;pSC=0.342	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:62.32:1253,62,0:1,0:0,0:0,0:17,20:0:37.00:0;0/0:18:54.17:0,54,704:8,10:0,0:0,0:0,0:0:37.00:0	-
1_22206649_T/C	1	22206649	C	ENSG00000142798	ENST00000374695	Transcript	NON_SYNONYMOUS_CODING	2374	2294	765	N/S	aAt/aGt	-	ENSP=ENSP00000363827;PolyPhen=benign(0.021);SIFT=tolerated(0.16);HGNC=HSPG2	C	T/T,C/C	T	T	T	A/A,H/H	rs989994	0.95	.	5.38	0.994	0.945	598	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.95;AFR_AF=0.78;AMR_AF=0.98;AN=4;ASN_AF=1.00;CAnc=T;DP=56;EUR_AF=1.00;GAnc=T;GRP=5.38;HRun=0;MQ=38.60;MQ0=0;Map20=1;OAnc=T;TS=HPGO;TSseq=T,T,T,T;bSC=598;mSC=0.994;pSC=0.945	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,111,1450:0,0:0,0:0,0:21,16:0:38.60:0;1/1:19:54.18:713,54,0:0,0:8,11:0,0:0,0:0:37.00:0	-
1_23418576_T/C	1	23418576	C	ENSG00000169641	ENST00000302291	Transcript	NON_SYNONYMOUS_CODING	2981	2179	727	A/T	Gcc/Acc	-	ENSP=ENSP00000303758;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LUZP1	T	T/T,C/C	C	C	C	H/H,A/A	rs144862656	1.0	.	3.81	0.392	0.956	205	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=77;GAnc=C;GRP=3.81;HRun=0;MQ=37.62;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,-,C;UR;bSC=205;mSC=0.392;pSC=0.956	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,138,1778:0,0:0,0:0,0:25,23:0:37.62:0;1/1:29:87.29:1160,87,0:0,0:13,16:0,0:0,0:0:37.00:0	-
1_23419806_A/C	1	23419806	C	ENSG00000169641	ENST00000302291	Transcript	NON_SYNONYMOUS_CODING	1751	949	317	A/S	Gcc/Tcc	-	ENSP=ENSP00000303758;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LUZP1	A	A/A,C/C	C	C	C	H/H,A/A	rs12091554	0.96	.	5.16	1.000	0.632	210	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.02;AN=4;CAnc=C;DP=87;GAnc=C;GRP=5.16;HRun;MQ=39.06;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=210;mSC=1.000;pSC=0.632	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:99:0,172,2188:23,34:0,0:0,0:0,0:0:39.06:0;1/1:30:90.29:1177,90,0:0,0:14,16:0,0:0,0:0:37.00:0	-
1_24932223_G/C	1	24932223	C	ENSG00000184454	ENST00000374392	Transcript	NON_SYNONYMOUS_CODING	360	294	98	H/Q	caC/caG	-	ENSP=ENSP00000363513;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C1orf130	G	C/C,C/G	C	C	C	A/A,A/H	rs62623442	0.95	CpG	0.4	0.171	0.098	646	1	1000gALT=C;AC=3;AF=0.75;AF1000g=0.05;AFR_AF=0.19;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=64;Dels=0.00;FS=0.000;GAnc=C;GRP=0.4;HRun=0;HaplotypeScore=1.9931;MQ=38.19;MQ0=0;Map20=1;OAnc=C;QD=38.12;TS=HPGOMC;TSseq=G,C,C,C,T,C;bSC=646;mSC=0.171;pSC=0.098	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1787,135,0:0,0:22,22:0,0:1,0:0:38.19:0;0/1:18:99:289,0,306:0,0:4,5:6,3:0,0:0:37.00:0	+
1_26142081_G/A	1	26142081	A	ENSG00000162430	ENST00000354177	Transcript	NON_SYNONYMOUS_CODING	1598	1543	515	M/V	Atg/Gtg	-	ENSP=ENSP00000346109;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=SEPN1	G	A/G,G/G	A	A	A	A/H,H/H	rs147131452	0.99	CpG	-0.995	0.934	0.735	437	1	1000gALT=A;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=0.297;CAnc=A;CpG;DP=70;Dels=0.00;FS=1.229;GAnc=A;GRP=-0.995;HRun=0;HaplotypeScore=0.9997;MQ=37.75;MQ0=0;MQRankSum=-1.572;Map20=1;OAnc=A;QD=13.32;ReadPosRankSum=-0.920;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=437;mSC=0.934;pSC=0.735	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:40:99:563,0,756:8,10:0,0:9,13:0,0:0:37.75:0;0/0:30:90.28:0,90,1186:0,0:0,0:11,19:0,0:0:37.00:0	+
1_26691466_C/T	1	26691466	T	ENSG00000176083	ENST00000349618	Transcript	NON_SYNONYMOUS_CODING	652	571	191	T/A	Acc/Gcc	-	ENSP=ENSP00000344095;PolyPhen=benign(0.001);SIFT=tolerated(0.59);HGNC=ZNF683	C	C/C,T/T	T	T	T	H/H,A/A	rs144892700	0.99	CpG	3.57	0.069	0.643	519	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=T;CpG;DP=53;GAnc=T;GRP=3.57;HRun=0;MQ=37.81;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=519;mSC=0.069;pSC=0.643	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,111,1456:0,0:23,14:0,0:0,0:0:37.81:0;1/1:16:45.15:600,45,0:0,0:0,0:0,0:11,5:0:37.00:0	-
1_32279871_T/C	1	32279871	C	ENSG00000134668	ENST00000360482	Transcript	NON_SYNONYMOUS_CODING	1194	1064	355	R/Q	cGg/cAg	-	ENSP=ENSP00000353670;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPOCD1	T	C/C,C/C	C	C	C	A/A,A/A	rs112651926	0.99	CpG	-3.82	0.000	0.169	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=47;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.82;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.70;TS=HPGOMC;TSseq=T,C,C,C,C,C;mSC=0.000;pSC=0.169	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.30:1233,93,0:0,0:14,17:0,0:0,0:0:37.00:0;1/1:16:48.15:628,48,0:0,0:7,9:0,0:0,0:0:37.00:0	-
1_32279890_T/C	1	32279890	C	ENSG00000134668	ENST00000360482	Transcript	NON_SYNONYMOUS_CODING	1175	1045	349	A/T	Gct/Act	-	ENSP=ENSP00000353670;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPOCD1	T	C/C,C/C	C	C	C	A/A,A/A	rs112752591	0.99	.	-3.36	0.001	0.168	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=-0.047;CAnc=C;DP=54;Dels=0.00;FS=3.378;GAnc=C;GRP=-3.36;HRun=2;HaplotypeScore=0.9997;MQ=37.81;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=C;QD=36.82;ReadPosRankSum=1.171;TS=HPGOMC;TSseq=T,C,C,C,C,C;mSC=0.001;pSC=0.168	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:66.64:1395,67,0:0,0:16,20:0,0:1,0:0:37.81:0;1/1:17:51.16:661,51,0:0,0:8,9:0,0:0,0:0:37.00:0	-
1_32682674_T/C	1	32682674	C	ENSG00000160055	ENST00000373593	Transcript	NON_SYNONYMOUS_CODING	535	514	172	G/R	Gga/Aga	-	ENSP=ENSP00000362695;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TMEM234	T	C/C,T/T	C	C	C	A/A,H/H	.	1	.	1.57	0.989	0.362	227	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=64;Dels=0.00;FS=0.000;GAnc=C;GRP=1.57;HRun=2;HaplotypeScore=0.9998;MQ=39.01;MQ0=0;Map20=1;OAnc=C;QD=36.89;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=227;mSC=0.989;pSC=0.362	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1472,111,0:0,1:19,19:0,0:0,0:0:39.01:0;0/0:25:75.24:0,75,988:0,0:0,0:0,0:10,15:0:37.00:0	-
1_32827601_G/C	1	32827601	C	ENSG00000225828	ENST00000432622	Transcript	NON_SYNONYMOUS_CODING	244	92	31	R/P	cGg/cCg	-	ENSP=ENSP00000455971;PolyPhen=benign(0)	G	C/C,C/C	C	C	C	A/A,A/A	rs57541735	0.94	CpG	1.41	1.000	0.066	265	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.23;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=34;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=1.41;HRun=2;HaplotypeScore=1.5781;MQ=38.35;MQ0=0;Map20=1;OAnc=C;QD=38.25;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=265;mSC=1.000;pSC=0.066	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:22:66.22:874,66,0:0,0:9,13:0,0:0,0:0:38.35:0;1/1:12:36.12:480,36,0:0,0:7,5:0,0:0,0:0:37.00:0	-
1_34401453_A/G	1	34401453	G	ENSG00000121904	ENST00000373381	Transcript	NON_SYNONYMOUS_CODING	797	620	207	P/L	cCt/cTt	-	ENSP=ENSP00000362479;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CSMD2	A	G/G,G/G	G	G	G	A/A,A/A	rs16836099	0.91	.	5.27	0.374	0.933	905	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.34;AMR_AF=0.05;AN=4;CAnc=G;DP=65;Dels=0.00;FS=0.000;GAnc=G;GRP=5.27;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.67;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=905;mSC=0.374;pSC=0.933	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1619,123,0:0,0:0,0:17,23:0,0:0:37.00:0;1/1:24:72.23:939,72,0:0,0:0,0:9,15:0,0:0:37.00:0	-
1_35578693_C/T	1	35578693	T	ENSG00000197056	ENST00000359858	Transcript	NON_SYNONYMOUS_CODING	1412	1262	421	I/T	aTa/aCa	-	ENSP=ENSP00000352920;PolyPhen=benign(0);SIFT=tolerated(0.48);HGNC=ZMYM1	C	C/C,T/T	T	T	T	H/H,A/A	rs116729905	0.98	.	-4.04	.	0.766	344	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=T;DP=106;GAnc=T;GRP=-4.04;HRun=0;MQ=40.34;MQ0=0;Map20=1;OAnc=T;TS=HPGOMCC;TSseq=C,T,T,T,T,T,T,T;UR;bSC=344;pSC=0.766	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:69:99:0,208,2712:0,0:51,17:0,0:0,0:0:40.34:0;1/1:37:99:1469,111,0:0,0:0,0:0,0:24,13:0:37.00:0	+
1_38047062_C/G	1	38047062	G	ENSG00000134697	ENST00000538069	Transcript	NON_SYNONYMOUS_CODING	345	346	116	L/V	Ctc/Gtc	-	ENSP=ENSP00000441288;PolyPhen=benign(0);SIFT=tolerated(0.17);HGNC=GNL2	C	G/G,C/C	G	G	G	A/A,H/H	rs112076625	0.97	.	-0.203	0.000	0.131	386	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.03;AMR_AF=0.02;AN=4;CAnc=G;DP=50;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=G;GRP=-0.203;HRun=0;HaplotypeScore=0.0000;MQ=38.03;MQ0=0;Map20=1;OAnc=G;QD=37.73;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=386;mSC=0.000;pSC=0.131	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.27:1127,87,0:0,0:0,0:16,13:0,0:0:38.03:0;0/0:21:63.21:0,63,833:0,0:10,11:0,0:0,0:0:37.00:0	-
1_40726647_C/T	1	40726647	T	ENSG00000084073	ENST00000372759	Transcript	NON_SYNONYMOUS_CODING	425	260	87	I/T	aTt/aCt	-	ENSP=ENSP00000361845;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZMPSTE24	C	C/C,T/T	T	T	T	H/H,A/A	.	1	.	3.57	1.000	0.922	365	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=92;GAnc=T;GRP=3.57;HRun;MQ=41.23;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=365;mSC=1.000;pSC=0.922	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:54:99:0,159,2062:0,0:29,25:0,0:0,0:0:41.23:0;1/1:38:99:1482,114,0:0,0:0,0:0,0:18,20:0:37.00:0	+
1_41976529_C/T	1	41976529	T	ENSG00000127124	ENST00000247584	Transcript	NON_SYNONYMOUS_CODING	7620	6814	2272	R/G	Agg/Ggg	-	ENSP=ENSP00000247584;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=HIVEP3	C	C/C,T/T	T	T	T	H/H,A/A	rs11809423	0.93	CpG	2.59	0.988	0.963	769	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.22;AMR_AF=0.04;AN=4;ASN_AF=0.01;CAnc=T;CpG;DP=55;EUR_AF=0.03;GAnc=T;GRP=2.59;HRun=0;MQ=37.75;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=769;mSC=0.988;pSC=0.963	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:99:0,117,1549:0,0:23,16:0,1:0,0:0:37.75:0;1/1:15:45.15:594,45,0:0,0:0,0:0,0:8,7:0:37.00:0	-
1_43042767_A/G	1	43042767	G	ENSG00000186409	ENST00000340612	Transcript	NON_SYNONYMOUS_CODING	1022	932	311	C/Y	tGc/tAc	-	ENSP=ENSP00000340378;PolyPhen=benign(0.001);SIFT=tolerated(0.23);HGNC=CCDC30	A	G/G,G/G	G	G	G	A/A,A/A	rs61729282	0.99	.	5.99	1.000	0.214	469	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;CAnc=G;DP=80;Dels=0.00;FS=0.000;GAnc=G;GRP=5.99;HRun=0;HaplotypeScore=2.7320;MQ=38.67;MQ0=0;Map20=1;OAnc=G;QD=38.11;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=469;mSC=1.000;pSC=0.214	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2053,157,0:0,0:0,0:25,27:1,0:0:38.67:0;1/1:27:81.26:1047,81,0:0,0:0,0:11,16:0,0:0:37.00:0	+
1_43812255_A/G	1	43812255	G	ENSG00000117400	ENST00000372468	Transcript	NON_SYNONYMOUS_CODING	1165	1120	374	A/T	Gct/Act	-	ENSP=ENSP00000361546;PolyPhen=benign(0.001);SIFT=tolerated(0.84);HGNC=MPL	A	G/G,G/G	G	G	G	A/A,A/A	rs190983971	0.99	.	.	.	.	.	.	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=-0.515;CAnc=G;DP=61;Dels=0.00;FS=0.000;GAnc=G;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-1.452;OAnc=G;QD=35.42;ReadPosRankSum=0.609;TS=HPGOMC;TSseq=A,-,G,G,G,G;UR	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:71.35:1379,71,0:0,1:0,0:11,25:1,0:0:37.00:0;1/1:23:69.21:882,69,0:0,0:0,0:14,9:0,0:0:37.00:0	+
1_46877885_C/G	1	46877885	G	ENSG00000117480	ENST00000243167	Transcript	NON_SYNONYMOUS_CODING	1511	1427	476	G/A	gGc/gCc	-	ENSP=ENSP00000243167;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAAH	C	G/G,G/G	G	G	G	A/A,A/A	rs75429705	0.99	.	4.66	1.000	0.378	299	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=G;DP=55;Dels=0.00;FS=0.000;GAnc=G;GRP=4.66;HRun=2;HaplotypeScore=0.7340;MQ=37.73;MQ0=0;Map20=1;OAnc=G;QD=38.23;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=299;mSC=1.000;pSC=0.378	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1600,123,0:0,0:0,0:20,21:0,0:0:37.73:0;1/1:14:42.13:548,42,0:0,0:0,0:6,8:0,0:0:37.00:0	+
1_47048935_C/G	1	47048935	G	ENSG00000079277	ENST00000341183	Transcript	NON_SYNONYMOUS_CODING	345	101	34	A/G	gCc/gGc	-	ENSP=ENSP00000339573;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=MKNK1	C	C/C,G/G	G	G	G	H/H,A/A	.	1	.	3.99	0.942	0.818	424	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=64;GAnc=G;GRP=3.99;HRun=2;MQ=38.60;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=424;mSC=0.942;pSC=0.818	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,111,1422:0,0:15,22:0,0:0,0:0:38.60:0;1/1:27:81.26:1057,81,0:0,0:0,0:12,15:0,0:0:37.00:0	-
1_47905252_G/C	1	47905252	C	ENSG00000186564	ENST00000334793	Transcript	NON_SYNONYMOUS_CODING	3564	1445	482	P/R	cCg/cGg	-	ENSP=ENSP00000335493;PolyPhen=unknown(0);SIFT=tolerated(0.55);HGNC=FOXD2	G	C/C,G/G	C	C	C	A/A,H/H	.	1	CpG	1.77	0.992	0.921	634	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=C;GRP=1.77;HRun=3;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.84;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=634;mSC=0.992;pSC=0.921	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.29:1206,93,0:0,0:14,16:0,0:0,0:0:37.00:0;0/0:19:57.17:0,57,732:0,0:0,0:13,6:0,0:0:37.00:0	+
1_48697226_T/C	1	48697226	C	ENSG00000117834	ENST00000236495	Transcript	NON_SYNONYMOUS_CODING	745	695	232	T/M	aCg/aTg	-	ENSP=ENSP00000236495;PolyPhen=benign(0.001);SIFT=tolerated(0.24);HGNC=SLC5A9	T	C/C,C/C	C	C	C	A/A,A/A	rs12047252	0.93	CpG	2.92	.	0.629	634	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AMR_AF=0.02;AN=4;ASN_AF=0.24;CAnc=C;CpG;DP=43;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=2.92;HRun=0;HaplotypeScore=1.9930;MQ=39.09;MQ0=0;Map20=1;OAnc=C;QD=37.06;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=634;pSC=0.629	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:81.26:1071,81,0:0,0:13,15:0,0:0,0:0:39.09:0;1/1:15:45.15:596,45,0:0,0:7,8:0,0:0,0:0:37.00:0	+
1_55248120_T/C	1	55248120	C	ENSG00000006555	ENST00000371276	Transcript	NON_SYNONYMOUS_CODING	1155	1051	351	E/K	Gag/Aag	-	ENSP=ENSP00000360323;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TTC22	T	C/C,C/C	C	C	C	A/A,A/A	rs61733130	0.98	CpG	2.18	0.969	0.583	866	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.08;BaseQRankSum=-0.520;CAnc=C;CpG;DP=63;Dels=0.00;FS=4.260;GAnc=C;GRP=2.18;HRun=0;HaplotypeScore=0.9997;MQ=37.62;MQ0=0;MQRankSum=0.866;Map20=1;OAnc=C;QD=36.16;ReadPosRankSum=-0.173;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=866;mSC=0.969;pSC=0.583	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:80.39:1515,80,0:0,0:25,14:0,0:1,1:0:37.62:0;1/1:22:66.21:869,66,0:0,0:8,14:0,0:0,0:0:37.00:0	-
1_64059197_A/C	1	64059197	C	ENSG00000079739	ENST00000371084	Transcript	NON_SYNONYMOUS_CODING	251	38	13	P/Q	cCg/cAg	-	ENSP=ENSP00000360125;PolyPhen=benign(0);SIFT=tolerated(0.25);HGNC=PGM1	A	C/C,C/C	C	C	C	A/A,A/A	.	1	CpG	3.44	0.876	0.943	602	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.502;CAnc=C;CpG;DP=48;Dels=0.00;FS=0.000;GAnc=C;GRP=3.44;HRun=2;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-0.578;Map20=1;OAnc=C;QD=34.30;ReadPosRankSum=0.924;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=602;mSC=0.876;pSC=0.943	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:50.28:1096,50,0:1,0:19,10:0,0:1,0:0:37.00:0;1/1:17:51.15:646,51,0:0,0:8,9:0,0:0,0:0:37.00:0	+
1_70890023_G/C	1	70890023	C	ENSG00000116761	ENST00000370938	Transcript	NON_SYNONYMOUS_CODING	656	512	171	A/G	gCc/gGc	-	ENSP=ENSP00000359976;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CTH	G	C/C,G/G	C	C	C	A/A,H/H	.	1.0	.	4.8	1.000	0.506	630	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;DP=62;Dels=0.00;FS=0.000;GAnc=C;GRP=4.8;HRun;HaplotypeScore=0.0000;MQ=39.37;MQ0=0;Map20=1;OAnc=C;QD=37.96;TS=HPGOC;TSseq=G,C,C,C,C;UR;bSC=630;mSC=1.000;pSC=0.506	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1438,111,0:0,0:18,19:0,0:0,0:0:39.37:0;0/0:25:75.24:0,75,991:0,0:0,0:12,13:0,0:0:37.00:0	+
1_74649353_C/T	1	74649353	T	ENSG00000162620	ENST00000354431	Transcript	NON_SYNONYMOUS_CODING	208	16	6	I/V	Atc/Gtc	-	ENSP=ENSP00000346414;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LRRIQ3	C	T/T,C/C	T	T	T	A/A,H/H	.	1	.	-2.52	0.600	0.950	700	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=80;Dels=0.00;FS=0.000;GAnc=T;GRP=-2.52;HRun;HaplotypeScore=0.9997;MQ=38.57;MQ0=0;Map20=1;OAnc=T;QD=37.45;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=700;mSC=0.600;pSC=0.950	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1906,147,0:0,0:0,0:0,0:24,25:0:38.57:0;0/0:30:90.29:0,90,1179:0,0:12,18:0,0:0,0:0:37.00:0	-
1_79106805_G/A	1	79106805	A	ENSG00000137959	ENST00000342282	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	797	374	125	Q/R	cAg/cGg	-	ENSP=ENSP00000342833;PolyPhen=benign(0);SIFT=tolerated(0.58);HGNC=IFI44L	G	A/A,A/A	A	A	A	A/A,A/A	.	1	CpG	3.01	0.679	0.795	883	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.387;CAnc=A;CpG;DP=94;Dels=0.00;FS=0.000;GAnc=A;GRP=3.01;HRun=0;HaplotypeScore=0.0000;MQ=38.19;MQ0=0;MQRankSum=-0.490;Map20=1;OAnc=A;QD=34.37;ReadPosRankSum=0.851;TS=HPGOM;TSseq=G,A,A,A,N;bSC=883;mSC=0.679;pSC=0.795	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:64.46:1751,64,0:31,17:0,0:1,1:0,0:0:38.19:0;1/1:44:99:1694,129,0:21,23:0,0:0,0:0,0:0:37.00:0	+
1_93160902_T/C	1	93160902	C	ENSG00000067208	ENST00000370331	Transcript	NON_SYNONYMOUS_CODING	1016	1006	336	I/V	Att/Gtt	-	ENSP=ENSP00000359356;PolyPhen=benign(0.005);SIFT=tolerated(0.95);HGNC=EVI5	C	T/T,T/T	T	T	T	A/A,A/A	rs2391199	0.94	.	2.3	0.997	0.757	396	1	1000gALT=C;AC=0;AF=0.00;AF1000g=0.94;AFR_AF=0.95;AMR_AF=0.93;AN=4;ASN_AF=0.97;CAnc=T;DP=101;EUR_AF=0.91;GAnc=T;GRP=2.3;MQ=38.87;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=396;mSC=0.997;pSC=0.757	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:63:99:0,187,2460:0,0:0,0:0,0:31,31:0:38.87:0;0/0:38:74.37:0,74,1430:0,0:1,0:0,0:15,22:0:37.00:0	-
1_94564451_T/G	1	94564451	G	ENSG00000198691	ENST00000370225	Transcript	NON_SYNONYMOUS_CODING	754	667	223	Q/K	Cag/Aag	-	ENSP=ENSP00000359245;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ABCA4	T	T/T,G/G	G	G	G	H/H,A/A	rs147619585	1.0	.	3.93	0.001	0.388	835	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;DP=60;GAnc=G;GRP=3.93;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=835;mSC=0.001;pSC=0.388	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:99:0,117,1544:0,0:0,0:0,0:22,18:0:37.00:0;1/1:20:60.19:779,60,0:0,0:0,0:15,5:0,0:0:37.00:0	-
1_101196790_G/A	1	101196790	A	ENSG00000162692	ENST00000294728	Transcript	NON_SYNONYMOUS_CODING	1342	1241	414	D/G	gAc/gGc	-	ENSP=ENSP00000294728;PolyPhen=benign(0.001);SIFT=tolerated(0.24);HGNC=VCAM1	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	-11	.	0.021	778	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=84;Dels=0.00;FS=0.000;GAnc=A;GRP=-11;HRun=0;HaplotypeScore=0.0000;MQ=39.96;MQ0=0;Map20=1;OAnc=A;QD=37.47;TS=HPGOMC;TSseq=G,A,A,A,T,T;UR;bSC=778;pSC=0.021	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1869,144,0:23,26:0,0:0,0:0,0:0:39.96:0;1/1:35:99:1378,105,0:16,19:0,0:0,0:0,0:0:37.00:0	+
1_103491461_T/G	1	103491461	G	ENSG00000060718	ENST00000358392	Transcript	NON_SYNONYMOUS_CODING	1146	828	276	N/K	aaC/aaA	-	ENSP=ENSP00000351163;PolyPhen=unknown(0);SIFT=tolerated(0.42);HGNC=COL11A1	T	G/G,G/G	G	G	G	A/A,A/A	rs12731843	0.92	.	0.879	0.998	0.816	598	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.10;AMR_AF=0.05;AN=4;ASN_AF=0.07;CAnc=G;DP=88;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=G;GRP=0.879;HRun=0;HaplotypeScore=0.0000;MQ=40.57;MQ0=0;Map20=1;OAnc=G;QD=37.87;TS=HPGOMC;TSseq=T,G,G,G,N,G;bSC=598;mSC=0.998;pSC=0.816	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2268,175,0:0,1:0,0:25,33:0,0:0:40.57:0;1/1:29:84.27:1097,84,0:1,0:0,0:11,17:0,0:0:37.00:0	-
1_110766466_G/A	1	110766466	A	ENSG00000116396	ENST00000369787	Transcript	NON_SYNONYMOUS_CODING	1586	1559	520	Y/C	tAc/tGc	-	ENSP=ENSP00000358802;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KCNC4	G	A/A,A/A	A	A	A	A/A,A/A	rs12411176	0.92	.	2.11	0.563	0.972	883	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.16;AMR_AF=0.04;AN=4;ASN_AF=0.10;CAnc=A;DP=48;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=2.11;HRun=0;HaplotypeScore=0.0000;MQ=38.41;MQ0=0;Map20=1;OAnc=A;QD=37.86;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=883;mSC=0.563;pSC=0.972	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1358,105,0:12,23:0,0:0,0:0,0:0:38.41:0;1/1:13:39.13:520,39,0:5,8:0,0:0,0:0,0:0:37.00:0	+
1_118558632_T/C	1	118558632	C	ENSG00000155761	ENST00000336338	Transcript	NON_SYNONYMOUS_CODING	4309	4243	1415	A/T	Gcc/Acc	-	ENSP=ENSP00000337804;PolyPhen=benign(0.001);SIFT=tolerated(0.98);HGNC=SPAG17	T	C/C,C/C	C	C	C	A/A,A/A	.	1	.	-3.53	0.007	0.573	446	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=77;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.53;HRun;HaplotypeScore=0.0000;MQ=38.92;MQ0=0;Map20=1;OAnc=C;QD=37.63;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=446;mSC=0.007;pSC=0.573	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1764,138,0:0,0:19,27:0,0:0,0:0:38.92:0;1/1:31:93.29:1213,93,0:0,0:18,13:0,0:0,0:0:37.00:0	-
1_118634297_A/C	1	118634297	C	ENSG00000155761	ENST00000336338	Transcript	NON_SYNONYMOUS_CODING	1357	1291	431	D/Y	Gat/Tat	-	ENSP=ENSP00000337804;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPAG17	A	C/C,C/C	C	C	C	A/A,A/A	.	1	.	5.59	1.000	0.441	413	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=96;Dels=0.00;FS=0.000;GAnc=C;GRP=5.59;HRun=0;HaplotypeScore=0.9665;MQ=39.43;MQ0=0;Map20=1;OAnc=C;QD=37.62;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=413;mSC=1.000;pSC=0.441	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2290,178,0:0,0:30,29:0,0:1,0:0:39.43:0;1/1:36:99:1412,108,0:0,0:16,20:0,0:0,0:0:37.00:0	-
1_149871905_G/C	1	149871905	C	ENSG00000178096	ENST00000369150	Transcript	NON_SYNONYMOUS_CODING	615	293	98	A/G	gCa/gGa	-	ENSP=ENSP00000358146;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=BOLA1	G	C/C,G/G	C	C	C	A/A,H/H	rs1044808	0.96	.	5.48	0.991	0.165	305	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AMR_AF=0.03;AN=4;CAnc=C;DP=51;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=C;GRP=5.48;HRun=0;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;Map20=1;OAnc=C;QD=38.20;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=305;mSC=0.991;pSC=0.165	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.31:1256,96,0:0,0:18,13:0,0:0,0:0:38.84:0;0/0:19:57.17:0,57,725:0,0:0,0:8,11:0,0:0:37.00:0	+
1_151149487_A/G	1	151149487	G	ENSG00000163159	ENST00000354473	Transcript	NON_SYNONYMOUS_CODING	798	761	254	A/V	gCg/gTg	-	ENSP=ENSP00000346464;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=VPS72	A	G/G,A/A	G	G	G	A/A,H/H	.	1.0	CpG	4.42	.	.	127	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=62;Dels=0.00;FS=0.000;GAnc=G;GRP=4.42;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.81;TS=HPGOMC;TSseq=A,G,-,G,G,G;UR;bSC=127	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1508,114,0:0,0:0,0:20,17:0,0:0:37.00:0;0/0:24:72.23:0,72,941:12,12:0,0:0,0:0,0:0:37.00:0	-
1_152082068_T/C	1	152082068	C	ENSG00000159450	ENST00000368804	Transcript	NON_SYNONYMOUS_CODING	3625	3625	1209	E/K	Gaa/Aaa	-	ENSP=ENSP00000357794;PolyPhen=unknown(0);HGNC=TCHH	T	C/C,C/C	C	C	C	A/A,A/A	rs72477384	0.99	.	2.54	0.028	0.011	477	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=C;DP=67;Dels=0.00;FS=0.000;GAnc=C;GRP=2.54;HRun;HaplotypeScore=0.0000;MQ=39.14;MQ0=0;Map20=1;OAnc=C;QD=38.02;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=477;mSC=0.028;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1592,120,0:0,0:23,17:0,0:0,0:0:39.14:0;1/1:26:78.25:1019,78,0:0,0:9,17:0,0:0,0:0:37.00:0	-
1_152128838_T/A	1	152128838	A	ENSG00000215853	ENST00000316073	Transcript	NON_SYNONYMOUS_CODING	802	737	246	L/H	cTt/cAt	-	ENSP=ENSP00000317895;PolyPhen=benign(0);SIFT=tolerated(0.69);HGNC=RPTN	T	A/A,A/A	A	A	A	A/A,A/A	rs75497821	0.99	.	-0.224	0.000	0.134	478	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=A;DP=97;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.224;HRun;HaplotypeScore=0.0000;MQ=37.52;MQ0=0;Map20=1;OAnc=A;QD=37.65;TS=HPGOMC;TSseq=T,A,A,-,A,A;bSC=478;mSC=0.000;pSC=0.134	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2217,169,0:22,36:0,0:0,0:0,0:0:37.52:0;1/1:39:99:1517,117,0:22,17:0,0:0,0:0,0:0:37.00:0	-
1_152129244_A/G	1	152129244	G	ENSG00000215853	ENST00000316073	Transcript	NON_SYNONYMOUS_CODING	396	331	111	R/C	Cgt/Tgt	-	ENSP=ENSP00000317895;PolyPhen=benign(0);SIFT=tolerated(0.31);HGNC=RPTN	A	G/G,A/A	G	G	G	A/A,H/H	rs181339224	1.0	CpG	3.87	0.000	0.103	478	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;BaseQRankSum=0.257;CAnc=G;CpG;DP=82;Dels=0.00;FS=0.000;GAnc=G;GRP=3.87;HRun;HaplotypeScore=0.0000;MQ=38.10;MQ0=0;MQRankSum=1.027;Map20=1;OAnc=G;QD=37.62;ReadPosRankSum=-1.091;TS=HPGOMC;TSseq=A,G,G,N,G,G;bSC=478;mSC=0.000;pSC=0.103	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2064,123,0:0,1:0,0:25,28:0,0:0:38.10:0;0/0:28:84.27:0,84,1106:11,17:0,0:0,0:0,0:0:37.00:0	-
1_152671688_A/G	1	152671688	G	ENSG00000187173	ENST00000368779	Transcript	NON_SYNONYMOUS_CODING	362	311	104	G/D	gGc/gAc	-	ENSP=ENSP00000357768;PolyPhen=unknown(0);HGNC=LCE2A	A	G/A,A/A	G	G	G	A/H,H/H	.	1	.	1.44	.	0.570	783	1	AC=1;AF=0.25;AN=4;BaseQRankSum=0.104;CAnc=G;DP=44;Dels=0.00;FS=1.367;GAnc=G;GRP=1.44;HRun=4;HaplotypeScore=0.9997;MQ=37.77;MQ0=0;MQRankSum=0.145;Map20=1;OAnc=G;QD=13.43;ReadPosRankSum=2.681;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=783;pSC=0.570	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:31:99:446,0,510:8,9:0,0:8,6:0,0:0:37.77:0;0/0:13:39.11:0,39,496:8,5:0,0:0,0:0,0:0:35.98:0	+
1_152944389_G/A	1	152944389	A	ENSG00000184148	ENST00000328051	Transcript	NON_SYNONYMOUS_CODING	72	23	8	Q/R	cAg/cGg	-	ENSP=ENSP00000332163;PolyPhen=unknown(0);HGNC=SPRR4	G	A/A,G/G	A	A	A	A/A,H/H	rs73010454	0.95	CpG,RM	4.36	0.008	0.285	789	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.18;AMR_AF=0.01;AN=4;ASN_AF=0.03;CAnc=A;CpG;DP=58;Dels=0.02;FS=0.000;GAnc=A;GRP=4.36;HRun=0;HaplotypeScore=2.8995;MQ=38.55;MQ0=0;Map20=1;OAnc=A;QD=36.79;RM;TS=HPGOMC;TSseq=G,A,-,A,A,-;UR;bSC=789;mSC=0.008;pSC=0.285	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1431,108,0:22,15:0,0:0,0:0,0:0:38.55:0;0/0:20:60.19:0,60,783:0,0:0,0:7,13:0,0:0:37.00:0	+
1_153513900_T/C	1	153513900	C	ENSG00000196420	ENST00000359215	Transcript	NON_SYNONYMOUS_CODING	229	1	1	V/M	Gtg/Atg	-	ENSP=ENSP00000352148;PolyPhen=benign(0);SIFT=tolerated(0.35);HGNC=S100A5	T	C/C,T/T	C	C	C	A/A,H/H	rs7529714	0.98	.	3.26	0.221	0.045	818	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;BaseQRankSum=-0.743;CAnc=C;DP=57;Dels=0.00;FS=0.000;GAnc=C;GRP=3.26;HRun=0;HaplotypeScore=3.9989;MQ=36.71;MQ0=0;MQRankSum=0.050;Map20=1;OAnc=C;QD=36.12;ReadPosRankSum=1.634;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=818;mSC=0.221;pSC=0.045	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:65.33:1297,65,0:0,0:16,18:0,0:0,1:0:36.71:0;0/0:22:66.21:0,66,863:0,0:0,0:0,0:11,11:0:37.00:0	-
1_153751869_G/T	1	153751869	T	ENSG00000143554	ENST00000271857	Transcript	NON_SYNONYMOUS_CODING	2939	2179	727	S/A	Tct/Gct	-	ENSP=ENSP00000271857;PolyPhen=benign(0.005);SIFT=tolerated(1);HGNC=SLC27A3	G	T/T,T/T	T	T	T	A/A,A/A	.	1.0	CpG	-9	0.000	0.483	190	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=T;CpG;DP=48;Dels=0.00;FS=0.000;GAnc=T;GRP=-9;HRun=0;HaplotypeScore=0.0000;MQ=36.70;MQ0=0;Map20=1;OAnc=T;QD=38.17;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=190;mSC=0.000;pSC=0.483	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1331,102,0:0,0:0,0:0,0:10,23:0:36.70:0;1/1:14:39.13:520,39,0:0,0:0,0:0,0:4,10:0:37.00:0	+
1_155007181_T/G	1	155007181	G	ENSG00000163357	ENST00000295542	Transcript	NON_SYNONYMOUS_CODING	336	240	80	M/I	atG/atT	-	ENSP=ENSP00000295542;PolyPhen=benign(0);SIFT=tolerated(0.37);HGNC=DCST1	T	G/G,G/G	G	G	G	A/A,A/A	rs61730947	0.98	.	4.62	0.738	0.868	341	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=G;DP=91;Dels=0.00;FS=0.000;GAnc=G;GRP=4.62;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.50;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=341;mSC=0.738;pSC=0.868	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2304,175,0:0,0:0,0:34,25:0,0:0:37.00:0;1/1:32:96.31:1269,96,0:0,0:0,0:21,11:0,0:0:37.00:0	+
1_155294914_T/C	1	155294914	C	ENSG00000160753	ENST00000292254	Transcript	NON_SYNONYMOUS_CODING	389	71	24	A/V	gCc/gTc	-	ENSP=ENSP00000292254;PolyPhen=benign(0);SIFT=tolerated(0.6);HGNC=RUSC1	T	C/C,C/C	C	C	C	A/A,A/A	rs35826120	0.98	.	4.67	0.564	0.251	40	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;BaseQRankSum=-0.201;CAnc=C;DP=62;Dels=0.00;FS=0.000;GAnc=C;GRP=4.67;HRun;HaplotypeScore=2.9992;MQ=37.00;MQ0=0;MQRankSum=-0.363;Map20=1;OAnc=C;QD=36.83;ReadPosRankSum=1.652;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=40;mSC=0.564;pSC=0.251	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.41:1617,89,0:0,0:18,24:0,0:0,1:0:37.00:0;1/1:19:57.17:732,57,0:0,0:9,10:0,0:0,0:0:37.00:0	+
1_156352013_T/C	1	156352013	C	ENSG00000132677	ENST00000537040	Transcript	NON_SYNONYMOUS_CODING	669	631	211	H/Y	Cac/Tac	-	ENSP=ENSP00000441197;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=RHBG	T	C/C,C/C	C	C	C	A/A,A/A	rs752641	0.91	.	0.147	0.000	0.011	628	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.31;AMR_AF=0.03;AN=4;ASN_AF=0.03;CAnc=C;DP=87;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=0.147;HRun=0;HaplotypeScore=2.9992;MQ=38.12;MQ0=0;Map20=1;OAnc=C;QD=37.83;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=628;mSC=0.000;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1887,147,0:0,0:22,27:0,0:0,0:0:38.12:0;1/1:38:99:1492,114,0:0,0:17,21:0,0:0,0:0:36.73:0	+
1_157067699_T/C	1	157067699	C	ENSG00000253831	ENST00000454449	Transcript	NON_SYNONYMOUS_CODING	853	568	190	A/T	Gcc/Acc	-	ENSP=ENSP00000430271;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ETV3L	T	C/C,T/T	C	C	C	A/A,H/H	rs61736984	0.97	.	2.6	.	0.270	725	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.02;AN=4;BaseQRankSum=-0.158;CAnc=C;DP=53;Dels=0.00;EUR_AF=0.01;FS=4.771;GAnc=C;GRP=2.6;HRun;HaplotypeScore=2.9971;MQ=37.71;MQ0=0;MQRankSum=0.578;Map20=1;OAnc=C;QD=35.46;ReadPosRankSum=-1.208;TS=HPGOMC;TSseq=T,C,C,C,N,C;bSC=725;pSC=0.270	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:59.30:1203,59,0:0,0:10,22:0,0:1,0:0:37.71:0;0/0:20:60.20:0,60,800:0,0:0,0:0,0:8,12:0:37.00:0	-
1_158261071_A/C	1	158261071	C	ENSG00000158481	ENST00000368169	Transcript	NON_SYNONYMOUS_CODING	501	209	70	T/N	aCc/aAc	-	ENSP=ENSP00000357151;PolyPhen=benign(0);SIFT=tolerated(0.22);HGNC=CD1C	A	C/C,C/C	C	C	C	A/A,A/A	rs3138100	0.97	.	1.58	0.000	.	878	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.01;AN=4;CAnc=C;DP=80;Dels=0.00;FS=0.000;GAnc=C;GRP=1.58;HRun;HaplotypeScore=0.9992;MQ=37.97;MQ0=0;Map20=1;OAnc=C;QD=37.35;TS=HPGOM;TSseq=A,C,C,C,C;UR;bSC=878;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1938,153,0:0,0:22,29:0,0:0,0:0:37.97:0;1/1:29:84.27:1101,84,0:1,0:12,16:0,0:0,0:0:37.00:0	+
1_158612618_C/G	1	158612618	G	ENSG00000163554	ENST00000368147	Transcript	NON_SYNONYMOUS_CODING	4729	4591	1531	P/A	Ccc/Gcc	-	ENSP=ENSP00000357129;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPTA1	C	C/C,G/G	G	G	G	H/H,A/A	rs143779235	1.0	CpG	4.27	0.969	0.952	543	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=67;GAnc=G;GRP=4.27;HRun=2;MQ=39.71;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=543;mSC=0.969;pSC=0.952	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,126,1618:0,0:20,22:0,0:1,0:0:39.71:0;1/1:24:72.23:940,72,0:0,0:0,0:12,12:0,0:0:37.00:0	-
1_158648210_T/C	1	158648210	C	ENSG00000163554	ENST00000368147	Transcript	NON_SYNONYMOUS_CODING	931	793	265	D/N	Gac/Aac	-	ENSP=ENSP00000357129;PolyPhen=benign(0.001);SIFT=tolerated(0.41);HGNC=SPTA1	T	C/C,C/C	C	C	C	A/A,A/A	rs183647059	1.0	.	4.66	0.953	0.314	603	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;DP=69;Dels=0.00;FS=0.000;GAnc=C;GRP=4.66;HRun=0;HaplotypeScore=0.6651;MQ=38.38;MQ0=0;Map20=1;OAnc=C;QD=38.65;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=603;mSC=0.953;pSC=0.314	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1695,129,0:0,0:22,21:0,0:0,0:0:38.38:0;1/1:26:78.24:1014,78,0:0,0:12,14:0,0:0,0:0:37.00:0	-
1_158725387_A/G	1	158725387	G	ENSG00000180433	ENST00000368144	Transcript	NON_SYNONYMOUS_CODING	878	782	261	R/H	cGt/cAt	-	ENSP=ENSP00000357126;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR6K6	A	A/A,G/G	G	G	-	H/H,A/A	rs16841042	0.97	CpG	5.39	0.492	0.610	735	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.13;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=70;GAnc=G;GRP=5.39;HRun=0;MQ=37.68;MQ0=0;Map20=1;TS=HPGM;TSseq=A,G,G,G;bSC=735;mSC=0.492;pSC=0.610	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:44:99:0,129,1716:22,22:0,0:0,0:0,0:0:37.68:0;1/1:26:78.26:1035,78,0:0,0:0,0:12,14:0,0:0:37.00:0	+
1_158725564_A/G	1	158725564	G	ENSG00000180433	ENST00000368144	Transcript	NON_SYNONYMOUS_CODING	1055	959	320	R/K	aGa/aAa	-	ENSP=ENSP00000357126;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR6K6	A	A/A,G/G	G	G	-	H/H,A/A	rs16841045	0.94	.	5.26	1.000	0.863	744	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.26;AMR_AF=0.03;AN=4;CAnc=G;DP=92;GAnc=G;GRP=5.26;HRun=0;MQ=38.33;MQ0=0;Map20=1;TS=HPGM;TSseq=A,G,G,G;bSC=744;mSC=1.000;pSC=0.863	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:67:99:0,199,2597:31,36:0,0:0,0:0,0:0:38.33:0;1/1:25:75.24:972,75,0:0,0:0,0:8,17:0,0:0:37.00:0	+
1_159779985_G/T	1	159779985	T	ENSG00000181036	ENST00000321935	Transcript	NON_SYNONYMOUS_CODING	1095	1009	337	L/V	Ttg/Gtg	-	ENSP=ENSP00000320625;PolyPhen=benign(0);SIFT=tolerated(0.92);HGNC=FCRL6	G	G/G,T/T	T	-	T	H/H,A/A	rs73030822	0.96	.	3.34	0.061	0.102	929	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.17;AMR_AF=0.01;AN=4;CAnc=T;DP=68;GRP=3.34;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPOMC;TSseq=G,T,T,T,T;UR;bSC=929;mSC=0.061;pSC=0.102	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:99:0,108,1440:0,0:0,0:26,10:0,0:0:37.00:0;1/1:32:57:1197,57,0:0,0:0,0:0,1:17,14:0:37.00:0	+
1_160302298_T/C	1	160302298	C	ENSG00000122218	ENST00000241704	Transcript	NON_SYNONYMOUS_CODING	666	436	146	A/T	Gca/Aca	-	ENSP=ENSP00000241704;PolyPhen=benign(0.014);SIFT=deleterious(0.02);HGNC=COPA	T	C/C,C/C	C	C	A	A/A,A/A	rs57425682	0.96	CpG	3.92	1.000	0.461	340	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.13;AMR_AF=0.02;AN=4;ASN_AF=0.03;CAnc=C;CpG;DP=76;Dels=0.00;FS=0.000;GAnc=C;GRP=3.92;HRun=0;HaplotypeScore=0.9832;MQ=40.14;MQ0=0;Map20=1;OAnc=A;QD=37.07;TS=HPGOMC;TSseq=T,C,C,A,A,A;UR;bSC=340;mSC=1.000;pSC=0.461	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1738,135,0:0,0:19,24:0,0:1,0:0:40.14:0;1/1:30:50.29:1114,50,0:0,0:16,13:0,0:1,0:0:37.00:0	-
1_160719843_A/C	1	160719843	C	ENSG00000026751	ENST00000359331	Transcript	NON_SYNONYMOUS_CODING	620	609	203	S/R	agC/agA	-	ENSP=ENSP00000352281;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLAMF7	A	C/C,A/A	C	C	C	A/A,H/H	rs117009784	0.98	.	1.17	.	0.413	783	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.05;CAnc=C;DP=80;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=1.17;HRun=0;HaplotypeScore=0.0000;MQ=38.26;MQ0=0;Map20=1;OAnc=C;QD=38.31;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=783;pSC=0.413	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1718,132,0:0,0:22,21:0,0:0,0:0:38.26:0;0/0:36:99:0,108,1419:16,20:0,0:0,0:0,0:0:37.00:0	+
1_160788067_G/A	1	160788067	A	ENSG00000122224	ENST00000263285	Transcript	NON_SYNONYMOUS_CODING	1432	1402	468	I/V	Att/Gtt	-	ENSP=ENSP00000263285;PolyPhen=benign(0.004);SIFT=tolerated(0.74);HGNC=LY9	G	G/G,A/A	A	A	A	H/H,A/A	rs74124285	0.96	CpG	-5.88	0.000	0.686	788	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.02;AN=4;CAnc=A;CpG;DP=93;GAnc=A;GRP=-5.88;HRun=0;MQ=37.99;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,-,C;UR;bSC=788;mSC=0.000;pSC=0.686	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:60:99:0,178,2298:0,1:0,0:25,33:0,0:0:37.99:0;1/1:33:96.31:1262,96,0:17,16:0,0:0,0:0,0:0:37.00:0	+
1_160850446_A/G	1	160850446	G	ENSG00000179914	ENST00000326245	Transcript	NON_SYNONYMOUS_CODING	733	617	206	A/V	gCg/gTg	-	ENSP=ENSP00000323587;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ITLN1	A	G/A,G/G	G	G	G	A/H,A/A	.	1	CpG	2.19	0.001	.	784	1	AC=3;AF=0.75;AN=4;BaseQRankSum=0.996;CAnc=G;CpG;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=2.19;HRun=0;HaplotypeScore=1.9995;MQ=38.88;MQ0=0;MQRankSum=-1.784;Map20=1;OAnc=G;QD=20.60;ReadPosRankSum=-0.186;TS=HPGOMC;TSseq=A,G,G,G,-,G;UR;bSC=784;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:47:99:998,0,563:7,11:0,0:12,17:0,0:0:38.88:0;1/1:28:84.27:1095,84,0:0,0:0,0:9,19:0,0:0:37.00:0	-
1_161970046_A/G	1	161970046	G	ENSG00000162745	ENST00000294794	Transcript	NON_SYNONYMOUS_CODING	1230	806	269	P/L	cCg/cTg	-	ENSP=ENSP00000294794;PolyPhen=benign(0);SIFT=tolerated(0.96);HGNC=OLFML2B	A	G/G,A/A	G	G	G	A/A,H/H	rs36108216	0.99	CpG	5.22	0.222	0.148	884	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AN=4;ASN_AF=0.03;BaseQRankSum=0.400;CAnc=G;CpG;DP=61;Dels=0.00;FS=0.000;GAnc=G;GRP=5.22;HRun;HaplotypeScore=1.9995;MQ=37.68;MQ0=0;MQRankSum=-1.022;Map20=1;OAnc=G;QD=35.72;ReadPosRankSum=-0.222;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=884;mSC=0.222;pSC=0.148	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:77.37:1462,77,0:0,2:0,0:19,19:0,0:0:37.68:0;0/0:21:60.19:0,60,766:12,9:0,0:0,0:0,0:0:36.52:0	-
1_165649851_C/G	1	165649851	G	ENSG00000143149	ENST00000354775	Transcript	NON_SYNONYMOUS_CODING	967	662	221	T/S	aCt/aGt	-	ENSP=ENSP00000346827;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ALDH9A1	C	G/G,C/C	G	G	G	A/A,H/H	rs1065756	0.98	.	5.63	0.029	0.902	895	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.04;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=-1.281;CAnc=G;DP=81;Dels=0.00;FS=0.000;GAnc=G;GRP=5.63;HRun=0;HaplotypeScore=0.0000;MQ=38.92;MQ0=0;MQRankSum=1.281;Map20=1;OAnc=G;QD=36.91;ReadPosRankSum=0.000;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=895;mSC=0.029;pSC=0.902	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:98.43:1731,98,0:0,0:1,0:23,21:0,0:0:38.92:0;0/0:35:99:0,105,1364:0,0:21,14:0,0:0,0:0:37.00:0	-
1_169660939_T/C	1	169660939	C	ENSG00000188404	ENST00000236147	Transcript	NON_SYNONYMOUS_CODING	1305	1144	382	D/N	Gat/Aat	-	ENSP=ENSP00000236147;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SELL	T	T/T,C/C	C	C	C	H/H,A/A	rs4987382	0.95	.	4.1	0.322	0.835	738	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.18;AMR_AF=0.01;AN=4;CAnc=C;DP=90;GAnc=C;GRP=4.1;HRun;MQ=40.33;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=738;mSC=0.322;pSC=0.835	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,157,2048:0,0:0,0:0,0:34,18:0:40.33:0;1/1:38:99:1489,114,0:0,0:21,17:0,0:0,0:0:37.00:0	-
1_171178090_T/C	1	171178090	C	ENSG00000094963	ENST00000209929	Transcript	STOP_GAINED	1572	1414	472	Q/*	Cag/Tag	-	ENSP=ENSP00000209929;HGNC=FMO2	T	T/T,C/C	C	C	C	H/H,A/A	rs6661174	0.96	.	5.99	0.999	0.398	664	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.01;AN=4;CAnc=C;DP=66;GAnc=C;GRP=5.99;HRun=0;MQ=38.52;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=664;mSC=0.999;pSC=0.398	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:99:0,114,1492:0,0:0,0:0,0:20,19:0:38.52:0;1/1:27:81.26:1059,81,0:0,0:13,14:0,0:0,0:0:37.00:0	+
1_179380284_A/G	1	179380284	G	ENSG00000162779	ENST00000360322	Transcript	NON_SYNONYMOUS_CODING	1500	987	329	M/I	atG/atA	-	ENSP=ENSP00000353471;PolyPhen=benign(0.248);SIFT=tolerated(0.23);HGNC=AXDND1	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	1.41	0.999	0.974	545	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=88;GAnc=G;GRP=1.41;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,-,G,G;bSC=545;mSC=0.999;pSC=0.974	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:59:99:0,175,2314:27,32:0,0:0,0:0,0:0:37.00:0;1/1:29:87.28:1139,87,0:0,0:0,0:11,18:0,0:0:37.00:0	+
1_182496791_T/G	1	182496791	G	ENSG00000121446	ENST00000294854	Transcript	NON_SYNONYMOUS_CODING	2029	2009	670	S/I	aGc/aTc	-	ENSP=ENSP00000457748;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RGSL1	T	G/G,T/T	G	G	G	A/A,H/H	rs112168593	0.99	.	-8.71	0.000	0.062	802	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AN=4;BaseQRankSum=1.654;CAnc=G;DP=81;Dels=0.00;FS=4.674;GAnc=G;GRP=-8.71;HRun=0;HaplotypeScore=0.9933;MQ=38.32;MQ0=0;MQRankSum=-0.079;Map20=1;OAnc=G;QD=35.98;ReadPosRankSum=0.394;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=802;mSC=0.000;pSC=0.062	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1652,105,0:0,0:0,0:30,14:0,1:0:38.32:0;0/0:36:99:0,108,1416:0,0:0,0:0,0:18,18:0:37.00:0	+
1_182499957_A/G	1	182499957	G	ENSG00000121446	ENST00000294854	Transcript	NON_SYNONYMOUS_CODING	2296	2276	759	R/H	cGc/cAc	-	ENSP=ENSP00000457748;PolyPhen=benign(0);SIFT=tolerated(0.4);HGNC=RGSL1	A	G/G,A/A	G	G	G	A/A,H/H	rs147958249	1.0	CpG	-5.75	0.000	0.010	803	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;CpG;DP=66;Dels=0.00;FS=0.000;GAnc=G;GRP=-5.75;HRun=0;HaplotypeScore=1.5781;MQ=39.43;MQ0=0;Map20=1;OAnc=G;QD=37.96;TS=HPGOMC;TSseq=A,G,A,G,G,G;UR;bSC=803;mSC=0.000;pSC=0.010	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1855,141,0:0,0:0,0:22,25:0,1:0:39.43:0;0/0:18:54.17:0,54,706:12,6:0,0:0,0:0,0:0:37.00:0	+
1_182569446_T/G	1	182569446	G	ENSG00000143333	ENST00000367558	Transcript	NON_SYNONYMOUS_CODING	739	590	197	A/D	gCc/gAc	-	ENSP=ENSP00000356529;PolyPhen=benign(0);SIFT=tolerated(0.91);HGNC=RGS16	T	G/G,T/T	G	G	G	A/A,H/H	rs116402450	0.93	.	2.21	0.004	0.949	738	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.11;AMR_AF=0.03;AN=4;ASN_AF=0.04;CAnc=G;DP=51;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=G;GRP=2.21;HRun;HaplotypeScore=0.9958;MQ=39.17;MQ0=0;Map20=1;OAnc=G;QD=37.61;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=738;mSC=0.004;pSC=0.949	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1387,108,0:0,0:0,0:22,13:0,0:0:39.17:0;0/0:15:45.15:0,45,600:0,0:0,0:0,0:8,7:0:37.00:0	-
1_183592594_A/G	1	183592594	G	ENSG00000162704	ENST00000367534	Transcript	STOP_GAINED	429	406	136	R/*	Cga/Tga	-	ENSP=ENSP00000356504;HGNC=ARPC5	A	A/A,G/G	G	G	G	H/H,A/A	rs16861256	0.92	CpG	0.399	0.000	0.194	703	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.08;AFR_AF=0.17;AMR_AF=0.04;AN=4;ASN_AF=0.07;CAnc=G;CpG;DP=61;EUR_AF=0.03;GAnc=G;GRP=0.399;HRun=0;MQ=38.55;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=703;mSC=0.000;pSC=0.194	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,111,1458:15,22:0,0:0,0:0,0:0:38.55:0;1/1:23:69.23:914,69,0:0,0:0,0:10,13:0,0:0:37.00:0	-
1_184723721_T/G	1	184723721	G	ENSG00000116406	ENST00000318130	Transcript	NON_SYNONYMOUS_CODING	327	60	20	S/R	agC/agA	-	ENSP=ENSP00000318147;PolyPhen=benign(0);SIFT=tolerated(0.93);HGNC=EDEM3	T	G/G,G/G	G	G	G	A/A,A/A	rs193034365	0.99	.	4.76	1.000	0.361	464	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.04;BaseQRankSum=0.299;CAnc=G;DP=42;Dels=0.00;FS=5.441;GAnc=G;GRP=4.76;HRun;HaplotypeScore=0.8667;MQ=37.00;MQ0=0;MQRankSum=1.614;Map20=1;OAnc=G;QD=34.56;ReadPosRankSum=1.614;TS=HPGOMC;TSseq=T,G,G,G,G,N;UR;bSC=464;mSC=1.000;pSC=0.361	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:47.24:1035,47,0:0,0:0,0:8,19:1,0:0:37.00:0;1/1:13:36.12:473,36,0:0,0:0,0:5,8:0,0:0:37.00:0	-
1_186646005_C/T	1	186646005	T	ENSG00000073756	ENST00000367468	Transcript	NON_SYNONYMOUS_CODING	820	683	228	H/R	cAt/cGt	-	ENSP=ENSP00000356438;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=PTGS2	C	T/T,C/C	T	T	T	A/A,H/H	rs3218622	1.0	CpG	5.51	1.000	0.741	470	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AN=4;ASN_AF=0.01;BaseQRankSum=0.272;CAnc=T;CpG;DP=81;Dels=0.00;FS=0.000;GAnc=T;GRP=5.51;HRun=0;HaplotypeScore=2.8821;MQ=39.29;MQ0=0;MQRankSum=-0.421;Map20=1;OAnc=T;QD=34.49;ReadPosRankSum=-0.173;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=470;mSC=1.000;pSC=0.741	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:70.47:1792,70,0:0,0:1,1:0,0:19,30:0:39.29:0;0/0:30:47.28:0,47,1059:0,0:21,8:0,0:1,0:0:37.00:0	-
1_196711067_G/T	1	196711067	T	ENSG00000000971	ENST00000367429	Transcript	NON_SYNONYMOUS_CODING	3259	3019	1007	L/V	Ttg/Gtg	-	ENSP=ENSP00000356399;PolyPhen=benign(0);SIFT=tolerated(0.71);HGNC=CFH	G	G/G,T/T	T	-	T	H/H,A/A	rs534399	0.93	.	0.214	0.000	.	515	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.32;AMR_AF=0.02;AN=4;CAnc=T;DP=56;GRP=0.214;HRun;MQ=37.77;MQ0=0;Map20=1;OAnc=T;TS=HPO;TSseq=G,T,T;bSC=515;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:77.37:0,77,1457:1,0:0,0:28,10:0,0:0:37.77:0;1/1:17:51.16:666,51,0:0,0:0,0:0,0:12,5:0:37.00:0	+
1_197019858_A/C	1	197019858	C	ENSG00000143278	ENST00000367412	Transcript	NON_SYNONYMOUS_CODING	1751	1707	569	E/D	gaG/gaT	-	ENSP=ENSP00000356382;PolyPhen=benign(0.006);SIFT=tolerated(1);HGNC=F13B	A	C/C,A/A	C	C	C	A/A,H/H	rs6000	0.98	.	-8.98	0.011	0.834	220	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=C;DP=76;Dels=0.00;FS=0.000;GAnc=C;GRP=-8.98;HRun=2;HaplotypeScore=0.0000;MQ=39.85;MQ0=0;Map20=1;OAnc=C;QD=37.70;TS=HPGOM;TSseq=A,C,C,C,C;bSC=220;mSC=0.011;pSC=0.834	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1956,150,0:0,0:25,25:0,0:0,0:0:39.85:0;0/0:25:75.24:0,75,979:15,10:0,0:0,0:0,0:0:37.00:0	-
1_197070594_A/G	1	197070594	G	ENSG00000066279	ENST00000367406	Transcript	NON_SYNONYMOUS_CODING	1745	1745	582	A/V	gCa/gTa	-	ENSP=ENSP00000356376;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ASPM	A	G/G,A/A	G	G	G	A/A,H/H	rs79572771	0.99	.	3.63	0.000	0.821	198	0.5	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.01;BaseQRankSum=0.102;CAnc=G;DP=103;Dels=0.00;FS=5.772;GAnc=G;GRP=3.63;HRun=0;HaplotypeScore=2.9992;MQ=37.88;MQ0=0;MQRankSum=-0.611;Map20=0.5;OAnc=G;QD=37.87;ReadPosRankSum=-0.662;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=198;mSC=0.000;pSC=0.821	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2608,165,0:1,0:0,0:16,50:0,0:0:37.88:0;0/0:35:99:0,105,1372:16,19:0,0:0,0:0,0:0:37.00:0	-
1_197072560_A/G	1	197072560	G	ENSG00000066279	ENST00000367409	Transcript	NON_SYNONYMOUS_CODING	6078	5821	1941	R/C	Cgt/Tgt	-	ENSP=ENSP00000356379;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ASPM	A	G/G,A/A	G	G	G	A/A,H/H	rs61249253	0.99	CpG	5.62	0.047	0.576	198	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=65;Dels=0.00;FS=0.000;GAnc=G;GRP=5.62;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.74;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=198;mSC=0.047;pSC=0.576	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1621,123,0:0,0:0,0:16,25:0,0:0:37.00:0;0/0:24:72.23:0,72,953:12,12:0,0:0,0:0,0:0:37.00:0	-
1_197112477_C/T	1	197112477	T	ENSG00000066279	ENST00000294732	Transcript	NON_SYNONYMOUS_CODING	1162	905	302	Y/C	tAt/tGt	-	ENSP=ENSP00000294732;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=ASPM	C	T/T,C/C	T	T	T	A/A,H/H	rs77736715	1.0	.	-4.17	0.163	0.250	173	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=T;DP=98;Dels=0.00;FS=0.000;GAnc=T;GRP=-4.17;HRun=0;HaplotypeScore=3.9781;MQ=40.10;MQ0=0;Map20=1;OAnc=T;QD=38.48;TS=HPGOMC;TSseq=C,T,T,-,T,C;bSC=173;mSC=0.163;pSC=0.250	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2188,169,0:0,0:0,0:0,0:27,29:0:40.10:0;0/0:42:99:0,120,1569:0,0:13,29:0,0:0,0:0:37.00:0	-
1_198676063_A/C	1	198676063	C	ENSG00000081237	ENST00000348564	Transcript	NON_SYNONYMOUS_CODING	489	397	133	L/I	Cta/Ata	-	ENSP=ENSP00000306782;PolyPhen=benign(0.038);SIFT=tolerated(0.34);HGNC=PTPRC	A	C/C,C/C	C	C	A	A/A,A/A	rs2230606	0.99	.	-9.44	0.000	0.007	755	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=C;DP=74;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=-9.44;HRun=0;HaplotypeScore=0.9916;MQ=37.53;MQ0=0;Map20=1;OAnc=A;QD=38.51;TS=HPGOMC;TSseq=A,C,C,A,A,A;UR;bSC=755;mSC=0.000;pSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1496,114,0:0,0:14,22:0,0:0,0:0:37.53:0;1/1:36:99:1412,108,0:0,0:15,21:0,0:0,0:0:37.00:0	+
1_201869716_C/T	1	201869716	T	ENSG00000163431	ENST00000367288	Transcript	NON_SYNONYMOUS_CODING	672	425	142	D/G	gAt/gGt	-	ENSP=ENSP00000356257;PolyPhen=benign(0);SIFT=tolerated(0.74);HGNC=LMOD1	C	C/C,T/C	T	T	T	H/H,A/H	rs35110687	0.99	.	4.61	0.006	0.973	305	0.5	1000gALT=T;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=T;DP=65;GAnc=T;GRP=4.61;HRun=0;MQ=37.77;MQ0=0;Map20=0.5;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=305;mSC=0.006;pSC=0.973	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:99:0,114,1489:0,0:14,24:0,0:1,0:0:37.77:0;0/1:26:99:471,0,402:0,0:5,7:0,0:6,8:0:37.00:0	-
1_204966474_G/A	1	204966474	A	ENSG00000163531	ENST00000338515	Transcript	NON_SYNONYMOUS_CODING	3608	3280	1094	T/A	Acc/Gcc	-	ENSP=ENSP00000342128;PolyPhen=benign(0.001);SIFT=tolerated(0.62);HGNC=NFASC	G	A/A,A/A	A	A	A	A/A,A/A	rs183209390	1.0	CpG	-3	0.069	0.942	767	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=A;CpG;DP=57;Dels=0.00;FS=0.000;GAnc=A;GRP=-3;HRun=0;HaplotypeScore=0.8321;MQ=37.75;MQ0=0;Map20=1;OAnc=A;QD=37.66;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=767;mSC=0.069;pSC=0.942	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1539,117,0:14,24:0,0:0,0:0,0:0:37.75:0;1/1:17:51.15:651,51,0:3,14:0,0:0,0:0,0:0:37.00:0	+
1_206225011_G/C	1	206225011	C	ENSG00000198049	ENST00000367126	Transcript	NON_SYNONYMOUS_CODING	1036	571	191	R/G	Cgc/Ggc	-	ENSP=ENSP00000356094;PolyPhen=benign(0.006);SIFT=tolerated(0.29);HGNC=AVPR1B	G	C/C,C/C	C	C	C	A/A,A/A	rs33990840	0.95	CpG	4.98	0.998	0.759	878	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.12;AMR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=62;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=4.98;HRun;HaplotypeScore=0.0000;MQ=37.71;MQ0=0;Map20=1;OAnc=C;QD=38.25;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=878;mSC=0.998;pSC=0.759	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1640,126,0:0,0:22,20:0,0:0,0:0:37.71:0;1/1:20:60.19:792,60,0:0,0:8,12:0,0:0,0:0:37.00:0	+
1_207196337_T/C	1	207196337	C	ENSG00000182795	ENST00000359470	Transcript	NON_SYNONYMOUS_CODING	1022	772	258	G/R	Ggg/Agg	-	ENSP=ENSP00000352447;PolyPhen=benign(0);SIFT=tolerated(0.61);HGNC=C1orf116	T	T/T,C/C	C	C	C	H/H,A/A	rs12062114	0.93	CpG	3.22	0.001	0.093	572	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.27;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=59;GAnc=C;GRP=3.22;HRun=2;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=572;mSC=0.001;pSC=0.093	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:65.34:0,65,1320:0,0:0,1:0,0:15,20:0:37.00:0;1/1:23:69.22:897,69,0:0,0:12,11:0,0:0,0:0:37.00:0	-
1_207196639_T/G	1	207196639	G	ENSG00000182795	ENST00000359470	Transcript	NON_SYNONYMOUS_CODING	720	470	157	T/N	aCc/aAc	-	ENSP=ENSP00000352447;PolyPhen=benign(0);SIFT=tolerated(0.65);HGNC=C1orf116	T	G/G,G/G	G	G	G	A/A,A/A	rs34660159	0.93	.	-6.73	0.000	0.323	572	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.29;AMR_AF=0.02;AN=4;CAnc=G;DP=66;Dels=0.00;FS=0.000;GAnc=G;GRP=-6.73;HRun=3;HaplotypeScore=0.0000;MQ=38.26;MQ0=0;Map20=1;OAnc=G;QD=38.60;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=572;mSC=0.000;pSC=0.323	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1847,141,0:0,0:0,0:26,21:0,0:0:38.26:0;1/1:19:57.18:740,57,0:0,0:0,0:10,9:0,0:0:37.00:0	-
1_207196790_T/C	1	207196790	C	ENSG00000182795	ENST00000359470	Transcript	NON_SYNONYMOUS_CODING	569	319	107	A/T	Gcg/Acg	-	ENSP=ENSP00000352447;PolyPhen=benign(0);SIFT=tolerated(0.79);HGNC=C1orf116	T	C/C,C/C	C	C	C	A/A,A/A	rs35299018	0.93	.	2.6	0.066	0.011	572	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.27;AMR_AF=0.02;AN=4;CAnc=C;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=2.6;HRun=0;HaplotypeScore=0.0000;MQ=39.05;MQ0=0;Map20=1;OAnc=C;QD=37.63;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=572;mSC=0.066;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1651,129,0:0,0:16,26:0,0:0,0:0:39.05:0;1/1:20:60.20:800,60,0:0,0:9,11:0,0:0,0:0:37.00:0	-
1_207868022_G/T	1	207868022	T	ENSG00000197721	ENST00000444269	Transcript	NON_SYNONYMOUS_CODING	909	788	263	V/G	gTc/gGc	-	ENSP=ENSP00000437875;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CR1L	G	T/T,T/T	T	T	T	A/A,A/A	rs72468038	0.98	.	1.24	0.005	0.119	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;CAnc=T;DP=56;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=1.24;HRun=0;HaplotypeScore=0.0000;MQ=36.81;MQ0=0;Map20=1;OAnc=T;QD=37.51;TS=HPGOM;TSseq=G,T,T,T,T;mSC=0.005;pSC=0.119	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1458,114,0:0,0:0,0:0,0:25,13:0:36.81:0;1/1:18:54.17:702,54,0:0,0:0,0:0,0:10,8:0:37.00:0	+
1_208391098_T/C	1	208391098	C	ENSG00000076356	ENST00000367033	Transcript	NON_SYNONYMOUS_CODING	928	170	57	R/Q	cGa/cAa	-	ENSP=ENSP00000356000;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=PLXNA2	T	C/C,C/C	C	C	C	A/A,A/A	rs11119014	0.94	CpG	1.91	0.248	0.533	822	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.02;AMR_AF=0.07;AN=4;ASN_AF=0.10;CAnc=C;CpG;DP=55;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=1.91;HRun=0;HaplotypeScore=0.0000;MQ=37.73;MQ0=0;Map20=1;OAnc=C;QD=38.43;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=822;mSC=0.248;pSC=0.533	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1609,123,0:0,0:20,21:0,0:0,0:0:37.73:0;1/1:14:39.12:500,39,0:0,0:10,3:0,0:1,0:0:37.00:0	-
1_212799040_G/C	1	212799040	C	ENSG00000162771	ENST00000294829	Transcript	NON_SYNONYMOUS_CODING	1252	821	274	A/G	gCg/gGg	-	ENSP=ENSP00000294829;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAM71A	G	G/G,C/C	C	C	C	H/H,A/A	.	1.0	CpG,RM	-4.17	0.000	0.212	856	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;CpG;DP=56;GAnc=C;GRP=-4.17;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=C;RM;TS=HPGOMC;TSseq=G,C,C,C,T,T;bSC=856;mSC=0.000;pSC=0.212	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,111,1453:0,0:0,0:20,16:0,0:0:37.00:0;1/1:19:54.18:716,54,0:0,0:11,7:0,0:1,0:0:37.00:0	+
1_215821939_C/T	1	215821939	T	ENSG00000042781	ENST00000307340	Transcript	NON_SYNONYMOUS_CODING	14900	14513	4838	E/G	gAg/gGg	-	ENSP=ENSP00000305941;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=USH2A	C	T/T,T/T	T	T	T	A/A,A/A	rs41315587	0.98	.	4.48	0.865	0.097	639	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.05;BaseQRankSum=1.358;CAnc=T;DP=67;Dels=0.00;FS=0.000;GAnc=T;GRP=4.48;HRun=0;HaplotypeScore=2.9992;MQ=36.62;MQ0=0;MQRankSum=0.047;Map20=1;OAnc=T;QD=35.90;ReadPosRankSum=1.077;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=639;mSC=0.865;pSC=0.097	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:71.34:1361,71,0:0,0:0,1:0,0:16,20:0:36.62:0;1/1:30:90.29:1174,90,0:0,0:0,0:0,0:14,16:0:37.00:0	-
1_223177974_G/A	1	223177974	A	ENSG00000154309	ENST00000284476	Transcript	NON_SYNONYMOUS_CODING	3399	3235	1079	M/V	Atg/Gtg	-	ENSP=ENSP00000284476;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DISP1	G	A/A,A/A	A	A	A	A/A,A/A	rs76611705	0.98	CpG	5.95	1.000	0.964	619	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;ASN_AF=0.06;CAnc=A;CpG;DP=65;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=5.95;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=37.52;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=619;mSC=1.000;pSC=0.964	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:93.30:1234,93,0:17,14:0,1:0,0:0,0:0:37.00:0;1/1:33:59.29:1210,59,0:16,16:0,0:0,1:0,0:0:37.00:0	+
1_227152778_T/G	1	227152778	G	ENSG00000163050	ENST00000366777	Transcript	NON_SYNONYMOUS_CODING	376	255	85	Q/H	caG/caT	-	ENSP=ENSP00000355739;PolyPhen=benign(0);SIFT=tolerated(0.61);HGNC=ADCK3	T	G/G,G/G	G	G	G	A/A,A/A	rs2297411	0.96	.	4.43	0.008	0.968	511	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.12;AMR_AF=0.01;AN=4;ASN_AF=0.04;CAnc=G;DP=54;Dels=0.00;FS=0.000;GAnc=G;GRP=4.43;HRun;HaplotypeScore=0.0000;MQ=37.85;MQ0=0;Map20=1;OAnc=G;QD=38.50;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=511;mSC=0.008;pSC=0.968	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1380,105,0:0,0:0,0:12,22:0,0:0:37.85:0;1/1:19:57.16:703,57,0:0,0:0,0:9,10:0,0:0:36.47:0	+
1_228336518_A/G	1	228336518	G	ENSG00000143774	ENST00000366728	Transcript	NON_SYNONYMOUS_CODING	704	691	231	G/R	Gga/Aga	-	ENSP=ENSP00000355689;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GUK1	A	A/A,G/G	G	G	G	H/H,A/A	rs15109	0.99	.	0.558	0.000	0.023	436	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;ASN_AF=0.02;CAnc=G;DP=53;GAnc=G;GRP=0.558;HRun=2;MQ=40.39;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=436;mSC=0.000;pSC=0.023	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:34:95.33:0,95,1213:15,17:0,0:0,0:1,0:0:40.39:0;1/1:19:57.17:745,57,0:0,0:0,0:9,10:0,0:0:37.00:0	+
1_228555619_A/T	1	228555619	T	ENSG00000154358	ENST00000366707	Transcript	NON_SYNONYMOUS_CODING	21250	12563	4188	F/Y	tTc/tAc	-	ENSP=ENSP00000355668;PolyPhen=benign(0);HGNC=OBSCN	A	A/A,T/T	T	T	T	H/H,A/A	.	1	.	3.86	1.000	0.163	348	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=51;GAnc=T;GRP=3.86;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=348;mSC=1.000;pSC=0.163	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:34:99:0,102,1325:19,12:0,0:0,0:0,0:0:37.00:0;1/1:17:51.17:674,51,0:0,0:0,0:0,0:9,8:0:37.00:0	+
1_228699943_A/G	1	228699943	G	ENSG00000215811	ENST00000400948	Transcript	NON_SYNONYMOUS_CODING	62	62	21	P/L	cCg/cTg	-	ENSP=ENSP00000383732;PolyPhen=probably_damaging(0.961);SIFT=tolerated(0.06)	A	G/G,A/A	G	G	G	A/A,H/H	rs185286334	1.0	CpG	2.64	.	0.073	702	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=61;Dels=0.00;FS=0.000;GAnc=G;GRP=2.64;HRun=2;HaplotypeScore=1.9864;MQ=37.73;MQ0=0;Map20=1;OAnc=G;QD=37.83;TS=HPGOM;TSseq=A,G,G,G,A;bSC=702;pSC=0.073	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1584,120,0:0,0:0,0:22,19:0,0:0:37.73:0;0/0:20:60.20:0,60,800:10,10:0,0:0,0:0,0:0:37.00:0	-
1_233313594_G/T	1	233313594	T	ENSG00000135749	ENST00000258229	Transcript	NON_SYNONYMOUS_CODING	3462	3227	1076	E/A	gAa/gCa	-	ENSP=ENSP00000258229;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PCNXL2	G	T/T,G/G	T	T	T	A/A,H/H	rs41307684	0.99	.	4.05	0.954	0.757	863	0.5	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.02;AN=4;CAnc=T;DP=90;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=4.05;HRun;HaplotypeScore=0.0000;MQ=37.48;MQ0=0;Map20=0.5;OAnc=T;QD=36.80;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=863;mSC=0.954;pSC=0.757	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2315,178,0:0,0:0,0:0,0:33,28:0:37.48:0;0/0:28:84.27:0,84,1104:0,0:0,0:16,12:0,0:0:37.00:0	-
1_233463785_G/C	1	233463785	C	ENSG00000143674	ENST00000366623	Transcript	NON_SYNONYMOUS_CODING	272	11	4	P/R	cCg/cGg	-	ENSP=ENSP00000355582;PolyPhen=unknown(0);SIFT=tolerated(1)	G	C/C,C/C	C	C	C	A/A,A/A	rs78916182	0.91	CpG	1.8	0.000	0.069	890	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.10;AMR_AF=0.08;AN=4;ASN_AF=0.06;CAnc=C;CpG;DP=33;Dels=0.00;EUR_AF=0.12;FS=0.000;GAnc=C;GRP=1.8;HRun;HaplotypeScore=0.0000;MQ=38.48;MQ0=0;Map20=1;OAnc=C;QD=38.00;TS=HPGOMC;TSseq=G,C,N,N,C,C;bSC=890;mSC=0.000;pSC=0.069	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:20:60.20:793,60,0:0,0:11,9:0,0:0,0:0:38.48:0;1/1:13:39.12:507,39,0:0,0:9,4:0,0:0,0:0:37.00:0	+
1_235897907_C/T	1	235897907	T	ENSG00000143669	ENST00000389793	Transcript	NON_SYNONYMOUS_CODING	8586	8411	2804	D/G	gAt/gGt	-	ENSP=ENSP00000374443;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LYST	C	T/T,T/T	T	T	T	A/A,A/A	rs35333195	0.97	.	2.66	0.000	0.973	208	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=T;DP=95;Dels=0.00;FS=0.000;GAnc=T;GRP=2.66;HRun=0;HaplotypeScore=0.0000;MQ=39.79;MQ0=0;Map20=1;OAnc=T;QD=38.76;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=208;mSC=0.000;pSC=0.973	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2049,157,0:0,0:0,0:0,0:25,27:0:39.79:0;1/1:43:99:1687,129,0:0,0:0,0:0,0:26,17:0:37.00:0	-
1_235963637_T/G	1	235963637	G	ENSG00000143669	ENST00000389793	Transcript	NON_SYNONYMOUS_CODING	4164	3989	1330	A/D	gCt/gAt	-	ENSP=ENSP00000374443;PolyPhen=benign(0);SIFT=tolerated(0.79);HGNC=LYST	T	G/G,G/G	G	G	G	A/A,A/A	rs74641549	0.97	.	4.64	0.986	0.784	207	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=G;DP=88;Dels=0.00;FS=0.000;GAnc=G;GRP=4.64;HRun=0;HaplotypeScore=0.0000;MQ=39.51;MQ0=0;Map20=1;OAnc=G;QD=38.25;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=207;mSC=0.986;pSC=0.784	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2251,175,0:0,0:0,0:34,24:0,0:0:39.51:0;1/1:30:90.28:1177,90,0:0,0:0,0:12,18:0,0:0:37.00:0	-
1_235969386_C/T	1	235969386	T	ENSG00000143669	ENST00000389793	Transcript	NON_SYNONYMOUS_CODING	3225	3050	1017	N/S	aAt/aGt	-	ENSP=ENSP00000374443;PolyPhen=benign(0);SIFT=tolerated(0.41);HGNC=LYST	C	T/T,T/T	T	T	T	A/A,A/A	rs10465613	0.97	.	-7.31	0.000	0.787	207	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=T;DP=107;Dels=0.00;FS=0.000;GAnc=T;GRP=-7.31;HRun=2;HaplotypeScore=0.9997;MQ=38.29;MQ0=0;Map20=1;OAnc=T;QD=39.30;TS=HPGOMC;TSseq=C,T,T,T,G,T;UR;bSC=207;mSC=0.000;pSC=0.787	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:69:99:2745,208,0:0,0:0,0:0,0:23,46:0:38.29:0;1/1:38:99:1499,114,0:0,0:0,0:0,0:16,22:0:37.00:0	-
1_235973544_A/C	1	235973544	C	ENSG00000143669	ENST00000389793	Transcript	NON_SYNONYMOUS_CODING	749	574	192	V/L	Gta/Tta	-	ENSP=ENSP00000374443;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=LYST	A	C/C,C/C	C	C	C	A/A,A/A	rs7524261	0.97	.	2.51	0.006	0.973	207	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=C;DP=93;Dels=0.00;FS=0.000;GAnc=C;GRP=2.51;HRun=0;HaplotypeScore=1.9880;MQ=37.09;MQ0=0;Map20=1;OAnc=C;QD=38.16;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=207;mSC=0.006;pSC=0.973	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2246,175,0:0,0:28,29:0,0:0,0:0:37.09:0;1/1:35:99:1343,102,0:1,0:18,16:0,0:0,0:0:37.00:0	-
1_242045275_C/T	1	242045275	T	ENSG00000174371	ENST00000348581	Transcript	NON_SYNONYMOUS_CODING	2481	2167	723	R/C	Cgt/Tgt	-	ENSP=ENSP00000311873;PolyPhen=benign(0.222);SIFT=tolerated(0.13);HGNC=EXO1	T	C/C,C/C	C	C	C	A/A,A/A	rs1635498	0.92	CpG	1.84	0.035	0.674	866	1	1000gALT=T;AC=0;AF=0.00;AF1000g=0.92;AFR_AF=0.87;AMR_AF=0.98;AN=4;ASN_AF=0.84;CAnc=C;CpG;DP=78;EUR_AF=0.96;GAnc=C;GRP=1.84;MQ=38.41;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=866;mSC=0.035;pSC=0.674	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:50:99:0,110,1893:0,0:30,19:0,0:0,1:0:38.41:0;0/0:28:44.26:0,44,1014:0,0:13,14:0,0:1,0:0:37.00:0	+
1_245582905_A/G	1	245582905	G	ENSG00000162849	ENST00000407071	Transcript	NON_SYNONYMOUS_CODING	1464	1024	342	G/S	Ggc/Agc	-	ENSP=ENSP00000385545;PolyPhen=unknown(0);SIFT=tolerated(0.49);HGNC=KIF26B	A	G/G,G/G	G	G	-	A/A,A/A	.	1	.	3.71	0.438	0.561	958	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=3.71;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;QD=36.97;TS=HPG;TSseq=A,G,G;bSC=958;mSC=0.438;pSC=0.561	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:87.28:1142,87,0:0,1:0,0:11,18:0,0:0:37.00:0;1/1:22:66.21:856,66,0:0,0:0,0:7,15:0,0:0:37.00:0	+
1_247614693_C/T	1	247614693	T	ENSG00000177535	ENST00000318749	Transcript	NON_SYNONYMOUS_CODING	616	592	198	V/M	Gtg/Atg	-	ENSP=ENSP00000325682;PolyPhen=benign(0.008);SIFT=tolerated(0.23);HGNC=OR2B11	T	C/T,T/T	C	C	-	A/H,H/H	rs6695302	0.91	.	-1.39	.	0.028	862	1	1000gALT=T;AC=3;AF=0.75;AF1000g=0.91;AFR_AF=0.64;AMR_AF=0.98;AN=4;ASN_AF=1.00;BaseQRankSum=-0.516;CAnc=C;DP=56;Dels=0.00;EUR_AF=1.00;FS=1.451;GAnc=C;GRP=-1.39;HRun=0;HaplotypeScore=0.9997;MQ=38.49;MQ0=0;MQRankSum=-1.094;Map20=1;QD=8.90;ReadPosRankSum=0.846;TS=HPGM;TSseq=C,C,C,C;bSC=862;pSC=0.028	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:33:99:324,0,696:0,0:9,11:0,0:8,5:0:38.49:0;1/1:23:69.22:891,69,0:0,0:0,0:0,0:12,11:0:37.00:0	-
1_247615251_A/G	1	247615251	G	ENSG00000177535	ENST00000318749	Transcript	NON_SYNONYMOUS_CODING	58	34	12	P/S	Ccc/Tcc	-	ENSP=ENSP00000325682;PolyPhen=benign(0);SIFT=tolerated(0.1);HGNC=OR2B11	A	A/A,G/G	G	G	-	H/H,A/A	rs147030298	1.0	.	-2.12	.	0.513	867	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=G;DP=75;Dels=0.01;GAnc=G;GRP=-2.12;HRun=4;MQ=37.57;MQ0=0;Map20=1;TS=HPGM;TSseq=A,G,G,G;bSC=867;pSC=0.513	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:49:99:0,104,1802:27,20:0,0:1,0:0,0:0:37.57:0;1/1:25:72.23:952,72,0:0,0:0,0:15,10:0,0:0:37.00:0	-
1_247886615_G/A	1	247886615	A	ENSG00000241128	ENST00000366485	Transcript	NON_SYNONYMOUS_CODING	731	731	244	I/T	aTt/aCt	-	ENSP=ENSP00000355441;PolyPhen=benign(0.006);SIFT=tolerated(1);HGNC=OR14A2	G	A/A,A/A	A	A	A	A/A,A/A	rs11809582	0.91	.	0.333	0.000	.	958	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.30;AMR_AF=0.06;AN=4;CAnc=A;DP=93;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=A;GRP=0.333;HRun;HaplotypeScore=0.9997;MQ=37.53;MQ0=0;Map20=1;OAnc=A;QD=38.14;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=958;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2207,169,0:42,14:0,0:0,0:0,0:0:37.53:0;1/1:36:99:1414,108,0:19,17:0,0:0,0:0,0:0:37.00:0	-
2_15542337_C/G	2	15542337	G	ENSG00000151779	ENST00000281513	Transcript	NON_SYNONYMOUS_CODING	3052	3026	1009	S/C	tCt/tGt	-	ENSP=ENSP00000281513;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NBAS	C	G/C,C/C	G	G	G	A/H,H/H	rs74411619	0.95	.	2.87	0.002	0.534	479	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.05;AFR_AF=0.10;AMR_AF=0.04;AN=4;ASN_AF=0.07;BaseQRankSum=0.547;CAnc=G;DP=68;Dels=0.00;FS=2.911;GAnc=G;GRP=2.87;HRun=0;HaplotypeScore=0.0000;MQ=38.96;MQ0=0;MQRankSum=-1.505;Map20=1;OAnc=G;QD=18.60;ReadPosRankSum=2.107;TS=HPGOMC;TSseq=C,G,G,C,G,G;UR;bSC=479;mSC=0.002;pSC=0.534	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:40:99:774,0,554:0,0:12,5:13,10:0,0:0:38.96:0;0/0:28:84.28:0,84,1115:0,0:14,14:0,0:0,0:0:37.00:0	-
2_17698085_C/T	2	17698085	T	ENSG00000214842	ENST00000399080	Transcript	NON_SYNONYMOUS_CODING	1622	1598	533	Y/C	tAt/tGt	-	ENSP=ENSP00000382030;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RAD51AP2	C	T/T,T/T	T	T	T	A/A,A/A	rs62130402	0.98	.	-4.8	0.002	0.359	546	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.03;AMR_AF=0.04;AN=4;BaseQRankSum=1.519;CAnc=T;DP=89;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=-4.8;HRun=0;HaplotypeScore=1.9976;MQ=40.49;MQ0=0;MQRankSum=-1.359;Map20=1;OAnc=T;QD=37.04;ReadPosRankSum=0.986;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=546;mSC=0.002;pSC=0.359	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:66:99:2478,163,0:0,0:0,1:0,0:22,41:0:40.49:0;1/1:23:69.22:895,69,0:0,0:0,0:0,0:7,16:0:37.00:0	-
2_23980327_A/G	2	23980327	G	ENSG00000119778	ENST00000238789	Transcript	NON_SYNONYMOUS_CODING	4383	4039	1347	P/S	Cct/Tct	-	ENSP=ENSP00000238789;PolyPhen=benign(0);SIFT=tolerated(0.83);HGNC=ATAD2B	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	1.09	0.896	0.914	189	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=73;GAnc=G;GRP=1.09;HRun;MQ=39.05;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=189;mSC=0.896;pSC=0.914	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,126,1662:19,24:0,0:0,0:0,0:0:39.05:0;1/1:30:90.28:1168,90,0:0,0:0,0:13,17:0,0:0:37.00:0	-
2_27551325_G/A	2	27551325	A	ENSG00000115207	ENST00000415683	Transcript	STOP_LOST	471	472	158	*/R	Tga/Cga	-	ENSP=ENSP00000414422;HGNC=GTF3C2	G	A/A,A/A	A	A	A	A/A,A/A	rs6721927	0.93	CpG	4.07	0.993	0.943	68	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.29;AMR_AF=0.03;AN=4;CAnc=A;CpG;DP=76;Dels=0.00;FS=0.000;GAnc=A;GRP=4.07;HRun=0;HaplotypeScore=0.0000;MQ=38.80;MQ0=0;Map20=1;OAnc=A;QD=36.15;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=68;mSC=0.993;pSC=0.943	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1804,138,0:33,16:0,0:0,0:0,0:0:38.80:0;1/1:27:81.26:1070,81,0:10,17:0,0:0,0:0,0:0:37.00:0	-
2_37041439_C/T	2	37041439	T	ENSG00000205221	ENST00000379241	Transcript	NON_SYNONYMOUS_CODING	2032	1906	636	Y/H	Tat/Cat	-	ENSP=ENSP00000368543;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=VIT	C	T/T,T/T	T	T	T	A/A,A/A	rs11901202	0.92	.	4.26	1.000	0.878	814	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.13;AMR_AF=0.01;AN=4;ASN_AF=0.17;CAnc=T;DP=65;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=4.26;HRun=0;HaplotypeScore=0.0000;MQ=37.69;MQ0=0;Map20=1;OAnc=T;QD=36.31;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=814;mSC=1.000;pSC=0.878	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1594,120,0:0,0:0,0:0,0:24,19:0:37.69:0;1/1:22:66.21:865,66,0:0,0:0,0:0,0:6,16:0:37.00:0	+
2_37402356_C/G	2	37402356	G	ENSG00000138068	ENST00000260637	Transcript	NON_SYNONYMOUS_CODING	450	429	143	S/R	agC/agG	-	ENSP=ENSP00000260637;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SULT6B1	C	G/G,C/C	G	G	G	A/A,H/H	rs45439591	0.98	.	3.01	1.000	0.332	579	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AMR_AF=0.01;AN=4;CAnc=G;DP=88;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=3.01;HRun=0;HaplotypeScore=0.0000;MQ=39.06;MQ0=0;Map20=1;OAnc=G;QD=38.40;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=579;mSC=1.000;pSC=0.332	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2222,172,0:0,0:0,0:32,23:0,0:0:39.06:0;0/0:31:93.31:0,93,1236:0,0:15,16:0,0:0,0:0:37.00:0	-
2_37414548_T/C	2	37414548	C	ENSG00000138068	ENST00000260637	Transcript	NON_SYNONYMOUS_CODING	169	148	50	E/K	Gaa/Aaa	-	ENSP=ENSP00000260637;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SULT6B1	T	C/C,T/T	C	C	C	A/A,H/H	rs45493492	0.99	.	2.22	0.223	0.234	552	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.01;AN=4;BaseQRankSum=0.112;CAnc=C;DP=116;Dels=0.00;EUR_AF=0.04;FS=3.188;GAnc=C;GRP=2.22;HRun=0;HaplotypeScore=2.9573;MQ=38.52;MQ0=0;MQRankSum=-1.102;Map20=1;OAnc=C;QD=36.98;ReadPosRankSum=0.652;TS=HPGOMC;TSseq=T,C,T,C,C,C;UR;bSC=552;mSC=0.223;pSC=0.234	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:78:99:2917,189,0:0,1:40,36:0,0:0,1:0:38.52:0;0/0:38:99:0,114,1520:0,0:0,0:0,0:16,22:0:37.00:0	-
2_40657356_G/A	2	40657356	A	ENSG00000183023	ENST00000332839	Transcript	NON_SYNONYMOUS_CODING	65	65	22	I/T	aTt/aCt	-	ENSP=ENSP00000332931;PolyPhen=benign(0);SIFT=tolerated(0.79);HGNC=SLC8A1	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	3.37	0.005	0.191	790	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=93;Dels=0.00;FS=0.000;GAnc=A;GRP=3.37;HRun;HaplotypeScore=1.9829;MQ=38.16;MQ0=0;Map20=1;OAnc=A;QD=38.08;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=790;mSC=0.005;pSC=0.191	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1975,150,0:40,11:0,0:0,0:0,0:0:38.16:0;1/1:42:99:1641,126,0:18,24:0,0:0,0:0,0:0:36.76:0	-
2_67630476_T/C	2	67630476	C	ENSG00000143971	ENST00000272342	Transcript	NON_SYNONYMOUS_CODING	792	662	221	T/M	aCg/aTg	-	ENSP=ENSP00000272342;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ETAA1	T	C/C,C/C	C	C	C	A/A,A/A	rs13036061	0.92	CpG	-8.74	0.005	.	661	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.18;AMR_AF=0.06;AN=4;CAnc=C;CpG;DP=98;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=C;GRP=-8.74;HRun=0;HaplotypeScore=2.9660;MQ=39.32;MQ0=0;Map20=1;OAnc=C;QD=38.86;TS=HPGOMC;TSseq=T,C,C,C,T,T;UR;bSC=661;mSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2481,190,0:0,0:40,23:0,0:0,0:0:39.32:0;1/1:35:99:1378,105,0:0,0:19,16:0,0:0,0:0:37.00:0	+
2_69746142_C/G	2	69746142	G	ENSG00000115977	ENST00000406297	Transcript	NON_SYNONYMOUS_CODING	1818	1441	481	P/A	Cca/Gca	-	ENSP=ENSP00000385181;PolyPhen=unknown(0);SIFT=tolerated(0.44);HGNC=AAK1	C	G/G,G/G	G	G	G	A/A,A/A	rs76509206	0.96	RM	1.67	0.000	.	474	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.02;AN=4;CAnc=G;DP=55;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=1.67;HRun;HaplotypeScore=0.5784;MQ=39.20;MQ0=0;Map20=1;OAnc=G;QD=38.10;RM;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=474;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1557,120,0:0,0:0,0:19,21:0,0:0:39.20:0;1/1:15:45.14:587,45,0:0,0:0,0:9,6:0,0:0:37.00:0	-
2_71044076_T/C	2	71044076	C	ENSG00000152672	ENST00000272367	Transcript	NON_SYNONYMOUS_CODING	514	437	146	S/N	aGt/aAt	-	ENSP=ENSP00000272367;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CLEC4F	T	T/T,C/C	C	C	-	H/H,A/A	rs61754946	0.99	.	-2.79	.	.	856	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=C;DP=83;GAnc=C;GRP=-2.79;HRun=0;MQ=38.06;MQ0=0;Map20=1;TS=HPGM;TSseq=T,C,C,C;UR;bSC=856	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:56:99:0,169,2205:0,0:0,0:0,0:26,28:0:38.06:0;1/1:27:81.25:1037,81,0:0,0:12,15:0,0:0,0:0:37.00:0	-
2_73438011_T/A	2	73438011	A	ENSG00000214513	ENST00000398468	Transcript	NON_SYNONYMOUS_CODING	1119	710	237	N/I	aAc/aTc	-	ENSP=ENSP00000381486;PolyPhen=benign(0);SIFT=tolerated(0.35);HGNC=NOTO	T	A/A,A/A	A	A	A	A/A,A/A	.	1	.	2.06	0.001	.	530	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.933;CAnc=A;DP=67;Dels=0.00;FS=0.000;GAnc=A;GRP=2.06;HRun;HaplotypeScore=0.0000;MQ=37.69;MQ0=0;MQRankSum=1.644;Map20=1;OAnc=A;QD=32.22;ReadPosRankSum=-1.377;TS=HPGOMC;TSseq=T,A,A,A,A,G;UR;bSC=530;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:74.36:1418,74,0:21,21:0,0:0,0:1,0:0:37.69:0;1/1:24:72.21:911,72,0:11,13:0,0:0,0:0,0:0:37.00:0	+
2_74043126_A/C	2	74043126	C	ENSG00000187833	ENST00000342345	Transcript	NON_SYNONYMOUS_CODING	1752	1686	562	N/K	aaC/aaA	-	ENSP=ENSP00000340692;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C2orf78	A	C/C,C/C	C	C	C	A/A,A/A	rs61015788	0.97	.	2.39	.	.	559	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.02;AN=4;BaseQRankSum=-1.278;CAnc=C;DP=92;Dels=0.00;FS=2.643;GAnc=C;GRP=2.39;HRun=0;HaplotypeScore=0.5784;MQ=38.01;MQ0=0;MQRankSum=0.649;Map20=1;OAnc=C;QD=36.11;ReadPosRankSum=1.654;TS=HPGOM;TSseq=A,C,C,C,C;bSC=559	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:97.56:2163,98,0:2,0:37,20:0,0:0,0:0:38.01:0;1/1:33:99:1309,99,0:0,0:20,13:0,0:0,0:0:37.00:0	+
2_74688563_C/T	2	74688563	T	ENSG00000115275	ENST00000233616	Transcript	NON_SYNONYMOUS_CODING	2516	2353	785	S/G	Agt/Ggt	-	ENSP=ENSP00000233616;PolyPhen=benign(0.004);SIFT=tolerated(0.83);HGNC=MOGS	C	T/T,T/T	T	T	T	A/A,A/A	rs35533773	0.98	CpG	-0.999	0.921	.	98	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.01;AN=4;BaseQRankSum=1.516;CAnc=T;CpG;DP=76;Dels=0.00;FS=3.499;GAnc=T;GRP=-0.999;HRun=0;HaplotypeScore=1.9981;MQ=37.35;MQ0=0;MQRankSum=1.227;Map20=1;OAnc=T;QD=35.58;ReadPosRankSum=-1.516;TS=HPGOMC;TSseq=C,T,T,T,T,C;bSC=98;mSC=0.921	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1776,108,0:0,0:1,0:0,0:22,26:0:37.35:0;1/1:27:81.26:1068,81,0:0,0:0,0:0,0:13,14:0:37.00:0	-
2_74689671_G/C	2	74689671	C	ENSG00000115275	ENST00000233616	Transcript	NON_SYNONYMOUS_CODING	1408	1245	415	M/I	atG/atC	-	ENSP=ENSP00000233616;PolyPhen=benign(0);SIFT=tolerated(0.3);HGNC=MOGS	G	C/C,C/C	C	C	C	A/A,A/A	rs34838944	0.99	CpG	1.72	0.906	.	99	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;BaseQRankSum=1.288;CAnc=C;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=C;GRP=1.72;HRun=4;HaplotypeScore=0.0000;MQ=36.74;MQ0=0;MQRankSum=0.844;Map20=1;OAnc=C;QD=36.09;ReadPosRankSum=0.578;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=99;mSC=0.906	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:84.87:1441,85,0:0,0:19,19:1,0:0,0:0:36.74:0;1/1:15:45.15:593,45,0:0,0:7,8:0,0:0,0:0:37.00:0	-
2_74699584_T/C	2	74699584	C	ENSG00000204822	ENST00000258105	Transcript	NON_SYNONYMOUS_CODING	768	106	36	A/T	Gcg/Acg	-	ENSP=ENSP00000258105;PolyPhen=benign(0);SIFT=tolerated(0.53);HGNC=MRPL53	T	C/C,C/C	C	C	C	A/A,A/A	rs148007344	0.99	.	3.78	.	.	104	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AN=4;BaseQRankSum=1.636;CAnc=C;DP=55;Dels=0.00;FS=0.000;GAnc=C;GRP=3.78;HRun;HaplotypeScore=0.9997;MQ=38.60;MQ0=0;MQRankSum=-1.636;Map20=1;OAnc=C;QD=36.28;ReadPosRankSum=-1.540;TS=HPGOMC;TSseq=T,C,C,C,C,-;bSC=104	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:78.73:1375,79,0:0,0:15,20:0,0:1,1:0:38.60:0;1/1:18:54.17:693,54,0:0,0:7,11:0,0:0,0:0:37.00:0	-
2_74719816_G/A	2	74719816	A	ENSG00000115282	ENST00000233623	Transcript	NON_SYNONYMOUS_CODING	1212	1205	402	D/G	gAt/gGt	-	ENSP=ENSP00000233623;PolyPhen=benign(0.002);SIFT=tolerated(0.63);HGNC=TTC31	G	A/A,A/A	A	A	A	A/A,A/A	rs111415294	0.99	.	0.8	0.087	.	118	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=A;DP=68;Dels=0.00;FS=0.000;GAnc=A;GRP=0.8;HRun=0;HaplotypeScore=0.9997;MQ=40.87;MQ0=0;Map20=1;OAnc=A;QD=37.17;TS=HPGOMC;TSseq=G,A,A,A,G,G;bSC=118;mSC=0.087	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1408,111,0:23,14:0,0:0,0:0,0:0:40.87:0;1/1:31:93.29:1213,93,0:16,15:0,0:0,0:0,0:0:37.00:0	+
2_84756049_G/A	2	84756049	A	ENSG00000115423	ENST00000237449	Transcript	NON_SYNONYMOUS_CODING	429	421	141	V/M	Gtg/Atg	-	ENSP=ENSP00000237449;PolyPhen=benign(0.001);SIFT=tolerated(0.21);HGNC=DNAH6	A	G/G,G/G	G	G	G	A/A,A/A	rs4832089	0.95	.	-5.79	0.000	.	590	1	1000gALT=A;AC=0;AF=0.00;AF1000g=0.95;AFR_AF=0.89;AMR_AF=0.96;AN=4;ASN_AF=1.00;CAnc=G;DP=72;EUR_AF=0.96;GAnc=G;GRP=-5.79;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=G,G,G,G,G,-;bSC=590;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:31.35:0,31,1297:0,2:0,0:16,20:0,0:0:37.00:0;0/0:34:99:0,102,1327:0,0:0,0:15,19:0,0:0:37.33:0	+
2_85777118_G/A	2	85777118	A	ENSG00000115486	ENST00000233838	Transcript	NON_SYNONYMOUS_CODING	2297	2216	739	M/T	aTg/aCg	-	ENSP=ENSP00000233838;PolyPhen=benign(0.194);SIFT=tolerated(0.29);HGNC=GGCX	G	G/G,A/A	A	A	A	H/H,A/A	.	1	CpG	-2.24	0.000	.	313	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=87;GAnc=A;GRP=-2.24;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=313;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,117,1991:0,1:0,0:25,25:0,0:0:37.00:0;1/1:35:99:1386,105,0:12,23:0,0:0,0:0,0:0:37.00:0	-
2_88485166_G/A	2	88485166	A	ENSG00000144115	ENST00000343544	Transcript	NON_SYNONYMOUS_CODING	1245	1174	392	M/V	Atg/Gtg	-	ENSP=ENSP00000339563;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=THNSL2	G	A/A,G/G	A	A	A	A/A,H/H	rs76505901	0.98	CpG	-3.39	0.000	.	781	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AN=4;ASN_AF=0.06;CAnc=A;CpG;DP=67;Dels=0.00;FS=0.000;GAnc=A;GRP=-3.39;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=37.85;TS=HPGOMC;TSseq=G,A,A,A,G,-;UR;bSC=781;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1509,114,0:20,18:0,0:0,0:0,0:0:37.00:0;0/0:28:84.26:0,84,1089:0,0:0,0:14,14:0,0:0:37.00:0	+
2_100210652_A/G	2	100210652	G	ENSG00000144218	ENST00000317233	Transcript	NON_SYNONYMOUS_CODING	1707	1471	491	P/S	Cca/Tca	-	ENSP=ENSP00000317421;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=AFF3	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	4.99	0.980	.	620	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=78;GAnc=G;GRP=4.99;HRun;MQ=38.01;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=620;mSC=0.980	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:55:99:0,163,2133:26,29:0,0:0,0:0,0:0:38.01:0;1/1:23:66.21:870,66,0:0,0:0,0:13,10:0,0:0:37.00:0	-
2_101012068_A/G	2	101012068	G	ENSG00000115526	ENST00000264249	Transcript	NON_SYNONYMOUS_CODING	822	436	146	P/S	Cct/Tct	-	ENSP=ENSP00000264249;PolyPhen=benign(0);SIFT=tolerated(0.32);HGNC=CHST10	A	A/A,G/G	G	G	G	H/H,A/A	rs57227647	0.98	.	3.61	0.918	.	724	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AN=4;CAnc=G;DP=89;GAnc=G;GRP=3.61;HRun;MQ=37.58;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=724;mSC=0.918	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,156,2040:31,20:0,0:0,0:0,0:0:37.58:0;1/1:37:99:1462,111,0:0,0:0,0:14,23:0,0:0:37.00:0	-
2_102625043_G/C	2	102625043	C	ENSG00000115590	ENST00000332549	Transcript	NON_SYNONYMOUS_CODING	235	6	2	F/L	ttC/ttG	-	ENSP=ENSP00000330959;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=IL1R2	G	G/G,C/C	C	C	C	H/H,A/A	.	1	.	0.732	0.007	.	707	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=71;GAnc=C;GRP=0.732;HRun;MQ=38.44;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,T,C;UR;bSC=707;mSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,117,1538:0,0:0,0:20,21:0,0:0:38.44:0;1/1:30:90.29:1173,90,0:0,0:15,15:0,0:0,0:0:37.00:0	+
2_107429680_C/T	2	107429680	T	ENSG00000144057	ENST00000409087	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	1509	1319	440	D/G	gAc/gGc	-	ENSP=ENSP00000387332;PolyPhen=probably_damaging(1);SIFT=deleterious(0);HGNC=ST6GAL2	C	C/C,T/T	T	T	T	H/H,A/A	rs140361370	1.0	.	3.77	0.021	.	843	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.02;AN=4;CAnc=T;DP=84;GAnc=T;GRP=3.77;HRun=0;MQ=38.55;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=843;mSC=0.021	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:99:0,172,2214:0,0:27,26:0,0:0,0:0:38.55:0;1/1:27:81.25:1046,81,0:0,0:0,0:0,0:11,16:0:37.42:0	-
2_112945041_C/T	2	112945041	T	ENSG00000144152	ENST00000409903	Transcript	NON_SYNONYMOUS_CODING	1255	1025	342	M/T	aTg/aCg	-	ENSP=ENSP00000386295;PolyPhen=unknown(0);HGNC=FBLN7	C	C/C,T/T	T	T	T	H/H,A/A	rs140094535	1.0	CpG	-7.97	0.915	.	531	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=T;CpG;DP=80;GAnc=T;GRP=-7.97;HRun=0;MQ=37.59;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,C,C;UR;bSC=531;mSC=0.915	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,147,1924:0,0:24,25:0,0:2,0:0:37.59:0;1/1:29:87.28:1146,87,0:0,0:0,0:0,0:12,17:0:37.00:0	+
2_120734635_A/T	2	120734635	T	ENSG00000088179	ENST00000263708	Transcript	NON_SYNONYMOUS_CODING	3541	2770	924	S/T	Tca/Aca	-	ENSP=ENSP00000263708;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PTPN4	A	T/T,T/T	T	T	T	A/A,A/A	rs3189128	0.96	.	2.73	0.996	0.909	440	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.10;AMR_AF=0.02;AN=4;CAnc=T;DP=96;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=2.73;HRun=0;HaplotypeScore=0.0000;MQ=40.12;MQ0=0;Map20=1;OAnc=T;QD=35.97;TS=HPGOMC;TSseq=A,T,T,T,T,T;UR;bSC=440;mSC=0.996;pSC=0.909	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2371,184,0:0,0:0,0:0,0:40,24:0:40.12:0;1/1:31:53.28:1133,53,0:1,0:0,0:0,0:20,10:0:37.00:0	+
2_128381717_G/A	2	128381717	A	ENSG00000169994	ENST00000272666	Transcript	NON_SYNONYMOUS_CODING	3844	350	117	Q/R	cAg/cGg	-	ENSP=ENSP00000272666;PolyPhen=benign(0.044);SIFT=tolerated(1);HGNC=MYO7B	G	A/A,A/A	A	A	A	A/A,A/A	rs2245408	0.99	CpG	3.76	1.000	.	483	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=A;CpG;DP=58;Dels=0.00;FS=0.000;GAnc=A;GRP=3.76;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=36.95;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=483;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1400,105,0:15,22:0,0:0,0:0,0:0:37.00:0;1/1:21:63.19:818,63,0:12,9:0,0:0,0:0,0:0:37.00:0	+
2_128381861_G/A	2	128381861	A	ENSG00000169994	ENST00000272666	Transcript	NON_SYNONYMOUS_CODING	3988	494	165	Q/R	cAa/cGa	-	ENSP=ENSP00000272666;PolyPhen=possibly_damaging(0.504);SIFT=deleterious(0.04);HGNC=MYO7B	G	A/A,G/G	A	A	A	A/A,H/H	rs61743523	0.99	CpG	-0.0642	0.001	.	483	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=A;CpG;DP=70;Dels=0.02;FS=0.000;GAnc=A;GRP=-0.0642;HRun;HaplotypeScore=0.9665;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=36.75;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=483;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1393,105,0:12,24:0,0:0,0:0,0:0:37.00:0;0/0:33:99:0,99,1264:0,0:0,0:21,12:0,0:0:37.00:0	+
2_128385933_T/C	2	128385933	C	ENSG00000169994	ENST00000272666	Transcript	NON_SYNONYMOUS_CODING	5148	1654	552	P/S	Ccc/Tcc	-	ENSP=ENSP00000272666;PolyPhen=possibly_damaging(0.555);SIFT=tolerated(0.27);HGNC=MYO7B	T	C/C,T/T	C	C	C	A/A,H/H	rs111388703	1.0	.	-7.83	0.000	.	479	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;DP=58;Dels=0.00;FS=0.000;GAnc=C;GRP=-7.83;HRun=2;HaplotypeScore=0.0000;MQ=38.27;MQ0=0;Map20=1;OAnc=C;QD=37.97;TS=HPGOMC;TSseq=T,C,C,N,C,C;bSC=479;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1514,117,0:0,0:24,14:0,0:0,0:0:38.27:0;0/0:19:57.18:0,57,734:0,0:0,0:0,0:13,6:0:37.00:0	+
2_128388812_G/A	2	128388812	A	ENSG00000169994	ENST00000272666	Transcript	NON_SYNONYMOUS_CODING	5670	2176	726	M/V	Atg/Gtg	-	ENSP=ENSP00000272666;PolyPhen=possibly_damaging(0.781);SIFT=tolerated(0.57);HGNC=MYO7B	G	A/A,G/G	A	A	A	A/A,H/H	rs112924521	1.0	CpG	-11.5	0.000	.	476	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=A;CpG;DP=55;Dels=0.00;FS=0.000;GAnc=A;GRP=-11.5;HRun=0;HaplotypeScore=1.9995;MQ=37.71;MQ0=0;Map20=1;OAnc=A;QD=38.37;TS=HPGOMC;TSseq=G,A,A,N,G,-;bSC=476;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1644,123,0:23,19:0,0:0,0:0,0:0:37.71:0;0/0:13:39.13:0,39,520:0,0:0,0:3,10:0,0:0:37.00:0	+
2_128396876_T/C	2	128396876	C	ENSG00000072163	ENST00000324938	Transcript	NON_SYNONYMOUS_CODING	1236	1078	360	A/T	Gca/Aca	-	ENSP=ENSP00000326888;PolyPhen=benign(0);SIFT=tolerated(0.51);HGNC=LIMS2	T	C/C,T/T	C	C	C	A/A,H/H	.	1	CpG	3.09	0.274	.	496	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=62;Dels=0.00;FS=0.000;GAnc=C;GRP=3.09;HRun=0;HaplotypeScore=0.0000;MQ=38.88;MQ0=0;Map20=1;OAnc=C;QD=38.15;TS=HPGOMC;TSseq=T,C,C,C,C,A;bSC=496;mSC=0.274	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1826,141,0:0,0:24,23:0,0:0,0:0:38.88:0;0/0:15:45.15:0,45,600:0,0:0,0:0,0:10,5:0:37.00:0	-
2_131520945_C/G	2	131520945	G	ENSG00000178171	ENST00000321420	Transcript	NON_SYNONYMOUS_CODING	1559	1300	434	V/L	Gtt/Ctt	-	ENSP=ENSP00000314914;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAM123C	C	G/G,G/G	G	G	G	A/A,A/A	rs72854996	0.95	.	1.93	0.007	.	855	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.18;AMR_AF=0.03;AN=4;BaseQRankSum=-1.300;CAnc=G;DP=47;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=1.93;HRun=0;HaplotypeScore=0.9997;MQ=38.84;MQ0=0;MQRankSum=0.758;Map20=1;OAnc=G;QD=35.82;ReadPosRankSum=-1.300;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=855;mSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:56.31:1179,56,0:0,0:0,1:11,19:0,0:0:38.84:0;1/1:15:45.12:571,45,0:0,0:0,0:6,9:0,0:0:37.00:0	+
2_167262353_C/G	2	167262353	G	ENSG00000136546	ENST00000259060	Transcript	NON_SYNONYMOUS_CODING	4913	4786	1596	L/V	Ctt/Gtt	-	ENSP=ENSP00000259060;PolyPhen=benign(0);SIFT=tolerated(0.27);HGNC=SCN7A	C	G/G,C/C	G	G	G	A/A,H/H	rs3791251	0.93	.	1.57	0.001	0.898	532	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.02;AMR_AF=0.03;AN=4;ASN_AF=0.14;CAnc=G;DP=94;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=1.57;HRun=0;HaplotypeScore=0.9997;MQ=37.52;MQ0=0;Map20=1;OAnc=G;QD=38.51;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=532;mSC=0.001;pSC=0.898	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2267,172,0:0,1:0,0:28,28:0,0:0:37.52:0;0/0:36:99:0,105,1385:0,0:21,15:0,0:0,0:0:37.00:0	-
2_168115701_C/A	2	168115701	A	ENSG00000163092	ENST00000409043	Transcript	NON_SYNONYMOUS_CODING	2734	2645	882	H/P	cAt/cCt	-	ENSP=ENSP00000386454;PolyPhen=benign(0);SIFT=tolerated(0.64);HGNC=XIRP2	C	C/C,A/A	A	A	A	H/H,A/A	.	1	.	3.42	0.017	0.660	357	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=91;GAnc=A;GRP=3.42;HRun=0;MQ=38.06;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=C,A,A,A,A,A;UR;bSC=357;mSC=0.017;pSC=0.660	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:56:99:0,166,2168:0,0:33,23:0,0:0,0:0:38.06:0;1/1:35:99:1368,105,0:17,18:0,0:0,0:0,0:0:37.00:0	+
2_170632969_C/A	2	170632969	A	ENSG00000213160	ENST00000448589	Transcript	NON_SYNONYMOUS_CODING	64	65	22	N/T	aAc/aCc	-	ENSP=ENSP00000400833;PolyPhen=unknown(0);HGNC=KLHL23	C	C/C,A/A	A	-	A	H/H,A/A	.	1	.	0.433	0.001	0.537	627	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=70;Dels=0.02;GRP=0.433;HRun=8;MQ=39.05;MQ0=0;Map20=1;OAnc=A;TS=HPOMC;TSseq=C,A,A,A,A;bSC=627;mSC=0.001;pSC=0.537	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,129,1667:0,0:24,19:0,0:0,0:0:39.05:0;1/1:26:78.25:1020,78,0:13,13:0,0:0,0:0,0:0:36.58:0	+
2_179634936_C/T	2	179634936	T	ENSG00000155657	ENST00000342175	Transcript	NON_SYNONYMOUS_CODING	8579	8354	2785	N/S	aAt/aGt	-	ENSP=ENSP00000340554;PolyPhen=unknown(0);HGNC=TTN	C	T/T,T/T	T	T	T	A/A,A/A	rs2306636	0.91	.	6.06	1.000	0.975	4	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AMR_AF=0.11;AN=4;ASN_AF=0.21;BaseQRankSum=-0.289;CAnc=T;DP=102;Dels=0.00;EUR_AF=0.05;FS=3.632;GAnc=T;GRP=6.06;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-0.058;Map20=1;OAnc=T;QD=36.49;ReadPosRankSum=1.559;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=4;mSC=1.000;pSC=0.975	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2296,141,0:0,0:1,0:0,0:27,34:0:37.00:0;1/1:40:99:1590,120,0:0,0:0,0:0,0:20,20:0:37.00:0	-
2_182780307_G/A	2	182780307	A	ENSG00000138434	ENST00000320370	Transcript	NON_SYNONYMOUS_CODING	2052	1940	647	D/G	gAt/gGt	-	ENSP=ENSP00000314669;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SSFA2	G	A/A,A/A	A	A	A	A/A,A/A	rs75716247	0.93	.	5.56	0.996	0.919	403	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.12;AMR_AF=0.04;AN=4;ASN_AF=0.11;CAnc=A;DP=94;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=5.56;HRun=0;HaplotypeScore=0.9997;MQ=40.21;MQ0=0;Map20=1;OAnc=A;QD=39.00;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=403;mSC=0.996;pSC=0.919	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2490,190,0:37,26:0,0:0,0:0,0:0:40.21:0;1/1:31:93.30:1215,93,0:13,18:0,0:0,0:0,0:0:37.00:0	+
2_182792984_T/A	2	182792984	A	ENSG00000138434	ENST00000409001	Transcript	NON_SYNONYMOUS_CODING	3788	3706	1236	N/Y	Aat/Tat	-	ENSP=ENSP00000387319;PolyPhen=benign(0.007);SIFT=tolerated(0.38);HGNC=SSFA2	T	A/A,A/A	A	A	A	A/A,A/A	rs2303554	0.93	.	4.78	0.484	0.486	413	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.11;AMR_AF=0.04;AN=4;ASN_AF=0.11;BaseQRankSum=1.267;CAnc=A;DP=100;Dels=0.00;EUR_AF=0.03;FS=3.490;GAnc=A;GRP=4.78;HRun;HaplotypeScore=1.9955;MQ=38.31;MQ0=0;MQRankSum=0.491;Map20=1;OAnc=A;QD=37.12;ReadPosRankSum=0.543;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=413;mSC=0.484;pSC=0.486	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2557,162,0:37,30:0,0:0,0:0,1:0:38.31:0;1/1:32:67.66:1180,68,0:16,15:0,0:0,0:0,1:1:37.00:0	+
2_186603660_A/T	2	186603660	T	ENSG00000188738	ENST00000326147	Transcript	NON_SYNONYMOUS_CODING	39	39	13	N/K	aaT/aaA	-	ENSP=ENSP00000321903;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FSIP2	A	A/A,T/T	T	T	T	H/H,A/A	.	1	.	-8.62	0.000	0.207	250	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=47;GAnc=T;GRP=-8.62;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOM;TSseq=A,T,T,T,T;UR;bSC=250;mSC=0.000;pSC=0.207	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:35:99:0,99,1296:15,20:0,0:0,0:0,0:0:37.00:0;1/1:12:36.11:468,36,0:0,0:0,0:0,0:9,3:0:37.93:0	+
2_198593260_A/C	2	198593260	C	ENSG00000152430	ENST00000430004	Transcript	STOP_LOST	1330	933	311	*/Y	taG/taT	-	ENSP=ENSP00000397711;HGNC=BOLL	A	A/A,C/C	C	C	C	H/H,A/A	rs74375706	0.99	.	4.76	1.000	0.975	183	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;CAnc=C;DP=82;GAnc=C;GRP=4.76;HRun=0;MQ=38.77;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=183;mSC=1.000;pSC=0.975	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:50:99:0,144,1906:32,17:0,0:0,0:0,0:0:38.77:0;1/1:32:96.31:1272,96,0:0,0:17,15:0,0:0,0:0:37.00:0	-
2_202501551_T/C	2	202501551	C	ENSG00000155755	ENST00000409444	Transcript	NON_SYNONYMOUS_CODING	488	170	57	S/N	aGt/aAt	-	ENSP=ENSP00000387203;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=TMEM237	T	C/C,T/T	C	C	C	A/A,H/H	rs141817764	1.0	.	3.44	0.703	0.823	465	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;DP=69;Dels=0.00;FS=0.000;GAnc=C;GRP=3.44;HRun=0;HaplotypeScore=0.0000;MQ=37.75;MQ0=0;Map20=1;OAnc=C;QD=38.61;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=465;mSC=0.703;pSC=0.823	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1577,120,0:0,0:19,21:0,0:0,0:0:37.75:0;0/0:29:87.28:0,87,1141:0,0:0,0:0,0:11,18:0:37.00:0	-
2_203846817_A/T	2	203846817	T	ENSG00000138380	ENST00000320443	Transcript	NON_SYNONYMOUS_CODING	2755	1712	571	F/Y	tTc/tAc	-	ENSP=ENSP00000316224;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ALS2CR8	A	T/T,T/T	T	T	T	A/A,A/A	rs72932557	0.93	.	4.26	0.822	0.765	158	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.02;AMR_AF=0.09;AN=4;ASN_AF=0.02;CAnc=T;DP=82;Dels=0.00;EUR_AF=0.14;FS=0.000;GAnc=T;GRP=4.26;HRun;HaplotypeScore=3.9720;MQ=38.64;MQ0=0;Map20=1;OAnc=T;QD=38.80;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=158;mSC=0.822;pSC=0.765	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2128,163,0:0,0:0,0:0,0:24,30:0:38.64:0;1/1:28:81.27:1080,81,0:0,0:0,0:0,0:16,12:0:37.00:0	+
2_209190519_A/T	2	209190519	T	ENSG00000115020	ENST00000264380	Transcript	NON_SYNONYMOUS_CODING	3142	2984	995	Q/L	cAg/cTg	-	ENSP=ENSP00000264380;PolyPhen=benign(0);SIFT=deleterious(0.03);HGNC=PIKFYVE	T	A/A,T/T	A	A	A	A/A,H/H	rs893254	0.91	.	4.24	0.442	0.602	351	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.91;AFR_AF=0.78;AMR_AF=0.94;AN=4;ASN_AF=0.92;CAnc=A;DP=88;EUR_AF=0.98;GAnc=A;GRP=4.24;HRun=0;MQ=38.55;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=351;mSC=0.442;pSC=0.602	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:43.79:0,44,1941:28,26:0,0:0,0:0,3:0:38.55:0;1/1:31:93.30:1223,93,0:0,0:0,0:0,0:16,15:0:37.00:0	+
2_219029843_A/C	2	219029843	C	ENSG00000163464	ENST00000295683	Transcript	NON_SYNONYMOUS_CODING	213	92	31	R/M	aGg/aTg	-	ENSP=ENSP00000295683;PolyPhen=benign(0);SIFT=tolerated(0.91);HGNC=CXCR1	A	C/C,C/C	C	C	C	A/A,A/A	rs16858811	0.96	.	-10.7	0.000	0.004	595	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.06;AMR_AF=0.04;AN=4;ASN_AF=0.01;BaseQRankSum=1.283;CAnc=C;DP=75;Dels=0.00;EUR_AF=0.04;FS=3.625;GAnc=C;GRP=-10.7;HRun;HaplotypeScore=3.9367;MQ=37.92;MQ0=0;MQRankSum=-0.192;Map20=1;OAnc=C;QD=35.64;ReadPosRankSum=-0.962;TS=HPGOMC;TSseq=A,C,C,C,C,A;bSC=595;mSC=0.000;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:1958,123,0:1,0:22,29:0,0:0,0:0:37.92:0;1/1:21:63.20:827,63,0:0,0:8,13:0,0:0,0:0:37.00:0	-
2_219557014_A/C	2	219557014	C	ENSG00000163482	ENST00000295709	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2192	1913	638	P/Q	cCa/cAa	-	ENSP=ENSP00000295709;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=STK36	A	C/C,C/C	C	C	C	A/A,A/A	rs6709303	0.96	.	3.96	1.000	0.714	114	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.17;AMR_AF=0.01;AN=4;CAnc=C;DP=67;Dels=0.00;FS=0.000;GAnc=C;GRP=3.96;HRun=4;HaplotypeScore=0.9987;MQ=38.52;MQ0=0;Map20=1;OAnc=C;QD=37.71;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=114;mSC=1.000;pSC=0.714	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1504,114,0:0,0:21,15:0,0:1,0:0:38.52:0;1/1:28:84.28:1120,84,0:0,0:9,19:0,0:0,0:0:37.00:0	+
2_219888915_T/A	2	219888915	A	ENSG00000181378	ENST00000341552	Transcript	NON_SYNONYMOUS_CODING	2501	2417	806	M/K	aTg/aAg	-	ENSP=ENSP00000340776;PolyPhen=benign(0);SIFT=tolerated(0.18);HGNC=CCDC108	T	A/A,A/A	A	A	A	A/A,A/A	rs9653262	0.94	.	3.45	0.860	0.886	437	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.24;AMR_AF=0.02;AN=4;BaseQRankSum=0.347;CAnc=A;DP=54;Dels=0.00;FS=0.000;GAnc=A;GRP=3.45;HRun=0;HaplotypeScore=0.0000;MQ=37.75;MQ0=0;MQRankSum=0.087;Map20=1;OAnc=A;QD=37.30;ReadPosRankSum=-1.299;TS=HPGOMC;TSseq=T,A,A,A,A,A;UR;bSC=437;mSC=0.860;pSC=0.886	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:80.39:1525,80,0:19,20:0,0:0,0:0,1:0:37.75:0;1/1:14:42.13:540,42,0:10,4:0,0:0,0:0,0:0:36.27:0	-
2_219942804_G/T	2	219942804	T	ENSG00000187736	ENST00000426304	Transcript	NON_SYNONYMOUS_CODING	473	473	158	H/P	cAc/cCc	-	ENSP=ENSP00000394896;PolyPhen=benign(0);SIFT=tolerated(0.17);HGNC=NHEJ1	G	T/T,T/T	T	T	T	A/A,A/A	rs6720495	0.99	.	0.767	0.010	0.880	358	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=T;DP=59;Dels=0.00;FS=0.000;GAnc=T;GRP=0.767;HRun=0;HaplotypeScore=0.0000;MQ=40.70;MQ0=0;Map20=1;OAnc=T;QD=37.16;TS=HPGOMC;TSseq=G,T,T,T,T,T;UR;bSC=358;mSC=0.010;pSC=0.880	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.28:1185,93,0:0,0:0,0:0,0:11,18:0:40.70:0;1/1:28:84.26:1077,84,0:0,0:0,0:0,0:15,13:0:37.00:0	-
2_219942814_C/T	2	219942814	T	ENSG00000187736	ENST00000356853	Transcript	NON_SYNONYMOUS_CODING	837	703	235	T/A	Act/Gct	-	ENSP=ENSP00000349313;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=NHEJ1	C	T/T,C/C	T	T	T	A/A,H/H	.	1	CpG	-4.05	0.004	0.790	358	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=56;Dels=0.00;FS=0.000;GAnc=T;GRP=-4.05;HRun=0;HaplotypeScore=0.9973;MQ=40.59;MQ0=0;Map20=1;OAnc=T;QD=37.41;TS=HPGOMC;TSseq=C,T,T,T,T,C;UR;bSC=358;mSC=0.004;pSC=0.790	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.29:1230,96,0:0,0:0,0:0,0:10,20:0:40.59:0;0/0:24:72.23:0,72,946:0,0:12,12:0,0:0,0:0:37.00:0	-
2_220379544_T/C	2	220379544	C	ENSG00000072182	ENST00000347842	Transcript	NON_SYNONYMOUS_CODING	493	479	160	A/V	gCt/gTt	-	ENSP=ENSP00000326627;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ASIC4	T	C/C,T/T	C	C	C	A/A,H/H	rs116598338	1.0	.	4.26	0.000	0.019	594	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=38;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=4.26;HRun=0;HaplotypeScore=1.9995;MQ=38.24;MQ0=0;Map20=1;OAnc=C;QD=37.86;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=594;mSC=0.000;pSC=0.019	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:24:72.23:942,72,0:0,0:18,6:0,0:0,0:0:38.24:0;0/0:14:42.14:0,42,555:0,0:0,0:0,0:4,10:0:37.00:0	+
2_227729737_G/A	2	227729737	A	ENSG00000144468	ENST00000341329	Transcript	NON_SYNONYMOUS_CODING	570	328	110	T/A	Aca/Gca	-	ENSP=ENSP00000344779;PolyPhen=benign(0);SIFT=tolerated(0.49);HGNC=RHBDD1	G	A/A,A/A	A	A	A	A/A,A/A	rs35731955	0.96	CpG	1.99	0.582	0.448	542	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.19;AMR_AF=0.01;AN=4;CAnc=A;CpG;DP=89;Dels=0.00;FS=0.000;GAnc=A;GRP=1.99;HRun=0;HaplotypeScore=0.9997;MQ=40.04;MQ0=0;Map20=1;OAnc=A;QD=35.61;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=542;mSC=0.582;pSC=0.448	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:1956,150,0:22,32:0,0:0,0:0,0:0:40.04:0;1/1:35:99:1374,105,0:16,19:0,0:0,0:0,0:0:37.00:0	+
2_231974031_C/T	2	231974031	T	ENSG00000135914	ENST00000258400	Transcript	NON_SYNONYMOUS_CODING	1159	646	216	N/D	Aat/Gat	-	ENSP=ENSP00000258400;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=HTR2B	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	0.958	0.995	0.953	509	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=88;GAnc=T;GRP=0.958;HRun;MQ=37.58;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=509;mSC=0.995;pSC=0.953	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,116,1981:0,0:27,24:0,0:1,0:0:37.58:0;1/1:36:99:1418,108,0:0,0:0,0:0,0:18,18:0:37.00:0	-
2_232263298_G/A	2	232263298	A	ENSG00000156966	ENST00000287590	Transcript	NON_SYNONYMOUS_CODING	1129	868	290	S/G	Agc/Ggc	-	ENSP=ENSP00000287590;PolyPhen=benign(0.004);SIFT=tolerated(0.59);HGNC=B3GNT7	G	A/A,G/G	A	A	A	A/A,H/H	.	1	CpG	-2.02	.	0.966	783	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=46;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.02;HRun=0;HaplotypeScore=0.9997;MQ=38.06;MQ0=0;Map20=1;OAnc=A;QD=38.44;TS=HPGOC;TSseq=G,A,A,A,A;UR;bSC=783;pSC=0.966	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:84.27:1109,84,0:14,13:0,0:0,0:0,0:0:38.06:0;0/0:18:54.17:0,54,704:0,0:0,0:9,9:0,0:0:37.00:0	+
2_233877865_A/C	2	233877865	C	ENSG00000222001	ENST00000409905	Transcript	NON_SYNONYMOUS_CODING	372	134	45	A/D	gCt/gAt	-	ENSP=ENSP00000386846;PolyPhen=benign(0)	A	A/A,C/C	C	C	C	H/H,A/A	rs111339824	0.98	.	-3.33	0.000	0.044	900	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=C;DP=51;GAnc=C;GRP=-3.33;HRun=0;MQ=37.90;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=900;mSC=0.000;pSC=0.044	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:96.30:0,96,1245:9,24:0,0:0,0:0,0:0:37.90:0;1/1:18:54.17:702,54,0:0,0:8,10:0,0:0,0:0:37.00:0	+
2_234394568_C/T	2	234394568	T	ENSG00000085982	ENST00000251722	Transcript	NON_SYNONYMOUS_CODING	3368	3250	1084	T/A	Acc/Gcc	-	ENSP=ENSP00000251722;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=USP40	C	C/C,T/T	T	T	T	H/H,A/A	rs61736676	0.97	.	-0.771	0.000	0.066	577	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.01;AN=4;CAnc=T;DP=50;GAnc=T;GRP=-0.771;HRun=0;MQ=39.11;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,C,T;UR;bSC=577;mSC=0.000;pSC=0.066	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,111,1430:0,0:20,17:0,0:0,0:0:39.11:0;1/1:13:39.12:508,39,0:0,0:0,0:0,0:7,6:0:37.00:0	-
2_238244781_T/C	2	238244781	C	ENSG00000163359	ENST00000295550	Transcript	NON_SYNONYMOUS_CODING	9415	8962	2988	V/M	Gtg/Atg	-	ENSP=ENSP00000295550;PolyPhen=unknown(0);HGNC=COL6A3	T	C/C,T/T	C	C	C	A/A,H/H	rs11690358	0.95	CpG	-4.78	0.000	0.852	862	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.01;AMR_AF=0.04;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=62;Dels=0.00;EUR_AF=0.11;FS=0.000;GAnc=C;GRP=-4.78;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.10;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=862;mSC=0.000;pSC=0.852	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1519,114,0:0,0:22,17:0,0:0,0:0:37.00:0;0/0:23:69.22:0,69,911:0,0:0,0:0,0:14,9:0:37.00:0	-
2_238283472_T/G	2	238283472	G	ENSG00000163359	ENST00000295550	Transcript	NON_SYNONYMOUS_CODING	3715	3262	1088	Q/K	Cag/Aag	-	ENSP=ENSP00000295550;PolyPhen=unknown(0);HGNC=COL6A3	T	G/G,G/G	G	G	G	A/A,A/A	rs11896521	0.95	.	4.44	0.997	0.742	749	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.13;AMR_AF=0.07;AN=4;ASN_AF=0.04;CAnc=G;DP=58;Dels=0.00;FS=0.000;GAnc=G;GRP=4.44;HRun;HaplotypeScore=0.0000;MQ=37.85;MQ0=0;Map20=1;OAnc=G;QD=38.98;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=749;mSC=0.997;pSC=0.742	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1397,105,0:0,0:0,0:11,24:0,0:0:37.85:0;1/1:23:66.21:869,66,0:0,0:1,0:6,16:0,0:0:37.00:0	-
2_238419321_A/G	2	238419321	G	ENSG00000115648	ENST00000264605	Transcript	NON_SYNONYMOUS_CODING	509	215	72	R/Q	cGg/cAg	-	ENSP=ENSP00000264605;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MLPH	A	G/G,G/G	G	G	G	A/A,A/A	rs80292002	0.99	CpG	1.11	0.273	0.921	958	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.03;CAnc=G;CpG;DP=61;Dels=0.00;FS=0.000;GAnc=G;GRP=1.11;HRun;HaplotypeScore=0.0000;MQ=39.65;MQ0=0;Map20=1;OAnc=G;QD=38.88;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=958;mSC=0.273;pSC=0.921	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1744,132,0:0,0:0,0:21,23:0,0:0:39.65:0;1/1:17:48.15:630,48,0:0,0:0,0:8,8:1,0:0:37.00:0	+
2_239306268_A/C	2	239306268	C	ENSG00000204104	ENST00000373327	Transcript	NON_SYNONYMOUS_CODING	2080	1858	620	L/M	Ctg/Atg	-	ENSP=ENSP00000362424;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=TRAF3IP1	A	C/C,A/A	C	C	C	A/A,H/H	rs3739070	0.95	.	2.58	1.000	0.653	914	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.06;CAnc=C;DP=54;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=C;GRP=2.58;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=39.14;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=914;mSC=1.000;pSC=0.653	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1520,114,0:0,0:18,20:0,0:0,0:0:37.00:0;0/0:16:48.16:0,48,640:8,8:0,0:0,0:0,0:0:37.00:0	+
2_241463466_T/G	2	241463466	G	ENSG00000144504	ENST00000272972	Transcript	NON_SYNONYMOUS_CODING	1616	1401	467	N/K	aaC/aaA	-	ENSP=ENSP00000272972;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ANKMY1	T	G/G,G/G	G	G	G	A/A,A/A	.	1	.	1.06	0.109	0.008	982	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=86;Dels=0.00;FS=0.000;GAnc=G;GRP=1.06;HRun=0;HaplotypeScore=0.9997;MQ=38.32;MQ0=0;Map20=1;OAnc=G;QD=38.34;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=982;mSC=0.109;pSC=0.008	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1759,135,0:0,0:0,0:20,25:0,0:0:38.32:0;1/1:41:99:1595,123,0:0,0:0,0:18,23:0,0:0:37.00:0	-
2_241812428_C/T	2	241812428	T	ENSG00000172482	ENST00000307503	Transcript	NON_SYNONYMOUS_CODING	944	557	186	V/A	gTa/gCa	-	ENSP=ENSP00000302620;PolyPhen=benign(0.189);SIFT=tolerated(0.11);HGNC=AGXT	C	T/T,T/T	T	T	T	A/A,A/A	rs117195882	0.98	.	3.21	0.933	0.253	958	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.09;CAnc=T;DP=56;Dels=0.00;FS=0.000;GAnc=T;GRP=3.21;HRun=0;HaplotypeScore=1.9971;MQ=38.96;MQ0=0;Map20=1;OAnc=T;QD=36.57;TS=HPGOMC;TSseq=C,T,T,-,T,C;bSC=958;mSC=0.933;pSC=0.253	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1496,117,0:0,0:0,0:0,0:21,19:0:38.96:0;1/1:16:45.15:600,45,0:0,0:0,0:0,0:8,8:0:37.00:0	+
2_241812461_G/A	2	241812461	A	ENSG00000172482	ENST00000307503	Transcript	NON_SYNONYMOUS_CODING	977	590	197	Q/R	cAg/cGg	-	ENSP=ENSP00000302620;PolyPhen=benign(0);SIFT=tolerated(0.8);HGNC=AGXT	G	A/A,A/A	A	A	A	A/A,A/A	rs34664134	0.98	CpG	4.14	1.000	0.211	958	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.09;CAnc=A;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=A;GRP=4.14;HRun=0;HaplotypeScore=0.8321;MQ=39.51;MQ0=0;Map20=1;OAnc=A;QD=36.99;TS=HPGOMC;TSseq=G,A,A,-,A,A;bSC=958;mSC=1.000;pSC=0.211	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:90.29:1180,90,0:16,15:0,0:0,0:0,0:0:39.51:0;1/1:19:57.19:759,57,0:6,13:0,0:0,0:0,0:0:37.00:0	+
2_242012782_G/A	2	242012782	A	ENSG00000162804	ENST00000401884	Transcript	NON_SYNONYMOUS_CODING	3919	3919	1307	K/E	Aag/Gag	-	ENSP=ENSP00000384871;PolyPhen=benign(0);HGNC=SNED1	G	G/G,A/A	A	A	A	H/H,A/A	rs6721364	1.0	.	2.1	0.951	0.011	884	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=A;DP=46;GAnc=A;GRP=2.1;HRun;MQ=37.99;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=884;mSC=0.951;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:30:90.27:0,90,1155:0,0:0,0:22,7:0,0:0:37.99:0;1/1:16:48.16:631,48,0:13,3:0,0:0,0:0,0:0:37.00:0	+
3_9985673_T/C	3	9985673	C	ENSG00000163703	ENST00000326434	Transcript	NON_SYNONYMOUS_CODING	1220	1136	379	T/M	aCg/aTg	-	ENSP=ENSP00000321856;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CRELD1	T	C/C,T/T	C	C	C	A/A,H/H	rs73118372	0.93	CpG,RM	1.7	0.001	0.415	423	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.27;AMR_AF=0.03;AN=4;ASN_AF=0.02;BaseQRankSum=1.677;CAnc=C;CpG;DP=101;Dels=0.00;FS=0.000;GAnc=C;GRP=1.7;HRun=0;HaplotypeScore=3.8274;MQ=38.25;MQ0=0;MQRankSum=-0.632;Map20=1;OAnc=C;QD=37.64;RM;ReadPosRankSum=1.512;TS=HPGOMC;TSseq=T,C,C,T,C,C;UR;bSC=423;mSC=0.001;pSC=0.415	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2404,160,0:0,0:34,28:0,0:1,0:0:38.25:0;0/0:38:99:0,114,1503:0,0:0,0:0,0:17,21:0:37.00:0	+
3_12858395_A/G	3	12858395	G	ENSG00000144712	ENST00000295989	Transcript	NON_SYNONYMOUS_CODING	1934	1685	562	R/H	cGc/cAc	-	ENSP=ENSP00000295989;PolyPhen=benign(0);SIFT=tolerated(0.09);HGNC=CAND2	A	G/A,A/A	G	G	C	A/H,H/H	rs9838943	0.97	CpG	3.11	0.821	0.520	851	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.03;AFR_AF=0.09;AMR_AF=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=0.310;CAnc=G;CpG;DP=76;Dels=0.00;FS=9.010;GAnc=G;GRP=3.11;HRun=0;HaplotypeScore=2.9992;MQ=37.65;MQ0=0;MQRankSum=0.609;Map20=1;OAnc=C;QD=12.68;ReadPosRankSum=0.701;TS=HPGOMC;TSseq=A,G,G,C,C,C;bSC=851;mSC=0.821;pSC=0.520	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:46:99:613,0,893:18,9:0,0:8,11:0,0:0:37.65:0;0/0:30:90.29:0,90,1188:12,18:0,0:0,0:0,0:0:37.00:0	+
3_12942760_C/G	3	12942760	G	ENSG00000144711	ENST00000429247	Transcript	NON_SYNONYMOUS_CODING	3171	3068	1023	P/R	cCc/cGc	-	ENSP=ENSP00000402299;PolyPhen=unknown(0);SIFT=tolerated(0.27);HGNC=IQSEC1	C	C/C,G/G	G	G	G	H/H,A/A	rs185165059	0.99	CpG	3.06	0.000	.	895	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AN=4;CAnc=G;CpG;DP=43;EUR_AF=0.01;GAnc=G;GRP=3.06;HRun=2;MQ=38.84;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,N,G,N,G,G;bSC=895;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:22:66.21:0,66,870:0,0:11,11:0,0:0,0:0:38.84:0;1/1:21:63.21:840,63,0:0,0:0,0:8,13:0,0:0:37.00:0	-
3_37695260_A/G	3	37695260	G	ENSG00000144668	ENST00000264741	Transcript	NON_SYNONYMOUS_CODING	2151	1895	632	R/Q	cGg/cAg	-	ENSP=ENSP00000264741;PolyPhen=benign(0.002);SIFT=tolerated(0.27);HGNC=ITGA9	A	A/A,G/G	G	G	G	H/H,A/A	rs57547208	0.96	CpG	-3.67	0.204	.	756	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.06;AMR_AF=0.06;AN=4;CAnc=G;CpG;DP=58;EUR_AF=0.04;GAnc=G;GRP=-3.67;HRun=3;MQ=39.90;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,A;UR;bSC=756;mSC=0.204	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:30:90.28:0,90,1166:17,12:0,0:0,0:0,0:0:39.90:0;1/1:28:84.27:1097,84,0:0,0:0,0:14,14:0,0:0:37.00:0	+
3_38347851_A/G	3	38347851	G	ENSG00000144671	ENST00000273173	Transcript	NON_SYNONYMOUS_CODING	425	334	112	E/K	Gaa/Aaa	-	ENSP=ENSP00000273173;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLC22A14	A	A/A,G/G	G	G	G	H/H,A/A	rs2073714	0.91	CpG	3.35	0.003	.	608	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.09;AMR_AF=0.05;AN=4;ASN_AF=0.15;CAnc=G;CpG;DP=56;EUR_AF=0.07;GAnc=G;GRP=3.35;HRun=0;MQ=39.25;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=608;mSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:99:0,105,1381:19,20:0,0:0,0:0,0:0:39.25:0;1/1:17:51.17:680,51,0:0,0:0,0:7,10:0,0:0:37.00:0	+
3_39225767_T/C	3	39225767	C	ENSG00000168334	ENST00000340369	Transcript	NON_SYNONYMOUS_CODING	5399	5170	1724	V/I	Gtc/Atc	-	ENSP=ENSP00000343140;PolyPhen=benign(0);SIFT=tolerated(0.61);HGNC=XIRP1	T	T/T,C/C	C	C	C	H/H,A/A	rs9827576	0.99	CpG	1.68	.	.	611	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.06;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=68;GAnc=C;GRP=1.68;HRun=0;MQ=37.69;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,T,C;bSC=611	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,120,1575:0,0:0,0:0,0:20,23:0:37.69:0;1/1:25:72.22:933,72,0:0,0:15,10:0,0:0,0:0:37.00:0	-
3_44345521_G/A	3	44345521	A	ENSG00000173769	ENST00000309765	Transcript	NON_SYNONYMOUS_CODING	3980	3812	1271	Q/R	cAa/cGa	-	ENSP=ENSP00000310303;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C3orf77	G	G/G,A/A	A	A	A	H/H,A/A	rs112655871	1.0	CpG	1.7	0.886	.	244	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=A;CpG;DP=113;GAnc=A;GRP=1.7;HRun;MQ=37.44;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,T;UR;bSC=244;mSC=0.886	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:68:99:0,162,2552:0,2:0,0:34,32:0,0:0:37.44:0;1/1:45:99:1791,135,0:27,18:0,0:0,0:0,0:0:37.00:0	+
3_44762392_T/C	3	44762392	C	ENSG00000196653	ENST00000296091	Transcript	NON_SYNONYMOUS_CODING	339	83	28	P/L	cCg/cTg	-	ENSP=ENSP00000296091;PolyPhen=benign(0);SIFT=tolerated(0.15);HGNC=ZNF502	T	C/C,C/C	C	C	C	A/A,A/A	rs6798400	0.97	CpG	-1.89	0.000	.	323	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.07;AMR_AF=0.03;AN=4;BaseQRankSum=1.525;CAnc=C;CpG;DP=83;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-1.89;HRun;HaplotypeScore=1.9976;MQ=37.59;MQ0=0;MQRankSum=0.970;Map20=1;OAnc=C;QD=36.61;ReadPosRankSum=1.039;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=323;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1900,118,0:0,0:25,24:0,0:2,0:0:37.59:0;1/1:32:53.28:1108,53,0:0,1:20,10:0,0:1,0:0:37.00:0	+
3_44843440_A/G	3	44843440	G	ENSG00000163808	ENST00000326047	Transcript	NON_SYNONYMOUS_CODING	1632	1483	495	D/N	Gat/Aat	-	ENSP=ENSP00000324020;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KIF15	A	G/G,G/G	G	G	G	A/A,A/A	rs72875737	0.99	.	4.16	0.925	.	299	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;BaseQRankSum=-1.036;CAnc=G;DP=91;Dels=0.00;FS=0.000;GAnc=G;GRP=4.16;HRun=2;HaplotypeScore=0.9997;MQ=38.80;MQ0=0;MQRankSum=1.642;Map20=1;OAnc=G;QD=35.28;ReadPosRankSum=-0.884;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=299;mSC=0.925	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:67.46:1762,67,0:1,1:0,0:25,22:0,0:0:38.80:0;1/1:42:99:1666,126,0:0,0:0,0:23,19:0,0:0:37.00:0	+
3_44856499_A/G	3	44856499	G	ENSG00000163808	ENST00000326047	Transcript	NON_SYNONYMOUS_CODING	2629	2480	827	S/N	aGt/aAt	-	ENSP=ENSP00000324020;PolyPhen=benign(0.002);SIFT=tolerated(0.81);HGNC=KIF15	A	G/G,G/G	G	G	G	A/A,A/A	rs77079961	0.99	.	2.57	0.778	.	297	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AN=4;CAnc=G;DP=91;Dels=0.00;FS=0.000;GAnc=G;GRP=2.57;HRun=0;HaplotypeScore=0.0000;MQ=38.67;MQ0=0;Map20=1;OAnc=G;QD=39.04;TS=HPGOMC;TSseq=A,G,-,G,G,G;UR;bSC=297;mSC=0.778	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2102,160,0:0,0:0,0:36,17:0,0:0:38.67:0;1/1:38:99:1496,114,0:0,0:0,0:21,17:0,0:0:37.00:0	+
3_45130609_G/A	3	45130609	A	ENSG00000163814	ENST00000296129	Transcript	NON_SYNONYMOUS_CODING	2153	2018	673	V/A	gTg/gCg	-	ENSP=ENSP00000296129;PolyPhen=benign(0.002);SIFT=tolerated(0.57);HGNC=CDCP1	G	A/A,A/A	A	A	A	A/A,A/A	rs35428731	0.97	CpG	-2.58	0.013	.	730	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.05;AN=4;BaseQRankSum=-1.646;CAnc=A;CpG;DP=67;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=A;GRP=-2.58;HRun=0;HaplotypeScore=0.9894;MQ=37.49;MQ0=0;MQRankSum=1.386;Map20=1;OAnc=A;QD=33.72;ReadPosRankSum=0.520;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=730;mSC=0.013	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:77.35:1415,77,0:20,17:0,0:1,0:0,0:0:37.49:0;1/1:26:78.23:1003,78,0:18,8:0,0:0,0:0,0:0:37.00:0	-
3_47162659_C/T	3	47162659	T	ENSG00000181555	ENST00000409792	Transcript	NON_SYNONYMOUS_CODING	3510	3467	1156	H/R	cAc/cGc	-	ENSP=ENSP00000386759;PolyPhen=benign(0);SIFT=tolerated(0.64);HGNC=SETD2	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	4.34	1.000	.	14	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=88;GAnc=T;GRP=4.34;HRun=0;MQ=37.53;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=14;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:56:99:0,169,2189:0,0:26,30:0,0:0,0:0:37.53:0;1/1:32:96.31:1251,96,0:0,0:0,0:0,0:12,20:0:37.00:0	-
3_47165351_T/C	3	47165351	C	ENSG00000181555	ENST00000409792	Transcript	NON_SYNONYMOUS_CODING	818	775	259	V/I	Gta/Ata	-	ENSP=ENSP00000386759;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SETD2	T	T/T,C/C	C	C	C	H/H,A/A	.	1	.	1.11	0.746	.	14	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=65;GAnc=C;GRP=1.11;HRun=0;MQ=39.14;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,N;UR;bSC=14;mSC=0.746	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,123,1617:0,0:0,0:0,0:10,31:0:39.14:0;1/1:24:72.22:919,72,0:0,0:11,13:0,0:0,0:0:37.00:0	-
3_47469149_A/G	3	47469149	G	ENSG00000114650	ENST00000265565	Transcript	NON_SYNONYMOUS_CODING	832	419	140	T/I	aCc/aTc	-	ENSP=ENSP00000265565;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SCAP	A	G/G,G/G	G	G	G	A/A,A/A	.	1	.	4.3	1.000	.	20	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=64;Dels=0.00;FS=0.000;GAnc=G;GRP=4.3;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.96;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=20;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1475,111,0:0,0:0,0:18,19:0,0:0:37.00:0;1/1:27:81.26:1071,81,0:0,0:0,0:13,14:0,0:0:37.00:0	-
3_51737995_T/C	3	51737995	C	ENSG00000164081	ENST00000341333	Transcript	NON_SYNONYMOUS_CODING	996	905	302	P/L	cCc/cTc	-	ENSP=ENSP00000340969;PolyPhen=benign(0);SIFT=tolerated(0.45);HGNC=TEX264	T	C/C,C/C	C	C	C	A/A,A/A	rs61737032	0.96	.	-1.04	0.014	.	11	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.18;AMR_AF=0.02;AN=4;CAnc=C;DP=55;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.04;HRun;HaplotypeScore=0.0000;MQ=36.69;MQ0=3;Map20=1;OAnc=C;QD=36.12;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=11;mSC=0.014	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:96.31:1261,96,0:0,0:14,20:0,0:0,0:0:36.69:2;1/1:21:60.17:763,60,0:0,0:12,9:0,0:0,0:0:35.55:1	+
3_52012000_C/G	3	52012000	G	ENSG00000114786	ENST00000463937	Transcript	NON_SYNONYMOUS_CODING	259	183	61	W/C	tgG/tgC	-	ENSP=ENSP00000420487;PolyPhen=benign(0);SIFT=tolerated(1)	C	G/G,G/G	G	G	G	A/A,A/A	rs404527	0.93	.	5.05	1.000	.	187	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.29;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=G;DP=54;Dels=0.00;FS=0.000;GAnc=G;GRP=5.05;HRun;HaplotypeScore=0.0000;MQ=38.60;MQ0=0;Map20=1;OAnc=G;QD=38.47;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=187;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1456,111,0:0,0:0,0:17,20:0,0:0:38.60:0;1/1:17:51.16:668,51,0:0,0:0,0:10,7:0,0:0:37.00:0	+
3_52381865_A/G	3	52381865	G	ENSG00000114841	ENST00000420323	Transcript	NON_SYNONYMOUS_CODING	2242	1981	661	V/M	Gtg/Atg	-	ENSP=ENSP00000401514;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DNAH1	A	G/G,G/G	G	G	G	A/A,A/A	rs61734653	0.99	CpG	3.15	0.898	.	70	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.01;BaseQRankSum=0.650;CAnc=G;CpG;DP=64;Dels=0.00;FS=0.000;GAnc=G;GRP=3.15;HRun=0;HaplotypeScore=1.9995;MQ=38.24;MQ0=0;MQRankSum=0.505;Map20=1;OAnc=G;QD=37.10;ReadPosRankSum=1.588;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=70;mSC=0.898	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1814,104,0:1,0:0,0:23,24:0,0:0:38.24:0;1/1:16:48.16:631,48,0:0,0:0,0:8,8:0,0:0:37.00:0	+
3_52417991_G/A	3	52417991	A	ENSG00000114841	ENST00000420323	Transcript	NON_SYNONYMOUS_CODING	8527	8266	2756	M/V	Atg/Gtg	-	ENSP=ENSP00000401514;PolyPhen=benign(0);SIFT=tolerated(0.24);HGNC=DNAH1	G	A/A,A/A	A	A	A	A/A,A/A	rs61749019	0.99	CpG	4.38	0.779	.	68	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.01;BaseQRankSum=1.669;CAnc=A;CpG;DP=82;Dels=0.00;FS=3.090;GAnc=A;GRP=4.38;HRun=0;HaplotypeScore=3.9476;MQ=38.53;MQ0=0;MQRankSum=-1.606;Map20=1;OAnc=A;QD=35.37;ReadPosRankSum=-1.354;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=68;mSC=0.779	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2085,141,0:25,31:0,0:1,0:0,0:0:38.53:0;1/1:24:72.23:949,72,0:11,13:0,0:0,0:0,0:0:37.00:0	+
3_52436917_C/G	3	52436917	G	ENSG00000163930	ENST00000478368	Transcript	NON_SYNONYMOUS_CODING	433	433	145	H/D	Cat/Gat	-	ENSP=ENSP00000420647;PolyPhen=unknown(0);SIFT=tolerated(0.19);HGNC=BAP1	C	G/G,G/G	G	G	G	A/A,A/A	rs146661777	0.99	CpG	-1.33	0.000	.	68	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=49;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.33;HRun=4;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.08;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=68;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1480,111,0:0,0:0,0:24,14:0,0:0:37.00:0;1/1:11:33.11:440,33,0:0,0:0,0:4,7:0,0:0:37.00:0	-
3_53899178_T/C	3	53899178	C	ENSG00000056736	ENST00000288167	Transcript	NON_SYNONYMOUS_CODING	1361	1352	451	T/I	aCt/aTt	-	ENSP=ENSP00000288167;PolyPhen=benign(0);SIFT=tolerated(0.54);HGNC=IL17RB	T	C/C,T/T	C	C	C	A/A,H/H	rs2232350	0.96	.	0.308	0.000	.	584	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AMR_AF=0.02;AN=4;ASN_AF=0.15;BaseQRankSum=1.506;CAnc=C;DP=79;Dels=0.00;FS=0.000;GAnc=C;GRP=0.308;HRun=0;HaplotypeScore=0.9979;MQ=38.92;MQ0=0;MQRankSum=0.151;Map20=1;OAnc=C;QD=36.87;ReadPosRankSum=-0.377;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=584;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1729,106,0:0,0:23,22:0,0:1,0:0:38.92:0;0/0:33:99:0,99,1293:0,0:0,0:0,0:13,20:0:37.00:0	+
3_74313562_A/G	3	74313562	G	ENSG00000113805	ENST00000263665	Transcript	NON_SYNONYMOUS_CODING	3105	3077	1026	A/V	gCc/gTc	-	ENSP=ENSP00000263665;PolyPhen=benign(0);SIFT=tolerated(0.6);HGNC=CNTN3	A	G/G,A/A	G	G	G	A/A,H/H	.	1	.	4.99	0.988	.	878	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=81;Dels=0.00;FS=0.000;GAnc=G;GRP=4.99;HRun=2;HaplotypeScore=0.0000;MQ=38.16;MQ0=0;Map20=1;OAnc=G;QD=39.08;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=878;mSC=0.988	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:2026,153,0:0,0:0,0:40,10:0,0:0:38.16:0;0/0:30:90.28:0,90,1157:19,11:0,0:0,0:0,0:0:37.00:0	-
3_93779800_C/T	3	93779800	T	ENSG00000178700	ENST00000314636	Transcript	NON_SYNONYMOUS_CODING	893	556	186	N/D	Aat/Gat	-	ENSP=ENSP00000319170;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DHFRL1	C	T/T,C/C	T	T	T	A/A,H/H	.	1	.	.	.	.	417	.	AC=2;AF=0.50;AN=4;CAnc=T;DP=86;Dels=0.00;FS=0.000;GAnc=T;HRun;HaplotypeScore=0.0000;MQ=36.64;MQ0;OAnc=T;QD=35.65;TS=HPGOMC;TSseq=C,-,T,T,T,T;bSC=417	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1922,156,0:0,0:0,0:0,0:24,26:0:36.64:1;0/0:33:99:0,99,1282:0,0:16,17:0,0:0,0:0:36.31:0	-
3_93803061_C/T	3	93803061	T	ENSG00000178694	ENST00000314622	Transcript	NON_SYNONYMOUS_CODING	444	233	78	F/S	tTt/tCt	-	ENSP=ENSP00000318986;PolyPhen=benign(0);SIFT=tolerated(0.68);HGNC=NSUN3	C	T/T,C/C	T	T	T	A/A,H/H	.	1	.	3.45	0.261	.	423	1	AC=2;AF=0.50;AN=4;BaseQRankSum=-1.257;CAnc=T;DP=83;Dels=0.00;FS=0.000;GAnc=T;GRP=3.45;HRun;HaplotypeScore=1.9995;MQ=37.58;MQ0=0;MQRankSum=-0.713;Map20=1;OAnc=T;QD=36.37;ReadPosRankSum=-0.985;TS=HPGOMC;TSseq=C,T,T,T,T,C;bSC=423;mSC=0.261	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1924,113,0:0,0:0,1:0,0:25,26:0:37.58:0;0/0:31:93.30:0,93,1211:0,0:14,17:0,0:0,0:0:37.00:0	+
3_97591996_G/A	3	97591996	A	ENSG00000233280	ENST00000419587	Transcript	NON_SYNONYMOUS_CODING	2125	1958	653	N/S	aAt/aGt	-	ENSP=ENSP00000391551;PolyPhen=benign(0.002);SIFT=tolerated(1)	G	G/G,A/A	A	A	A	H/H,A/A	.	1	.	-7.49	0.000	.	303	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=77;GAnc=A;GRP=-7.49;HRun;MQ=38.67;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=303;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:53:99:0,160,2075:0,0:0,0:28,24:0,0:0:38.67:0;1/1:24:72.23:947,72,0:9,15:0,0:0,0:0,0:0:37.00:0	+
3_98073220_C/G	3	98073220	G	ENSG00000196098	ENST00000354924	Transcript	NON_SYNONYMOUS_CODING	523	523	175	D/H	Gac/Cac	-	ENSP=ENSP00000347003;PolyPhen=benign(0.001);SIFT=tolerated(0.48);HGNC=OR5K4	C	G/G,G/G	G	G	G	A/A,A/A	.	1	.	-2.78	0.000	.	757	0.5	AC=4;AF=1.00;AN=4;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=-2.78;HRun=0;HaplotypeScore=0.9578;MQ=37.61;MQ0=0;Map20=0.5;OAnc=G;QD=37.56;TS=HPGOM;TSseq=C,G,G,G,G;UR;bSC=757;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1874,144,0:0,0:0,0:19,28:1,0:0:37.61:0;1/1:26:78.25:1018,78,0:0,0:0,0:12,14:0,0:0:37.00:0	+
3_98073475_G/C	3	98073475	C	ENSG00000196098	ENST00000354924	Transcript	NON_SYNONYMOUS_CODING	778	778	260	R/G	Cga/Gga	-	ENSP=ENSP00000347003;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=OR5K4	G	C/C,C/C	C	C	C	A/A,A/A	.	1	CpG	-0.553	0.326	.	758	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.301;CAnc=C;CpG;DP=89;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.553;HRun=0;HaplotypeScore=2.9990;MQ=38.26;MQ0=0;MQRankSum=0.603;Map20=1;OAnc=C;QD=36.36;ReadPosRankSum=1.281;TS=HPGOM;TSseq=G,C,C,C,C;UR;bSC=758;mSC=0.326	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:98.44:1742,98,0:0,0:19,26:0,1:1,0:0:38.26:0;1/1:42:99:1651,126,0:0,0:22,20:0,0:0,0:0:37.00:0	+
3_108287049_G/A	3	108287049	A	ENSG00000163507	ENST00000295746	Transcript	NON_SYNONYMOUS_CODING	1303	1226	409	I/T	aTa/aCa	-	ENSP=ENSP00000295746;PolyPhen=benign(0);SIFT=tolerated(0.63);HGNC=KIAA1524	G	A/A,G/G	A	A	A	A/A,H/H	rs9856308	0.98	.	2.25	0.435	.	294	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.01;AN=4;CAnc=A;DP=108;Dels=0.00;FS=0.000;GAnc=A;GRP=2.25;HRun=0;HaplotypeScore=0.0000;MQ=38.24;MQ0=0;Map20=1;OAnc=A;QD=37.97;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=294;mSC=0.435	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:72:99:2767,211,0:34,38:0,0:0,0:0,0:0:38.24:0;0/0:36:99:0,108,1418:0,0:0,0:13,23:0,0:0:37.00:0	-
3_110866284_C/G	3	110866284	G	ENSG00000177707	ENST00000493615	Transcript	NON_SYNONYMOUS_CODING	1426	1174	392	V/L	Gtg/Ctg	-	ENSP=ENSP00000420579;PolyPhen=benign(0);SIFT=tolerated(0.98);HGNC=PVRL3	C	C/C,G/G	G	G	G	H/H,A/A	.	1	.	-9.64	0.101	.	642	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=76;GAnc=G;GRP=-9.64;HRun=0;MQ=39.41;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,A,G;UR;bSC=642;mSC=0.101	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,141,1860:0,0:27,20:0,0:0,0:0:39.41:0;1/1:29:87.28:1147,87,0:0,0:0,0:10,19:0,0:0:37.00:0	+
3_111780741_C/T	3	111780741	T	ENSG00000176040	ENST00000419127	Transcript	NON_SYNONYMOUS_CODING	1122	1040	347	V/A	gTa/gCa	-	ENSP=ENSP00000411645;PolyPhen=benign(0.002);SIFT=tolerated(0.4);HGNC=TMPRSS7	C	T/C,T/T	T	T	T	A/H,A/A	rs16859132	0.95	.	5.62	0.996	.	661	1	1000gALT=T;AC=3;AF=0.75;AF1000g=0.05;AFR_AF=0.17;AMR_AF=0.02;AN=4;ASN_AF=0.02;BaseQRankSum=0.301;CAnc=T;DP=77;Dels=0.00;FS=4.862;GAnc=T;GRP=5.62;HRun=0;HaplotypeScore=0.9916;MQ=38.92;MQ0=0;MQRankSum=0.397;Map20=1;OAnc=T;QD=21.00;ReadPosRankSum=0.084;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=661;mSC=0.996	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:46:99:996,0,424:0,0:10,5:0,0:12,16:0:38.92:0;1/1:31:93.29:1188,93,0:0,0:0,0:0,0:19,12:0:37.00:0	+
3_112188609_T/G	3	112188609	G	ENSG00000186265	ENST00000334529	Transcript	NON_SYNONYMOUS_CODING	793	590	197	T/N	aCc/aAc	-	ENSP=ENSP00000333919;PolyPhen=benign(0.003);SIFT=tolerated(0.38);HGNC=BTLA	T	G/T,G/G	G	G	G	A/H,A/A	rs76844316	0.96	.	-0.527	0.823	.	685	1	1000gALT=G;AC=3;AF=0.75;AF1000g=0.04;AFR_AF=0.05;AMR_AF=0.06;AN=4;ASN_AF=0.07;BaseQRankSum=1.228;CAnc=G;DP=96;Dels=0.00;FS=11.779;GAnc=G;GRP=-0.527;HRun=2;HaplotypeScore=1.5741;MQ=38.96;MQ0=0;MQRankSum=1.107;Map20=1;OAnc=G;QD=14.89;ReadPosRankSum=0.242;TS=HPGOMC;TSseq=T,G,G,G,G,A;bSC=685;mSC=0.823	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:55:99:849,0,887:0,0:0,0:4,22:12,15:0:38.96:0;1/1:41:99:1613,123,0:0,0:0,0:18,23:0,0:0:37.00:0	-
3_112729549_C/T	3	112729549	T	ENSG00000163608	ENST00000314400	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	1108	916	306	K/E	Aag/Gag	-	ENSP=ENSP00000320251;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=C3orf17	C	C/C,T/C	T	T	T	H/H,A/H	.	1	.	-1.51	0.829	.	621	0.5	AC=1;AF=0.25;AN=4;CAnc=T;DP=84;GAnc=T;GRP=-1.51;HRun=2;MQ=40.93;MQ0=0;Map20=0.5;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=621;mSC=0.829	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,153,2000:0,0:21,30:0,0:0,0:0:40.93:0;0/1:33:99:725,0,381:0,0:7,5:0,0:12,9:0:37.00:0	-
3_113049270_T/G	3	113049270	G	ENSG00000206530	ENST00000393845	Transcript	NON_SYNONYMOUS_CODING	3928	3861	1287	N/K	aaC/aaA	-	ENSP=ENSP00000377428;PolyPhen=benign(0.017);SIFT=tolerated(0.5);HGNC=WDR52	T	G/G,G/G	G	G	G	A/A,A/A	.	0.93	CpG	-5.7	0.000	.	343	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.18;AMR_AF=0.03;AN=4;ASN_AF=0.07;BaseQRankSum=0.706;CAnc=G;CpG;DP=89;Dels=0.00;EUR_AF=0.02;FS=4.771;GAnc=G;GRP=-5.7;HRun=0;HaplotypeScore=2.9992;MQ=38.08;MQ0=0;MQRankSum=1.668;Map20=1;OAnc=G;QD=37.02;ReadPosRankSum=0.898;TS=HPGOMC;TSseq=T,G,G,A,G,C;UR;bSC=343;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2069,123,0:0,1:0,0:17,36:1,0:0:38.08:0;1/1:34:99:1297,99,0:0,1:0,0:15,18:0,0:0:37.00:0	-
3_113127991_C/A	3	113127991	A	ENSG00000206530	ENST00000295868	Transcript	NON_SYNONYMOUS_CODING	1015	852	284	N/K	aaT/aaG	-	ENSP=ENSP00000295868;PolyPhen=benign(0);SIFT=tolerated(0.76);HGNC=WDR52	C	A/A,A/A	A	A	A	A/A,A/A	rs16845107	0.91	.	-1.87	0.653	.	354	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.08;AMR_AF=0.04;AN=4;ASN_AF=0.16;BaseQRankSum=1.165;CAnc=A;DP=92;Dels=0.00;EUR_AF=0.06;FS=3.254;GAnc=A;GRP=-1.87;HRun=0;HaplotypeScore=0.9993;MQ=39.06;MQ0=0;MQRankSum=-1.480;Map20=1;OAnc=A;QD=35.75;ReadPosRankSum=-1.228;TS=HPGOMC;TSseq=C,A,A,A,A,A;UR;bSC=354;mSC=0.653	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2071,129,0:29,24:0,1:0,0:0,0:0:39.06:0;1/1:35:99:1389,105,0:12,23:0,0:0,0:0,0:0:37.00:0	-
3_113849984_T/C	3	113849984	C	ENSG00000151577	ENST00000281274	Transcript	NON_SYNONYMOUS_CODING	1320	889	297	D/N	Gat/Aat	-	ENSP=ENSP00000281274;PolyPhen=unknown(0);HGNC=DRD3	T	C/C,T/T	C	C	C	A/A,H/H	rs61735073	0.98	.	3.73	1.000	.	533	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=C;DP=76;Dels=0.00;FS=0.000;GAnc=C;GRP=3.73;HRun=0;HaplotypeScore=0.9867;MQ=39.43;MQ0=0;Map20=1;OAnc=C;QD=37.80;TS=HPGOMC;TSseq=T,C,-,C,C,T;UR;bSC=533;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1696,129,0:0,0:15,27:0,0:1,0:0:39.43:0;0/0:32:96.27:0,96,1214:0,0:0,0:0,0:18,14:0:37.00:0	-
3_115382714_T/A	3	115382714	A	ENSG00000172020	ENST00000393780	Transcript	NON_SYNONYMOUS_CODING	557	89	30	D/V	gAt/gTt	-	ENSP=ENSP00000377372;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GAP43	T	T/T,A/A	A	A	A	H/H,A/A	.	1	.	-0.63	0.000	.	914	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=70;GAnc=A;GRP=-0.63;HRun=0;MQ=37.42;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=T,A,A,A,A,A;UR;bSC=914;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,135,1781:1,0:0,0:0,0:31,16:0:37.42:0;1/1:22:66.20:841,66,0:12,10:0,0:0,0:0,0:0:36.07:0	+
3_119445092_T/A	3	119445092	A	ENSG00000183833	ENST00000273390	Transcript	NON_SYNONYMOUS_CODING	834	757	253	T/S	Act/Tct	-	ENSP=ENSP00000273390;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=C3orf15	T	T/T,A/T	A	A	A	H/H,A/H	rs9817771	0.99	.	4.44	0.962	.	620	1	1000gALT=A;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.04;AN=4;CAnc=A;DP=60;GAnc=A;GRP=4.44;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=620;mSC=0.962	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:99:0,105,1354:0,0:0,0:0,0:13,23:0:37.00:0;0/1:24:99:404,0,399:7,5:0,0:0,0:9,3:0:37.00:0	+
3_120469520_T/C	3	120469520	C	ENSG00000153767	ENST00000283875	Transcript	NON_SYNONYMOUS_CODING	214	121	41	P/S	Ccc/Tcc	-	ENSP=ENSP00000283875;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GTF2E1	T	T/T,C/C	C	C	C	H/H,A/A	.	1	.	4.88	1.000	.	.	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=68;GAnc=C;GRP=4.88;HRun=2;MQ=38.60;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,102,1351:0,0:0,0:0,0:20,17:0:38.60:0;1/1:31:93.28:1181,93,0:0,0:11,20:0,0:0,0:0:37.00:0	+
3_121410270_G/C	3	121410270	C	ENSG00000173230	ENST00000340645	Transcript	NON_SYNONYMOUS_CODING	8052	7926	2642	Q/H	caG/caC	-	ENSP=ENSP00000341848;PolyPhen=benign(0);HGNC=GOLGB1	G	G/G,C/C	C	C	C	H/H,A/A	.	1	.	1.51	0.053	.	132	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=69;GAnc=C;GRP=1.51;HRun=0;MQ=39.14;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=132;mSC=0.053	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,123,1610:0,0:0,0:19,22:0,0:0:39.14:0;1/1:28:84.26:1096,84,0:0,0:15,13:0,0:0,0:0:37.00:0	-
3_122338637_G/A	3	122338637	A	ENSG00000173200	ENST00000310366	Transcript	NON_SYNONYMOUS_CODING	403	308	103	K/R	aAa/aGa	-	ENSP=ENSP00000308436;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PARP15	G	G/G,A/A	A	A	A	H/H,A/A	rs6793271	0.91	.	3.94	0.832	.	789	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.33;AMR_AF=0.02;AN=4;ASN_AF=0.05;CAnc=A;DP=69;GAnc=A;GRP=3.94;HRun=2;MQ=39.14;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=789;mSC=0.832	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,123,1611:0,0:0,0:19,21:0,0:0:39.14:0;1/1:28:84.26:1106,84,0:10,18:0,0:0,0:0,0:0:37.00:0	+
3_124515498_T/C	3	124515498	C	ENSG00000082781	ENST00000296181	Transcript	NON_SYNONYMOUS_CODING	1727	1430	477	S/N	aGc/aAc	-	ENSP=ENSP00000296181;PolyPhen=benign(0.001);SIFT=tolerated(0.9);HGNC=ITGB5	T	C/C,T/T	C	C	C	A/A,H/H	rs2291087	0.96	.	3.49	0.169	.	606	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.08;AMR_AF=0.04;AN=4;ASN_AF=0.02;BaseQRankSum=-0.683;CAnc=C;DP=47;Dels=0.00;EUR_AF=0.03;FS=3.424;GAnc=C;GRP=3.49;HRun=0;HaplotypeScore=3.9959;MQ=37.90;MQ0=0;MQRankSum=-0.158;Map20=1;OAnc=C;QD=35.64;ReadPosRankSum=-0.998;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=606;mSC=0.169	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:59.31:1209,59,0:0,0:18,14:0,0:0,1:0:37.90:0;0/0:14:42.14:0,42,560:0,0:0,0:0,0:7,7:0:37.00:0	-
3_124515646_A/C	3	124515646	C	ENSG00000082781	ENST00000296181	Transcript	NON_SYNONYMOUS_CODING	1579	1282	428	V/L	Gtg/Ttg	-	ENSP=ENSP00000296181;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ITGB5	A	C/C,A/A	C	C	C	A/A,H/H	rs2291090	0.96	.	5.11	0.920	.	606	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.08;AMR_AF=0.04;AN=4;ASN_AF=0.02;CAnc=C;DP=66;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=5.11;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.25;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=606;mSC=0.920	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1525,117,0:0,0:22,17:0,0:0,0:0:37.00:0;0/0:27:81.26:0,81,1063:18,9:0,0:0,0:0,0:0:37.00:0	-
3_124826408_T/C	3	124826408	C	ENSG00000221955	ENST00000314584	Transcript	NON_SYNONYMOUS_CODING	1672	881	294	R/K	aGg/aAg	-	ENSP=ENSP00000323632;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=SLC12A8	T	C/C,C/C	C	C	C	A/A,A/A	rs6773138	0.91	.	0.269	0.001	.	849	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.28;AMR_AF=0.04;AN=4;ASN_AF=0.06;CAnc=C;DP=75;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=0.269;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=38.11;TS=HPGOMC;TSseq=T,C,C,C,T,C;bSC=849;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1443,111,0:0,0:16,20:0,0:0,0:0:37.81:0;1/1:38:99:1467,114,0:0,0:18,20:0,0:0,0:0:37.00:0	-
3_127329785_G/C	3	127329785	C	ENSG00000073111	ENST00000491422	Transcript	NON_SYNONYMOUS_CODING	1180	1181	394	S/W	tCg/tGg	-	ENSP=ENSP00000420528;PolyPhen=possibly_damaging(0.669);SIFT=deleterious(0.02);HGNC=MCM2	G	C/C,C/C	C	C	C	A/A,A/A	rs13320642	0.97	CpG,RM	1.3	0.000	.	645	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.10;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=73;Dels=0.00;FS=0.000;GAnc=C;GRP=1.3;HRun=0;HaplotypeScore=0.0000;MQ=38.32;MQ0=0;Map20=1;OAnc=C;QD=38.59;RM;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=645;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1770,135,0:0,0:23,22:0,0:0,0:0:38.32:0;1/1:28:84.27:1099,84,0:0,0:9,19:0,0:0,0:0:37.00:0	+
3_129546729_T/C	3	129546729	C	ENSG00000172765	ENST00000393238	Transcript	NON_SYNONYMOUS_CODING	834	493	165	S/G	Agc/Ggc	-	ENSP=ENSP00000376930;PolyPhen=benign(0.018);SIFT=deleterious(0.05);HGNC=TMCC1	C	T/T,T/T	T	T	T	A/A,A/A	rs784689	0.97	.	3.62	1.000	.	514	1	1000gALT=C;AC=0;AF=0.00;AF1000g=0.97;AFR_AF=0.88;AMR_AF=0.99;AN=4;ASN_AF=1.00;CAnc=T;DP=53;EUR_AF=1.00;GAnc=T;GRP=3.62;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=T,T,-,T,T,T;UR;bSC=514;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:35:99:0,105,1366:0,0:0,0:0,0:19,15:0:37.00:0;0/0:18:54.18:0,54,720:0,0:0,0:0,0:11,7:0:37.00:0	-
3_130733125_A/G	3	130733125	G	ENSG00000034533	ENST00000264992	Transcript	NON_SYNONYMOUS_CODING	2258	1816	606	H/Y	Cat/Tat	-	ENSP=ENSP00000264992;PolyPhen=benign(0);SIFT=tolerated(0.74);HGNC=ASTE1	A	A/A,G/G	G	G	G	H/H,A/A	rs111692831	1.0	.	4.02	0.001	.	393	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=G;DP=57;GAnc=G;GRP=4.02;HRun=0;MQ=40.21;MQ0=0;Map20=1;OAnc=G;TS=HPGGOMC;TSseq=A,G,G,G,G,G,G,G;UR;bSC=393;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:99:0,108,1418:17,19:0,0:0,0:0,0:0:40.21:0;1/1:21:63.20:821,63,0:0,0:0,0:14,7:0,0:0:37.00:0	-
3_133647493_G/C	3	133647493	C	ENSG00000221972	ENST00000408895	Transcript	NON_SYNONYMOUS_CODING	1164	155	52	R/T	aGg/aCg	-	ENSP=ENSP00000386219;PolyPhen=benign(0);HGNC=C3orf36	G	C/C,C/C	C	C	C	A/A,A/A	rs76311816	0.97	CpG	-0.464	0.000	.	877	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.10;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=59;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.464;HRun;HaplotypeScore=0.0000;MQ=37.90;MQ0=0;Map20=1;OAnc=C;QD=38.60;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=877;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1307,99,0:0,0:17,16:0,0:0,0:0:37.90:0;1/1:26:78.25:1017,78,0:0,0:12,14:0,0:0,0:0:37.00:0	-
3_138219674_A/T	3	138219674	T	ENSG00000114107	ENST00000264982	Transcript	NON_SYNONYMOUS_CODING	1538	1271	424	H/L	cAt/cTt	-	ENSP=ENSP00000264982;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CEP70	A	A/A,T/T	T	T	T	H/H,A/A	rs34053101	0.99	.	4.74	1.000	.	435	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;CAnc=T;DP=79;GAnc=T;GRP=4.74;HRun=0;MQ=38.32;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=A,T,T,T,T,T;UR;bSC=435;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,132,1742:23,22:0,0:0,0:0,0:0:38.32:0;1/1:34:99:1326,102,0:0,0:0,0:0,0:20,14:0:37.00:0	-
3_160138619_T/C	3	160138619	C	ENSG00000113810	ENST00000344722	Transcript	NON_SYNONYMOUS_CODING	2294	1949	650	T/I	aCa/aTa	-	ENSP=ENSP00000341382;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SMC4	T	C/C,T/T	C	C	C	A/A,H/H	.	1	.	4.55	1.000	.	328	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=96;Dels=0.00;FS=0.000;GAnc=C;GRP=4.55;HRun=0;HaplotypeScore=0.0000;MQ=38.39;MQ0=0;Map20=1;OAnc=C;QD=39.13;TS=HPGOMC;TSseq=T,C,C,N,C,C;UR;bSC=328;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2537,193,0:0,0:33,31:0,0:0,0:0:38.39:0;0/0:32:96.32:0,96,1276:0,0:0,0:0,0:18,14:0:36.88:0	+
3_164700041_G/C	3	164700041	C	ENSG00000090402	ENST00000264382	Transcript	NON_SYNONYMOUS_CODING	5468	5405	1802	S/T	aGt/aCt	-	ENSP=ENSP00000264382;PolyPhen=benign(0);SIFT=tolerated(0.85);HGNC=SI	G	G/G,C/C	C	C	C	H/H,A/A	rs9917722	0.96	.	-8.72	0.000	.	629	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;CAnc=C;DP=97;GAnc=C;GRP=-8.72;HRun=0;MQ=38.81;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,T,T;UR;bSC=629;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:65:99:0,193,2559:0,1:0,0:15,49:0,0:0:38.81:0;1/1:32:96.31:1255,96,0:0,0:14,18:0,0:0,0:0:37.00:0	-
3_165503962_G/A	3	165503962	A	ENSG00000114200	ENST00000264381	Transcript	NON_SYNONYMOUS_CODING	1822	1655	552	L/S	tTa/tCa	-	ENSP=ENSP00000264381;PolyPhen=benign(0.001);SIFT=tolerated(0.38);HGNC=BCHE	G	G/G,A/A	A	A	A	H/H,A/A	rs116333990	1.0	.	2.16	0.585	.	739	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=A;DP=95;GAnc=A;GRP=2.16;HRun;MQ=37.56;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,G,A;UR;bSC=739;mSC=0.585	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:53:99:0,113,1917:0,0:1,0:24,27:1,0:0:37.56:0;1/1:42:99:1676,126,0:21,21:0,0:0,0:0,0:0:37.00:0	-
3_167747022_C/T	3	167747022	T	ENSG00000173905	ENST00000309027	Transcript	NON_SYNONYMOUS_CODING	1477	1418	473	E/G	gAa/gGa	-	ENSP=ENSP00000309893;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GOLIM4	C	T/T,C/C	T	T	T	A/A,H/H	rs61743591	0.97	.	4.97	1.000	.	798	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=T;DP=83;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=T;GRP=4.97;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.30;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=798;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1795,138,0:0,0:0,0:0,0:18,28:0:37.00:0;0/0:37:99:0,111,1413:0,0:15,22:0,0:0,0:0:37.00:0	-
3_182994744_C/T	3	182994744	T	ENSG00000053524	ENST00000328913	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2076	1778	593	N/S	aAt/aGt	-	ENSP=ENSP00000328118;PolyPhen=benign(0);SIFT=tolerated(0.5);HGNC=MCF2L2	C	C/C,T/T	T	T	T	H/H,A/A	rs61731401	0.98	.	3.66	1.000	.	734	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=T;DP=96;GAnc=T;GRP=3.66;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,-,T;UR;bSC=734;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,157,2057:0,0:23,29:0,0:0,0:0:37.00:0;1/1:44:99:1725,132,0:0,0:0,0:0,0:26,18:0:37.00:0	-
3_183029490_C/T	3	183029490	T	ENSG00000053524	ENST00000328913	Transcript	NON_SYNONYMOUS_CODING	1122	824	275	Y/C	tAt/tGt	-	ENSP=ENSP00000328118;PolyPhen=benign(0);SIFT=tolerated(0.11);HGNC=MCF2L2	C	C/C,T/T	T	T	T	H/H,A/A	.	1	.	-9.16	0.000	.	840	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=104;GAnc=T;GRP=-9.16;HRun=0;MQ=39.32;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,C,T;UR;bSC=840;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:63:99:0,190,2472:0,0:29,34:0,0:0,0:0:39.32:0;1/1:41:99:1636,123,0:0,0:0,0:0,0:24,17:0:37.00:0	-
3_183442219_A/G	3	183442219	G	ENSG00000163872	ENST00000305135	Transcript	NON_SYNONYMOUS_CODING	745	550	184	V/I	Gtt/Att	-	ENSP=ENSP00000306983;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=YEATS2	A	G/A,A/A	G	G	G	A/H,H/H	rs16858033	0.94	.	0.783	0.018	.	561	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.06;AFR_AF=0.11;AMR_AF=0.02;AN=4;ASN_AF=0.13;BaseQRankSum=-2.003;CAnc=G;DP=74;Dels=0.00;FS=1.186;GAnc=G;GRP=0.783;HRun=0;HaplotypeScore=2.9861;MQ=40.08;MQ0=0;MQRankSum=-1.252;Map20=1;OAnc=G;QD=10.32;ReadPosRankSum=0.114;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=561;mSC=0.018	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:47:99:515,0,1015:13,16:0,0:9,8:0,1:0:40.08:0;0/0:27:81.26:0,81,1064:14,13:0,0:0,0:0,0:0:37.00:0	+
3_184045410_T/C	3	184045410	C	ENSG00000114867	ENST00000319274	Transcript	NON_SYNONYMOUS_CODING	4095	3698	1233	P/L	cCg/cTg	-	ENSP=ENSP00000323737;PolyPhen=benign(0.001);SIFT=tolerated(0.44);HGNC=EIF4G1	T	C/C,C/C	C	C	C	A/A,A/A	rs2230570	0.97	CpG	0.492	0.001	.	254	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.09;AMR_AF=0.03;AN=4;CAnc=C;CpG;DP=67;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=0.492;HRun=5;HaplotypeScore=0.0000;MQ=38.35;MQ0=0;Map20=1;OAnc=C;QD=38.45;TS=HPGOMC;TSseq=T,C,C,C,T,C;bSC=254;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1725,132,0:0,0:27,17:0,0:0,0:0:38.35:0;1/1:23:69.22:902,69,0:0,0:11,12:0,0:0,0:0:37.00:0	+
3_186460110_G/C	3	186460110	C	ENSG00000113889	ENST00000265023	Transcript	NON_SYNONYMOUS_CODING	2137	1925	642	A/G	gCc/gGc	-	ENSP=ENSP00000265023;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KNG1	G	G/G,C/C	C	C	C	H/H,A/A	rs5030087	0.97	.	4.4	0.829	.	835	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.06;AMR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=C;DP=107;EUR_AF=0.03;GAnc=C;GRP=4.4;HRun=2;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=835;mSC=0.829	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:66:99:0,196,2566:0,1:0,0:21,43:0,0:0:37.00:0;1/1:41:99:1590,123,0:0,0:18,23:0,0:0,0:0:37.00:0	+
4_1656922_G/A	4	1656922	A	ENSG00000174137	ENST00000308132	Transcript	NON_SYNONYMOUS_CODING	858	665	222	L/P	cTg/cCg	-	ENSP=ENSP00000310057;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAM53A	G	G/G,A/G	A	A	A	H/H,A/H	.	1	CpG	3.39	0.001	0.073	906	1	AC=1;AF=0.25;AN=4;CAnc=A;CpG;DP=50;GAnc=A;GRP=3.39;HRun=0;MQ=37.73;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=906;mSC=0.001;pSC=0.073	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,120,1593:0,0:0,1:18,22:0,0:0:37.73:0;0/1:9:92.93:207,0,93:3,3:0,0:1,2:0,0:0:37.00:0	-
4_2949274_G/C	4	2949274	C	ENSG00000087269	ENST00000314262	Transcript	NON_SYNONYMOUS_CODING	1527	1478	493	R/T	aGa/aCa	-	ENSP=ENSP00000315674;PolyPhen=benign(0.005);SIFT=tolerated(0.59);HGNC=NOP14	G	C/C,C/C	C	C	C	A/A,A/A	rs144621452	1.0	.	2.03	0.004	0.186	620	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-1.636;CAnc=C;DP=64;Dels=0.00;FS=0.000;GAnc=C;GRP=2.03;HRun=0;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;MQRankSum=-1.059;Map20=1;OAnc=C;QD=35.55;ReadPosRankSum=0.963;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=620;mSC=0.004;pSC=0.186	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:68.34:1313,68,0:0,0:9,26:0,1:0,0:0:37.83:0;1/1:28:84.27:1113,84,0:0,0:9,19:0,0:0,0:0:37.00:0	-
4_3174845_A/C	4	3174845	C	ENSG00000197386	ENST00000355072	Transcript	NON_SYNONYMOUS_CODING	4298	4153	1385	H/N	Cac/Aac	-	ENSP=ENSP00000347184;PolyPhen=benign(0);SIFT=tolerated(0.5);HGNC=HTT	A	C/C,C/C	C	C	C	A/A,A/A	rs3025837	0.96	.	5.1	0.787	0.987	428	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.02;AN=4;CAnc=C;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=5.1;HRun=0;HaplotypeScore=0.0000;MQ=36.92;MQ0=0;Map20=1;OAnc=C;QD=36.75;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=428;mSC=0.787;pSC=0.987	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1687,132,0:0,0:26,19:0,0:0,0:0:36.92:0;1/1:25:35.23:901,35,0:0,1:15,9:0,0:0,0:0:37.00:0	+
4_3317943_T/G	4	3317943	G	ENSG00000159788	ENST00000336727	Transcript	NON_SYNONYMOUS_CODING	950	46	16	A/S	Gcg/Tcg	-	ENSP=ENSP00000338509;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RGS12	T	G/G,T/T	G	G	G	A/A,H/H	rs111680504	0.96	.	2.44	0.000	0.235	693	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.02;AN=4;CAnc=G;DP=64;Dels=0.00;FS=0.000;GAnc=G;GRP=2.44;HRun;HaplotypeScore=0.9958;MQ=38.03;MQ0=0;Map20=1;OAnc=G;QD=38.65;TS=HPGOMC;TSseq=T,G,G,G,A,G;bSC=693;mSC=0.000;pSC=0.235	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1888,144,0:0,0:0,0:20,27:0,0:0:38.03:0;0/0:16:48.15:0,48,628:0,0:0,0:0,0:9,7:0:37.00:0	+
4_5642249_C/T	4	5642249	T	ENSG00000173040	ENST00000310917	Transcript	NON_SYNONYMOUS_CODING	1954	1222	408	S/G	Agt/Ggt	-	ENSP=ENSP00000311683;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=EVC2	C	T/T,T/T	T	T	T	A/A,A/A	rs145277501	1.0	.	3.82	0.135	0.841	976	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=T;DP=70;Dels=0.00;FS=0.000;GAnc=T;GRP=3.82;HRun=0;HaplotypeScore=0.0000;MQ=39.57;MQ0=0;Map20=1;OAnc=T;QD=37.19;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=976;mSC=0.135;pSC=0.841	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1297,99,0:0,0:0,0:0,0:20,14:0:39.57:0;1/1:36:99:1427,108,0:0,0:0,0:0,0:12,24:0:37.00:0	-
4_22749692_T/C	4	22749692	C	ENSG00000249948	ENST00000508166	Transcript	NON_SYNONYMOUS_CODING	1162	1060	354	R/C	Cgt/Tgt	-	ENSP=ENSP00000427458;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GBA3	T	C/C,C/C	C	C	C	A/A,A/A	rs16873108	0.96	CpG	3.85	0.941	0.695	845	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.01;AN=4;BaseQRankSum=0.620;CAnc=C;CpG;DP=78;Dels=0.00;FS=3.025;GAnc=C;GRP=3.85;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-0.148;Map20=1;OAnc=C;QD=34.91;ReadPosRankSum=-0.975;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=845;mSC=0.941;pSC=0.695	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:46.40:1499,46,0:0,0:21,18:0,0:2,0:0:37.00:0;1/1:36:99:1377,105,0:0,0:21,15:0,0:0,0:0:37.00:0	+
4_25673231_T/G	4	25673231	G	ENSG00000157765	ENST00000382051	Transcript	NON_SYNONYMOUS_CODING	986	936	312	M/I	atG/atT	-	ENSP=ENSP00000371483;PolyPhen=benign(0.002);SIFT=tolerated(0.18);HGNC=SLC34A2	T	G/G,G/G	G	G	G	A/A,A/A	rs112461275	0.99	.	3.41	0.677	0.073	929	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;BaseQRankSum=-0.685;CAnc=G;DP=66;Dels=0.00;FS=0.000;GAnc=G;GRP=3.41;HRun=0;HaplotypeScore=1.9995;MQ=39.00;MQ0=0;MQRankSum=0.443;Map20=1;OAnc=G;QD=35.95;ReadPosRankSum=0.846;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=929;mSC=0.677;pSC=0.073	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:89.41:1615,89,0:0,1:0,0:21,21:0,1:0:39.00:0;1/1:22:66.22:880,66,0:0,0:0,0:9,13:0,0:0:37.00:0	+
4_38933869_C/T	4	38933869	T	ENSG00000197712	ENST00000355404	Transcript	NON_SYNONYMOUS_CODING	833	716	239	L/S	tTg/tCg	-	ENSP=ENSP00000347569;PolyPhen=benign(0);SIFT=tolerated(0.92);HGNC=FAM114A1	C	T/T,T/T	T	T	T	A/A,A/A	rs36058104	0.99	CpG	4.43	0.001	0.666	839	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;BaseQRankSum=-1.216;CAnc=T;CpG;DP=81;Dels=0.00;FS=4.416;GAnc=T;GRP=4.43;HRun;HaplotypeScore=0.0000;MQ=40.39;MQ0=0;MQRankSum=-0.479;Map20=1;OAnc=T;QD=33.63;ReadPosRankSum=-1.732;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=839;mSC=0.001;pSC=0.666	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1748,101,0:0,0:1,0:0,0:18,31:0:40.39:0;1/1:30:90.29:1159,90,0:0,0:0,0:0,0:14,16:0:37.00:0	+
4_57469460_T/C	4	57469460	C	ENSG00000249693	ENST00000512175	Transcript	NON_SYNONYMOUS_CODING	1437	1369	457	R/W	Cgg/Tgg	-	ENSP=ENSP00000456850;PolyPhen=benign(0);SIFT=tolerated(0.42);HGNC=THEGL	T	T/T,C/C	C	C	C	H/H,A/A	rs115350220	0.98	CpG	1.81	0.055	0.176	902	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=60;GAnc=C;GRP=1.81;HRun;MQ=37.90;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=902;mSC=0.055;pSC=0.176	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:90.30:0,90,1202:0,0:0,0:0,0:19,14:0:37.90:0;1/1:27:81.27:1080,81,0:0,0:15,12:0,0:0,0:0:37.00:0	+
4_57777098_T/A	4	57777098	A	ENSG00000084093	ENST00000309042	Transcript	NON_SYNONYMOUS_CODING	608	294	98	E/D	gaA/gaT	-	ENSP=ENSP00000311816;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=REST	T	T/T,A/A	A	A	A	H/H,A/A	rs139840343	1.0	.	0.0599	0.005	0.915	549	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=A;DP=96;GAnc=A;GRP=0.0599;HRun;MQ=38.81;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=549;mSC=0.005;pSC=0.915	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:65:99:0,196,2590:0,0:0,0:0,0:39,25:0:38.81:0;1/1:31:93.30:1230,93,0:21,10:0,0:0,0:0,0:0:37.00:0	+
4_74904043_C/T	4	74904043	T	ENSG00000163734	ENST00000296026	Transcript	NON_SYNONYMOUS_CODING	266	188	63	K/R	aAg/aGg	-	ENSP=ENSP00000296026;PolyPhen=benign(0);SIFT=tolerated(0.26);HGNC=CXCL3	C	T/T,C/C	T	-	T	A/A,H/H	.	1	.	-3.43	0.006	0.006	906	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=78;Dels=0.00;FS=0.000;GRP=-3.43;HRun=2;HaplotypeScore=0.0000;MQ=31.11;MQ0;Map20=1;OAnc=T;QD=31.66;TS=HPOM;TSseq=C,T,T,T;UR;bSC=906;mSC=0.006;pSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1648,147,0:0,0:0,0:0,0:22,29:0:31.11:1;0/0:27:81.22:0,81,1013:0,0:17,10:0,0:0,0:0:36.02:0	-
4_76489584_T/C	4	76489584	C	ENSG00000174792	ENST00000311623	Transcript	NON_SYNONYMOUS_CODING	363	328	110	H/Y	Cac/Tac	-	ENSP=ENSP00000311307;PolyPhen=benign(0);SIFT=tolerated(0.55);HGNC=C4orf26	T	T/T,C/C	C	C	C	H/H,A/A	rs115202810	1.0	.	-2.33	0.000	0.301	759	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=56;GAnc=C;GRP=-2.33;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=759;mSC=0.000;pSC=0.301	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:99:0,99,1306:0,0:0,0:0,0:10,22:0:37.00:0;1/1:23:69.22:910,69,0:0,0:9,14:0,0:0,0:0:37.00:0	+
4_77296745_G/T	4	77296745	T	ENSG00000163749	ENST00000434846	Transcript	NON_SYNONYMOUS_CODING	1313	1142	381	H/P	cAt/cCt	-	ENSP=ENSP00000401742;PolyPhen=unknown(0);SIFT=tolerated(0.44);HGNC=CCDC158	G	T/T,T/T	T	T	T	A/A,A/A	rs7685091	0.96	.	4.11	0.124	0.146	501	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;BaseQRankSum=-0.983;CAnc=T;DP=118;Dels=0.00;FS=3.779;GAnc=T;GRP=4.11;HRun=0;HaplotypeScore=1.9891;MQ=37.00;MQ0=0;MQRankSum=-1.030;Map20=1;OAnc=T;QD=36.58;ReadPosRankSum=1.685;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=501;mSC=0.124;pSC=0.146	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:76:99:2813,183,0:0,0:0,0:0,1:45,30:0:37.00:0;1/1:42:99:1644,126,0:0,0:0,0:0,0:21,21:0:37.00:0	-
4_77324343_C/A	4	77324343	A	ENSG00000163749	ENST00000318586	Transcript	NON_SYNONYMOUS_CODING	171	18	6	C/W	tgT/tgG	-	ENSP=ENSP00000316815;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=CCDC158	C	A/A,A/A	A	A	A	A/A,A/A	rs28580836	0.96	.	4.06	0.996	0.580	537	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;BaseQRankSum=-1.347;CAnc=A;DP=109;Dels=0.00;FS=0.000;GAnc=A;GRP=4.06;HRun=0;HaplotypeScore=0.9665;MQ=38.31;MQ0=0;MQRankSum=1.017;Map20=1;OAnc=A;QD=34.68;ReadPosRankSum=1.622;TS=HPGOMC;TSseq=C,A,A,A,A,A;bSC=537;mSC=0.996;pSC=0.580	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2391,150,0:14,51:0,1:0,0:0,0:0:38.31:0;1/1:41:99:1623,123,0:16,25:0,0:0,0:0,0:0:37.00:0	-
4_88767191_G/A	4	88767191	A	ENSG00000152595	ENST00000361056	Transcript	NON_SYNONYMOUS_CODING	1211	1171	391	T/A	Act/Gct	-	ENSP=ENSP00000354341;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=MEPE	G	A/A,G/G	A	A	A	A/A,H/H	rs79592550	0.99	.	-0.0689	0.000	0.910	809	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AN=4;BaseQRankSum=-0.558;CAnc=A;DP=91;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.0689;HRun;HaplotypeScore=0.0000;MQ=37.95;MQ0=0;MQRankSum=0.910;Map20=1;OAnc=A;QD=36.75;ReadPosRankSum=1.028;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=809;mSC=0.000;pSC=0.910	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2201,135,0:44,14:0,0:1,0:0,0:0:37.95:0;0/0:32:96.31:0,96,1269:0,0:0,0:22,10:0,0:0:37.00:0	+
4_88767366_A/C	4	88767366	C	ENSG00000152595	ENST00000361056	Transcript	NON_SYNONYMOUS_CODING	1386	1346	449	T/N	aCc/aAc	-	ENSP=ENSP00000354341;PolyPhen=benign(0.01);SIFT=tolerated(0.23);HGNC=MEPE	A	C/C,C/C	C	C	C	A/A,A/A	rs61731017	0.99	.	-1.22	0.007	0.217	809	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AN=4;BaseQRankSum=1.448;CAnc=C;DP=99;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.22;HRun;HaplotypeScore=1.9995;MQ=37.49;MQ0=0;MQRankSum=1.051;Map20=1;OAnc=C;QD=37.71;ReadPosRankSum=-0.426;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=809;mSC=0.007;pSC=0.217	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2334,144,0:0,1:29,30:0,0:0,0:0:37.49:0;1/1:38:99:1480,114,0:0,0:23,15:0,0:0,0:0:37.00:0	+
4_88767481_A/C	4	88767481	C	ENSG00000152595	ENST00000361056	Transcript	NON_SYNONYMOUS_CODING	1501	1461	487	H/Q	caC/caA	-	ENSP=ENSP00000354341;PolyPhen=benign(0.015);SIFT=tolerated(0.15);HGNC=MEPE	A	C/C,C/C	C	C	C	A/A,A/A	rs61731016	0.99	CpG	-6.21	0.000	0.005	809	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AN=4;CAnc=C;CpG;DP=61;Dels=0.00;FS=0.000;GAnc=C;GRP=-6.21;HRun=0;HaplotypeScore=0.0000;MQ=39.20;MQ0=0;Map20=1;OAnc=C;QD=37.62;TS=HPGOMC;TSseq=A,C,T,C,T,A;bSC=809;mSC=0.000;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1538,117,0:0,0:18,21:0,0:1,0:0:39.20:0;1/1:21:60.19:792,60,0:0,0:5,15:0,0:1,0:0:37.00:0	+
4_89408223_G/A	4	89408223	A	ENSG00000138646	ENST00000264350	Transcript	NON_SYNONYMOUS_CODING	2008	1855	619	T/A	Act/Gct	-	ENSP=ENSP00000264350;PolyPhen=benign(0);SIFT=tolerated(0.73);HGNC=HERC5	G	A/A,A/A	A	A	-	A/A,A/A	.	1	CpG	-1.33	0.001	0.364	809	1	AC=4;AF=1.00;AN=4;CAnc=A;CpG;DP=88;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.33;HRun=0;HaplotypeScore=1.9995;MQ=37.55;MQ0=0;Map20=1;QD=38.53;TS=HPGMC;TSseq=G,A,A,A,A;UR;bSC=809;mSC=0.001;pSC=0.364	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2113,160,0:33,21:0,0:0,0:0,0:0:37.55:0;1/1:34:99:1343,102,0:14,20:0,0:0,0:0,0:0:37.00:0	+
4_89410317_A/G	4	89410317	G	ENSG00000138646	ENST00000264350	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2116	1963	655	G/S	Ggt/Agt	-	ENSP=ENSP00000264350;PolyPhen=benign(0);SIFT=tolerated(0.46);HGNC=HERC5	A	G/G,G/G	G	G	-	A/A,A/A	.	1	.	2.17	0.001	0.142	814	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=94;Dels=0.00;FS=0.000;GAnc=G;GRP=2.17;HRun;HaplotypeScore=1.9995;MQ=38.33;MQ0=0;Map20=1;QD=38.16;TS=HPGMC;TSseq=A,G,G,N,G;UR;bSC=814;mSC=0.001;pSC=0.142	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:67:99:2590,199,0:0,0:1,0:34,31:0,0:0:38.33:0;1/1:27:78.26:1040,78,0:0,0:0,0:10,17:0,0:0:37.00:0	+
4_90169025_C/T	4	90169025	T	ENSG00000185477	ENST00000333209	Transcript	NON_SYNONYMOUS_CODING	2756	2237	746	K/R	aAa/aGa	-	ENSP=ENSP00000328672;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GPRIN3	C	T/T,T/T	T	T	T	A/A,A/A	rs17015286	0.95	.	5.26	1.000	0.975	739	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.22;AMR_AF=0.01;AN=4;CAnc=T;DP=71;Dels=0.00;FS=0.000;GAnc=T;GRP=5.26;HRun;HaplotypeScore=0.0000;MQ=37.52;MQ0=0;Map20=1;OAnc=T;QD=35.97;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=739;mSC=1.000;pSC=0.975	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1795,138,0:0,0:0,0:0,0:26,21:0:37.52:0;1/1:22:66.22:876,66,0:0,0:0,0:0,0:10,12:0:37.00:0	-
4_100573302_A/G	4	100573302	G	ENSG00000248713	ENST00000511828	Transcript	NON_SYNONYMOUS_CODING	2504	2504	835	T/M	aCg/aTg	-	ENSP=ENSP00000427555;PolyPhen=benign(0);SIFT=tolerated(1)	A	G/A,A/A	G	G	G	A/H,H/H	rs115292032	0.96	CpG	-0.652	0.039	0.630	620	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.04;AFR_AF=0.13;AMR_AF=0.03;AN=4;BaseQRankSum=1.691;CAnc=G;CpG;DP=63;Dels=0.00;EUR_AF=0.03;FS=7.143;GAnc=G;GRP=-0.652;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.234;Map20=1;OAnc=G;QD=14.28;ReadPosRankSum=-2.971;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=620;mSC=0.039;pSC=0.630	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:37:99:558,0,678:6,14:0,0:9,8:0,0:0:37.00:0;0/0:26:78.26:0,78,1036:14,12:0,0:0,0:0,0:0:37.00:0	-
4_129143534_A/G	4	129143534	G	ENSG00000138709	ENST00000354456	Transcript	NON_SYNONYMOUS_CODING	2709	835	279	V/I	Gta/Ata	-	ENSP=ENSP00000346444;PolyPhen=benign(0);HGNC=LARP1B	A	G/G,G/G	G	G	G	A/A,A/A	rs74738254	0.95	CpG	-3.74	0.000	0.025	560	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.02;AMR_AF=0.05;AN=4;ASN_AF=0.11;BaseQRankSum=1.669;CAnc=G;CpG;DP=92;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=-3.74;HRun=0;HaplotypeScore=0.9973;MQ=39.13;MQ0=0;MQRankSum=-1.543;Map20=1;OAnc=G;QD=37.12;ReadPosRankSum=-0.409;TS=HPGOMC;TSseq=A,G,G,T,-,-;UR;bSC=560;mSC=0.000;pSC=0.025	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2075,134,0:1,0:0,0:31,22:0,0:0:39.13:0;1/1:37:99:1466,111,0:0,0:0,0:15,22:0,0:0:37.00:0	+
4_141489068_C/T	4	141489068	T	ENSG00000109424	ENST00000262999	Transcript	NON_SYNONYMOUS_CODING	266	190	64	T/A	Act/Gct	-	ENSP=ENSP00000262999;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=UCP1	C	T/T,T/T	T	T	T	A/A,A/A	rs45539933	0.91	CpG	5.51	0.141	0.169	757	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.10;AMR_AF=0.09;AN=4;ASN_AF=0.08;BaseQRankSum=0.866;CAnc=T;CpG;DP=68;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=T;GRP=5.51;HRun=0;HaplotypeScore=2.9992;MQ=38.55;MQ0=0;MQRankSum=-1.444;Map20=1;OAnc=T;QD=34.58;ReadPosRankSum=-1.636;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=757;mSC=0.141;pSC=0.169	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:68.34:1347,68,0:0,0:0,1:0,0:17,20:0:38.55:0;1/1:30:90.30:1200,90,0:0,0:0,0:0,0:17,13:0:37.00:0	-
4_159631800_C/T	4	159631800	T	ENSG00000171497	ENST00000307720	Transcript	NON_SYNONYMOUS_CODING	1112	1004	335	E/G	gAg/gGg	-	ENSP=ENSP00000303754;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=PPID	C	T/T,C/C	T	T	T	A/A,H/H	rs17843956	0.98	.	5.45	1.000	0.868	640	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=T;DP=81;Dels=0.00;FS=0.000;GAnc=T;GRP=5.45;HRun=0;HaplotypeScore=0.0000;MQ=38.26;MQ0=0;Map20=1;OAnc=T;QD=36.94;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=640;mSC=1.000;pSC=0.868	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1769,135,0:0,0:0,0:0,0:25,22:0:38.26:0;0/0:34:99:0,102,1357:0,0:20,14:0,0:0,0:0:37.00:0	-
4_184186853_G/T	4	184186853	T	ENSG00000151718	ENST00000378925	Transcript	NON_SYNONYMOUS_CODING	2234	1758	586	I/M	atT/atG	-	ENSP=ENSP00000368205;PolyPhen=benign(0);SIFT=tolerated(0.38);HGNC=WWC2	G	G/G,T/T	T	T	T	H/H,A/A	.	1	.	-10.7	0.000	0.907	837	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=84;GAnc=T;GRP=-10.7;HRun;MQ=38.55;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=G,T,T,T,T,T;UR;bSC=837;mSC=0.000;pSC=0.907	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:99:0,172,2235:0,0:0,0:35,22:0,0:0:38.55:0;1/1:27:81.26:1058,81,0:0,0:0,0:0,0:14,13:0:37.00:0	+
4_187086562_C/A	4	187086562	A	ENSG00000109794	ENST00000227065	Transcript	NON_SYNONYMOUS_CODING	1687	1108	370	I/L	Ata/Cta	-	ENSP=ENSP00000227065;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAM149A	C	C/C,A/C	A	A	A	H/H,A/H	rs61155675	0.94	.	5.55	0.822	0.011	828	1	1000gALT=A;AC=1;AF=0.25;AF1000g=0.06;AFR_AF=0.10;AMR_AF=0.07;AN=4;ASN_AF=0.02;CAnc=A;DP=61;EUR_AF=0.05;GAnc=A;GRP=5.55;HRun=0;MQ=40.05;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=C,A,A,A,A,A;bSC=828;mSC=0.822;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,114,1491:0,0:25,12:0,0:0,0:0:40.05:0;0/1:23:99:489,0,248:6,9:2,6:0,0:0,0:0:37.00:0	+
4_187540635_T/G	4	187540635	G	ENSG00000083857	ENST00000260147	Transcript	NON_SYNONYMOUS_CODING	7299	7111	2371	P/T	Ccg/Acg	-	ENSP=ENSP00000260147;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAT1	T	G/G,T/T	G	G	G	A/A,H/H	rs77834784	0.91	.	1.24	0.001	0.021	371	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.01;AMR_AF=0.11;AN=4;ASN_AF=0.20;CAnc=G;DP=71;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=1.24;HRun=3;HaplotypeScore=1.9955;MQ=39.49;MQ0=0;Map20=1;OAnc=G;QD=36.68;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=371;mSC=0.001;pSC=0.021	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1610,126,0:0,0:0,0:21,22:0,0:0:39.49:0;0/0:28:84.28:0,84,1119:0,0:0,0:0,0:18,10:0:37.00:0	-
4_187540918_G/C	4	187540918	C	ENSG00000083857	ENST00000260147	Transcript	NON_SYNONYMOUS_CODING	7016	6828	2276	E/D	gaG/gaC	-	ENSP=ENSP00000260147;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=FAT1	G	C/C,G/G	C	C	C	A/A,H/H	rs3796648	0.91	CpG	-1.29	0.085	0.063	371	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.01;AMR_AF=0.11;AN=4;ASN_AF=0.20;CAnc=C;CpG;DP=70;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-1.29;HRun;HaplotypeScore=0.0000;MQ=39.29;MQ0=0;Map20=1;OAnc=C;QD=38.83;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=371;mSC=0.085;pSC=0.063	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:2013,153,0:0,0:24,27:0,0:0,0:0:39.29:0;0/0:19:57.18:0,57,743:0,0:0,0:8,11:0,0:0:37.00:0	-
5_3610452_A/T	5	3610452	T	ENSG00000259491	ENST00000559599	Transcript	STOP_LOST	1354	136	46	*/R	Tga/Aga	-	ENSP=ENSP00000452979	A	T/T,A/A	T	T	T	A/A,H/H	rs13183610	0.97	.	-5.76	0.000	0.002	994	0.333333	1000gALT=T;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.02;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=1.200;CAnc=T;DP=66;Dels=0.02;EUR_AF=0.06;FS=0.000;GAnc=T;GRP=-5.76;HRun=0;HaplotypeScore=7.9171;MQ=36.46;MQ0=0;MQRankSum=1.644;Map20=0.333333;OAnc=T;QD=35.46;ReadPosRankSum=1.644;TS=HPGGOMC;TSseq=A,T,T,T,T,T,T,A;bSC=994;mSC=0.000;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:89.68:1452,90,0:1,0:0,0:0,0:20,18:0:36.46:0;0/0:26:38.24:0,38,942:9,16:0,0:0,0:0,1:0:37.00:0	+
5_33527307_A/G	5	33527307	G	ENSG00000151388	ENST00000352040	Transcript	NON_SYNONYMOUS_CODING	4601	4516	1506	P/S	Cca/Tca	-	ENSP=ENSP00000344847;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=ADAMTS12	A	G/G,A/A	G	G	G	A/A,H/H	rs16891281	0.93	.	-0.14	0.006	0.361	902	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.28;AMR_AF=0.03;AN=4;CAnc=G;DP=77;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.14;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=39.24;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=902;mSC=0.006;pSC=0.361	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1956,147,0:0,0:0,0:20,28:0,0:0:37.00:0;0/0:28:84.27:0,84,1108:10,18:0,0:0,0:0,0:0:37.00:0	-
5_39331786_T/C	5	39331786	C	ENSG00000113600	ENST00000263408	Transcript	NON_SYNONYMOUS_CODING	703	607	203	V/I	Gtc/Atc	-	ENSP=ENSP00000263408;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=C9	T	T/T,C/C	C	C	C	H/H,A/A	rs13361416	0.97	.	-2.92	0.002	0.354	744	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=C;DP=90;GAnc=C;GRP=-2.92;HRun;MQ=37.55;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,T,T;UR;bSC=744;mSC=0.002;pSC=0.354	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:54:99:0,153,2020:0,0:0,0:0,0:34,20:0:37.55:0;1/1:36:99:1434,108,0:0,0:19,17:0,0:0,0:0:37.00:0	-
5_41159339_C/G	5	41159339	G	ENSG00000039537	ENST00000263413	Transcript	NON_SYNONYMOUS_CODING	1966	1701	567	H/Q	caC/caG	-	ENSP=ENSP00000263413;PolyPhen=benign(0);SIFT=tolerated(0.59);HGNC=C6	C	G/C,C/C	G	G	G	A/H,H/H	rs80108105	0.99	.	1.51	0.999	0.922	430	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.01;AN=4;ASN_AF=0.03;BaseQRankSum=2.414;CAnc=G;DP=85;Dels=0.00;FS=0.000;GAnc=G;GRP=1.51;HRun=0;HaplotypeScore=0.9997;MQ=38.21;MQ0=0;MQRankSum=-0.515;Map20=1;OAnc=G;QD=13.52;ReadPosRankSum=-0.152;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=430;mSC=0.999;pSC=0.922	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:49:99:693,0,957:0,0:16,12:12,9:0,0:0:38.21:0;0/0:35:99:0,102,1342:0,1:21,13:0,0:0,0:0:37.00:0	-
5_54585213_C/T	5	54585213	T	ENSG00000067248	ENST00000251636	Transcript	NON_SYNONYMOUS_CODING	1100	951	317	I/M	atA/atG	-	ENSP=ENSP00000251636;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DHX29	C	T/T,T/T	T	T	T	A/A,A/A	rs112028693	1.0	.	0.757	0.996	0.954	248	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=0.852;CAnc=T;DP=107;Dels=0.00;FS=0.000;GAnc=T;GRP=0.757;HRun=2;HaplotypeScore=2.7330;MQ=39.80;MQ0=5;MQRankSum=-0.192;Map20=1;OAnc=T;QD=35.29;ReadPosRankSum=0.742;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=248;mSC=0.996;pSC=0.954	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2327,153,0:0,0:0,1:0,0:25,39:0:39.80:1;1/1:42:99:1496,114,0:0,0:0,0:0,0:28,14:0:34.91:4	-
5_65118738_C/T	5	65118738	T	ENSG00000123213	ENST00000380985	Transcript	NON_SYNONYMOUS_CODING	2288	2110	704	S/P	Tcg/Ccg	-	ENSP=ENSP00000370372;PolyPhen=probably_damaging(0.904);SIFT=deleterious(0);HGNC=NLN	C	T/T,T/T	T	T	T	A/A,A/A	rs6860508	0.93	.	-0.749	0.384	0.764	608	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.21;AMR_AF=0.07;AN=4;BaseQRankSum=0.606;CAnc=T;DP=73;Dels=0.00;EUR_AF=0.03;FS=3.468;GAnc=T;GRP=-0.749;HRun;HaplotypeScore=0.9997;MQ=39.14;MQ0=0;MQRankSum=-0.606;Map20=1;OAnc=T;QD=35.83;ReadPosRankSum=1.646;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=608;mSC=0.384;pSC=0.764	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:80.38:1502,80,0:0,0:0,1:0,0:23,16:0:39.14:0;1/1:32:96.31:1268,96,0:0,0:0,0:0,0:15,17:0:37.00:0	+
5_66460630_T/C	5	66460630	C	ENSG00000069020	ENST00000261569	Transcript	NON_SYNONYMOUS_CODING	5415	5041	1681	R/W	Cgg/Tgg	-	ENSP=ENSP00000261569;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MAST4	T	C/C,C/C	C	C	C	A/A,A/A	rs55970008	0.95	CpG	4	0.992	0.527	471	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.16;AMR_AF=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=1.213;CAnc=C;CpG;DP=59;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=4;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=1.559;Map20=1;OAnc=C;QD=35.73;ReadPosRankSum=-1.473;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=471;mSC=0.992;pSC=0.527	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:80.35:1462,80,0:0,0:18,20:0,0:1,0:0:37.00:0;1/1:19:57.18:734,57,0:0,0:9,10:0,0:0,0:0:37.00:0	+
5_71638807_G/A	5	71638807	A	ENSG00000049883	ENST00000380639	Transcript	NON_SYNONYMOUS_CODING	788	772	258	M/V	Atg/Gtg	-	ENSP=ENSP00000370013;PolyPhen=benign(0.001);SIFT=tolerated(0.14);HGNC=PTCD2	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	-7.6	0.001	0.467	439	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=102;Dels=0.00;FS=0.000;GAnc=A;GRP=-7.6;HRun=0;HaplotypeScore=0.0000;MQ=38.49;MQ0=2;Map20=1;OAnc=A;QD=36.80;TS=HPGOMC;TSseq=G,A,A,A,G,A;UR;bSC=439;mSC=0.001;pSC=0.467	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:72:99:2683,208,0:40,32:0,0:0,0:0,0:0:38.49:1;1/1:30:87.28:1141,87,0:14,16:0,0:0,0:0,0:0:36.38:1	+
5_74959274_G/A	5	74959274	A	ENSG00000189045	ENST00000504514	Transcript	NON_SYNONYMOUS_CODING	949	950	317	D/G	gAc/gGc	-	ENSP=ENSP00000433672;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=ANKDD1B	G	A/A,G/G	A	A	A	A/A,H/H	.	1	.	3.9	1.000	0.945	617	1	AC=2;AF=0.50;AN=4;BaseQRankSum=0.306;CAnc=A;DP=52;Dels=0.00;FS=5.315;GAnc=A;GRP=3.9;HRun=0;HaplotypeScore=1.9662;MQ=37.88;MQ0=0;MQRankSum=1.631;Map20=1;OAnc=A;QD=36.43;ReadPosRankSum=0.510;TS=HPGOMC;TSseq=G,A,-,A,A,A;UR;bSC=617;mSC=1.000;pSC=0.945	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:62.33:1272,62,0:24,9:0,0:0,1:0,0:0:37.88:0;0/0:18:54.16:0,54,695:0,0:0,0:10,8:0,0:0:37.00:0	+
5_75591644_C/A	5	75591644	A	ENSG00000122012	ENST00000322285	Transcript	NON_SYNONYMOUS_CODING	1579	1379	460	H/P	cAt/cCt	-	ENSP=ENSP00000316983;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SV2C	C	A/A,A/A	A	A	-	A/A,A/A	.	1	.	5.87	1.000	0.901	880	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.663;CAnc=A;DP=90;Dels=0.00;FS=0.000;GAnc=A;GRP=5.87;HRun=0;HaplotypeScore=0.9997;MQ=38.73;MQ0=0;MQRankSum=-1.455;Map20=1;QD=36.39;ReadPosRankSum=1.039;TS=HPGMC;TSseq=C,A,A,A,A;bSC=880;mSC=1.000;pSC=0.901	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1889,120,0:21,29:0,1:0,0:0,0:0:38.73:0;1/1:39:99:1551,117,0:18,21:0,0:0,0:0,0:0:37.00:0	+
5_82833977_A/T	5	82833977	T	ENSG00000038427	ENST00000265077	Transcript	NON_SYNONYMOUS_CODING	5720	5155	1719	S/T	Tct/Act	-	ENSP=ENSP00000265077;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=VCAN	A	T/T,T/T	T	T	T	A/A,A/A	rs113965318	0.99	.	-2.61	0.000	0.111	390	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;CAnc=T;DP=77;Dels=0.00;FS=0.000;GAnc=T;GRP=-2.61;HRun=0;HaplotypeScore=0.0000;MQ=38.04;MQ0=0;Map20=1;OAnc=T;QD=37.64;TS=HPGOMC;TSseq=A,T,T,T,T,T;UR;bSC=390;mSC=0.000;pSC=0.111	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2179,166,0:0,1:0,0:0,0:32,24:0:38.04:0;1/1:20:60.20:793,60,0:0,0:0,0:0,0:12,8:0:37.00:0	+
5_82834398_C/A	5	82834398	A	ENSG00000038427	ENST00000265077	Transcript	NON_SYNONYMOUS_CODING	6141	5576	1859	E/A	gAa/gCa	-	ENSP=ENSP00000265077;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=VCAN	C	A/A,A/A	A	A	A	A/A,A/A	rs34050047	0.99	.	0.772	0.088	0.433	389	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;BaseQRankSum=0.472;CAnc=A;DP=95;Dels=0.00;FS=3.979;GAnc=A;GRP=0.772;HRun=2;HaplotypeScore=0.9997;MQ=38.04;MQ0=0;MQRankSum=-1.543;Map20=1;OAnc=A;QD=36.17;ReadPosRankSum=0.346;TS=HPGOMC;TSseq=C,A,A,A,A,A;UR;bSC=389;mSC=0.088;pSC=0.433	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2095,126,0:33,23:0,1:0,0:0,0:0:38.04:0;1/1:38:99:1500,114,0:17,21:0,0:0,0:0,0:0:37.00:0	+
5_82837946_G/A	5	82837946	A	ENSG00000038427	ENST00000265077	Transcript	NON_SYNONYMOUS_CODING	9689	9124	3042	N/D	Aat/Gat	-	ENSP=ENSP00000265077;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=VCAN	G	A/A,A/A	A	A	A	A/A,A/A	.	1.0	.	4.55	0.509	0.466	385	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.846;CAnc=A;DP=72;Dels=0.00;FS=0.000;GAnc=A;GRP=4.55;HRun;HaplotypeScore=1.9995;MQ=38.21;MQ0=0;MQRankSum=1.846;Map20=1;OAnc=A;QD=35.53;ReadPosRankSum=-1.664;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=385;mSC=0.509;pSC=0.466	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:53.77:1490,54,0:31,8:0,0:1,0:0,0:0:38.21:0;1/1:31:93.29:1216,93,0:16,15:0,0:0,0:0,0:0:37.00:0	+
5_86564477_A/G	5	86564477	G	ENSG00000145715	ENST00000274376	Transcript	NON_SYNONYMOUS_CODING	773	209	70	G/E	gGg/gAg	-	ENSP=ENSP00000274376;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RASA1	A	G/G,G/G	G	G	G	A/A,A/A	.	1.0	.	2.38	0.956	0.879	653	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=G;DP=46;Dels=0.00;FS=0.000;GAnc=G;GRP=2.38;HRun;HaplotypeScore=0.9665;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.25;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=653;mSC=0.956;pSC=0.879	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.28:1142,87,0:0,0:0,0:13,16:0,0:0:37.00:0;1/1:17:51.16:661,51,0:0,0:0,0:9,8:0,0:0:37.00:0	+
5_86688123_G/A	5	86688123	A	ENSG00000145715	ENST00000534133	Transcript	NON_SYNONYMOUS_CODING	2679	2591	864	N/S	aAt/aGt	-	ENSP=ENSP00000433186;PolyPhen=benign(0);SIFT=tolerated(0.88);HGNC=RASA1	G	A/A,A/A	A	A	A	A/A,A/A	rs6879293	0.94	.	-3.79	0.000	0.177	529	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.21;AMR_AF=0.04;AN=4;ASN_AF=0.01;CAnc=A;DP=67;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=-3.79;HRun;HaplotypeScore=0.0000;MQ=38.41;MQ0=0;Map20=1;OAnc=A;QD=36.47;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=529;mSC=0.000;pSC=0.177	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1565,120,0:17,25:0,0:0,0:0,0:0:38.41:0;1/1:25:75.24:991,75,0:13,12:0,0:0,0:0,0:0:37.45:0	+
5_90103487_T/C	5	90103487	C	ENSG00000164199	ENST00000296619	Transcript	NON_SYNONYMOUS_CODING	14905	14905	4969	R/W	Cgg/Tgg	-	ENSP=ENSP00000296619;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GPR98	T	T/T,C/C	C	C	C	H/H,A/A	rs7729495	0.94	CpG	4.84	0.016	0.136	368	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.24;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=68;GAnc=C;GRP=4.84;HRun=0;MQ=37.75;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=368;mSC=0.016;pSC=0.136	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:99:0,117,1540:0,0:0,0:0,0:17,23:0:37.75:0;1/1:28:84.24:1082,84,0:0,0:11,17:0,0:0,0:0:37.00:0	+
5_118485238_G/C	5	118485238	C	ENSG00000172869	ENST00000311085	Transcript	NON_SYNONYMOUS_CODING	3796	3716	1239	S/C	tCc/tGc	-	ENSP=ENSP00000309690;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DMXL1	G	C/C,C/C	C	C	C	A/A,A/A	rs112912947	0.98	.	5.39	1.000	0.983	429	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=0.685;CAnc=C;DP=73;Dels=0.00;FS=0.000;GAnc=C;GRP=5.39;HRun=2;HaplotypeScore=0.0000;MQ=38.31;MQ0=0;MQRankSum=0.846;Map20=1;OAnc=C;QD=36.92;ReadPosRankSum=0.524;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=429;mSC=1.000;pSC=0.983	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.41:1620,89,0:0,0:23,19:1,0:0,0:0:38.31:0;1/1:30:90.29:1172,90,0:0,0:16,14:0,0:0,0:0:37.00:0	+
5_121356189_T/A	5	121356189	A	ENSG00000151304	ENST00000339397	Transcript	NON_SYNONYMOUS_CODING	831	759	253	L/F	ttA/ttT	-	ENSP=ENSP00000341324;PolyPhen=benign(0);SIFT=tolerated(0.66);HGNC=SRFBP1	T	A/A,A/A	A	A	A	A/A,A/A	rs61734326	0.93	RM	-2.51	0.000	0.176	751	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.15;AMR_AF=0.06;AN=4;ASN_AF=0.05;BaseQRankSum=0.700;CAnc=A;DP=76;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=-2.51;HRun=0;HaplotypeScore=1.9995;MQ=38.26;MQ0=0;MQRankSum=0.700;Map20=1;OAnc=A;QD=37.09;RM;ReadPosRankSum=-0.258;TS=HPGOMC;TSseq=T,A,A,A,A,A;UR;bSC=751;mSC=0.000;pSC=0.176	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1776,101,0:27,19:0,0:0,0:1,0:0:38.26:0;1/1:29:87.28:1154,87,0:15,14:0,0:0,0:0,0:0:37.00:0	+
5_122364538_T/C	5	122364538	C	ENSG00000168938	ENST00000306442	Transcript	NON_SYNONYMOUS_CODING	373	257	86	R/K	aGg/aAg	-	ENSP=ENSP00000303057;PolyPhen=benign(0.014);SIFT=tolerated(0.2);HGNC=PPIC	T	C/C,C/C	C	C	C	A/A,A/A	rs34341374	0.97	.	-10.4	0.007	0.815	661	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.04;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=1.547;CAnc=C;DP=86;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=-10.4;HRun;HaplotypeScore=1.9905;MQ=40.10;MQ0=0;MQRankSum=-1.485;Map20=1;OAnc=C;QD=36.87;ReadPosRankSum=-1.361;TS=HPGOMC;TSseq=T,C,C,C,T,G;UR;bSC=661;mSC=0.007;pSC=0.815	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2098,139,0:0,0:25,29:0,0:0,1:0:40.10:0;1/1:30:90.29:1189,90,0:0,0:16,14:0,0:0,0:0:37.00:0	-
5_132090183_G/A	5	132090183	A	ENSG00000164402	ENST00000378721	Transcript	NON_SYNONYMOUS_CODING	1411	1310	437	L/P	cTa/cCa	-	ENSP=ENSP00000367993;PolyPhen=benign(0.001);SIFT=tolerated(0.15);HGNC=SEPT8	G	A/A,G/G	A	A	A	A/A,H/H	rs112739008	1.0	.	-2.43	0.000	0.028	335	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-0.139;CAnc=A;DP=89;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.43;HRun=0;HaplotypeScore=0.0000;MQ=38.73;MQ0=0;MQRankSum=0.693;Map20=1;OAnc=A;QD=36.85;ReadPosRankSum=1.109;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=335;mSC=0.000;pSC=0.028	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1912,110,0:24,26:0,0:1,0:0,0:0:38.73:0;0/0:38:99:0,114,1495:0,0:0,0:24,14:0,0:0:37.00:0	-
5_134782596_T/G	5	134782596	G	ENSG00000251380	ENST00000503143	Transcript	NON_SYNONYMOUS_CODING	443	203	68	S/Y	tCc/tAc	-	ENSP=ENSP00000421871;PolyPhen=unknown(0);HGNC=C5orf20	T	T/T,G/G	G	G	G	H/H,A/A	.	1	.	-0.663	0.000	0.002	777	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=53;GAnc=G;GRP=-0.663;HRun=3;MQ=39.37;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=T,G,G,G,G,A;UR;bSC=777;mSC=0.000;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,108,1404:0,0:0,0:0,0:18,18:0:39.37:0;1/1:16:48.13:607,48,0:0,0:0,0:9,7:0,0:0:37.00:0	-
5_134782689_A/G	5	134782689	G	ENSG00000251380	ENST00000503143	Transcript	NON_SYNONYMOUS_CODING	350	110	37	S/F	tCc/tTc	-	ENSP=ENSP00000421871;PolyPhen=unknown(0);HGNC=C5orf20	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	0.132	0.000	0.242	772	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=67;GAnc=G;GRP=0.132;HRun=3;MQ=38.88;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=772;mSC=0.000;pSC=0.242	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,141,1822:22,24:0,0:0,0:0,0:0:38.88:0;1/1:20:60.18:777,60,0:0,0:0,0:7,13:0,0:0:37.00:0	-
5_138456729_T/C	5	138456729	C	ENSG00000120725	ENST00000265195	Transcript	NON_SYNONYMOUS_CODING	385	239	80	R/Q	cGg/cAg	-	ENSP=ENSP00000265195;PolyPhen=benign(0.001);SIFT=tolerated(0.6);HGNC=SIL1	T	C/C,T/T	C	C	C	A/A,H/H	rs35581768	0.99	CpG	-2.55	0.069	0.325	364	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AN=4;BaseQRankSum=0.346;CAnc=C;CpG;DP=65;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.55;HRun;HaplotypeScore=3.8909;MQ=37.00;MQ0=0;MQRankSum=1.193;Map20=1;OAnc=C;QD=37.03;ReadPosRankSum=-1.270;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=364;mSC=0.069;pSC=0.325	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:95.43:1699,95,0:0,0:24,20:0,0:1,0:0:37.00:0;0/0:20:57.19:0,57,751:0,0:0,0:0,0:14,6:0:37.00:0	-
5_138715520_T/C	5	138715520	C	ENSG00000170482	ENST00000348729	Transcript	NON_SYNONYMOUS_CODING	819	772	258	V/M	Gtg/Atg	-	ENSP=ENSP00000302701;PolyPhen=benign(0);SIFT=tolerated(0.22);HGNC=SLC23A1	T	C/C,C/C	C	C	C	A/A,A/A	rs35817838	0.98	CpG	0.678	0.107	0.344	311	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AN=4;BaseQRankSum=1.067;CAnc=C;CpG;DP=61;Dels=0.00;FS=2.866;GAnc=C;GRP=0.678;HRun=0;HaplotypeScore=0.9997;MQ=39.05;MQ0=0;MQRankSum=-0.779;Map20=1;OAnc=C;QD=34.39;ReadPosRankSum=0.433;TS=HPGOMC;TSseq=T,C,C,C,C,T;bSC=311;mSC=0.107;pSC=0.344	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:49.38:1512,49,0:0,0:24,15:0,0:2,0:0:39.05:0;1/1:18:54.16:691,54,0:0,0:9,9:0,0:0,0:0:37.00:0	-
5_139197136_G/C	5	139197136	C	ENSG00000146005	ENST00000274710	Transcript	NON_SYNONYMOUS_CODING	1292	1087	363	R/G	Cga/Gga	-	ENSP=ENSP00000274710;PolyPhen=benign(0);SIFT=tolerated(0.95);HGNC=PSD2	G	C/C,C/C	C	C	C	A/A,A/A	rs35714177	0.97	CpG	.	.	.	642	.	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.15;AN=4;BaseQRankSum=1.059;CAnc=C;CpG;DP=62;Dels=0.00;FS=0.000;GAnc=C;HRun;HaplotypeScore=0.9997;MQ=37.83;MQ0=0;MQRankSum=-1.348;OAnc=C;QD=36.71;ReadPosRankSum=0.963;TS=HPGOMC;TSseq=G,-,C,C,C,C;UR;bSC=642	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:68.35:1355,68,0:0,0:16,18:0,1:0,0:0:37.83:0;1/1:26:78.25:1013,78,0:0,0:10,16:0,0:0,0:0:37.00:0	+
5_139508154_A/C	5	139508154	C	ENSG00000182700	ENST00000333305	Transcript	NON_SYNONYMOUS_CODING	2634	93	31	N/K	aaC/aaA	-	ENSP=ENSP00000327344;PolyPhen=benign(0);HGNC=IGIP	A	C/C,C/C	C	C	C	A/A,A/A	rs75647802	0.99	.	2.96	1.000	0.924	311	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;CAnc=C;DP=56;Dels=0.00;FS=0.000;GAnc=C;GRP=2.96;HRun=0;HaplotypeScore=0.0000;MQ=37.75;MQ0=0;Map20=1;OAnc=C;QD=37.87;TS=HPGOMC;TSseq=A,C,C,C,T,C;UR;bSC=311;mSC=1.000;pSC=0.924	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1548,117,0:0,0:22,17:0,0:0,1:0:37.75:0;1/1:16:48.15:630,48,0:0,0:8,8:0,0:0,0:0:37.00:0	+
5_140306489_T/G	5	140306489	G	ENSG00000248383	ENST00000253807	Transcript	NON_SYNONYMOUS_CODING	12	12	4	W/C	tgG/tgT	-	ENSP=ENSP00000253807;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PCDHAC1	T	G/T,T/T	G	G	-	A/H,H/H	rs150445810	0.99	.	3.71	0.578	0.654	125	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.01;AN=4;BaseQRankSum=-1.109;CAnc=G;DP=58;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=3.71;HRun=4;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.738;Map20=1;QD=15.92;ReadPosRankSum=0.315;TS=HPGMC;TSseq=T,G,G,G,G;bSC=125;mSC=0.578;pSC=0.654	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:37:99:635,0,523:0,0:0,0:9,10:8,9:0:37.00:0;0/0:20:60.19:0,60,781:0,0:0,0:0,0:9,11:0:36.49:0	+
5_140308664_T/G	5	140308664	G	ENSG00000248383	ENST00000253807	Transcript	NON_SYNONYMOUS_CODING	2187	2187	729	R/S	agG/agT	-	ENSP=ENSP00000253807;PolyPhen=benign(0.001);SIFT=tolerated(0.73);HGNC=PCDHAC1	T	G/T,T/T	G	G	G	A/H,H/H	rs76301676	0.99	.	4.18	0.027	0.935	125	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.01;AN=4;BaseQRankSum=1.922;CAnc=G;DP=72;Dels=0.00;EUR_AF=0.01;FS=1.154;GAnc=G;GRP=4.18;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.376;Map20=1;OAnc=G;QD=14.99;ReadPosRankSum=1.536;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=125;mSC=0.027;pSC=0.935	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:45:99:705,0,823:0,0:0,0:12,9:12,12:0:37.00:0;0/0:27:81.26:0,81,1063:0,0:0,0:0,0:15,12:0:37.00:0	+
5_175956273_A/G	5	175956273	G	ENSG00000146083	ENST00000506378	Transcript	NON_SYNONYMOUS_CODING	515	517	173	P/S	Cct/Tct	-	ENSP=ENSP00000425253;PolyPhen=benign(0);SIFT=tolerated(0.11);HGNC=RNF44	A	G/G,G/G	G	G	-	A/A,A/A	rs73804130	0.98	.	-2.06	0.000	0.130	662	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.03;AN=4;CAnc=G;DP=63;Dels=0.00;FS=0.000;GAnc=G;GRP=-2.06;HRun;HaplotypeScore=0.0000;MQ=36.77;MQ0=0;Map20=1;QD=37.81;TS=HPGM;TSseq=A,G,G,G;bSC=662;mSC=0.000;pSC=0.130	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1697,132,0:0,0:0,0:28,16:0,0:0:36.77:0;1/1:19:57.16:724,57,0:0,0:0,0:9,10:0,0:0:37.00:0	-
5_176721151_T/C	5	176721151	C	ENSG00000165671	ENST00000347982	Transcript	NON_SYNONYMOUS_CODING	6076	5975	1992	T/M	aCg/aTg	-	ENSP=ENSP00000343209;PolyPhen=benign(0);SIFT=tolerated(0.79);HGNC=NSD1	T	C/C,T/T	C	C	C	A/A,H/H	rs34165241	0.96	CpG	-2.03	0.013	0.961	359	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.08;AMR_AF=0.03;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=88;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-2.03;HRun=0;HaplotypeScore=0.9933;MQ=37.40;MQ0=0;Map20=1;OAnc=C;QD=37.84;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=359;mSC=0.013;pSC=0.961	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1925,147,0:0,0:29,20:1,0:0,0:0:37.40:0;0/0:38:99:0,114,1501:0,0:0,0:0,0:24,14:0:37.00:0	+
5_176799017_A/G	5	176799017	G	ENSG00000169220	ENST00000336477	Transcript	NON_SYNONYMOUS_CODING	1167	985	329	E/K	Gaa/Aaa	-	ENSP=ENSP00000336864;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RGS14	A	A/A,G/G	G	G	G	H/H,A/A	.	1	CpG	3.02	0.609	0.475	568	1	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=75;GAnc=G;GRP=3.02;HRun=0;MQ=37.55;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=568;mSC=0.609;pSC=0.475	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:54:99:0,157,2060:34,19:0,0:0,0:0,0:0:37.55:0;1/1:21:63.20:829,63,0:0,0:0,0:10,11:0,0:0:37.00:0	+
5_176931628_G/T	5	176931628	T	ENSG00000146094	ENST00000357198	Transcript	NON_SYNONYMOUS_CODING	852	847	283	N/H	Aac/Cac	-	ENSP=ENSP00000349727;PolyPhen=benign(0);SIFT=tolerated(0.26);HGNC=DOK3	G	G/G,T/G	T	T	T	H/H,A/H	.	1	.	2.68	0.000	0.148	.	1	AC=1;AF=0.25;AN=4;CAnc=T;DP=59;GAnc=T;GRP=2.68;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=G,T,T,T,C,C;mSC=0.000;pSC=0.148	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:99:0,117,1555:0,0:0,0:21,18:0,0:0:37.00:0;0/1:20:99:444,0,211:0,0:0,0:2,5:7,6:0:37.00:0	-
5_178410213_T/C	5	178410213	C	ENSG00000113262	ENST00000231188	Transcript	NON_SYNONYMOUS_CODING	2313	2134	712	V/M	Gtg/Atg	-	ENSP=ENSP00000231188;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GRM6	T	C/C,T/T	C	C	C	A/A,H/H	rs17078877	0.94	.	5.33	0.872	0.210	906	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.06;AMR_AF=0.03;AN=4;ASN_AF=0.15;CAnc=C;DP=64;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=5.33;HRun=4;HaplotypeScore=0.0000;MQ=37.38;MQ0=0;Map20=1;OAnc=C;QD=38.48;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=906;mSC=0.872;pSC=0.210	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1688,129,0:0,0:22,20:0,0:0,0:0:37.38:0;0/0:21:63.20:0,63,830:0,0:0,0:0,0:12,9:0:37.00:0	-
5_178506587_C/A	5	178506587	A	ENSG00000177932	ENST00000315475	Transcript	NON_SYNONYMOUS_CODING	1460	1154	385	K/T	aAa/aCa	-	ENSP=ENSP00000324064;PolyPhen=benign(0);SIFT=tolerated(0.74);HGNC=ZNF354C	C	A/A,C/C	A	A	A	A/A,H/H	.	1	RM	1.48	0.003	0.684	798	1	AC=2;AF=0.50;AN=4;BaseQRankSum=1.666;CAnc=A;DP=81;Dels=0.00;FS=0.000;GAnc=A;GRP=1.48;HRun;HaplotypeScore=0.9578;MQ=39.79;MQ0=0;MQRankSum=1.466;Map20=1;OAnc=A;QD=37.52;RM;ReadPosRankSum=1.532;TS=HPGOMC;TSseq=C,A,A,A,A,A;bSC=798;mSC=0.003;pSC=0.684	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1984,153,0:35,15:1,0:0,0:0,0:0:39.79:0;0/0:29:87.28:0,87,1147:0,0:13,16:0,0:0,0:0:37.00:0	+
5_180166461_C/G	5	180166461	G	ENSG00000174339	ENST00000307832	Transcript	NON_SYNONYMOUS_CODING	639	598	200	V/L	Gtg/Ctg	-	ENSP=ENSP00000312403;PolyPhen=possibly_damaging(0.796);SIFT=tolerated(0.06);HGNC=OR2Y1	G	C/C,C/C	C	C	C	A/A,A/A	rs10464105	0.93	.	0.535	0.001	.	940	1	1000gALT=G;AC=0;AF=0.00;AF1000g=0.93;AFR_AF=0.73;AMR_AF=0.98;AN=4;ASN_AF=1.00;CAnc=C;DP=71;EUR_AF=0.97;GAnc=C;GRP=0.535;MQ=39.14;MQ0=0;Map20=1;OAnc=C;TS=HPGOM;TSseq=C,C,C,C,C;bSC=940;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,123,1598:0,0:25,14:0,0:0,0:0:39.14:0;0/0:30:90.29:0,90,1184:0,0:13,17:0,0:0,0:0:37.00:0	-
5_180219838_C/T	5	180219838	T	ENSG00000131446	ENST00000307826	Transcript	NON_SYNONYMOUS_CODING	466	134	45	D/G	gAc/gGc	-	ENSP=ENSP00000311888;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=MGAT1	C	C/C,T/T	T	T	T	H/H,A/A	rs61743256	0.99	.	3.41	0.337	0.174	830	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=T;DP=47;GAnc=T;GRP=3.41;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=830;mSC=0.337;pSC=0.174	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:35:99:0,105,1395:0,0:20,15:0,0:0,0:0:37.00:0;1/1:12:33.11:440,33,0:0,0:0,0:0,0:7,5:0:37.00:0	-
6_3010298_A/G	6	3010298	G	ENSG00000124588	ENST00000338130	Transcript	NON_SYNONYMOUS_CODING	759	47	16	R/K	aGg/aAg	-	ENSP=ENSP00000337773;PolyPhen=benign(0.001);SIFT=tolerated(0.48);HGNC=NQO2	A	A/A,G/A	G	G	G	H/H,A/H	rs28383623	0.96	.	-7.48	0.000	0.731	906	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.04;AFR_AF=0.07;AMR_AF=0.02;AN=4;CAnc=G;DP=89;EUR_AF=0.05;GAnc=G;GRP=-7.48;HRun;MQ=37.59;MQ0=0;Map20=1;OAnc=G;TS=HPGO;TSseq=A,G,G,G;bSC=906;mSC=0.000;pSC=0.731	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,147,1946:22,29:0,0:0,0:0,0:0:37.59:0;0/1:38:99:553,0,711:13,8:0,0:6,11:0,0:0:37.00:0	+
6_24437445_G/A	6	24437445	A	ENSG00000112293	ENST00000230036	Transcript	NON_SYNONYMOUS_CODING	2204	2093	698	T/I	aCa/aTa	-	ENSP=ENSP00000230036;PolyPhen=possibly_damaging(0.824);SIFT=tolerated(0.33);HGNC=GPLD1	A	A/A,G/G	G	G	G	H/H,A/A	rs1772256	0.93	.	0.563	0.000	0.010	744	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.93;AFR_AF=0.73;AMR_AF=0.97;AN=4;ASN_AF=1.00;CAnc=G;DP=67;Dels=0.00;EUR_AF=0.99;FS=0.000;GAnc=G;GRP=0.563;HRun=0;HaplotypeScore=0.0000;MQ=38.80;MQ0=0;Map20=1;OAnc=G;QD=35.54;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=744;mSC=0.000;pSC=0.010	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1774,135,0:24,25:0,0:0,0:0,0:0:38.80:0;0/0:18:54.17:0,54,699:0,0:0,0:10,8:0,0:0:37.00:0	-
6_25097298_C/G	6	25097298	G	ENSG00000168405	ENST00000377989	Transcript	NON_SYNONYMOUS_CODING	1661	929	310	P/R	cCa/cGa	-	ENSP=ENSP00000367228;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=CMAHP	C	G/C,G/G	G	G	G	A/H,A/A	rs1128827	0.93	CpG	4.58	1.000	0.742	828	1	1000gALT=G;AC=3;AF=0.75;AF1000g=0.07;AFR_AF=0.16;AMR_AF=0.05;AN=4;ASN_AF=0.02;BaseQRankSum=0.171;CAnc=G;CpG;DP=81;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=G;GRP=4.58;HRun;HaplotypeScore=0.9997;MQ=38.41;MQ0=0;MQRankSum=0.407;Map20=1;OAnc=G;QD=12.97;ReadPosRankSum=1.773;TS=HPGOM;TSseq=C,G,G,G,G;bSC=828;mSC=1.000;pSC=0.742	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:42:99:575,0,767:0,0:12,11:9,9:1,0:0:38.41:0;1/1:39:99:1470,117,0:0,0:0,0:16,23:0,0:0:36.74:0	-
6_25108923_A/G	6	25108923	G	ENSG00000168405	ENST00000377989	Transcript	NON_SYNONYMOUS_CODING	1274	542	181	T/I	aCa/aTa	-	ENSP=ENSP00000367228;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CMAHP	A	G/A,G/G	G	G	G	A/H,A/A	rs1128826	0.93	.	4.51	1.000	0.224	833	1	1000gALT=G;AC=3;AF=0.75;AF1000g=0.07;AFR_AF=0.16;AMR_AF=0.05;AN=4;ASN_AF=0.02;BaseQRankSum=0.604;CAnc=G;DP=79;Dels=0.00;EUR_AF=0.06;FS=1.147;GAnc=G;GRP=4.51;HRun=0;HaplotypeScore=1.9995;MQ=37.68;MQ0=0;MQRankSum=-0.075;Map20=1;OAnc=G;QD=15.30;ReadPosRankSum=0.277;TS=HPGOM;TSseq=A,G,G,G,G;bSC=833;mSC=1.000;pSC=0.224	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:44:99:703,0,676:11,12:0,0:12,9:0,0:0:37.68:0;1/1:35:99:1389,105,0:0,0:0,0:14,21:0,0:0:37.00:0	-
6_27925629_A/T	6	27925629	T	ENSG00000124657	ENST00000244623	Transcript	NON_SYNONYMOUS_CODING	611	611	204	V/E	gTg/gAg	-	ENSP=ENSP00000244623;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR2B6	A	A/A,T/T	T	T	T	H/H,A/A	rs112779382	0.99	.	3.55	0.017	.	471	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=T;DP=71;EUR_AF=0.01;GAnc=T;GRP=3.55;HRun=0;MQ=38.21;MQ0=0;Map20=1;OAnc=T;TS=HPGO;TSseq=A,T,T,T;bSC=471;mSC=0.017	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:49:99:0,141,1850:22,27:0,0:0,0:0,0:0:38.21:0;1/1:22:66.21:856,66,0:0,0:0,0:0,0:14,8:0:37.00:0	+
6_28093526_G/A	6	28093526	A	ENSG00000196812	ENST00000340487	Transcript	NON_SYNONYMOUS_CODING	454	305	102	H/R	cAt/cGt	-	ENSP=ENSP00000366527;PolyPhen=benign(0.001);SIFT=tolerated(0.07);HGNC=ZSCAN16	G	G/G,A/A	A	A	A	H/H,A/A	rs34879925	0.99	CpG	1.62	0.011	0.940	432	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=A;CpG;DP=74;GAnc=A;GRP=1.62;HRun=0;MQ=38.16;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=432;mSC=0.011;pSC=0.940	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,153,2017:0,0:0,0:30,20:0,0:0:38.16:0;1/1:23:69.22:901,69,0:13,10:0,0:0,0:0,0:0:37.00:0	+
6_29430024_T/C	6	29430024	C	ENSG00000204688	ENST00000377132	Transcript	NON_SYNONYMOUS_CODING	1187	478	160	P/S	Ccc/Tcc	-	ENSP=ENSP00000366336;PolyPhen=benign(0.005);SIFT=tolerated(0.18);HGNC=OR2H1	T	T/T,C/T	C	C	C	H/H,A/H	rs191175468	1.0	.	-1.23	0.000	0.170	819	1	1000gALT=C;AC=1;AF=0.25;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=C;DP=86;GAnc=C;GRP=-1.23;HRun=2;MQ=38.04;MQ0=0;Map20=1;OAnc=C;TS=HPGO;TSseq=T,C,C,C;bSC=819;mSC=0.000;pSC=0.170	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:99:0,166,2142:0,0:0,0:0,0:32,24:1:38.04:0;0/1:29:99:256,0,697:0,0:5,4:0,0:9,11:0:37.00:0	+
6_29430097_G/A	6	29430097	A	ENSG00000204688	ENST00000377132	Transcript	NON_SYNONYMOUS_CODING	1260	551	184	Q/R	cAa/cGa	-	ENSP=ENSP00000366336;PolyPhen=benign(0.088);SIFT=tolerated(0.27);HGNC=OR2H1	G	G/G,A/G	A	A	G	H/H,A/H	rs189150803	1.0	CpG	-2.45	0.000	0.025	819	1	1000gALT=A;AC=1;AF=0.25;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=A;CpG;DP=78;GAnc=A;GRP=-2.45;HRun;MQ=40.08;MQ0=0;Map20=1;OAnc=G;TS=HPGO;TSseq=G,A,A,G;bSC=819;mSC=0.000;pSC=0.025	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:46:99:0,138,1747:0,0:0,0:24,21:0,0:0:40.08:0;0/1:31:99:577,0,459:8,9:0,0:7,7:0,0:0:37.00:0	+
6_29430202_C/T	6	29430202	T	ENSG00000204688	ENST00000377132	Transcript	NON_SYNONYMOUS_CODING	1365	656	219	I/T	aTt/aCt	-	ENSP=ENSP00000366336;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR2H1	C	C/C,T/C	T	T	T	H/H,A/H	rs193012486	1.0	.	1.9	0.254	0.250	819	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=T;DP=67;GAnc=T;GRP=1.9;HRun;MQ=38.80;MQ0=0;Map20=1;OAnc=T;TS=HPGO;TSseq=C,T,T,T;bSC=819;mSC=0.254;pSC=0.250	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:49:99:0,147,1945:0,0:27,22:0,0:0,0:0:38.80:0;0/1:18:99:415,0,173:0,0:4,2:0,0:6,6:0:37.00:0	+
6_30078275_C/T	6	30078275	T	ENSG00000204616	ENST00000376728	Transcript	NON_SYNONYMOUS_CODING	804	694	232	I/V	Att/Gtt	-	ENSP=ENSP00000365918;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=TRIM31	C	T/C,C/C	T	T	T	A/H,H/H	rs116273983	0.91	CpG	0.419	0.005	0.084	856	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.09;AFR_AF=0.03;AMR_AF=0.15;AN=4;ASN_AF=0.07;BaseQRankSum=1.000;CAnc=T;CpG;DP=73;Dels=0.00;EUR_AF=0.12;FS=14.420;GAnc=T;GRP=0.419;HRun=0;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;MQRankSum=0.747;Map20=1;OAnc=T;QD=19.31;ReadPosRankSum=0.471;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=856;mSC=0.005;pSC=0.084	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:45:99:899,0,623:0,0:13,6:0,0:9,17:0:37.00:0;0/0:28:44.26:0,44,997:0,0:13,14:0,0:1,0:0:37.00:0	-
6_30126285_C/T	6	30126285	T	ENSG00000204613	ENST00000376704	Transcript	NON_SYNONYMOUS_CODING	723	647	216	K/R	aAg/aGg	-	ENSP=ENSP00000365894;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TRIM10	C	T/C,C/C	T	T	T	A/H,H/H	rs115084590	0.98	.	1.94	0.001	0.668	846	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=2.232;CAnc=T;DP=86;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=1.94;HRun;HaplotypeScore=0.0000;MQ=37.74;MQ0=0;MQRankSum=1.263;Map20=1;OAnc=T;QD=16.14;ReadPosRankSum=-0.761;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=846;mSC=0.001;pSC=0.668	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:54:99:901,0,900:0,0:13,14:0,0:14,13:0:37.74:0;0/0:32:96.30:0,96,1240:0,0:18,14:0,0:0,0:0:37.00:0	-
6_30126303_T/A	6	30126303	A	ENSG00000204613	ENST00000376704	Transcript	NON_SYNONYMOUS_CODING	705	629	210	L/Q	cTg/cAg	-	ENSP=ENSP00000365894;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TRIM10	T	A/T,T/T	A	A	A	A/H,H/H	rs116692822	0.98	.	5.68	0.050	0.736	846	1	1000gALT=A;AC=1;AF=0.25;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=0.757;CAnc=A;DP=87;Dels=0.00;EUR_AF=0.02;FS=2.434;GAnc=A;GRP=5.68;HRun=0;HaplotypeScore=2.9913;MQ=38.35;MQ0=0;MQRankSum=0.757;Map20=1;OAnc=A;QD=15.96;ReadPosRankSum=-0.582;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=846;mSC=0.050;pSC=0.736	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:51:99:844,0,812:13,13:0,0:0,0:10,15:0:38.35:0;0/0:36:99:0,108,1419:0,0:0,0:0,0:23,13:0:37.00:0	-
6_30658385_C/T	6	30658385	T	ENSG00000137404	ENST00000444096	Transcript	NON_SYNONYMOUS_CODING	116	118	40	N/D	Aac/Gac	-	ENSP=ENSP00000397892;PolyPhen=benign(0.108);SIFT=tolerated(0.12);HGNC=NRM	C	C/C,T/T	T	T	T	H/H,A/A	rs114772092	0.97	.	-4.55	0.000	0.094	851	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.06;CAnc=T;DP=81;EUR_AF=0.02;GAnc=T;GRP=-4.55;HRun;MQ=38.26;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,N,T;bSC=851;mSC=0.000;pSC=0.094	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,101,1737:1,0:19,26:0,0:0,0:0:38.26:0;1/1:34:99:1333,102,0:0,0:0,0:0,0:13,21:0:37.00:0	-
6_32032756_A/T	6	32032756	T	ENSG00000168477	ENST00000375244	Transcript	NON_SYNONYMOUS_CODING	6885	6683	2228	Y/F	tAt/tTt	-	ENSP=ENSP00000364393;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=TNXB	A	A/A,T/A	T	T	T	H/H,A/H	rs3749960	0.98	.	4.82	.	0.006	923	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.05;CAnc=T;DP=73;GAnc=T;GRP=4.82;HRun=0;MQ=37.69;MQ0=0;Map20=1;OAnc=T;TS=HPGOC;TSseq=A,T,T,T,T;bSC=923;pSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,126,1629:20,22:0,0:0,0:0,0:0:37.69:0;0/1:30:99:521,0,460:7,7:0,0:0,0:10,6:0:37.00:0	-
6_32063793_T/C	6	32063793	C	ENSG00000168477	ENST00000375244	Transcript	NON_SYNONYMOUS_CODING	2039	1837	613	G/S	Ggt/Agt	-	ENSP=ENSP00000364393;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TNXB	T	T/T,C/T	C	C	C	H/H,A/H	rs61744970	0.98	.	4.26	.	0.004	917	1	1000gALT=C;AC=1;AF=0.25;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.05;CAnc=C;DP=54;GAnc=C;GRP=4.26;HRun;MQ=38.73;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=917;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:34:53.29:0,53,1144:0,1:0,0:0,0:19,13:0:38.73:0;0/1:20:99:303,0,343:0,0:2,7:0,0:4,7:0:37.00:0	-
6_32095255_A/G	6	32095255	G	ENSG00000213676	ENST00000375201	Transcript	NON_SYNONYMOUS_CODING	251	205	69	P/S	Cct/Tct	-	ENSP=ENSP00000364347;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ATF6B	A	A/A,G/A	G	G	G	H/H,A/H	.	1	.	4.17	.	0.870	906	1	AC=1;AF=0.25;AN=4;CAnc=G;DP=64;GAnc=G;GRP=4.17;HRun=4;MQ=38.41;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=906;pSC=0.870	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,123,1624:26,16:0,0:0,0:0,0:0:38.41:0;0/1:22:99:368,0,337:8,3:0,0:6,5:0,0:0:37.00:0	-
6_33036435_T/G	6	33036435	G	ENSG00000231389	ENST00000419277	Transcript	NON_SYNONYMOUS_CODING	905	775	259	P/T	Ccc/Acc	-	ENSP=ENSP00000393566;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=HLA-DPA1	T	G/T,G/T	G	G	-	A/H,A/H	.	1	.	2.93	0.000	0.693	867	1	AC=2;AF=0.50;AN=4;BaseQRankSum=0.235;CAnc=G;DP=79;Dels=0.00;FS=19.137;GAnc=G;GRP=2.93;HRun=3;HaplotypeScore=1.9945;MQ=39.20;MQ0=0;MQRankSum=0.165;Map20=1;QD=13.78;ReadPosRankSum=0.444;TS=HPGMC;TSseq=T,G,G,G,G;bSC=867;mSC=0.000;pSC=0.693	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:55:99:788,0,1021:0,0:0,0:10,14:24,7:0:39.20:0;0/1:24:99:456,0,346:0,0:0,0:6,7:5,6:0:37.93:0	-
6_36172374_C/T	6	36172374	T	ENSG00000096070	ENST00000527657	Transcript	NON_SYNONYMOUS_CODING	184	26	9	I/T	aTa/aCa	-	ENSP=ENSP00000431894;PolyPhen=unknown(0);HGNC=BRPF3	C	T/T,T/T	T	T	T	A/A,A/A	rs2245972	0.97	.	2.28	0.892	0.830	327	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.06;AMR_AF=0.01;AN=4;ASN_AF=0.05;CAnc=T;DP=92;Dels=0.00;FS=0.000;GAnc=T;GRP=2.28;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=36.30;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=327;mSC=0.892;pSC=0.830	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2066,160,0:0,0:0,0:0,0:24,31:0:37.00:0;1/1:36:99:1373,108,0:0,0:0,0:0,0:13,23:0:37.00:0	+
6_41126655_A/G	6	41126655	G	ENSG00000095970	ENST00000373113	Transcript	NON_SYNONYMOUS_CODING	726	632	211	P/L	cCg/cTg	-	ENSP=ENSP00000362205;PolyPhen=benign(0.002);SIFT=tolerated(0.17);HGNC=TREM2	A	G/G,G/G	G	G	G	A/A,A/A	rs2234256	0.97	CpG	-8.92	0.000	0.284	577	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.02;AN=4;CAnc=G;CpG;DP=58;Dels=0.00;FS=0.000;GAnc=G;GRP=-8.92;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.18;TS=HPGOMC;TSseq=A,G,G,-,G,A;bSC=577;mSC=0.000;pSC=0.284	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1293,99,0:0,0:0,0:14,18:0,0:0:37.00:0;1/1:25:35.24:920,35,0:1,0:0,0:10,14:0,0:0:37.00:0	-
6_42713274_G/A	6	42713274	A	ENSG00000124659	ENST00000244625	Transcript	NON_SYNONYMOUS_CODING	1102	538	180	S/P	Tcc/Ccc	-	ENSP=ENSP00000244625;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TBCC	G	A/G,A/A	A	A	-	A/H,A/A	rs2234028	0.98	.	0.295	0.093	0.782	568	1	1000gALT=A;AC=3;AF=0.75;AF1000g=0.02;AFR_AF=0.03;AN=4;ASN_AF=0.05;BaseQRankSum=-0.687;CAnc=A;DP=65;Dels=0.00;EUR_AF=0.01;FS=2.826;GAnc=A;GRP=0.295;HRun=0;HaplotypeScore=0.0000;MQ=38.48;MQ0=0;MQRankSum=1.623;Map20=1;QD=16.04;ReadPosRankSum=-0.950;TS=HPGC;TSseq=G,A,A,A;bSC=568;mSC=0.093;pSC=0.782	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:40:99:672,0,608:11,11:0,0:12,6:0,0:0:38.48:0;1/1:25:75.25:994,75,0:13,12:0,0:0,0:0,0:0:37.00:0	-
6_44145155_G/T	6	44145155	T	ENSG00000137225	ENST00000398776	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	1452	1414	472	S/A	Tcg/Gcg	-	ENSP=ENSP00000381758;PolyPhen=benign(0.001);SIFT=tolerated(0.18);HGNC=CAPN11	G	G/G,T/T	T	T	T	H/H,A/A	rs147936977	1.0	CpG	-9.48	.	0.072	851	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=T;CpG;DP=57;GAnc=T;GRP=-9.48;HRun=0;MQ=37.31;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=851;pSC=0.072	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,111,1457:0,0:0,0:11,23:0,0:0:37.31:0;1/1:20:57.18:742,57,0:0,0:0,0:0,0:11,9:0:37.00:0	+
6_46659911_T/C	6	46659911	C	ENSG00000180113	ENST00000316081	Transcript	NON_SYNONYMOUS_CODING	4046	4046	1349	A/V	gCa/gTa	-	ENSP=ENSP00000346065;PolyPhen=benign(0.001);SIFT=tolerated(0.71);HGNC=TDRD6	T	C/T,T/T	C	C	C	A/H,H/H	.	1	.	3.17	0.060	0.289	328	1	AC=1;AF=0.25;AN=4;BaseQRankSum=0.310;CAnc=C;DP=77;Dels=0.00;FS=0.000;GAnc=C;GRP=3.17;HRun=0;HaplotypeScore=1.9330;MQ=38.14;MQ0=0;MQRankSum=-0.290;Map20=1;OAnc=C;QD=14.76;ReadPosRankSum=-0.810;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=328;mSC=0.060;pSC=0.289	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:52:99:798,0,821:0,0:13,11:0,0:16,12:0:38.14:0;0/0:25:75.25:0,75,994:0,0:0,0:0,0:14,11:0:37.00:0	+
6_46977694_C/T	6	46977694	T	ENSG00000153292	ENST00000283297	Transcript	NON_SYNONYMOUS_CODING	886	886	296	I/V	Att/Gtt	-	ENSP=ENSP00000283297;PolyPhen=benign(0.001);SIFT=tolerated(0.26);HGNC=GPR110	C	T/C,C/C	T	T	T	A/H,H/H	.	1	CpG	-1.9	0.000	0.847	621	1	AC=1;AF=0.25;AN=4;BaseQRankSum=-0.533;CAnc=T;CpG;DP=86;Dels=0.00;FS=10.441;GAnc=T;GRP=-1.9;HRun=0;HaplotypeScore=4.9459;MQ=38.21;MQ0=0;MQRankSum=-0.131;Map20=1;OAnc=T;QD=13.43;ReadPosRankSum=1.437;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=621;mSC=0.000;pSC=0.847	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:49:99:688,0,926:0,0:8,19:0,0:12,10:0:38.21:0;0/0:37:99:0,111,1472:0,0:16,21:0,0:0,0:0:37.00:0	-
6_47681925_A/G	6	47681925	G	ENSG00000153294	ENST00000283303	Transcript	NON_SYNONYMOUS_CODING	1202	944	315	R/Q	cGg/cAg	-	ENSP=ENSP00000283303;PolyPhen=benign(0);SIFT=tolerated(0.36);HGNC=GPR115	A	A/A,G/A	G	G	G	H/H,A/H	rs114630843	0.99	CpG	-1.2	0.000	0.369	477	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=G;CpG;DP=63;GAnc=G;GRP=-1.2;HRun=2;MQ=37.75;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,A,G,C,G;bSC=477;mSC=0.000;pSC=0.369	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:99:0,117,1514:22,18:0,0:0,0:0,0:0:37.75:0;0/1:23:99:562,0,202:3,4:0,0:9,7:0,0:0:37.00:0	+
6_47682158_T/C	6	47682158	C	ENSG00000153294	ENST00000283303	Transcript	NON_SYNONYMOUS_CODING	1435	1177	393	P/S	Ccc/Tcc	-	ENSP=ENSP00000283303;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GPR115	T	T/T,C/T	C	C	C	H/H,A/H	rs79395681	0.99	.	4.38	0.894	0.163	477	1	1000gALT=C;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=C;DP=95;GAnc=C;GRP=4.38;HRun=2;MQ=39.56;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=477;mSC=0.894;pSC=0.163	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:99:0,169,2186:0,0:0,0:0,0:27,30:0:39.56:0;0/1:38:99:715,0,548:0,0:11,10:0,0:7,10:0:37.00:0	+
6_47682682_C/G	6	47682682	G	ENSG00000153294	ENST00000283303	Transcript	NON_SYNONYMOUS_CODING	1959	1701	567	L/F	ttG/ttC	-	ENSP=ENSP00000283303;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GPR115	C	C/C,G/C	G	G	G	H/H,A/H	rs115968193	0.99	CpG	5.24	0.882	0.169	477	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=G;CpG;DP=94;GAnc=G;GRP=5.24;HRun;MQ=38.41;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=477;mSC=0.882;pSC=0.169	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:63:99:0,190,2481:0,0:29,34:0,0:0,0:0:38.41:0;0/1:31:99:602,0,356:0,0:6,6:8,11:0,0:0:35.68:0	+
6_49519169_T/C	6	49519169	C	ENSG00000197261	ENST00000529246	Transcript	NON_SYNONYMOUS_CODING	1057	664	222	P/S	Ccc/Tcc	-	ENSP=ENSP00000434602;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C6orf141	T	C/C,C/C	C	C	C	A/A,A/A	rs41273692	0.96	.	1.22	0.001	0.046	772	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.13;AMR_AF=0.01;AN=4;CAnc=C;DP=45;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=1.22;HRun=3;HaplotypeScore=0.0000;MQ=37.99;MQ0=0;Map20=1;OAnc=C;QD=38.44;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=772;mSC=0.001;pSC=0.046	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:90.29:1186,90,0:0,0:18,12:0,0:0,0:0:37.99:0;1/1:15:42.12:529,42,0:0,0:9,6:0,0:0,0:0:37.00:0	+
6_51491866_A/T	6	51491866	T	ENSG00000170927	ENST00000371117	Transcript	NON_SYNONYMOUS_CODING	11990	11714	3905	N/I	aAt/aTt	-	ENSP=ENSP00000360158;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PKHD1	A	T/T,T/A	T	T	T	A/A,A/H	rs2661488	0.97	.	-1.65	0.001	0.168	711	1	1000gALT=T;AC=3;AF=0.75;AF1000g=0.03;AFR_AF=0.07;AMR_AF=0.02;AN=4;CAnc=T;DP=85;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=-1.65;HRun;HaplotypeScore=0.0000;MQ=37.84;MQ0=0;Map20=1;OAnc=T;QD=38.92;TS=HPGOMC;TSseq=A,T,C,T,T,T;bSC=711;mSC=0.001;pSC=0.168	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2173,166,0:0,0:0,0:0,0:17,35:0:37.84:0;0/1:30:99:527,0,460:5,9:0,0:0,0:4,12:0:37.00:0	-
6_56420158_C/T	6	56420158	T	ENSG00000151914	ENST00000244364	Transcript	NON_SYNONYMOUS_CODING	7460	7252	2418	I/V	Att/Gtt	-	ENSP=ENSP00000244364;PolyPhen=benign(0.001);HGNC=DST	C	T/T,T/T	T	T	T	A/A,A/A	rs62621210	0.96	.	4.8	0.995	0.922	172	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.12;AMR_AF=0.03;AN=4;CAnc=T;DP=98;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=4.8;HRun=0;HaplotypeScore=0.9832;MQ=37.48;MQ0=0;Map20=1;OAnc=T;QD=36.58;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=172;mSC=0.995;pSC=0.922	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2338,178,0:0,0:0,1:0,0:27,35:0:37.48:0;1/1:35:99:1381,105,0:0,0:0,0:0,0:19,16:0:37.00:0	-
6_56476335_T/C	6	56476335	C	ENSG00000151914	ENST00000244364	Transcript	NON_SYNONYMOUS_CODING	3715	3507	1169	M/I	atG/atA	-	ENSP=ENSP00000244364;PolyPhen=benign(0.004);HGNC=DST	T	T/T,C/C	C	C	C	H/H,A/A	.	1	.	2.22	0.546	0.431	123	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=111;GAnc=C;GRP=2.22;HRun=0;MQ=37.45;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=123;mSC=0.546;pSC=0.431	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:66:99:0,196,2564:0,0:0,0:0,0:20,43:0:37.45:0;1/1:45:99:1784,135,0:0,0:22,23:0,0:0,0:0:37.00:0	-
6_63991047_T/G	6	63991047	G	ENSG00000146166	ENST00000370657	Transcript	NON_SYNONYMOUS_CODING	443	409	137	H/N	Cac/Aac	-	ENSP=ENSP00000359691;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=LGSN	T	G/G,G/G	G	G	G	A/A,A/A	rs6454127	0.97	.	3.8	.	.	621	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.13;AMR_AF=0.01;AN=4;BaseQRankSum=1.627;CAnc=G;DP=101;Dels=0.00;FS=0.000;GAnc=G;GRP=3.8;HRun=0;HaplotypeScore=3.9804;MQ=38.64;MQ0=0;MQRankSum=-1.680;Map20=1;OAnc=G;QD=37.34;ReadPosRankSum=-1.365;TS=HPGOMC;TSseq=T,G,G,A,G,G;bSC=621	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:66:99:2498,172,0:0,0:0,0:15,49:0,1:0:38.64:0;1/1:35:99:1373,105,0:0,0:0,0:12,23:0,0:0:37.00:0	-
6_71234564_G/A	6	71234564	A	ENSG00000082269	ENST00000418814	Transcript	NON_SYNONYMOUS_CODING	2391	1777	593	I/V	Att/Gtt	-	ENSP=ENSP00000410768;PolyPhen=benign(0);SIFT=tolerated(0.44);HGNC=FAM135A	G	G/G,A/A	A	A	A	H/H,A/A	.	1	.	-1.04	0.991	0.947	485	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=84;GAnc=A;GRP=-1.04;HRun=0;MQ=38.64;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=485;mSC=0.991;pSC=0.947	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:54:99:0,163,2132:0,0:0,0:38,15:0,0:0:38.64:0;1/1:30:90.29:1191,90,0:12,18:0,0:0,0:0,0:0:37.00:0	+
6_74473314_T/C	6	74473314	C	ENSG00000156535	ENST00000287097	Transcript	NON_SYNONYMOUS_CODING	1125	1013	338	A/V	gCa/gTa	-	ENSP=ENSP00000287097;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CD109	T	T/T,C/C	C	C	C	H/H,A/A	rs41265533	1.0	.	4.03	1.000	0.735	631	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=97;GAnc=C;GRP=4.03;HRun=0;MQ=38.35;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=631;mSC=1.000;pSC=0.735	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:66:99:0,190,2469:0,0:0,0:0,0:38,28:0:38.35:0;1/1:31:93.30:1210,93,0:0,0:18,13:0,0:0,0:0:37.00:0	+
6_79577384_A/G	6	79577384	G	ENSG00000146243	ENST00000369940	Transcript	NON_SYNONYMOUS_CODING	196	91	31	G/R	Gga/Aga	-	ENSP=ENSP00000358956;PolyPhen=benign(0);SIFT=tolerated(0.86);HGNC=IRAK1BP1	A	G/G,G/G	G	G	G	A/A,A/A	rs191756094	1.0	.	2.56	0.000	0.017	377	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=G;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=2.56;HRun=3;HaplotypeScore=0.9997;MQ=36.40;MQ0=0;Map20=1;OAnc=G;QD=37.67;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=377;mSC=0.000;pSC=0.017	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1314,102,0:0,0:0,0:21,13:0,0:0:36.40:0;1/1:18:54.17:709,54,0:0,0:0,0:9,9:0,0:0:37.00:0	+
6_87971068_T/C	6	87971068	C	ENSG00000188994	ENST00000339907	Transcript	NON_SYNONYMOUS_CODING	7717	7706	2569	T/I	aCt/aTt	-	ENSP=ENSP00000342847;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZNF292	T	C/C,C/C	C	C	C	A/A,A/A	rs114321262	0.99	.	4	1.000	0.946	213	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;BaseQRankSum=-0.085;CAnc=C;DP=107;Dels=0.00;FS=3.540;GAnc=C;GRP=4;HRun=0;HaplotypeScore=2.1565;MQ=37.81;MQ0=0;MQRankSum=-0.767;Map20=1;OAnc=C;QD=37.69;ReadPosRankSum=-0.767;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=213;mSC=1.000;pSC=0.946	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2332,144,0:0,0:34,26:0,0:0,1:0:37.81:0;1/1:46:99:1807,138,0:0,0:23,23:0,0:0,0:0:36.78:0	+
6_97533133_A/T	6	97533133	T	ENSG00000186231	ENST00000369255	Transcript	NON_SYNONYMOUS_CODING	1015	321	107	D/E	gaT/gaA	-	ENSP=ENSP00000358259;PolyPhen=benign(0.134);SIFT=tolerated(0.62);HGNC=KLHL32	A	T/T,A/A	T	T	T	A/A,H/H	.	1	.	-7.65	0.788	0.797	806	1	AC=2;AF=0.50;AN=4;BaseQRankSum=1.641;CAnc=T;DP=76;Dels=0.00;FS=4.037;GAnc=T;GRP=-7.65;HRun=0;HaplotypeScore=3.9925;MQ=39.20;MQ0=0;MQRankSum=-1.550;Map20=1;OAnc=T;QD=35.16;ReadPosRankSum=0.456;TS=HPGOMC;TSseq=A,T,T,T,T,C;bSC=806;mSC=0.788;pSC=0.797	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:86.70:1439,87,0:1,0:0,1:0,0:15,23:0:39.20:0;0/0:36:99:0,108,1427:19,17:0,0:0,0:0,0:0:37.00:0	+
6_100368868_G/A	6	100368868	A	ENSG00000152034	ENST00000281806	Transcript	NON_SYNONYMOUS_CODING	1286	971	324	V/A	gTg/gCg	-	ENSP=ENSP00000281806;PolyPhen=benign(0);SIFT=tolerated(0.64);HGNC=MCHR2	G	A/A,A/A	A	A	A	A/A,A/A	.	1	CpG	2.94	0.170	0.272	900	1	AC=4;AF=1.00;AN=4;CAnc=A;CpG;DP=92;Dels=0.00;FS=0.000;GAnc=A;GRP=2.94;HRun=0;HaplotypeScore=1.7337;MQ=38.99;MQ0=0;Map20=1;OAnc=A;QD=36.44;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=900;mSC=0.170;pSC=0.272	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2183,172,0:26,32:0,0:0,0:0,0:0:38.99:0;1/1:33:96.31:1259,96,0:14,19:0,0:0,0:0,0:0:37.00:0	-
6_107780483_A/G	6	107780483	G	ENSG00000164494	ENST00000369031	Transcript	NON_SYNONYMOUS_CODING	286	7	3	L/F	Ctt/Ttt	-	ENSP=ENSP00000358027;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PDSS2	A	G/G,G/G	G	G	G	A/A,A/A	rs3734675	0.97	.	4.05	1.000	0.858	720	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.01;AN=4;ASN_AF=0.11;CAnc=G;DP=54;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=4.05;HRun;HaplotypeScore=0.0000;MQ=37.99;MQ0=0;Map20=1;OAnc=G;QD=38.65;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=720;mSC=1.000;pSC=0.858	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:90.29:1192,90,0:0,0:0,0:18,12:0,0:0:37.99:0;1/1:24:72.23:948,72,0:0,0:0,0:15,9:0,0:0:37.00:0	-
6_108076801_T/C	6	108076801	C	ENSG00000146285	ENST00000369021	Transcript	NON_SYNONYMOUS_CODING	43	43	15	G/R	Gga/Aga	-	ENSP=ENSP00000358017;PolyPhen=benign(0.172);SIFT=deleterious(0);HGNC=SCML4	T	C/C,T/T	C	C	C	A/A,H/H	rs117914882	0.98	.	-1.02	0.000	0.016	850	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AN=4;ASN_AF=0.07;CAnc=C;DP=59;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.02;HRun;HaplotypeScore=0.0000;MQ=38.57;MQ0=0;Map20=1;OAnc=C;QD=37.73;TS=HPGOMC;TSseq=T,C,C,T,C,C;bSC=850;mSC=0.000;pSC=0.016	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1278,99,0:0,0:15,16:0,0:0,0:0:38.57:0;0/0:26:78.24:0,78,1014:0,0:0,0:0,0:13,13:0:37.00:0	-
6_109802500_C/G	6	109802500	G	ENSG00000112365	ENST00000230122	Transcript	NON_SYNONYMOUS_CODING	898	730	244	Q/E	Cag/Gag	-	ENSP=ENSP00000230122;PolyPhen=benign(0.001);SIFT=tolerated(0.93);HGNC=ZBTB24	C	G/G,G/G	G	G	G	A/A,A/A	.	1	CpG	3.37	0.852	0.317	244	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=79;Dels=0.00;FS=0.000;GAnc=G;GRP=3.37;HRun=2;HaplotypeScore=0.9997;MQ=37.58;MQ0=0;Map20=1;OAnc=G;QD=37.51;TS=HPGOMC;TSseq=C,G,G,C,G,G;bSC=244;mSC=0.852;pSC=0.317	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1984,150,0:0,1:0,0:26,24:0,1:0:37.58:0;1/1:27:81.26:1067,81,0:0,0:0,0:8,19:0,0:0:37.00:0	-
6_121602785_T/A	6	121602785	A	ENSG00000146350	ENST00000275159	Transcript	NON_SYNONYMOUS_CODING	1513	1513	505	C/S	Tgt/Agt	-	ENSP=ENSP00000275159;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C6orf170	T	A/A,T/T	A	A	A	A/A,H/H	rs79221470	0.93	.	5.53	1.000	0.549	625	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.05;AMR_AF=0.09;AN=4;ASN_AF=0.13;BaseQRankSum=1.276;CAnc=A;DP=91;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=5.53;HRun=0;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;MQRankSum=-0.020;Map20=1;OAnc=A;QD=34.08;ReadPosRankSum=-0.142;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=625;mSC=1.000;pSC=0.549	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2214,104,0:19,43:0,0:0,0:1,1:0:38.84:0;0/0:27:81.26:0,81,1063:0,0:0,0:0,0:13,14:0:37.00:0	-
6_121625945_A/G	6	121625945	G	ENSG00000146350	ENST00000275159	Transcript	NON_SYNONYMOUS_CODING	725	725	242	S/L	tCg/tTg	-	ENSP=ENSP00000275159;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C6orf170	A	G/G,A/A	G	G	G	A/A,H/H	rs79040695	0.93	CpG	4.93	0.954	0.532	643	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.05;AMR_AF=0.09;AN=4;ASN_AF=0.13;CAnc=G;CpG;DP=97;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=4.93;HRun=0;HaplotypeScore=0.0000;MQ=40.16;MQ0=0;Map20=1;OAnc=G;QD=38.45;TS=HPGOMC;TSseq=A,G,G,G,-,G;bSC=643;mSC=0.954;pSC=0.532	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2378,184,0:0,0:0,0:42,19:0,0:0:40.16:0;0/0:36:99:0,108,1411:18,18:0,0:0,0:0,0:0:37.00:0	-
6_121638682_G/A	6	121638682	A	ENSG00000146350	ENST00000275159	Transcript	NON_SYNONYMOUS_CODING	454	454	152	C/R	Tgc/Cgc	-	ENSP=ENSP00000275159;PolyPhen=benign(0);SIFT=tolerated(0.2);HGNC=C6orf170	G	A/A,G/G	A	A	A	A/A,H/H	rs75540618	0.93	CpG	3.86	0.998	0.710	682	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.05;AMR_AF=0.09;AN=4;ASN_AF=0.13;CAnc=A;CpG;DP=78;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=3.86;HRun=0;HaplotypeScore=0.0000;MQ=39.65;MQ0=0;Map20=1;OAnc=A;QD=37.77;TS=HPGOMC;TSseq=G,A,A,A,A,-;bSC=682;mSC=0.998;pSC=0.710	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1695,129,0:15,29:0,0:0,0:0,0:0:39.65:0;0/0:34:99:0,99,1294:0,0:0,0:15,19:0,0:0:37.00:0	-
6_139170412_A/G	6	139170412	G	ENSG00000203734	ENST00000367682	Transcript	NON_SYNONYMOUS_CODING	1013	910	304	V/M	Gtg/Atg	-	ENSP=ENSP00000356655;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ECT2L	A	G/G,A/A	G	G	G	A/A,H/H	rs75962473	0.99	.	3.8	0.931	0.084	793	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;BaseQRankSum=0.898;CAnc=G;DP=93;Dels=0.00;FS=0.000;GAnc=G;GRP=3.8;HRun;HaplotypeScore=1.9995;MQ=38.10;MQ0=0;MQRankSum=-0.770;Map20=1;OAnc=G;QD=36.88;ReadPosRankSum=-0.064;TS=HPGOMC;TSseq=A,G,G,G,G,-;bSC=793;mSC=0.931;pSC=0.084	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2025,123,0:0,1:0,0:23,30:0,0:0:38.10:0;0/0:39:99:0,114,1485:15,24:0,0:0,0:0,0:0:37.00:0	+
6_139564117_G/C	6	139564117	C	ENSG00000164440	ENST00000358430	Transcript	NON_SYNONYMOUS_CODING	1834	1601	534	G/A	gGt/gCt	-	ENSP=ENSP00000351206;PolyPhen=benign(0);SIFT=tolerated(0.55);HGNC=TXLNB	G	G/G,C/C	C	C	C	H/H,A/A	rs61754935	0.97	.	2.37	0.000	0.005	805	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.09;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=C;DP=69;GAnc=C;GRP=2.37;HRun;MQ=38.48;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=805;mSC=0.000;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:99:0,120,1579:0,0:0,0:19,21:0,0:0:38.48:0;1/1:29:87.26:1113,87,0:0,0:14,15:0,0:0,0:0:37.00:0	-
6_144507910_G/A	6	144507910	A	ENSG00000135604	ENST00000367568	Transcript	NON_SYNONYMOUS_CODING	329	146	49	Q/R	cAg/cGg	-	ENSP=ENSP00000356540;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=STX11	G	A/A,A/A	A	A	A	A/A,A/A	rs17073498	0.98	CpG	2.05	1.000	0.911	822	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.03;AN=4;ASN_AF=0.05;CAnc=A;CpG;DP=73;Dels=0.00;FS=0.000;GAnc=A;GRP=2.05;HRun=0;HaplotypeScore=0.9992;MQ=38.73;MQ0=0;Map20=1;OAnc=A;QD=38.15;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=822;mSC=1.000;pSC=0.911	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1979,153,0:29,21:0,0:0,0:0,0:0:38.73:0;1/1:22:66.21:853,66,0:13,9:0,0:0,0:0,0:0:37.00:0	+
6_147038089_G/T	6	147038089	T	ENSG00000118492	ENST00000367493	Transcript	NON_SYNONYMOUS_CODING	1853	69	23	D/E	gaT/gaG	-	ENSP=ENSP00000356463;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ADGB	G	T/T,G/G	T	T	T	A/A,H/H	rs61748896	0.93	.	-0.985	0.041	0.172	837	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.30;AMR_AF=0.03;AN=4;ASN_AF=0.01;CAnc=T;DP=75;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.985;HRun=0;HaplotypeScore=0.0000;MQ=38.52;MQ0=0;Map20=1;OAnc=T;QD=37.97;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=837;mSC=0.041;pSC=0.172	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1514,114,0:0,0:0,0:0,0:23,16:0:38.52:0;0/0:36:99:0,108,1434:0,0:0,0:19,17:0,0:0:37.00:0	+
6_149068627_A/T	6	149068627	T	ENSG00000111962	ENST00000367463	Transcript	NON_SYNONYMOUS_CODING	164	61	21	L/M	Ttg/Atg	-	ENSP=ENSP00000356433;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=UST	A	T/T,T/T	T	T	T	A/A,A/A	rs9498146	0.95	.	0.657	0.000	0.507	966	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.07;AMR_AF=0.04;AN=4;ASN_AF=0.04;CAnc=T;DP=38;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=0.657;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=36.24;TS=HPGOMC;TSseq=A,N,T,N,T,C;bSC=966;mSC=0.000;pSC=0.507	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:22:63.21:830,63,0:0,0:0,0:0,0:11,11:0:37.00:0;1/1:16:48.15:631,48,0:0,0:0,0:0,0:11,5:0:37.00:0	+
6_149918766_T/C	6	149918766	C	ENSG00000186625	ENST00000335643	Transcript	NON_SYNONYMOUS_CODING	1079	799	267	A/T	Gct/Act	-	ENSP=ENSP00000335180;PolyPhen=benign(0.013);SIFT=tolerated(1);HGNC=KATNA1	T	C/C,C/C	C	C	C	A/A,A/A	rs73781249	1.0	.	5.48	1.000	0.963	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-0.524;CAnc=C;DP=71;Dels=0.00;FS=0.000;GAnc=C;GRP=5.48;HRun=0;HaplotypeScore=0.0000;MQ=40.28;MQ0=0;MQRankSum=-1.330;Map20=1;OAnc=C;QD=36.34;ReadPosRankSum=1.652;TS=HPGOMC;TSseq=T,C,C,C,C,C;mSC=1.000;pSC=0.963	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:89.41:1632,89,0:0,0:25,17:0,0:2,0:0:40.28:0;1/1:27:81.26:1052,81,0:0,0:13,14:0,0:0,0:0:37.00:0	-
6_150386722_C/T	6	150386722	T	ENSG00000131019	ENST00000253335	Transcript	NON_SYNONYMOUS_CODING	495	440	147	Q/R	cAg/cGg	-	ENSP=ENSP00000253335;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ULBP3	C	C/C,T/C	T	T	-	H/H,A/H	rs35374376	0.99	CpG	3.34	0.000	0.274	917	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=T;CpG;DP=83;GAnc=T;GRP=3.34;HRun=0;MQ=37.52;MQ0=0;Map20=1;TS=HPG;TSseq=C,T,T;bSC=917;mSC=0.000;pSC=0.274	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:53:99:0,116,1912:0,0:20,30:0,0:1,1:0:37.52:0;0/1:30:99:513,0,452:0,0:8,6:0,0:11,5:0:37.00:0	-
6_151161086_T/C	6	151161086	C	ENSG00000120278	ENST00000358517	Transcript	NON_SYNONYMOUS_CODING	3423	3212	1071	A/V	gCg/gTg	-	ENSP=ENSP00000351318;PolyPhen=benign(0);SIFT=tolerated(0.46);HGNC=PLEKHG1	T	C/C,C/C	C	C	C	A/A,A/A	rs17080410	0.97	CpG	3.05	0.000	0.794	713	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.02;BaseQRankSum=0.844;CAnc=C;CpG;DP=61;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=3.05;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-0.044;Map20=1;OAnc=C;QD=36.38;ReadPosRankSum=-1.022;TS=HPGOMC;TSseq=T,C,-,C,C,T;bSC=713;mSC=0.000;pSC=0.794	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:77.37:1452,77,0:0,0:25,13:0,0:1,0:0:37.00:0;1/1:22:66.21:860,66,0:0,0:12,10:0,0:0,0:0:37.00:0	+
6_151161116_G/A	6	151161116	A	ENSG00000120278	ENST00000358517	Transcript	NON_SYNONYMOUS_CODING	3453	3242	1081	E/G	gAa/gGa	-	ENSP=ENSP00000351318;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PLEKHG1	G	A/A,A/G	A	A	A	A/A,A/H	rs61742396	0.97	.	5.81	0.465	0.819	714	1	1000gALT=A;AC=3;AF=0.75;AF1000g=0.03;AFR_AF=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.02;BaseQRankSum=-0.040;CAnc=A;DP=69;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=5.81;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.571;Map20=1;OAnc=A;QD=36.17;ReadPosRankSum=-1.733;TS=HPGOMC;TSseq=G,A,-,A,A,A;bSC=714;mSC=0.465;pSC=0.819	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:89.42:1624,89,0:28,14:0,0:1,0:0,0:0:37.00:0;0/1:25:99:336,0,485:6,5:0,0:7,7:0,0:0:37.00:0	+
6_151161836_T/C	6	151161836	C	ENSG00000120278	ENST00000358517	Transcript	NON_SYNONYMOUS_CODING	4173	3962	1321	S/L	tCg/tTg	-	ENSP=ENSP00000351318;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PLEKHG1	T	C/C,C/C	C	C	C	A/A,A/A	rs17054318	0.97	CpG	5.64	0.006	0.019	710	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.02;BaseQRankSum=-1.275;CAnc=C;CpG;DP=98;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=5.64;HRun=0;HaplotypeScore=0.9997;MQ=38.49;MQ0=0;MQRankSum=-0.360;Map20=1;OAnc=C;QD=36.79;ReadPosRankSum=0.556;TS=HPGOMC;TSseq=T,C,-,C,C,C;bSC=710;mSC=0.006;pSC=0.019	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1983,119,0:0,0:28,23:0,0:1,0:0:38.49:0;1/1:45:95.41:1645,95,0:0,0:21,23:0,0:1,0:0:37.00:0	+
6_154360569_C/T	6	154360569	T	ENSG00000112038	ENST00000434900	Transcript	STOP_LOST	687	169	57	*/Q	Tag/Cag	-	ENSP=ENSP00000394624;HGNC=OPRM1	C	T/T,T/T	T	T	T	A/A,A/A	rs17174638	0.97	.	-3.43	.	0.313	893	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.13;AN=4;CAnc=T;DP=58;Dels=0.00;FS=0.000;GAnc=T;GRP=-3.43;HRun=0;HaplotypeScore=0.9997;MQ=38.68;MQ0=0;Map20=1;OAnc=T;QD=36.40;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=893;pSC=0.313	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1307,99,0:0,0:0,0:0,0:16,19:0:38.68:0;1/1:23:69.22:910,69,0:0,0:0,0:0,0:14,9:0:37.00:0	+
6_158924602_T/A	6	158924602	A	ENSG00000130338	ENST00000367097	Transcript	NON_SYNONYMOUS_CODING	5264	3907	1303	M/L	Atg/Ttg	-	ENSP=ENSP00000356064;PolyPhen=benign(0.001);SIFT=tolerated(0.72);HGNC=TULP4	T	T/T,A/A	A	A	A	H/H,A/A	.	1	.	1.96	1.000	0.340	637	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=67;GAnc=A;GRP=1.96;HRun=0;MQ=38.35;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=637;mSC=1.000;pSC=0.340	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:44:99:0,123,1642:0,0:0,0:0,0:27,17:0:38.35:0;1/1:23:69.22:911,69,0:13,10:0,0:0,0:0,0:0:37.00:0	+
6_159084407_C/T	6	159084407	T	ENSG00000164674	ENST00000297239	Transcript	NON_SYNONYMOUS_CODING	301	107	36	I/T	aTa/aCa	-	ENSP=ENSP00000297239;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SYTL3	C	T/T,C/C	T	T	-	A/A,H/H	.	1	.	4.28	0.755	0.347	840	1	AC=2;AF=0.50;AN=4;BaseQRankSum=1.320;CAnc=T;DP=61;Dels=0.00;FS=3.928;GAnc=T;GRP=4.28;HRun=0;HaplotypeScore=2.8651;MQ=37.69;MQ0=0;MQRankSum=1.238;Map20=1;QD=35.59;ReadPosRankSum=0.330;TS=HPG;TSseq=C,T,T;bSC=840;mSC=0.755;pSC=0.347	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:92.05:1563,92,0:0,0:0,1:0,0:25,16:0:37.69:0;0/0:18:51.16:0,51,652:0,0:7,11:0,0:0,0:0:37.00:0	+
6_161565204_T/C	6	161565204	C	ENSG00000026652	ENST00000437165	Transcript	NON_SYNONYMOUS_CODING	274	275	92	R/Q	cGa/cAa	-	ENSP=ENSP00000400211;PolyPhen=unknown(0);HGNC=AGPAT4	T	C/C,T/T	C	C	C	A/A,H/H	rs115983545	0.98	CpG	-2.72	.	0.002	851	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;BaseQRankSum=-1.011;CAnc=C;CpG;DP=66;Dels=0.01;FS=0.000;GAnc=C;GRP=-2.72;HRun=0;HaplotypeScore=3.8660;MQ=38.21;MQ0=0;MQRankSum=0.289;Map20=1;OAnc=C;QD=36.18;ReadPosRankSum=-1.516;TS=HPGOMC;TSseq=T,C,-,C,T,-;bSC=851;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1806,104,0:0,0:21,25:0,0:0,1:0:38.21:0;0/0:17:51.17:0,51,680:0,0:0,0:0,0:6,11:0:37.00:0	-
6_167738668_G/A	6	167738668	A	ENSG00000120440	ENST00000239587	Transcript	NON_SYNONYMOUS_CODING	95	7	3	R/G	Agg/Ggg	-	ENSP=ENSP00000239587;PolyPhen=benign(0);SIFT=tolerated(0.84);HGNC=TTLL2	G	A/A,A/A	A	A	A	A/A,A/A	rs12526094	0.94	.	-2.61	0.003	0.013	.	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.16;AMR_AF=0.09;AN=4;ASN_AF=0.04;CAnc=A;DP=64;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=-2.61;HRun;HaplotypeScore=0.0000;MQ=37.46;MQ0=0;Map20=1;OAnc=A;QD=37.34;TS=HPGOM;TSseq=G,A,A,A,A;mSC=0.003;pSC=0.013	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1564,120,0:17,24:0,0:0,0:0,0:0:37.46:0;1/1:23:69.23:920,69,0:13,10:0,0:0,0:0,0:0:37.00:0	+
7_3180740_C/A	7	3180740	A	ENSG00000217455	ENST00000402115	Transcript	NON_SYNONYMOUS_CODING	382	275	92	V/G	gTg/gGg	-	ENSP=ENSP00000385245;PolyPhen=unknown(0)	C	C/C,A/A	A	-	A	H/H,A/A	rs73673358	0.98	.	-2.66	0.000	.	980	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.01;AN=4;CAnc=A;DP=77;GRP=-2.66;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=A;TS=HPOM;TSseq=C,A,A,A;bSC=980;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,132,1732:0,0:23,19:0,0:1,0:0:37.00:0;1/1:32:96.31:1271,96,0:10,22:0,0:0,0:0,0:0:37.00:0	-
7_6088453_C/T	7	6088453	T	ENSG00000086232	ENST00000199389	Transcript	NON_SYNONYMOUS_CODING	581	434	145	H/R	cAt/cGt	-	ENSP=ENSP00000199389;PolyPhen=benign(0);SIFT=tolerated(0.95);HGNC=EIF2AK1	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	3.27	0.913	.	637	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=100;GAnc=T;GRP=3.27;HRun=0;MQ=38.56;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=637;mSC=0.913	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:64:99:0,190,2470:0,0:33,29:0,0:1,0:0:38.56:0;1/1:36:99:1429,108,0:0,0:0,0:0,0:18,18:0:37.00:0	-
7_6714764_G/A	7	6714764	A	ENSG00000198580	ENST00000399484	Transcript	NON_SYNONYMOUS_CODING	371	371	124	Y/C	tAt/tGt	-	ENSP=ENSP00000407971;PolyPhen=benign(0.01);SIFT=tolerated(1)	G	A/A,A/A	A	A	A	A/A,A/A	rs114404778	0.96	.	-2.59	0.000	0.046	866	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.05;AMR_AF=0.06;AN=4;CAnc=A;DP=92;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=A;GRP=-2.59;HRun=0;HaplotypeScore=0.9979;MQ=39.06;MQ0=0;Map20=1;OAnc=A;QD=38.24;TS=HPGOMC;TSseq=G,A,N,A,A,A;bSC=866;mSC=0.000;pSC=0.046	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2213,172,0:38,19:0,0:0,0:0,0:0:39.06:0;1/1:35:99:1381,105,0:20,15:0,0:0,0:0,0:0:37.00:0	+
7_7493097_C/G	7	7493097	G	ENSG00000215018	ENST00000399419	Transcript	NON_SYNONYMOUS_CODING	1531	1414	472	P/A	Cca/Gca	-	ENSP=ENSP00000382347;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=COL28A1	C	G/G,G/G	G	G	G	A/A,A/A	rs17167927	0.95	CpG	4.09	1.000	0.879	773	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.20;AMR_AF=0.01;AN=4;ASN_AF=0.01;BaseQRankSum=1.093;CAnc=G;CpG;DP=65;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=4.09;HRun=3;HaplotypeScore=1.5781;MQ=39.09;MQ0=0;MQRankSum=0.915;Map20=1;OAnc=G;QD=34.97;ReadPosRankSum=-1.979;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=773;mSC=1.000;pSC=0.879	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:51.15:1502,51,0:0,0:1,0:22,18:0,0:0:39.09:0;1/1:23:69.20:869,69,0:0,0:0,0:12,11:0,0:0:37.00:0	-
7_12376842_C/T	7	12376842	T	ENSG00000146530	ENST00000275358	Transcript	NON_SYNONYMOUS_CODING	4612	4423	1475	I/V	Atc/Gtc	-	ENSP=ENSP00000275358;PolyPhen=benign(0);SIFT=tolerated(0.5);HGNC=VWDE	C	T/T,C/C	T	T	T	A/A,H/H	rs73292361	0.98	CpG	-9.72	0.000	0.695	839	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=T;CpG;DP=69;Dels=0.00;FS=0.000;GAnc=T;GRP=-9.72;HRun=0;HaplotypeScore=0.0000;MQ=37.69;MQ0=0;Map20=1;OAnc=T;QD=37.97;TS=HPGOMC;TSseq=C,T,T,C,T,C;bSC=839;mSC=0.000;pSC=0.695	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1666,126,0:0,0:0,0:0,0:16,27:0:37.69:0;0/0:26:38.25:0,38,951:0,0:14,11:0,0:1,0:0:37.00:0	-
7_17375392_T/C	7	17375392	C	ENSG00000106546	ENST00000242057	Transcript	NON_SYNONYMOUS_CODING	1785	1142	381	A/V	gCa/gTa	-	ENSP=ENSP00000242057;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=AHR	T	C/C,C/C	C	C	C	A/A,A/A	.	1	.	5.98	1.000	0.585	677	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.732;CAnc=C;DP=83;Dels=0.00;FS=3.388;GAnc=C;GRP=5.98;HRun=0;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;MQRankSum=1.516;Map20=1;OAnc=C;QD=37.32;ReadPosRankSum=0.072;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=677;mSC=1.000;pSC=0.585	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1824,104,0:0,0:26,20:0,0:0,1:0:38.84:0;1/1:35:99:1380,105,0:0,0:20,15:0,0:0,0:0:37.00:0	+
7_20193979_T/G	7	20193979	G	ENSG00000183742	ENST00000332878	Transcript	NON_SYNONYMOUS_CODING	2297	2183	728	A/E	gCg/gAg	-	ENSP=ENSP00000328410;PolyPhen=benign(0);SIFT=tolerated(0.06);HGNC=MACC1	T	G/G,G/G	G	G	G	A/A,A/A	rs12671170	0.98	CpG	3.73	0.391	0.015	743	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.06;AN=4;ASN_AF=0.04;CAnc=G;CpG;DP=66;Dels=0.00;FS=0.000;GAnc=G;GRP=3.73;HRun=0;HaplotypeScore=0.9997;MQ=40.59;MQ0=0;Map20=1;OAnc=G;QD=38.25;TS=HPGOMC;TSseq=T,G,G,G,C,C;bSC=743;mSC=0.391;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1563,120,0:0,0:0,0:25,15:0,0:0:40.59:0;1/1:26:78.25:1029,78,0:0,0:0,0:14,12:0,0:0:37.00:0	-
7_20201433_A/C	7	20201433	C	ENSG00000183742	ENST00000332878	Transcript	NON_SYNONYMOUS_CODING	167	53	18	R/M	aGg/aTg	-	ENSP=ENSP00000328410;PolyPhen=benign(0);SIFT=tolerated(0.2);HGNC=MACC1	A	A/A,C/C	C	C	C	H/H,A/A	.	1	.	-0.946	0.282	0.020	760	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=84;GAnc=C;GRP=-0.946;HRun;MQ=38.92;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,T,C;bSC=760;mSC=0.282;pSC=0.020	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:46:99:0,120,1572:17,29:0,0:0,0:0,0:0:38.92:0;1/1:38:99:1496,114,0:0,0:19,19:0,0:0,0:0:37.00:0	-
7_20201458_G/A	7	20201458	A	ENSG00000183742	ENST00000332878	Transcript	NON_SYNONYMOUS_CODING	142	28	10	W/R	Tgg/Cgg	-	ENSP=ENSP00000328410;PolyPhen=benign(0);SIFT=tolerated(0.2);HGNC=MACC1	G	A/A,G/G	A	A	A	A/A,H/H	rs117142233	0.98	CpG	2.74	0.332	0.067	760	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.06;AN=4;ASN_AF=0.04;CAnc=A;CpG;DP=105;Dels=0.00;FS=0.000;GAnc=A;GRP=2.74;HRun=4;HaplotypeScore=0.0000;MQ=38.77;MQ0=0;Map20=1;OAnc=A;QD=36.30;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=760;mSC=0.332;pSC=0.067	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2392,184,0:20,45:0,0:0,0:0,0:0:38.77:0;0/0:40:80.38:0,80,1500:0,1:0,0:22,17:0,0:0:37.00:0	-
7_21658770_G/A	7	21658770	A	ENSG00000105877	ENST00000328843	Transcript	NON_SYNONYMOUS_CODING	4353	4322	1441	Q/R	cAg/cGg	-	ENSP=ENSP00000330671;PolyPhen=benign(0);SIFT=tolerated(0.65);HGNC=DNAH11	G	G/G,A/G	A	A	A	H/H,A/H	.	1	CpG	0.511	0.053	0.435	706	1	AC=1;AF=0.25;AN=4;CAnc=A;CpG;DP=84;GAnc=A;GRP=0.511;HRun=0;MQ=37.62;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=706;mSC=0.053;pSC=0.435	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,141,1838:0,1:0,0:31,16:0,0:0:37.62:0;0/1:36:99:636,0,549:8,11:0,0:8,9:0,0:0:37.00:0	+
7_21892230_T/C	7	21892230	C	ENSG00000105877	ENST00000328843	Transcript	NON_SYNONYMOUS_CODING	11094	11063	3688	A/V	gCg/gTg	-	ENSP=ENSP00000330671;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DNAH11	T	C/C,C/C	C	C	C	A/A,A/A	.	1	CpG	5.29	0.122	0.133	828	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.573;CAnc=C;CpG;DP=83;Dels=0.00;FS=0.000;GAnc=C;GRP=5.29;HRun=0;HaplotypeScore=2.9992;MQ=38.64;MQ0=0;MQRankSum=-1.718;Map20=1;OAnc=C;QD=35.88;ReadPosRankSum=-1.076;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=828;mSC=0.122;pSC=0.133	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:82.51:1970,83,0:0,0:37,14:0,0:2,0:0:38.64:0;1/1:29:87.27:1133,87,0:0,0:16,13:0,0:0,0:0:37.00:0	+
7_22202046_G/T	7	22202046	T	ENSG00000136237	ENST00000258735	Transcript	NON_SYNONYMOUS_CODING	488	488	163	H/P	cAt/cCt	-	ENSP=ENSP00000258735;PolyPhen=benign(0.005);SIFT=tolerated(1);HGNC=RAPGEF5	G	T/T,G/G	T	T	T	A/A,H/H	rs28716840	0.97	.	4.27	1.000	0.505	783	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.05;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=T;DP=98;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=4.27;HRun=0;HaplotypeScore=0.9997;MQ=38.22;MQ0=0;Map20=1;OAnc=T;QD=38.15;TS=HPGOMC;TSseq=G,T,T,-,T,T;bSC=783;mSC=1.000;pSC=0.505	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:73:99:2818,217,0:0,0:0,0:0,0:26,46:0:38.22:0;0/0:25:75.24:0,75,982:0,0:0,0:6,19:0,0:0:37.00:0	-
7_23728916_G/A	7	23728916	A	ENSG00000188732	ENST00000344962	Transcript	NON_SYNONYMOUS_CODING	357	268	90	T/A	Acg/Gcg	-	ENSP=ENSP00000342576;PolyPhen=benign(0.001);SIFT=tolerated(0.6);HGNC=C7orf46	G	G/G,A/A	A	A	A	H/H,A/A	rs34518648	0.91	.	1.36	0.633	0.658	646	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.03;AMR_AF=0.06;AN=4;ASN_AF=0.16;CAnc=A;DP=79;EUR_AF=0.08;GAnc=A;GRP=1.36;HRun=2;MQ=38.21;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=646;mSC=0.633;pSC=0.658	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:49:99:0,147,1937:0,0:0,0:20,29:0,0:0:38.21:0;1/1:30:90.29:1171,90,0:14,16:0,0:0,0:0,0:0:37.04:0	+
7_23728931_T/C	7	23728931	C	ENSG00000188732	ENST00000344962	Transcript	NON_SYNONYMOUS_CODING	372	283	95	R/C	Cgc/Tgc	-	ENSP=ENSP00000342576;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C7orf46	T	T/T,C/C	C	C	C	H/H,A/A	rs35495590	0.91	CpG	2.86	1.000	0.770	646	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.04;AMR_AF=0.06;AN=4;ASN_AF=0.16;CAnc=C;CpG;DP=70;EUR_AF=0.08;GAnc=C;GRP=2.86;HRun=0;MQ=37.71;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=646;mSC=1.000;pSC=0.770	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,108,1405:0,0:0,0:0,0:20,22:0:37.71:0;1/1:28:84.26:1074,84,0:0,0:14,14:0,0:0,0:0:36.64:0	+
7_29980471_C/T	7	29980471	T	ENSG00000136193	ENST00000242059	Transcript	NON_SYNONYMOUS_CODING	724	566	189	N/S	aAt/aGt	-	ENSP=ENSP00000242059;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SCRN1	C	T/T,T/T	T	T	T	A/A,A/A	rs35960711	0.94	.	3.05	0.911	0.683	635	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.07;AMR_AF=0.04;AN=4;ASN_AF=0.09;CAnc=T;DP=74;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=3.05;HRun;HaplotypeScore=0.9867;MQ=37.77;MQ0=0;Map20=1;OAnc=T;QD=37.25;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=635;mSC=0.911;pSC=0.683	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1486,114,0:0,0:0,0:0,0:21,17:0:37.77:0;1/1:35:99:1380,105,0:0,0:0,0:0,0:18,17:0:37.00:0	-
7_30831181_C/T	7	30831181	T	ENSG00000106125	ENST00000265299	Transcript	NON_SYNONYMOUS_CODING	1141	1064	355	V/A	gTa/gCa	-	ENSP=ENSP00000265299;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=FAM188B	C	C/C,T/T	T	T	T	H/H,A/A	rs12672119	0.93	.	-4.66	0.000	0.206	861	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.04;AMR_AF=0.02;AN=4;ASN_AF=0.19;CAnc=T;DP=62;EUR_AF=0.02;GAnc=T;GRP=-4.66;HRun=0;MQ=38.55;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,C;bSC=861;mSC=0.000;pSC=0.206	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,114,1464:0,0:19,19:0,0:0,0:0:38.55:0;1/1:24:72.23:949,72,0:0,0:0,0:0,0:15,9:0:37.00:0	+
7_47971543_G/C	7	47971543	C	ENSG00000158683	ENST00000289672	Transcript	NON_SYNONYMOUS_CODING	560	509	170	G/A	gGt/gCt	-	ENSP=ENSP00000289672;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PKD1L1	G	C/C,G/G	C	C	C	A/A,H/H	.	1	.	0.732	0.001	0.091	804	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=72;Dels=0.00;FS=0.000;GAnc=C;GRP=0.732;HRun;HaplotypeScore=2.9992;MQ=37.58;MQ0=0;Map20=1;OAnc=C;QD=38.75;TS=HPGOMC;TSseq=G,C,C,C,-,C;bSC=804;mSC=0.001;pSC=0.091	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2048,157,0:0,0:28,24:0,0:0,0:0:37.58:0;0/0:20:60.20:0,60,800:0,0:0,0:9,11:0,0:0:37.00:0	-
7_55606342_G/C	7	55606342	C	ENSG00000154978	ENST00000545390	Transcript	NON_SYNONYMOUS_CODING	9	9	3	R/S	agG/agC	-	ENSP=ENSP00000446442;PolyPhen=benign(0.007);SIFT=tolerated(0.74);HGNC=VOPP1	G	C/C,C/C	C	C	C	A/A,A/A	rs139766541	0.99	CpG,RM	-2.92	0.000	0.136	867	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;BaseQRankSum=0.938;CAnc=C;CpG;DP=87;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-2.92;HRun;HaplotypeScore=0.0000;MQ=37.62;MQ0=0;MQRankSum=-1.299;Map20=1;OAnc=C;QD=37.36;RM;ReadPosRankSum=0.072;TS=HPGOM;TSseq=G,C,C,C,N;bSC=867;mSC=0.000;pSC=0.136	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1826,104,0:0,0:28,18:1,0:0,0:0:37.62:0;1/1:39:99:1518,117,0:0,0:24,15:0,0:0,0:0:37.00:0	-
7_82583388_A/G	7	82583388	G	ENSG00000186472	ENST00000333891	Transcript	NON_SYNONYMOUS_CODING	7219	6881	2294	P/L	cCt/cTt	-	ENSP=ENSP00000334319;PolyPhen=unknown(0);HGNC=PCLO	A	G/G,G/G	G	G	G	A/A,A/A	rs10487647	0.93	.	3.35	0.123	0.262	529	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.28;AMR_AF=0.02;AN=4;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=3.35;HRun;HaplotypeScore=0.0000;MQ=39.09;MQ0=0;Map20=1;OAnc=G;QD=38.14;TS=HPGOMC;TSseq=A,G,G,G,G,N;bSC=529;mSC=0.123;pSC=0.262	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1635,126,0:0,0:0,0:24,17:0,0:0:39.09:0;1/1:33:99:1304,99,0:0,0:0,0:13,20:0,0:0:37.00:0	-
7_88423698_G/T	7	88423698	T	ENSG00000164645	ENST00000297203	Transcript	NON_SYNONYMOUS_CODING	745	559	187	K/Q	Aag/Cag	-	ENSP=ENSP00000297203;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C7orf62	G	G/G,T/T	T	T	T	H/H,A/A	.	1	.	6.16	0.834	0.064	800	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=84;GAnc=T;GRP=6.16;HRun;MQ=37.51;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=800;mSC=0.834;pSC=0.064	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:59:99:0,178,2332:0,0:0,0:23,36:0,0:0:37.51:0;1/1:25:75.25:1000,75,0:0,0:0,0:0,0:12,13:0:37.00:0	-
7_89794035_G/C	7	89794035	C	ENSG00000164647	ENST00000297205	Transcript	NON_SYNONYMOUS_CODING	1207	1007	336	S/C	tCt/tGt	-	ENSP=ENSP00000297205;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=STEAP1	G	C/C,G/G	C	C	C	A/A,H/H	.	1	.	1.7	.	0.156	562	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=108;Dels=0.00;FS=0.000;GAnc=C;GRP=1.7;HRun=0;HaplotypeScore=0.0000;MQ=39.75;MQ0=0;Map20=1;OAnc=C;QD=38.54;TS=HPGOMC;TSseq=G,C,-,C,C,C;bSC=562;pSC=0.156	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:74:99:2885,220,0:0,0:39,35:0,0:0,0:0:39.75:0;0/0:34:99:0,102,1332:0,0:0,0:18,16:0,0:0:37.00:0	+
7_91793211_A/T	7	91793211	T	ENSG00000240720	ENST00000430130	Transcript	NON_SYNONYMOUS_CODING	1380	1306	436	S/C	Agt/Tgt	-	ENSP=ENSP00000411568;PolyPhen=benign(0);SIFT=tolerated(0.98);HGNC=LRRD1	A	T/T,T/T	T	T	T	A/A,A/A	rs185155072	1.0	.	-1.1	0.174	0.886	100	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=1.235;CAnc=T;DP=91;Dels=0.00;FS=0.000;GAnc=T;GRP=-1.1;HRun=0;HaplotypeScore=0.0000;MQ=37.86;MQ0=0;MQRankSum=-1.311;Map20=1;OAnc=T;QD=36.07;ReadPosRankSum=-0.133;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=100;mSC=0.174;pSC=0.886	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:66:99:2414,116,0:0,2:0,0:0,0:18,46:0:37.86:0;1/1:25:75.25:995,75,0:0,0:0,0:0,0:9,16:0:37.00:0	-
7_99473801_A/G	7	99473801	G	ENSG00000244623	ENST00000316368	Transcript	NON_SYNONYMOUS_CODING	880	856	286	P/S	Cct/Tct	-	ENSP=ENSP00000313936;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR2AE1	A	G/G,G/G	G	G	-	A/A,A/A	rs73403577	0.94	.	2.68	0.066	0.068	351	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.26;AMR_AF=0.03;AN=4;BaseQRankSum=0.166;CAnc=G;DP=109;Dels=0.00;FS=6.491;GAnc=G;GRP=2.68;HRun;HaplotypeScore=1.9841;MQ=39.61;MQ0=0;MQRankSum=1.124;Map20=1;QD=36.50;ReadPosRankSum=-1.455;TS=HPGM;TSseq=A,G,G,C;bSC=351;mSC=0.066;pSC=0.068	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:67:99:2478,122,0:0,2:0,0:35,30:0,0:0:39.61:0;1/1:42:99:1578,123,0:0,0:0,0:21,20:1,0:0:37.00:0	-
7_100551433_T/C	7	100551433	C	ENSG00000169894	ENST00000319509	Transcript	NON_SYNONYMOUS_CODING	184	184	62	L/F	Ctt/Ttt	-	ENSP=ENSP00000324834;PolyPhen=benign(0.002);SIFT=tolerated(0.78);HGNC=MUC3A	T	C/T,C/T	C	C	C	A/H,A/H	.	1	.	-1.8	0.000	0.097	689	1	AC=2;AF=0.50;AN=4;BaseQRankSum=-0.066;CAnc=C;DP=108;Dels=0.00;FS=2.378;GAnc=C;GRP=-1.8;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-1.336;Map20=1;OAnc=C;QD=7.99;ReadPosRankSum=0.347;TS=HPGOMC;TSseq=T,C,C,-,C,-;bSC=689;mSC=0.000;pSC=0.097	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:63:99:533,0,1496:0,0:9,11:0,0:14,28:0:37.00:0;0/1:45:99:474,0,1015:0,0:11,5:0,0:15,14:0:36.32:0	+
7_100551461_C/G	7	100551461	G	ENSG00000169894	ENST00000319509	Transcript	NON_SYNONYMOUS_CODING	212	212	71	S/T	aGc/aCc	-	ENSP=ENSP00000324834;PolyPhen=benign(0.006);SIFT=tolerated(0.28);HGNC=MUC3A	C	G/C,G/C	G	G	G	A/H,A/H	.	1	.	-0.256	0.000	0.139	689	1	AC=2;AF=0.50;AN=4;BaseQRankSum=-0.690;CAnc=G;DP=111;Dels=0.00;FS=0.894;GAnc=G;GRP=-0.256;HRun=0;HaplotypeScore=2.9328;MQ=37.27;MQ0=0;MQRankSum=-2.377;Map20=1;OAnc=G;QD=10.78;ReadPosRankSum=-0.504;TS=HPGOMC;TSseq=C,G,G,-,G,-;bSC=689;mSC=0.000;pSC=0.139	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:74:99:828,0,1446:0,0:19,23:16,13:0,0:0:37.27:0;0/1:37:99:338,0,879:0,0:9,16:5,7:0,0:0:36.18:0	+
7_100551473_G/C	7	100551473	C	ENSG00000169894	ENST00000319509	Transcript	NON_SYNONYMOUS_CODING	224	224	75	P/R	cCa/cGa	-	ENSP=ENSP00000324834;PolyPhen=benign(0.002);SIFT=tolerated(0.33);HGNC=MUC3A	G	C/G,C/G	C	C	C	A/H,A/H	.	1	CpG	-0.534	0.001	0.083	689	1	AC=2;AF=0.50;AN=4;BaseQRankSum=2.798;CAnc=C;CpG;DP=136;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.534;HRun;HaplotypeScore=3.9576;MQ=37.23;MQ0=0;MQRankSum=-1.251;Map20=1;OAnc=C;QD=12.10;ReadPosRankSum=-0.782;TS=HPGOMC;TSseq=G,C,C,-,C,-;bSC=689;mSC=0.001;pSC=0.083	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:86:99:1083,0,1524:0,0:19,17:23,23:1,0:0:37.23:0;0/1:49:99:512,0,1064:0,0:6,12:13,18:0,0:0:36.17:0	+
7_100552358_C/G	7	100552358	G	ENSG00000169894	ENST00000319509	Transcript	NON_SYNONYMOUS_CODING	1109	1109	370	S/T	aGc/aCc	-	ENSP=ENSP00000324834;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=MUC3A	C	G/C,G/C	G	G	G	A/H,A/H	.	1	.	1.57	0.001	0.156	689	1	AC=2;AF=0.50;AN=4;BaseQRankSum=0.579;CAnc=G;DP=113;Dels=0.00;FS=1.939;GAnc=G;GRP=1.57;HRun=0;HaplotypeScore=0.0000;MQ=36.60;MQ0=0;MQRankSum=-1.649;Map20=1;OAnc=G;QD=10.91;ReadPosRankSum=-0.871;TS=HPGOMC;TSseq=C,G,G,G,G,N;bSC=689;mSC=0.001;pSC=0.156	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:75:99:848,0,1565:0,0:28,17:17,12:0,0:0:36.60:0;0/1:38:99:335,0,890:0,0:15,11:7,5:0,0:0:36.20:0	+
7_100552371_C/G	7	100552371	G	ENSG00000169894	ENST00000319509	Transcript	NON_SYNONYMOUS_CODING	1122	1122	374	M/I	atG/atC	-	ENSP=ENSP00000324834;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=MUC3A	C	G/C,G/C	G	G	G	A/H,A/H	.	1	.	0.637	0.000	0.099	689	1	AC=2;AF=0.50;AN=4;BaseQRankSum=0.367;CAnc=G;DP=99;Dels=0.00;FS=5.443;GAnc=G;GRP=0.637;HRun=0;HaplotypeScore=0.0000;MQ=36.55;MQ0=0;MQRankSum=-2.316;Map20=1;OAnc=G;QD=7.89;ReadPosRankSum=0.581;TS=HPGOMC;TSseq=C,G,G,G,G,N;bSC=689;mSC=0.000;pSC=0.099	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:67:99:559,0,1582:0,0:30,15:11,10:0,0:0:36.55:0;0/1:32:99:223,0,804:0,0:13,10:5,4:0,0:0:36.05:0	+
7_100552390_T/C	7	100552390	C	ENSG00000169894	ENST00000319509	Transcript	NON_SYNONYMOUS_CODING	1141	1141	381	H/Y	Cat/Tat	-	ENSP=ENSP00000324834;PolyPhen=benign(0.008);SIFT=tolerated(0.46);HGNC=MUC3A	T	C/T,C/T	C	C	T	A/H,A/H	.	1	.	-3.14	0.000	0.036	689	1	AC=2;AF=0.50;AN=4;BaseQRankSum=-0.183;CAnc=C;DP=95;Dels=0.00;FS=3.933;GAnc=C;GRP=-3.14;HRun=0;HaplotypeScore=0.9958;MQ=36.19;MQ0=0;MQRankSum=-4.336;Map20=1;OAnc=T;QD=6.26;ReadPosRankSum=-1.405;TS=HPGOMC;TSseq=T,C,C,T,T,N;bSC=689;mSC=0.000;pSC=0.036	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:63:99:424,0,1520:0,0:10,8:0,0:29,15:0:36.19:0;0/1:32:99:194,0,803:0,0:4,5:0,0:16,7:0:35.33:0	+
7_100552412_T/C	7	100552412	C	ENSG00000169894	ENST00000319509	Transcript	NON_SYNONYMOUS_CODING	1163	1163	388	T/M	aCg/aTg	-	ENSP=ENSP00000324834;PolyPhen=benign(0.002);SIFT=tolerated(0.25);HGNC=MUC3A	T	C/T,C/T	C	C	C	A/H,A/H	.	1	CpG	0.641	0.000	0.086	689	1	AC=2;AF=0.50;AN=4;BaseQRankSum=0.851;CAnc=C;CpG;DP=120;Dels=0.00;FS=2.365;GAnc=C;GRP=0.641;HRun=0;HaplotypeScore=0.0000;MQ=36.31;MQ0=0;MQRankSum=-3.305;Map20=1;OAnc=C;QD=6.92;ReadPosRankSum=-1.408;TS=HPGOMC;TSseq=T,C,C,C,C,N;bSC=689;mSC=0.000;pSC=0.086	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:66:99:487,0,1475:0,0:11,9:0,0:31,15:0:36.31:0;0/1:54:99:348,0,1379:0,0:7,8:0,0:20,19:0:36.02:0	+
7_105221847_C/G	7	105221847	G	ENSG00000185055	ENST00000460135	Transcript	NON_SYNONYMOUS_CODING	291	64	22	L/V	Ctg/Gtg	-	ENSP=ENSP00000418425;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=EFCAB10	C	C/C,G/G	G	G	-	H/H,A/A	.	1	.	-4.96	0.075	0.015	644	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=72;GAnc=G;GRP=-4.96;HRun=0;MQ=37.66;MQ0=0;Map20=1;TS=HPGMC;TSseq=C,G,A,G,G;bSC=644;mSC=0.075;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,135,1771:0,0:23,21:0,0:0,0:0:37.66:0;1/1:27:78.25:1022,78,0:0,0:0,0:11,16:0,0:0:37.00:0	-
7_107342294_T/G	7	107342294	G	ENSG00000091137	ENST00000265715	Transcript	NON_SYNONYMOUS_CODING	2050	1826	609	G/V	gGt/gTt	-	ENSP=ENSP00000265715;PolyPhen=benign(0);SIFT=tolerated(0.37);HGNC=SLC26A4	T	G/G,T/T	G	G	G	A/A,H/H	rs17154335	0.96	.	5.83	0.959	0.858	543	0.5	1000gALT=G;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.14;AMR_AF=0.02;AN=4;CAnc=G;DP=99;Dels=0.00;FS=0.000;GAnc=G;GRP=5.83;HRun;HaplotypeScore=0.0000;MQ=37.96;MQ0=0;Map20=0.5;OAnc=G;QD=38.58;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=543;mSC=0.959;pSC=0.858	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2425,187,0:0,0:0,0:33,29:0,0:0:37.96:0;0/0:37:99:0,111,1465:0,0:0,0:0,0:14,23:0:37.00:0	+
7_107756510_A/G	7	107756510	G	ENSG00000091128	ENST00000205386	Transcript	NON_SYNONYMOUS_CODING	211	131	44	T/M	aCg/aTg	-	ENSP=ENSP00000205386;PolyPhen=benign(0);SIFT=tolerated(0.59);HGNC=LAMB4	A	G/G,G/A	G	G	G	A/A,A/H	rs35644375	0.91	CpG	2.81	0.000	0.237	755	1	1000gALT=G;AC=3;AF=0.75;AF1000g=0.09;AFR_AF=0.36;AMR_AF=0.04;AN=4;BaseQRankSum=-1.578;CAnc=G;CpG;DP=75;Dels=0.00;FS=3.310;GAnc=G;GRP=2.81;HRun=0;HaplotypeScore=1.5781;MQ=38.96;MQ0=0;MQRankSum=-0.192;Map20=1;OAnc=G;QD=36.82;ReadPosRankSum=-1.424;TS=HPGOMC;TSseq=A,G,G,G,G,A;bSC=755;mSC=0.000;pSC=0.237	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:95.42:1690,95,0:0,1:0,0:24,20:0,0:0:38.96:0;0/1:30:99:500,0,473:5,9:0,0:4,11:0,1:0:37.00:0	-
7_116596678_C/G	7	116596678	G	ENSG00000214188	ENST00000397750	Transcript	NON_SYNONYMOUS_CODING	812	271	91	V/L	Gta/Cta	-	ENSP=ENSP00000380858;PolyPhen=benign(0.001);HGNC=ST7-OT4	C	G/G,C/C	G	G	G	A/A,H/H	.	1	.	-0.27	0.739	0.173	646	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=67;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.27;HRun;HaplotypeScore=0.9997;MQ=38.96;MQ0=0;Map20=1;OAnc=G;QD=37.43;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=646;mSC=0.739;pSC=0.173	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1717,132,0:0,1:0,0:22,19:0,0:0:38.96:0;0/0:22:66.22:0,66,874:0,0:11,11:0,0:0,0:0:37.00:0	+
7_130418720_A/C	7	130418720	C	ENSG00000174595	ENST00000310992	Transcript	NON_SYNONYMOUS_CODING	169	141	47	Q/H	caG/caT	-	ENSP=ENSP00000310878;PolyPhen=benign(0);SIFT=tolerated(0.1);HGNC=KLF14	A	C/C,C/C	C	C	C	A/A,A/A	.	1	CpG	-0.911	0.000	0.425	734	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=37;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.911;HRun=0;HaplotypeScore=0.0000;MQ=35.72;MQ0=0;Map20=1;OAnc=C;QD=37.13;TS=HPGOMC;TSseq=A,C,N,N,C,A;bSC=734;mSC=0.000;pSC=0.425	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:24:72.22:924,72,0:0,0:11,13:0,0:0,0:0:35.72:0;1/1:13:39.13:520,39,0:0,0:6,7:0,0:0,0:0:37.00:0	-
7_134642991_A/G	7	134642991	G	ENSG00000122786	ENST00000361388	Transcript	NON_SYNONYMOUS_CODING	1790	1324	442	V/I	Gta/Ata	-	ENSP=ENSP00000355000;PolyPhen=benign(0.08);SIFT=tolerated(1);HGNC=CALD1	A	G/G,G/G	G	G	G	A/A,A/A	rs112633425	1.0	.	5.51	.	0.961	651	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;DP=77;Dels=0.00;FS=0.000;GAnc=G;GRP=5.51;HRun=0;HaplotypeScore=0.0000;MQ=39.43;MQ0=0;Map20=1;OAnc=G;QD=38.53;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=651;pSC=0.961	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1420,108,0:0,0:0,0:15,20:0,0:0:39.43:0;1/1:41:99:1610,123,0:0,0:0,0:16,25:0,0:0:37.00:0	+
7_135269655_T/C	7	135269655	C	ENSG00000155561	ENST00000285968	Transcript	NON_SYNONYMOUS_CODING	1144	1118	373	T/M	aCg/aTg	-	ENSP=ENSP00000285968;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NUP205	T	C/C,C/C	C	C	C	A/A,A/A	rs58392569	0.96	CpG	3.68	0.972	0.902	493	0.5	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.02;AMR_AF=0.04;AN=4;ASN_AF=0.05;CAnc=C;CpG;DP=79;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=3.68;HRun=0;HaplotypeScore=1.6648;MQ=37.56;MQ0=0;Map20=0.5;OAnc=C;QD=38.74;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=493;mSC=0.972;pSC=0.902	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2086,160,0:0,0:28,25:0,0:0,0:0:37.56:0;1/1:26:78.25:1006,78,0:0,0:14,12:0,0:0,0:0:37.00:0	+
7_141734136_A/G	7	141734136	G	ENSG00000257335	ENST00000475668	Transcript	NON_SYNONYMOUS_CODING	1798	1744	582	V/I	Gtt/Att	-	ENSP=ENSP00000417515;PolyPhen=benign(0.004);SIFT=tolerated(1);HGNC=MGAM	A	A/A,G/A	G	G	G	H/H,A/H	.	1	CpG	5.21	1.000	0.924	840	1	AC=1;AF=0.25;AN=4;CAnc=G;CpG;DP=64;GAnc=G;GRP=5.21;HRun=0;MQ=38.73;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=840;mSC=1.000;pSC=0.924	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:34:99:0,99,1300:18,15:0,0:0,0:0,0:0:38.73:0;0/1:30:99:443,0,550:8,8:0,0:10,4:0,0:0:37.00:0	+
7_142428741_C/T	7	142428741	T	ENSG00000211753	ENST00000390400	Transcript	NON_SYNONYMOUS_CODING	121	101	34	M/T	aTg/aCg	-	ENSP=ENSP00000374923;PolyPhen=benign(0.338);SIFT=tolerated(0.11);HGNC=TRBV28	C	C/C,T/T	T	T	-	H/H,A/A	rs114123883	1.0	CpG	-5.19	0.000	.	895	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.02;AN=4;CAnc=T;CpG;DP=100;GAnc=T;GRP=-5.19;HRun=0;MQ=38.39;MQ0=0;Map20=1;OAnc=-;TS=HPGOMC;TSseq=C,T,T,-,-,-;bSC=895;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:64:99:0,147,2367:0,0:39,23:0,0:2,0:0:38.39:0;1/1:36:99:1440,108,0:0,0:0,0:0,0:21,15:0:37.00:0	+
7_142563253_T/G	7	142563253	G	ENSG00000106123	ENST00000392957	Transcript	NON_SYNONYMOUS_CODING	1757	970	324	A/S	Gct/Tct	-	ENSP=ENSP00000376684;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=EPHB6	T	G/G,G/G	G	G	G	A/A,A/A	rs8177146	0.95	.	4.54	0.975	0.626	678	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.15;AMR_AF=0.04;AN=4;ASN_AF=0.01;BaseQRankSum=0.578;CAnc=G;DP=68;Dels=0.00;EUR_AF=0.03;FS=3.358;GAnc=G;GRP=4.54;HRun;HaplotypeScore=1.8319;MQ=38.52;MQ0=0;MQRankSum=-0.311;Map20=1;OAnc=G;QD=35.90;ReadPosRankSum=-0.933;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=678;mSC=0.975;pSC=0.626	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:77.36:1433,77,0:0,0:0,0:17,21:1,0:0:38.52:0;1/1:29:44.26:1020,44,0:0,0:0,0:10,18:0,1:0:37.00:0	+
7_142640113_A/G	7	142640113	G	ENSG00000197993	ENST00000355265	Transcript	NON_SYNONYMOUS_CODING	2265	1790	597	P/L	cCc/cTc	-	ENSP=ENSP00000347409;PolyPhen=benign(0);SIFT=tolerated(0.31);HGNC=KEL	A	G/G,A/A	G	G	G	A/A,H/H	rs8176038	0.98	.	0.572	0.126	0.002	693	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=G;DP=60;Dels=0.00;FS=0.000;GAnc=G;GRP=0.572;HRun=2;HaplotypeScore=1.6648;MQ=38.44;MQ0=0;Map20=1;OAnc=G;QD=38.03;TS=HPGOMC;TSseq=A,G,G,G,G,A;bSC=693;mSC=0.126;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1592,123,0:0,0:0,0:17,24:0,0:0:38.44:0;0/0:19:57.18:0,57,752:9,10:0,0:0,0:0,0:0:37.00:0	-
7_146825878_G/A	7	146825878	A	ENSG00000174469	ENST00000361727	Transcript	NON_SYNONYMOUS_CODING	1549	1033	345	I/V	Atc/Gtc	-	ENSP=ENSP00000354778;PolyPhen=benign(0.001);SIFT=tolerated(0.24);HGNC=CNTNAP2	G	G/G,A/A	A	A	A	H/H,A/A	.	1	CpG	2.18	0.162	0.950	890	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=87;GAnc=A;GRP=2.18;HRun=0;MQ=39.06;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=890;mSC=0.162;pSC=0.950	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:99:0,126,2097:0,3:0,0:29,24:0,0:0:39.06:0;1/1:30:90.29:1186,90,0:15,15:0,0:0,0:0,0:0:37.00:0	+
7_154379570_C/T	7	154379570	T	ENSG00000130226	ENST00000406326	Transcript	NON_SYNONYMOUS_CODING	1241	838	280	S/P	Tct/Cct	-	ENSP=ENSP00000384393;PolyPhen=unknown(0);HGNC=DPP6	C	T/T,C/C	T	T	T	A/A,H/H	rs79320411	0.99	.	0.59	0.002	0.057	994	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=T;DP=60;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=0.59;HRun=0;HaplotypeScore=0.0000;MQ=38.52;MQ0=0;Map20=1;OAnc=T;QD=35.52;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=994;mSC=0.002;pSC=0.057	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1418,108,0:0,0:0,0:0,0:22,17:0:38.52:0;0/0:21:63.20:0,63,831:0,0:7,14:0,0:0,0:0:37.00:0	+
7_154379742_G/T	7	154379742	T	ENSG00000130226	ENST00000406326	Transcript	NON_SYNONYMOUS_CODING	1413	1010	337	V/G	gTg/gGg	-	ENSP=ENSP00000384393;PolyPhen=unknown(0);HGNC=DPP6	G	T/T,G/G	T	T	T	A/A,H/H	rs138763198	0.99	.	0.753	0.000	0.170	994	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=T;DP=66;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=0.753;HRun=0;HaplotypeScore=0.0000;MQ=38.52;MQ0=0;Map20=1;OAnc=T;QD=35.30;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=994;mSC=0.000;pSC=0.170	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1410,108,0:0,0:0,0:0,0:20,19:0:38.52:0;0/0:27:81.26:0,81,1071:0,0:0,0:17,10:0,0:0:37.00:0	+
8_1626466_C/T	8	1626466	T	ENSG00000198010	ENST00000356067	Transcript	NON_SYNONYMOUS_CODING	2228	2228	743	M/T	aTg/aCg	-	ENSP=ENSP00000348366;PolyPhen=benign(0.012);SIFT=tolerated(0.51);HGNC=DLGAP2	C	C/C,T/C	T	T	T	H/H,A/H	.	1	CpG	-7.58	0.003	0.903	929	1	AC=1;AF=0.25;AN=4;CAnc=T;CpG;DP=73;GAnc=T;GRP=-7.58;HRun=0;MQ=39.09;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=929;mSC=0.003;pSC=0.903	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,126,1627:0,0:22,19:0,0:0,0:0:39.09:0;0/1:31:99:526,0,507:0,0:7,8:0,0:9,7:0:37.00:0	+
8_8869129_T/G	8	8869129	G	ENSG00000104626	ENST00000250263	Transcript	NON_SYNONYMOUS_CODING	625	365	122	C/F	tGt/tTt	-	ENSP=ENSP00000250263;PolyPhen=benign(0);SIFT=tolerated(0.1);HGNC=ERI1	T	G/G,G/G	G	G	G	A/A,A/A	rs112570397	1.0	.	1.69	.	.	856	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.02;AN=4;BaseQRankSum=-0.577;CAnc=G;DP=97;Dels=0.00;FS=0.000;GAnc=G;GRP=1.69;HRun=0;HaplotypeScore=2.9953;MQ=37.87;MQ0=0;MQRankSum=-1.611;Map20=1;OAnc=G;QD=36.48;ReadPosRankSum=1.489;TS=HPGOMC;TSseq=T,G,G,G,N,G;bSC=856	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2112,132,0:0,0:0,0:29,27:1,0:0:37.87:0;1/1:40:99:1564,120,0:0,0:0,0:16,24:0,0:0:37.00:0	+
8_10468685_A/T	8	10468685	T	ENSG00000183638	ENST00000382483	Transcript	NON_SYNONYMOUS_CODING	3147	2923	975	M/L	Atg/Ttg	-	ENSP=ENSP00000371923;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=RP1L1	A	A/A,T/T	T	T	T	H/H,A/A	rs146002320	1.0	.	3.55	.	.	923	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=T;DP=55;GAnc=T;GRP=3.55;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=923	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:35:99:0,99,1278:16,19:0,0:0,0:0,0:0:37.00:0;1/1:20:57.19:754,57,0:0,0:0,0:0,0:12,8:0:37.00:0	-
8_10469143_C/T	8	10469143	T	ENSG00000183638	ENST00000382483	Transcript	NON_SYNONYMOUS_CODING	2689	2465	822	Q/R	cAa/cGa	-	ENSP=ENSP00000371923;PolyPhen=benign(0.006);SIFT=tolerated(0.53);HGNC=RP1L1	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	-1.53	.	.	923	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=51;GAnc=T;GRP=-1.53;HRun=2;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=923	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:34:99:0,99,1320:0,0:16,17:0,0:1,0:0:37.00:0;1/1:17:51.16:663,51,0:0,0:0,0:0,0:11,6:0:37.00:0	-
8_10470427_A/G	8	10470427	G	ENSG00000183638	ENST00000382483	Transcript	NON_SYNONYMOUS_CODING	1405	1181	394	A/V	gCc/gTc	-	ENSP=ENSP00000371923;PolyPhen=benign(0.005);SIFT=tolerated(1);HGNC=RP1L1	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	2.54	.	.	923	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=54;GAnc=G;GRP=2.54;HRun;MQ=38.37;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=923	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:99:0,105,1386:17,19:0,0:0,0:0,0:0:38.37:0;1/1:18:54.16:691,54,0:0,0:0,0:13,5:0,0:0:37.00:0	-
8_11418322_T/G	8	11418322	G	ENSG00000136573	ENST00000526097	Transcript	NON_SYNONYMOUS_CODING	481	49	17	G/C	Ggt/Tgt	-	ENSP=ENSP00000433150;PolyPhen=unknown(0);HGNC=BLK	T	G/G,T/T	G	G	G	A/A,H/H	rs73545875	0.98	RM	-1.61	.	.	928	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.09;AN=4;BaseQRankSum=1.529;CAnc=G;DP=57;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=-1.61;HRun;HaplotypeScore=1.8914;MQ=37.59;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=G;QD=36.10;RM;ReadPosRankSum=-1.529;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=928	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:70.77:1260,71,0:0,0:0,0:17,15:1,0:0:37.59:0;0/0:23:69.22:0,69,897:0,0:0,0:0,0:11,12:0:37.00:0	+
8_13356621_T/G	8	13356621	G	ENSG00000164741	ENST00000276297	Transcript	NON_SYNONYMOUS_CODING	1370	960	320	H/Q	caC/caA	-	ENSP=ENSP00000276297;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DLC1	T	G/G,T/T	G	G	G	A/A,H/H	rs34591797	0.96	.	1.12	0.167	0.872	802	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;CAnc=G;DP=80;Dels=0.00;FS=0.000;GAnc=G;GRP=1.12;HRun=0;HaplotypeScore=0.0000;MQ=38.01;MQ0=0;Map20=1;OAnc=G;QD=37.70;TS=HPGOMC;TSseq=T,G,A,G,G,G;bSC=802;mSC=0.167;pSC=0.872	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2258,175,0:0,1:0,0:24,34:0,0:0:38.01:0;0/0:21:63.21:0,63,836:0,0:0,0:0,0:10,11:0:37.00:0	-
8_17612872_C/T	8	17612872	T	ENSG00000129422	ENST00000262102	Transcript	NON_SYNONYMOUS_CODING	670	445	149	T/A	Aca/Gca	-	ENSP=ENSP00000262102;PolyPhen=benign(0.001);SIFT=tolerated(0.51);HGNC=MTUS1	C	T/T,T/T	T	T	T	A/A,A/A	rs61733701	0.98	.	-6.69	0.000	0.106	716	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=T;DP=76;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=-6.69;HRun=0;HaplotypeScore=0.0000;MQ=38.24;MQ0=0;Map20=1;OAnc=T;QD=37.17;TS=HPGOMC;TSseq=C,N,T,T,T,T;bSC=716;mSC=0.000;pSC=0.106	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1817,138,0:0,0:0,0:0,0:19,29:0:38.24:0;1/1:28:84.27:1110,84,0:0,0:0,0:0,0:17,11:0:37.00:0	-
8_18080001_G/A	8	18080001	A	ENSG00000171428	ENST00000307719	Transcript	NON_SYNONYMOUS_CODING	618	445	149	I/V	Atc/Gtc	-	ENSP=ENSP00000307218;PolyPhen=benign(0.005);SIFT=tolerated(1);HGNC=NAT1	G	A/A,G/G	A	A	A	A/A,H/H	rs4987076	0.98	.	0.345	0.009	.	923	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;BaseQRankSum=0.901;CAnc=A;DP=82;Dels=0.00;EUR_AF=0.03;FS=3.100;GAnc=A;GRP=0.345;HRun=0;HaplotypeScore=1.9944;MQ=37.36;MQ0=0;MQRankSum=-0.485;Map20=1;OAnc=A;QD=32.41;ReadPosRankSum=0.901;TS=HPGOM;TSseq=G,A,A,A,A;bSC=923;mSC=0.009	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:1816,107,0:25,26:0,0:0,1:0,0:0:37.36:0;0/0:27:81.26:0,81,1067:0,0:0,0:17,10:0,0:0:37.00:0	+
8_18080196_T/G	8	18080196	G	ENSG00000171428	ENST00000307719	Transcript	NON_SYNONYMOUS_CODING	813	640	214	A/S	Gca/Tca	-	ENSP=ENSP00000307218;PolyPhen=benign(0.001);SIFT=tolerated(0.94);HGNC=NAT1	T	G/G,T/T	G	G	G	A/A,H/H	rs4986783	0.98	.	-5.9	0.001	.	923	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;BaseQRankSum=0.000;CAnc=G;DP=74;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=-5.9;HRun=0;HaplotypeScore=3.9989;MQ=37.46;MQ0=0;MQRankSum=-0.953;Map20=1;OAnc=G;QD=35.81;ReadPosRankSum=-0.606;TS=HPGOM;TSseq=T,G,G,G,G;bSC=923;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:80.38:1501,80,0:0,0:0,1:14,24:0,1:0:37.46:0;0/0:33:99:0,99,1297:0,0:0,0:0,0:13,20:0:37.00:0	+
8_19316070_T/C	8	19316070	C	ENSG00000147408	ENST00000311540	Transcript	NON_SYNONYMOUS_CODING	1175	718	240	V/I	Gtc/Atc	-	ENSP=ENSP00000310891;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=CSGALNACT1	T	C/C,C/C	C	C	C	A/A,A/A	.	1.0	CpG	2.85	0.022	0.703	862	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-0.203;CAnc=C;CpG;DP=96;Dels=0.00;FS=0.000;GAnc=C;GRP=2.85;HRun=0;HaplotypeScore=2.5739;MQ=39.01;MQ0=0;MQRankSum=0.976;Map20=1;OAnc=C;QD=35.82;ReadPosRankSum=1.787;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=862;mSC=0.022;pSC=0.703	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2469,122,0:0,0:30,35:0,0:2,1:0:39.01:0;1/1:28:84.27:1106,84,0:0,0:16,12:0,0:0,0:0:37.00:0	-
8_21976710_T/C	8	21976710	C	ENSG00000168453	ENST00000312841	Transcript	NON_SYNONYMOUS_CODING	3729	3064	1022	A/T	Gca/Aca	-	ENSP=ENSP00000326765;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=HR	T	C/C,C/C	C	C	C	A/A,A/A	rs7014851	0.92	CpG	4.29	0.051	0.251	537	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.28;AMR_AF=0.04;AN=4;CAnc=C;CpG;DP=49;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=4.29;HRun=0;HaplotypeScore=1.9662;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.56;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=537;mSC=0.051;pSC=0.251	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.31:1267,96,0:0,0:16,16:0,0:0,0:0:37.00:0;1/1:17:51.17:680,51,0:0,0:5,12:0,0:0,0:0:37.00:0	-
8_22020180_A/G	8	22020180	G	ENSG00000168484	ENST00000318561	Transcript	NON_SYNONYMOUS_CODING	310	136	46	V/I	Gtc/Atc	-	ENSP=ENSP00000316152;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SFTPC	A	A/A,G/G	G	G	G	H/H,A/A	.	1	CpG	3.51	0.968	0.837	809	1	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=61;GAnc=G;GRP=3.51;HRun=0;MQ=36.75;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,-,G,G,G;bSC=809;mSC=0.968;pSC=0.837	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:90.76:0,91,1493:19,20:1,0:0,0:0,0:0:36.75:0;1/1:21:57.19:754,57,0:0,0:0,0:8,12:0,1:0:37.00:0	+
8_22422805_G/A	8	22422805	A	ENSG00000120896	ENST00000240123	Transcript	NON_SYNONYMOUS_CODING	1224	841	281	K/E	Aag/Gag	-	ENSP=ENSP00000240123;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SORBS3	G	G/G,A/A	A	A	A	H/H,A/A	rs137860983	0.99	CpG	3.31	1.000	0.943	740	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=A;CpG;DP=42;GAnc=A;GRP=3.31;HRun;MQ=39.02;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=740;mSC=1.000;pSC=0.943	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:28:84.27:0,84,1122:0,0:0,0:9,19:0,0:0:39.02:0;1/1:13:39.13:520,39,0:8,5:0,0:0,0:0,0:0:37.00:0	+
8_23003393_C/T	8	23003393	T	ENSG00000173530	ENST00000312584	Transcript	NON_SYNONYMOUS_CODING	619	524	175	Q/R	cAg/cGg	-	ENSP=ENSP00000310263;PolyPhen=benign(0);SIFT=tolerated(0.16);HGNC=TNFRSF10D	C	T/C,T/C	T	T	C	A/H,A/H	.	1.0	CpG	-2.88	0.000	.	923	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AN=4;BaseQRankSum=-0.024;CAnc=T;CpG;DP=102;Dels=0.00;FS=1.087;GAnc=T;GRP=-2.88;HRun=0;HaplotypeScore=0.9997;MQ=35.25;MQ0=0;MQRankSum=2.586;Map20=1;OAnc=C;QD=22.22;ReadPosRankSum=0.248;TS=HPGOM;TSseq=C,T,T,C,-;bSC=923;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:59:99:1341,0,525:0,0:6,13:0,0:17,22:0:35.25:0;0/1:43:99:1044,0,344:0,0:12,1:0,0:18,12:0:36.29:0	-
8_24207438_G/A	8	24207438	A	ENSG00000042980	ENST00000265769	Transcript	NON_SYNONYMOUS_CODING	2162	2052	684	I/M	atA/atG	-	ENSP=ENSP00000265769;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ADAM28	G	A/A,A/A	A	A	A	A/A,A/A	rs7829965	0.93	.	-0.579	0.159	0.148	824	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.15;AMR_AF=0.02;AN=4;ASN_AF=0.10;CAnc=A;DP=69;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=-0.579;HRun=0;HaplotypeScore=0.0000;MQ=38.91;MQ0=0;Map20=1;OAnc=A;QD=36.90;TS=HPGOMC;TSseq=G,A,A,-,A,A;bSC=824;mSC=0.159;pSC=0.148	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1546,117,0:25,16:0,0:0,0:0,0:0:38.91:0;1/1:28:84.27:1106,84,0:18,10:0,0:0,0:0,0:0:37.00:0	+
8_25361033_A/G	8	25361033	G	ENSG00000184661	ENST00000330560	Transcript	NON_SYNONYMOUS_CODING	2293	1816	606	V/I	Gtt/Att	-	ENSP=ENSP00000328228;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CDCA2	A	G/G,A/A	G	G	G	A/A,H/H	.	1.0	CpG	1.03	0.000	0.041	439	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;BaseQRankSum=1.757;CAnc=G;CpG;DP=74;Dels=0.00;FS=0.000;GAnc=G;GRP=1.03;HRun=0;HaplotypeScore=1.9995;MQ=38.19;MQ0=0;MQRankSum=-1.430;Map20=1;OAnc=G;QD=34.01;ReadPosRankSum=-0.041;TS=HPGOMC;TSseq=A,G,A,G,G,G;bSC=439;mSC=0.000;pSC=0.041	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:30.47:1733,30,0:1,2:0,0:15,31:0,0:0:38.19:0;0/0:24:72.23:0,72,949:9,15:0,0:0,0:0,0:0:37.00:0	+
8_25364101_G/C	8	25364101	C	ENSG00000184661	ENST00000330560	Transcript	NON_SYNONYMOUS_CODING	2396	1919	640	P/R	cCt/cGt	-	ENSP=ENSP00000328228;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CDCA2	G	C/C,G/G	C	C	C	A/A,H/H	rs113799371	1.0	CpG	3.36	0.008	0.487	437	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;BaseQRankSum=1.516;CAnc=C;CpG;DP=102;Dels=0.00;FS=3.222;GAnc=C;GRP=3.36;HRun;HaplotypeScore=1.9971;MQ=40.16;MQ0=0;MQRankSum=-0.271;Map20=1;OAnc=C;QD=36.58;ReadPosRankSum=-0.974;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=437;mSC=0.008;pSC=0.487	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2374,158,0:0,0:32,30:0,1:0,0:0:40.16:0;0/0:38:71.32:0,71,1336:0,1:0,0:20,17:0,0:0:36.73:0	+
8_30557599_C/T	8	30557599	T	ENSG00000104687	ENST00000221130	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	785	694	232	S/G	Agc/Ggc	-	ENSP=ENSP00000221130;PolyPhen=benign(0.002);SIFT=tolerated(0.32);HGNC=GSR	C	T/T,T/T	T	T	T	A/A,A/A	rs8190976	1.0	CpG	-11.1	0.001	0.102	749	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=T;CpG;DP=77;Dels=0.00;FS=0.000;GAnc=T;GRP=-11.1;HRun=0;HaplotypeScore=0.9997;MQ=37.68;MQ0=0;Map20=1;OAnc=T;QD=38.05;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=749;mSC=0.001;pSC=0.102	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1707,129,0:0,0:0,0:0,0:22,22:0:37.68:0;1/1:33:99:1286,99,0:0,0:0,0:0,0:17,16:0:37.00:0	-
8_32505615_G/C	8	32505615	C	ENSG00000157168	ENST00000520502	Transcript	NON_SYNONYMOUS_CODING	379	379	127	P/A	Cca/Gca	-	ENSP=ENSP00000433289;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NRG1	G	C/C,G/G	C	C	C	A/A,H/H	rs34822181	0.99	CpG	4.27	1.000	0.825	718	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=73;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=4.27;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.55;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=718;mSC=1.000;pSC=0.825	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1922,147,0:0,0:18,31:0,0:0,0:0:37.00:0;0/0:24:35.25:0,35,859:0,1:0,0:10,13:0,0:0:37.00:0	+
8_37730017_G/A	8	37730017	A	ENSG00000156675	ENST00000330843	Transcript	NON_SYNONYMOUS_CODING	2316	2303	768	V/A	gTt/gCt	-	ENSP=ENSP00000331342;PolyPhen=benign(0);SIFT=tolerated(0.47);HGNC=RAB11FIP1	G	A/A,A/A	A	A	A	A/A,A/A	rs16887092	0.91	.	-4.62	0.000	0.196	735	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.36;AMR_AF=0.04;AN=4;BaseQRankSum=0.301;CAnc=A;DP=74;Dels=0.00;FS=3.203;GAnc=A;GRP=-4.62;HRun;HaplotypeScore=0.9997;MQ=38.24;MQ0=0;MQRankSum=1.506;Map20=1;OAnc=A;QD=35.37;ReadPosRankSum=-1.732;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=735;mSC=0.000;pSC=0.196	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:98.44:1731,98,0:21,26:0,0:1,0:0,0:0:38.24:0;1/1:26:78.25:1026,78,0:13,13:0,0:0,0:0,0:0:37.00:0	-
8_39537618_C/T	8	39537618	T	ENSG00000168619	ENST00000265707	Transcript	NON_SYNONYMOUS_CODING	1739	1694	565	V/A	gTt/gCt	-	ENSP=ENSP00000265707;PolyPhen=benign(0);SIFT=tolerated(0.33);HGNC=ADAM18	C	T/T,T/T	T	T	T	A/A,A/A	.	1	.	0.112	0.000	0.016	768	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=90;Dels=0.00;FS=0.000;GAnc=T;GRP=0.112;HRun;HaplotypeScore=0.9997;MQ=38.37;MQ0=0;Map20=1;OAnc=T;QD=38.16;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=768;mSC=0.000;pSC=0.016	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2513,193,0:0,0:0,0:0,0:41,24:0:38.37:0;1/1:25:75.24:989,75,0:0,0:0,0:0,0:18,7:0:37.00:0	+
8_39564352_G/A	8	39564352	A	ENSG00000168619	ENST00000265707	Transcript	NON_SYNONYMOUS_CODING	1991	1946	649	K/R	aAa/aGa	-	ENSP=ENSP00000265707;PolyPhen=benign(0);SIFT=tolerated(0.68);HGNC=ADAM18	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	-1.66	0.002	0.628	793	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.424;CAnc=A;DP=90;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.66;HRun;HaplotypeScore=0.9995;MQ=39.53;MQ0=0;MQRankSum=1.655;Map20=1;OAnc=A;QD=36.25;ReadPosRankSum=-0.038;TS=HPGOMC;TSseq=G,A,A,A,A,G;bSC=793;mSC=0.002;pSC=0.628	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:97.64:1701,98,0:22,23:0,0:1,0:0,0:0:39.53:0;1/1:44:99:1743,132,0:25,19:0,0:0,0:0,0:0:37.00:0	+
8_51465651_C/G	8	51465651	G	ENSG00000147481	ENST00000276467	Transcript	NON_SYNONYMOUS_CODING	748	722	241	S/T	aGt/aCt	-	ENSP=ENSP00000276467;PolyPhen=benign(0.094);SIFT=tolerated(0.95);HGNC=SNTG1	C	G/G,C/C	G	G	G	A/A,H/H	rs113805699	0.99	.	5.2	1.000	0.503	912	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=G;DP=83;Dels=0.00;FS=0.000;GAnc=G;GRP=5.2;HRun=0;HaplotypeScore=0.0000;MQ=38.10;MQ0=0;Map20=1;OAnc=G;QD=38.92;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=912;mSC=1.000;pSC=0.503	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2135,163,0:0,0:0,0:28,26:0,0:0:38.10:0;0/0:29:87.28:0,87,1135:0,0:19,10:0,0:0,0:0:37.00:0	+
8_53568742_C/T	8	53568742	T	ENSG00000023287	ENST00000025008	Transcript	NON_SYNONYMOUS_CODING	4171	3647	1216	K/R	aAa/aGa	-	ENSP=ENSP00000025008;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RB1CC1	C	T/T,T/T	T	T	T	A/A,A/A	.	1	.	3.97	0.992	0.557	427	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=92;Dels=0.00;FS=0.000;GAnc=T;GRP=3.97;HRun;HaplotypeScore=0.0000;MQ=39.47;MQ0=0;Map20=1;OAnc=T;QD=37.62;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=427;mSC=0.992;pSC=0.557	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2252,172,0:0,0:0,0:0,0:23,36:0:39.47:0;1/1:33:99:1305,99,0:0,0:0,0:0,0:13,20:0:37.00:0	-
8_54975904_C/T	8	54975904	T	ENSG00000120992	ENST00000316963	Transcript	NON_SYNONYMOUS_CODING	393	199	67	M/V	Atg/Gtg	-	ENSP=ENSP00000320043;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=LYPLA1	C	T/T,T/T	T	T	T	A/A,A/A	.	1	CpG	5.15	1.000	0.590	683	1	AC=4;AF=1.00;AN=4;CAnc=T;CpG;DP=78;Dels=0.00;FS=0.000;GAnc=T;GRP=5.15;HRun=0;HaplotypeScore=0.0000;MQ=40.28;MQ0=0;Map20=1;OAnc=T;QD=36.68;TS=HPGOM;TSseq=C,T,T,T,T;bSC=683;mSC=1.000;pSC=0.590	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1647,126,0:0,0:0,0:0,0:19,25:0:40.28:0;1/1:34:99:1322,102,0:0,0:0,0:0,0:16,18:0:37.00:0	-
8_62519812_A/G	8	62519812	G	ENSG00000198363	ENST00000522919	Transcript	NON_SYNONYMOUS_CODING	485	485	162	T/M	aCg/aTg	-	ENSP=ENSP00000430516;PolyPhen=unknown(0);HGNC=ASPH	A	A/A,G/G	G	G	G	H/H,A/A	.	1	CpG	-3.19	0.000	0.040	837	1	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=84;GAnc=G;GRP=-3.19;HRun=0;MQ=39.51;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=837;mSC=0.000;pSC=0.040	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:58:99:0,169,2198:36,22:0,0:0,0:0,0:0:39.51:0;1/1:26:78.25:1019,78,0:0,0:0,0:8,18:0,0:0:37.00:0	-
8_92378897_G/A	8	92378897	A	ENSG00000147606	ENST00000276609	Transcript	NON_SYNONYMOUS_CODING	1817	1578	526	I/M	atA/atG	-	ENSP=ENSP00000276609;PolyPhen=benign(0);SIFT=tolerated(0.88);HGNC=SLC26A7	G	G/G,A/A	A	A	A	H/H,A/A	.	1	.	4.1	0.999	0.971	730	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=97;GAnc=A;GRP=4.1;HRun;MQ=37.99;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=730;mSC=0.999;pSC=0.971	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:60:99:0,181,2381:0,0:0,0:28,32:0,0:0:37.99:0;1/1:37:99:1459,111,0:15,22:0,0:0,0:0,0:0:37.00:0	+
8_92401602_A/C	8	92401602	C	ENSG00000147606	ENST00000276609	Transcript	NON_SYNONYMOUS_CODING	1951	1712	571	S/Y	tCt/tAt	-	ENSP=ENSP00000276609;PolyPhen=benign(0);SIFT=tolerated(0.91);HGNC=SLC26A7	A	A/A,C/C	C	C	C	H/H,A/A	rs34411388	0.99	.	2.75	0.056	0.790	746	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=C;DP=93;GAnc=C;GRP=2.75;HRun=0;MQ=38.41;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=746;mSC=0.056;pSC=0.790	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:63:99:0,187,2441:21,40:0,0:0,0:0,0:0:38.41:0;1/1:30:90.29:1173,90,0:0,0:13,17:0,0:0,0:0:37.00:0	+
8_100791156_T/C	8	100791156	C	ENSG00000132549	ENST00000357162	Transcript	NON_SYNONYMOUS_CODING	7787	7676	2559	A/V	gCg/gTg	-	ENSP=ENSP00000349685;PolyPhen=benign(0.001);SIFT=tolerated(0.41);HGNC=VPS13B	T	C/C,C/C	C	C	T	A/A,A/A	rs7833870	0.91	CpG	-7.94	0.000	0.602	257	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.22;AMR_AF=0.06;AN=4;ASN_AF=0.05;CAnc=C;CpG;DP=90;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-7.94;HRun=0;HaplotypeScore=1.9968;MQ=39.13;MQ0=0;Map20=1;OAnc=T;QD=37.86;TS=HPGOMC;TSseq=T,C,C,T,T,T;bSC=257;mSC=0.000;pSC=0.602	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2115,163,0:0,0:23,31:0,0:1,0:0:39.13:0;1/1:35:72.84:1313,73,0:0,0:16,18:0,0:1,0:0:37.00:0	+
8_101620783_G/T	8	101620783	T	ENSG00000174226	ENST00000311812	Transcript	NON_SYNONYMOUS_CODING	771	620	207	D/A	gAt/gCt	-	ENSP=ENSP00000312368;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SNX31	G	G/G,T/G	T	T	T	H/H,A/H	rs149348754	1.0	.	6.16	0.981	0.661	906	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=T;DP=85;GAnc=T;GRP=6.16;HRun=0;MQ=38.24;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=906;mSC=0.981;pSC=0.661	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,144,1889:0,0:0,0:28,20:0,0:0:38.24:0;0/1:37:99:787,0,404:0,0:0,0:7,6:11,13:0:37.00:0	-
8_121467738_A/G	8	121467738	G	ENSG00000172167	ENST00000305949	Transcript	NON_SYNONYMOUS_CODING	593	548	183	C/Y	tGt/tAt	-	ENSP=ENSP00000303398;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MTBP	A	G/G,G/A	G	G	G	A/A,A/H	rs78433859	0.99	.	5.58	0.997	0.948	416	1	1000gALT=G;AC=3;AF=0.75;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=5.58;HRun=0;HaplotypeScore=0.0000;MQ=39.14;MQ0=0;Map20=1;OAnc=G;QD=38.78;TS=HPGOMC;TSseq=A,G,G,-,G,G;bSC=416;mSC=0.997;pSC=0.948	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1623,123,0:0,0:0,0:20,21:0,0:0:39.14:0;0/1:34:99:374,0,778:14,8:0,0:5,7:0,0:0:37.00:0	+
8_125989852_A/T	8	125989852	T	ENSG00000180938	ENST00000319286	Transcript	NON_SYNONYMOUS_CODING	1496	1342	448	C/S	Tgc/Agc	-	ENSP=ENSP00000319305;PolyPhen=benign(0.001);SIFT=tolerated(0.4);HGNC=ZNF572	A	T/T,T/T	T	T	T	A/A,A/A	rs10107774	0.94	RM	2.23	0.135	0.977	669	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.21;AMR_AF=0.05;AN=4;BaseQRankSum=0.601;CAnc=T;DP=92;Dels=0.00;EUR_AF=0.02;FS=3.285;GAnc=T;GRP=2.23;HRun=0;HaplotypeScore=1.9995;MQ=38.14;MQ0=0;MQRankSum=0.318;Map20=1;OAnc=T;QD=34.96;RM;ReadPosRankSum=1.308;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=669;mSC=0.135;pSC=0.977	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1851,107,0:0,1:0,0:0,0:29,22:0:38.14:0;1/1:40:99:1598,120,0:0,0:0,0:0,0:19,21:0:37.00:0	+
8_141744850_C/G	8	141744850	G	ENSG00000169398	ENST00000342207	Transcript	NON_SYNONYMOUS_CODING	1608	1608	536	S/R	agC/agG	-	ENSP=ENSP00000342839;PolyPhen=unknown(0);SIFT=tolerated(0.09);HGNC=PTK2	C	G/G,G/G	G	G	G	A/A,A/A	.	1	RM	1.64	0.000	0.258	653	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=80;Dels=0.00;FS=0.000;GAnc=G;GRP=1.64;HRun;HaplotypeScore=0.0000;MQ=38.70;MQ0=0;Map20=1;OAnc=G;QD=37.59;RM;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=653;mSC=0.000;pSC=0.258	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1988,153,0:0,0:0,0:32,19:0,1:0:38.70:0;1/1:28:84.27:1110,84,0:0,0:0,0:15,13:0,0:0:37.00:0	-
8_145139325_G/C	8	145139325	C	ENSG00000197858	ENST00000355091	Transcript	NON_SYNONYMOUS_CODING	944	823	275	Q/E	Cag/Gag	-	ENSP=ENSP00000347206;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=GPAA1	G	C/C,C/C	C	C	C	A/A,A/A	rs112703109	0.99	CpG	4.52	.	0.041	408	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=60;Dels=0.00;FS=0.000;GAnc=C;GRP=4.52;HRun=3;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.34;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=408;pSC=0.041	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:93.30:1228,93,0:0,0:17,15:0,0:0,0:0:37.00:0;1/1:28:84.27:1109,84,0:0,0:9,19:0,0:0,0:0:37.00:0	+
8_145723515_T/C	8	145723515	C	ENSG00000255182	ENST00000532766	Transcript	NON_SYNONYMOUS_CODING	584	290	97	G/E	gGa/gAa	-	ENSP=ENSP00000435686;PolyPhen=benign(0)	T	C/C,C/C	C	C	C	A/A,A/A	rs117182989	1.0	.	0.235	0.000	0.273	400	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=61;Dels=0.00;FS=0.000;GAnc=C;GRP=0.235;HRun=2;HaplotypeScore=1.9995;MQ=37.79;MQ0=0;Map20=1;OAnc=C;QD=38.03;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=400;mSC=0.000;pSC=0.273	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1478,111,0:0,1:19,18:0,0:0,0:0:37.79:0;1/1:23:69.23:920,69,0:0,0:14,9:0,0:0,0:0:37.00:0	-
8_145730809_G/T	8	145730809	T	ENSG00000167701	ENST00000394955	Transcript	NON_SYNONYMOUS_CODING	899	676	226	C/G	Tgc/Ggc	-	ENSP=ENSP00000378408;PolyPhen=benign(0);SIFT=tolerated(0.16);HGNC=GPT	G	T/T,T/T	T	T	T	A/A,A/A	rs141187317	1.0	.	-4.12	0.001	0.058	374	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=1.617;CAnc=T;DP=42;Dels=0.00;FS=0.000;GAnc=T;GRP=-4.12;HRun=0;HaplotypeScore=1.9939;MQ=37.00;MQ0=0;MQRankSum=-1.502;Map20=1;OAnc=T;QD=34.68;ReadPosRankSum=1.617;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=374;mSC=0.001;pSC=0.058	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:61.64:1108,62,0:0,0:0,0:1,0:18,12:0:37.00:0;1/1:11:30.10:392,30,0:0,0:0,0:0,0:5,6:0:37.00:0	+
9_399255_G/A	9	399255	A	ENSG00000107099	ENST00000287364	Transcript	NON_SYNONYMOUS_CODING	3246	3134	1045	N/S	aAc/aGc	-	ENSP=ENSP00000287364;PolyPhen=benign(0.001);SIFT=tolerated(0.34);HGNC=DOCK8	G	A/A,A/A	A	A	A	A/A,A/A	rs34627722	0.94	.	3.69	0.998	0.655	878	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.14;AMR_AF=0.08;AN=4;CAnc=A;DP=69;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=A;GRP=3.69;HRun;HaplotypeScore=0.0000;MQ=38.80;MQ0=0;Map20=1;OAnc=A;QD=37.78;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=878;mSC=0.998;pSC=0.655	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1658,126,0:15,27:0,0:0,0:0,0:0:38.80:0;1/1:26:78.25:1018,78,0:11,15:0,0:0,0:0,0:0:37.05:0	+
9_449874_G/C	9	449874	C	ENSG00000107099	ENST00000287364	Transcript	NON_SYNONYMOUS_CODING	5924	5812	1938	P/A	Cca/Gca	-	ENSP=ENSP00000287364;PolyPhen=benign(0.001);SIFT=tolerated(0.65);HGNC=DOCK8	G	C/C,C/C	C	C	C	A/A,A/A	rs34908836	0.93	.	3.68	0.974	0.834	767	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.16;AMR_AF=0.05;AN=4;ASN_AF=0.01;BaseQRankSum=1.199;CAnc=C;DP=74;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=3.68;HRun;HaplotypeScore=0.9997;MQ=37.58;MQ0=0;MQRankSum=0.333;Map20=1;OAnc=C;QD=37.17;ReadPosRankSum=1.666;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=767;mSC=0.974;pSC=0.834	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1966,116,0:0,0:25,25:1,0:0,0:0:37.58:0;1/1:22:66.22:873,66,0:0,0:13,9:0,0:0,0:0:37.00:0	+
9_990653_G/T	9	990653	T	ENSG00000064218	ENST00000190165	Transcript	NON_SYNONYMOUS_CODING	1105	1067	356	V/G	gTg/gGg	-	ENSP=ENSP00000190165;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DMRT3	G	T/T,T/T	T	T	T	A/A,A/A	rs16927037	0.94	.	3.79	0.019	0.584	884	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.02;AMR_AF=0.09;AN=4;ASN_AF=0.08;BaseQRankSum=0.267;CAnc=T;DP=74;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=T;GRP=3.79;HRun=0;HaplotypeScore=1.9945;MQ=37.37;MQ0=0;MQRankSum=-0.995;Map20=1;OAnc=T;QD=33.81;ReadPosRankSum=-0.121;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=884;mSC=0.019;pSC=0.584	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:83.07:1859,83,0:0,0:0,0:1,1:21,31:0:37.37:0;1/1:20:60.20:795,60,0:0,0:0,0:0,0:8,12:0:37.00:0	+
9_2729705_T/C	9	2729705	C	ENSG00000168263	ENST00000382082	Transcript	NON_SYNONYMOUS_CODING	1854	1616	539	P/L	cCc/cTc	-	ENSP=ENSP00000371514;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KCNV2	T	C/C,C/C	C	C	C	A/A,A/A	rs112673841	0.92	.	3.52	0.057	0.599	899	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.12;AMR_AF=0.04;AN=4;ASN_AF=0.07;BaseQRankSum=-0.634;CAnc=C;DP=72;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=C;GRP=3.52;HRun;HaplotypeScore=0.9958;MQ=37.97;MQ0=0;MQRankSum=0.972;Map20=1;OAnc=C;QD=35.98;ReadPosRankSum=0.296;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=899;mSC=0.057;pSC=0.599	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:83.37:1508,83,0:0,0:21,19:0,0:1,0:0:37.97:0;1/1:31:90.29:1187,90,0:0,0:20,11:0,0:0,0:0:37.00:0	+
9_6328947_T/C	9	6328947	C	ENSG00000170777	ENST00000314556	Transcript	NON_SYNONYMOUS_CODING	544	352	118	F/L	Ttc/Ctc	-	ENSP=ENSP00000318665;PolyPhen=possibly_damaging(0.886);SIFT=deleterious(0);HGNC=TPD52L3	C	T/T,T/T	T	T	T	A/A,A/A	rs3847262	0.94	.	4.41	0.003	0.156	674	1	1000gALT=C;AC=0;AF=0.00;AF1000g=0.94;AFR_AF=0.80;AMR_AF=0.95;AN=4;ASN_AF=1.00;CAnc=T;DP=93;EUR_AF=0.97;GAnc=T;GRP=4.41;MQ=38.06;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=T,T,T,T,T,-;bSC=674;mSC=0.003;pSC=0.156	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:56:99:0,129,2105:0,0:0,1:0,0:28,26:0:38.06:0;0/0:37:99:0,111,1444:0,0:0,0:0,0:22,15:0:37.00:0	+
9_6606647_G/A	9	6606647	A	ENSG00000178445	ENST00000321612	Transcript	NON_SYNONYMOUS_CODING	809	658	220	F/L	Ttc/Ctc	-	ENSP=ENSP00000370737;PolyPhen=benign(0.007);SIFT=tolerated(1);HGNC=GLDC	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	5.22	0.990	0.646	824	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.213;CAnc=A;DP=56;Dels=0.00;FS=0.000;GAnc=A;GRP=5.22;HRun=3;HaplotypeScore=1.6609;MQ=36.88;MQ0=0;MQRankSum=0.520;Map20=1;OAnc=A;QD=33.54;ReadPosRankSum=0.606;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=824;mSC=0.990;pSC=0.646	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:80.33:1375,80,0:22,17:0,0:1,0:0,0:0:36.88:0;1/1:16:48.15:621,48,0:8,8:0,0:0,0:0,0:0:37.00:0	-
9_15571630_T/A	9	15571630	A	ENSG00000164989	ENST00000297641	Transcript	NON_SYNONYMOUS_CODING	457	50	17	N/I	aAt/aTt	-	ENSP=ENSP00000297641;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C9orf93	T	A/A,A/A	A	A	A	A/A,A/A	rs443563	0.93	.	-7.39	0.818	0.105	626	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.21;AMR_AF=0.04;AN=4;CAnc=A;DP=86;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=A;GRP=-7.39;HRun;HaplotypeScore=0.0000;MQ=40.36;MQ0=0;Map20=1;OAnc=A;QD=37.76;TS=HPGOMC;TSseq=T,A,A,G,A,A;bSC=626;mSC=0.818;pSC=0.105	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2298,175,0:26,34:0,0:0,0:0,0:0:40.36:0;1/1:26:78.25:1028,78,0:12,14:0,0:0,0:0,0:0:37.00:0	+
9_26861106_C/T	9	26861106	T	ENSG00000120159	ENST00000333916	Transcript	NON_SYNONYMOUS_CODING	786	697	233	M/V	Atg/Gtg	-	ENSP=ENSP00000369431;PolyPhen=benign(0.058);SIFT=tolerated(0.15);HGNC=C9orf82	C	T/T,C/C	T	T	T	A/A,H/H	rs12342214	0.96	CpG	0.612	0.787	0.937	561	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.18;AMR_AF=0.01;AN=4;CAnc=T;CpG;DP=70;Dels=0.00;FS=0.000;GAnc=T;GRP=0.612;HRun=0;HaplotypeScore=0.0000;MQ=38.35;MQ0=0;Map20=1;OAnc=T;QD=37.47;TS=HPGOMC;TSseq=C,T,-,T,T,T;bSC=561;mSC=0.787;pSC=0.937	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1682,129,0:0,0:0,0:0,0:21,21:0:38.35:0;0/0:26:78.24:0,78,1010:0,0:14,12:0,0:0,0:0:37.00:0	-
9_34649442_A/G	9	34649442	G	ENSG00000213930	ENST00000378842	Transcript	NON_SYNONYMOUS_CODING	982	940	314	D/N	Gac/Aac	-	ENSP=ENSP00000368119;PolyPhen=benign(0);SIFT=tolerated(0.68);HGNC=GALT	A	G/G,A/A	G	G	G	A/A,H/H	rs2070074	0.95	.	4.4	1.000	0.791	327	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.02;AMR_AF=0.06;AN=4;ASN_AF=0.02;CAnc=G;DP=67;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=G;GRP=4.4;HRun=2;HaplotypeScore=2.9335;MQ=38.55;MQ0=0;Map20=1;OAnc=G;QD=37.39;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=327;mSC=1.000;pSC=0.791	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1454,114,0:0,0:0,0:17,20:0,0:0:38.55:0;0/0:29:87.28:0,87,1136:15,14:0,0:0,0:0,0:0:37.00:0	+
9_37744911_C/T	9	37744911	T	ENSG00000070601	ENST00000377765	Transcript	NON_SYNONYMOUS_CODING	2981	2882	961	V/A	gTt/gCt	-	ENSP=ENSP00000366995;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FRMPD1	C	C/C,T/T	T	T	T	H/H,A/A	rs73447213	0.99	.	0.0221	0.000	0.982	671	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.06;AN=4;CAnc=T;DP=75;GAnc=T;GRP=0.0221;HRun;MQ=38.88;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=671;mSC=0.000;pSC=0.982	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,141,1829:0,0:22,24:0,0:0,0:0:38.88:0;1/1:28:84.28:1118,84,0:0,0:0,0:0,0:13,15:0:37.00:0	+
9_37745678_G/A	9	37745678	A	ENSG00000070601	ENST00000377765	Transcript	NON_SYNONYMOUS_CODING	3748	3649	1217	I/V	Att/Gtt	-	ENSP=ENSP00000366995;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=FRMPD1	G	G/G,A/A	A	A	A	H/H,A/A	rs57942614	0.99	.	-3.49	0.002	0.613	671	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.06;AN=4;CAnc=A;DP=91;GAnc=A;GRP=-3.49;HRun;MQ=38.73;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,-;bSC=671;mSC=0.002;pSC=0.613	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,153,2027:0,0:0,0:23,28:0,0:0:38.73:0;1/1:40:99:1559,120,0:25,15:0,0:0,0:0,0:0:37.00:0	+
9_88842804_C/T	9	88842804	T	ENSG00000187753	ENST00000339137	Transcript	NON_SYNONYMOUS_CODING	342	208	70	T/A	Act/Gct	-	ENSP=ENSP00000344865;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C9orf153	C	T/T,T/T	T	T	T	A/A,A/A	rs73650939	0.94	CpG	-3.75	0.000	0.242	798	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.27;AMR_AF=0.03;AN=4;BaseQRankSum=1.585;CAnc=T;CpG;DP=77;Dels=0.00;FS=0.000;GAnc=T;GRP=-3.75;HRun=0;HaplotypeScore=0.9979;MQ=38.67;MQ0=0;MQRankSum=-0.922;Map20=1;OAnc=T;QD=37.15;ReadPosRankSum=1.216;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=798;mSC=0.000;pSC=0.242	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1779,109,0:0,0:0,1:0,0:21,24:0:38.67:0;1/1:30:90.28:1174,90,0:0,0:0,0:0,0:18,12:0:37.00:0	-
9_95277356_C/T	9	95277356	T	ENSG00000106823	ENST00000344604	Transcript	NON_SYNONYMOUS_CODING	761	611	204	Q/R	cAa/cGa	-	ENSP=ENSP00000344758;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ECM2	C	T/T,C/C	T	T	T	A/A,H/H	rs34758505	0.98	CpG	0.919	0.072	0.893	265	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.02;AMR_AF=0.04;AN=4;ASN_AF=0.03;CAnc=T;CpG;DP=82;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=0.919;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=37.64;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=265;mSC=0.072;pSC=0.893	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1915,147,0:0,0:0,0:0,0:17,32:0:37.00:0;0/0:32:93.30:0,93,1231:0,0:17,15:0,0:0,0:0:37.00:0	-
9_96015236_A/G	9	96015236	G	ENSG00000165238	ENST00000297954	Transcript	NON_SYNONYMOUS_CODING	1906	1906	636	V/M	Gtg/Atg	-	ENSP=ENSP00000297954;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=WNK2	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	3.65	0.998	0.721	569	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=51;GAnc=G;GRP=3.65;HRun;MQ=37.83;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=569;mSC=0.998;pSC=0.721	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:99:0,99,1294:21,14:0,0:0,0:0,0:0:37.83:0;1/1:15:45.13:578,45,0:0,0:0,0:8,7:0,0:0:37.00:0	+
9_96021553_G/C	9	96021553	C	ENSG00000165238	ENST00000297954	Transcript	NON_SYNONYMOUS_CODING	2723	2723	908	A/G	gCc/gGc	-	ENSP=ENSP00000297954;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=WNK2	G	G/G,C/C	C	C	C	H/H,A/A	rs112172724	0.98	.	4.21	0.978	0.239	553	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AN=4;CAnc=C;DP=64;GAnc=C;GRP=4.21;HRun=2;MQ=37.71;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=553;mSC=0.978;pSC=0.239	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,126,1631:0,0:0,0:28,14:0,0:0:37.71:0;1/1:22:66.22:880,66,0:0,0:14,8:0,0:0,0:0:37.00:0	+
9_99417000_C/T	9	99417000	T	ENSG00000158122	ENST00000375233	Transcript	NON_SYNONYMOUS_CODING	284	248	83	K/R	aAg/aGg	-	ENSP=ENSP00000364381;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=AAED1	C	T/T,T/T	T	-	T	A/A,A/A	rs9886834	0.94	.	-1.64	0.924	0.612	731	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.25;AMR_AF=0.02;AN=4;CAnc=T;DP=86;Dels=0.00;FS=0.000;GRP=-1.64;HRun;HaplotypeScore=0.0000;MQ=37.53;MQ0=0;Map20=1;OAnc=T;QD=38.38;TS=HPO;TSseq=C,T,T;bSC=731;mSC=0.924;pSC=0.612	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2182,166,0:0,0:0,0:0,0:34,22:0:37.53:0;1/1:30:90.29:1189,90,0:0,0:0,0:0,0:11,19:0:37.00:0	-
9_100843368_T/C	9	100843368	C	ENSG00000095380	ENST00000427646	Transcript	NON_SYNONYMOUS_CODING	298	298	100	R/C	Cgt/Tgt	-	ENSP=ENSP00000404642;PolyPhen=benign(0);SIFT=tolerated(0.08);HGNC=NANS	T	T/T,C/C	C	C	C	H/H,A/A	rs41424445	0.99	CpG	2.92	0.997	0.150	696	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=C;CpG;DP=52;GAnc=C;GRP=2.92;HRun=0;MQ=37.93;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,A,C,C,C;bSC=696;mSC=0.997;pSC=0.150	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:32:96.31:0,96,1268:0,0:0,0:0,0:13,19:0:37.93:0;1/1:20:57.18:751,57,0:0,1:7,12:0,0:0,0:0:37.00:0	+
9_111929421_G/C	9	111929421	C	ENSG00000136805	ENST00000374581	Transcript	NON_SYNONYMOUS_CODING	151	151	51	G/R	Ggg/Cgg	-	ENSP=ENSP00000363709;PolyPhen=unknown(0);SIFT=tolerated(0.11);HGNC=FRRS1L	G	C/C,C/C	C	C	C	A/A,A/A	.	1	CpG	1.43	0.020	0.444	595	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=30;Dels=0.00;FS=0.000;GAnc=C;GRP=1.43;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=35.79;TS=HPGOMC;TSseq=G,C,N,-,C,-;bSC=595;mSC=0.020;pSC=0.444	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:20:57.18:749,57,0:0,0:12,6:0,0:0,1:0:37.00:0;1/1:10:30.08:375,30,0:0,0:9,1:0,0:0,0:0:37.00:0	-
9_114145516_T/G	9	114145516	G	ENSG00000136813	ENST00000259335	Transcript	NON_SYNONYMOUS_CODING	4312	4312	1438	P/T	Ccc/Acc	-	ENSP=ENSP00000259335;PolyPhen=benign(0.027);SIFT=tolerated(0.18);HGNC=KIAA0368	T	T/T,G/G	G	G	G	H/H,A/A	.	1	.	4.65	1.000	0.683	329	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=72;GAnc=G;GRP=4.65;HRun=2;MQ=37.66;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=329;mSC=1.000;pSC=0.683	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,132,1724:0,0:0,0:0,0:26,19:0:37.66:0;1/1:27:78.24:1004,78,0:0,1:0,0:14,12:0,0:0:37.00:0	-
9_117553158_A/T	9	117553158	T	ENSG00000181634	ENST00000374044	Transcript	NON_SYNONYMOUS_CODING	1231	99	33	L/F	ttA/ttT	-	ENSP=ENSP00000363156;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TNFSF15	A	T/T,T/T	T	T	T	A/A,A/A	rs16931745	0.99	.	3	0.942	0.921	814	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.03;CAnc=T;DP=89;Dels=0.00;FS=0.000;GAnc=T;GRP=3;HRun=5;HaplotypeScore=0.0000;MQ=37.48;MQ0=0;Map20=1;OAnc=T;QD=37.56;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=814;mSC=0.942;pSC=0.921	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2362,181,0:0,0:0,0:0,0:26,36:0:37.48:0;1/1:27:81.25:1064,81,0:0,0:0,0:0,0:12,15:0:37.00:0	-
9_117553222_G/T	9	117553222	T	ENSG00000181634	ENST00000374044	Transcript	NON_SYNONYMOUS_CODING	1167	35	12	Q/P	cAa/cCa	-	ENSP=ENSP00000363156;PolyPhen=benign(0.067);SIFT=deleterious(0);HGNC=TNFSF15	G	T/T,T/T	T	T	T	A/A,A/A	rs16931748	0.99	.	-5.71	0.000	0.040	814	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.03;BaseQRankSum=-0.374;CAnc=T;DP=87;Dels=0.00;FS=0.000;GAnc=T;GRP=-5.71;HRun=2;HaplotypeScore=0.0000;MQ=38.16;MQ0=0;MQRankSum=-1.257;Map20=1;OAnc=T;QD=37.04;ReadPosRankSum=-0.442;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=814;mSC=0.000;pSC=0.040	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1922,110,0:0,0:0,0:0,1:17,33:0:38.16:0;1/1:36:99:1415,108,0:0,0:0,0:0,0:18,18:0:37.00:0	-
9_123205912_C/G	9	123205912	G	ENSG00000136861	ENST00000345313	Transcript	NON_SYNONYMOUS_CODING	2631	2450	817	T/R	aCa/aGa	-	ENSP=ENSP00000341695;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CDK5RAP2	C	G/G,G/G	G	G	G	A/A,A/A	rs3780679	0.93	.	2.97	0.032	0.920	465	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.17;AMR_AF=0.03;AN=4;ASN_AF=0.05;BaseQRankSum=-0.955;CAnc=G;DP=83;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=2.97;HRun=0;HaplotypeScore=0.9997;MQ=38.21;MQ0=0;MQRankSum=-0.389;Map20=1;OAnc=G;QD=36.92;ReadPosRankSum=-1.096;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=465;mSC=0.032;pSC=0.920	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1842,107,0:0,0:0,1:19,29:0,0:0:38.21:0;1/1:34:99:1299,99,0:0,0:0,0:18,16:0,0:0:37.00:0	-
9_125563212_T/C	9	125563212	C	ENSG00000165204	ENST00000277309	Transcript	NON_SYNONYMOUS_CODING	843	811	271	R/W	Cgg/Tgg	-	ENSP=ENSP00000277309;PolyPhen=benign(0);SIFT=tolerated(0.23);HGNC=OR1K1	T	C/C,C/C	C	-	C	A/A,A/A	rs7046603	0.94	CpG	-1.38	0.000	0.027	618	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.15;AMR_AF=0.03;AN=4;ASN_AF=0.05;BaseQRankSum=-1.028;CAnc=C;CpG;DP=67;Dels=0.00;EUR_AF=0.02;FS=0.000;GRP=-1.38;HRun=0;HaplotypeScore=4.9757;MQ=38.03;MQ0=0;MQRankSum=1.239;Map20=1;OAnc=C;QD=34.07;ReadPosRankSum=0.237;TS=HPOM;TSseq=T,C,C,C;bSC=618;mSC=0.000;pSC=0.027	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:61.43:1669,61,0:0,0:19,26:1,0:1,1:0:38.03:0;1/1:19:57.18:739,57,0:0,0:7,12:0,0:0,0:0:35.93:0	+
9_127113155_C/G	9	127113155	G	ENSG00000119408	ENST00000320246	Transcript	NON_SYNONYMOUS_CODING	1016	871	291	D/H	Gac/Cac	-	ENSP=ENSP00000319734;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NEK6	C	G/G,G/G	G	G	G	A/A,A/A	.	1	CpG	-1.56	0.000	0.912	662	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=82;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.56;HRun=0;HaplotypeScore=0.9995;MQ=38.80;MQ0=0;Map20=1;OAnc=G;QD=37.38;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=662;mSC=0.000;pSC=0.912	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1865,144,0:0,0:0,0:24,25:0,0:0:38.80:0;1/1:33:99:1301,99,0:0,0:0,0:17,16:0,0:0:37.00:0	+
9_130279279_T/C	9	130279279	C	ENSG00000136830	ENST00000373312	Transcript	NON_SYNONYMOUS_CODING	1044	830	277	R/H	cGc/cAc	-	ENSP=ENSP00000362409;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAM129B	T	C/C,T/T	C	C	C	A/A,H/H	rs61742100	0.99	CpG	3.97	0.998	0.366	462	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AN=4;ASN_AF=0.05;CAnc=C;CpG;DP=49;Dels=0.00;FS=0.000;GAnc=C;GRP=3.97;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.87;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=462;mSC=0.998;pSC=0.366	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.29:1160,87,0:0,0:18,11:0,0:0,0:0:37.00:0;0/0:20:60.19:0,60,786:0,0:0,0:0,0:8,12:0:37.00:0	-
9_130474932_C/G	9	130474932	G	ENSG00000160401	ENST00000373293	Transcript	NON_SYNONYMOUS_CODING	764	29	10	R/T	aGg/aCg	-	ENSP=ENSP00000362391;PolyPhen=benign(0);SIFT=tolerated(0.82);HGNC=C9orf117	C	G/G,G/G	G	G	G	A/A,A/A	rs73600054	0.93	CpG	1.69	0.001	0.117	403	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.22;AMR_AF=0.02;AN=4;ASN_AF=0.08;CAnc=G;CpG;DP=74;Dels=0.00;FS=0.000;GAnc=G;GRP=1.69;HRun;HaplotypeScore=0.9997;MQ=39.59;MQ0=0;Map20=1;OAnc=G;QD=35.45;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=403;mSC=0.001;pSC=0.117	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1628,126,0:1,0:0,0:21,22:1,0:0:39.59:0;1/1:29:87.28:1154,87,0:0,0:0,0:14,15:0,0:0:37.00:0	+
9_130523904_T/C	9	130523904	C	ENSG00000095370	ENST00000314830	Transcript	NON_SYNONYMOUS_CODING	655	541	181	G/S	Ggc/Agc	-	ENSP=ENSP00000317817;PolyPhen=benign(0);SIFT=tolerated(0.63);HGNC=SH2D3C	T	C/C,C/C	C	C	C	A/A,A/A	rs35019975	0.92	CpG	4.42	0.563	0.165	482	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.24;AMR_AF=0.04;AN=4;ASN_AF=0.06;BaseQRankSum=0.465;CAnc=C;CpG;DP=57;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=4.42;HRun;HaplotypeScore=0.9997;MQ=37.73;MQ0=0;MQRankSum=-1.056;Map20=1;OAnc=C;QD=36.14;ReadPosRankSum=-0.549;TS=HPGOMC;TSseq=T,C,C,C,-,C;bSC=482;mSC=0.563;pSC=0.165	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:83.38:1515,83,0:0,0:21,19:0,0:1,0:0:37.73:0;1/1:16:48.16:632,48,0:0,0:8,8:0,0:0,0:0:37.00:0	-
9_132637608_A/G	9	132637608	G	ENSG00000136878	ENST00000315480	Transcript	NON_SYNONYMOUS_CODING	2226	2068	690	V/M	Gtg/Atg	-	ENSP=ENSP00000313811;PolyPhen=benign(0);SIFT=tolerated(0.33);HGNC=USP20	A	G/G,A/A	G	G	G	A/A,H/H	rs35781520	0.99	CpG	3.6	0.000	0.690	725	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.02;BaseQRankSum=1.094;CAnc=G;CpG;DP=52;Dels=0.00;EUR_AF=0.01;FS=3.245;GAnc=G;GRP=3.6;HRun=0;HaplotypeScore=1.9995;MQ=37.79;MQ0=0;MQRankSum=-0.365;Map20=1;OAnc=G;QD=35.93;ReadPosRankSum=-1.733;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=725;mSC=0.000;pSC=0.690	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:74.35:1398,74,0:0,1:0,0:20,16:0,0:0:37.79:0;0/0:14:42.14:0,42,560:5,9:0,0:0,0:0,0:0:37.00:0	+
9_132904231_A/G	9	132904231	G	ENSG00000196979	ENST00000358748	Transcript	NON_SYNONYMOUS_CODING	1916	151	51	R/C	Cgc/Tgc	-	ENSP=ENSP00000351598;PolyPhen=unknown(0)	A	A/A,G/G	G	G	G	H/H,A/A	rs140416234	0.99	CpG	-2.87	0.000	0.104	928	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=67;EUR_AF=0.02;GAnc=G;GRP=-2.87;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,T;bSC=928;mSC=0.000;pSC=0.104	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,120,1578:23,17:0,0:0,0:0,0:0:37.00:0;1/1:26:78.24:1016,78,0:0,0:0,0:10,16:0,0:0:37.00:0	-
9_132904267_C/T	9	132904267	T	ENSG00000196979	ENST00000358748	Transcript	NON_SYNONYMOUS_CODING	1880	115	39	I/V	Ata/Gta	-	ENSP=ENSP00000351598;PolyPhen=unknown(0)	C	C/C,T/T	T	T	T	H/H,A/A	rs142735237	0.99	CpG	-2.87	0.000	0.024	928	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=T;CpG;DP=63;EUR_AF=0.02;GAnc=T;GRP=-2.87;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,G,T,T;bSC=928;mSC=0.000;pSC=0.024	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:99:0,117,1532:0,0:21,17:0,0:0,0:0:37.00:0;1/1:24:72.23:953,72,0:0,0:0,0:0,0:7,17:0:37.00:0	-
9_135275592_A/G	9	135275592	G	ENSG00000125482	ENST00000245588	Transcript	NON_SYNONYMOUS_CODING	1465	1421	474	T/I	aCa/aTa	-	ENSP=ENSP00000245588;PolyPhen=benign(0);SIFT=tolerated(0.99);HGNC=TTF1	A	G/G,G/G	G	G	G	A/A,A/A	rs144158263	1.0	.	1.46	0.000	0.503	814	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.02;AN=4;BaseQRankSum=-0.108;CAnc=G;DP=107;Dels=0.00;FS=5.509;GAnc=G;GRP=1.46;HRun=0;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;MQRankSum=-0.595;Map20=1;OAnc=G;QD=37.07;ReadPosRankSum=0.920;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=814;mSC=0.000;pSC=0.503	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2406,153,0:1,0:0,0:17,45:0,0:0:38.84:0;1/1:43:99:1697,129,0:0,0:0,0:25,18:0,0:0:37.00:0	-
9_135930371_G/C	9	135930371	C	ENSG00000148308	ENST00000372095	Transcript	NON_SYNONYMOUS_CODING	1000	833	278	T/S	aCc/aGc	-	ENSP=ENSP00000361167;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=GTF3C5	G	C/C,C/C	C	C	-	A/A,A/A	rs191292694	1.0	.	-1.58	0.000	.	769	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;DP=66;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.58;HRun=4;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;QD=38.91;TS=HPGMC;TSseq=G,C,C,G,G;bSC=769;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1512,114,0:0,0:19,19:0,0:0,0:0:37.00:0;1/1:28:84.25:1091,84,0:0,0:18,10:0,0:0,0:0:37.00:0	+
9_135930637_G/A	9	135930637	A	ENSG00000148308	ENST00000372095	Transcript	NON_SYNONYMOUS_CODING	1266	1099	367	S/G	Agt/Ggt	-	ENSP=ENSP00000361167;PolyPhen=unknown(0);HGNC=GTF3C5	G	A/A,A/A	A	A	-	A/A,A/A	.	1	CpG	-0.367	0.002	.	769	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.523;CAnc=A;CpG;DP=52;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.367;HRun=0;HaplotypeScore=0.9967;MQ=37.57;MQ0=0;MQRankSum=-1.733;Map20=1;QD=34.05;ReadPosRankSum=1.208;TS=HPGMC;TSseq=G,A,A,A,A;bSC=769;mSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:68.72:1225,69,0:16,18:0,0:1,0:0,0:0:37.57:0;1/1:17:48.15:618,48,0:10,7:0,0:0,0:0,0:0:36.40:0	+
9_137968826_T/C	9	137968826	C	ENSG00000130558	ENST00000371799	Transcript	NON_SYNONYMOUS_CODING	550	265	89	R/C	Cgt/Tgt	-	ENSP=ENSP00000360864;PolyPhen=benign(0);HGNC=OLFM1	T	C/C,T/T	C	C	C	A/A,H/H	rs3811138	0.96	CpG	-3.31	0.000	0.003	976	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.14;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=69;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.31;HRun=0;HaplotypeScore=0.0000;MQ=37.62;MQ0=0;Map20=1;OAnc=C;QD=37.48;TS=HPGOMC;TSseq=T,C,C,C,C,T;bSC=976;mSC=0.000;pSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1832,138,0:0,1:23,23:0,0:1,0:0:37.62:0;0/0:21:63.20:0,63,808:0,0:0,0:0,0:11,10:0:37.00:0	+
9_139743890_T/C	9	139743890	C	ENSG00000054148	ENST00000247665	Transcript	NON_SYNONYMOUS_CODING	345	8	3	A/V	gCg/gTg	-	ENSP=ENSP00000247665;PolyPhen=benign(0);SIFT=tolerated(0.84);HGNC=PHPT1	T	C/C,C/C	C	C	C	A/A,A/A	rs75735760	0.98	CpG	.	.	.	884	.	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;BaseQRankSum=-0.963;CAnc=C;CpG;DP=48;Dels=0.00;FS=0.000;GAnc=C;HRun=0;HaplotypeScore=0.9789;MQ=37.00;MQ0=0;MQRankSum=0.321;OAnc=C;QD=33.11;ReadPosRankSum=0.835;TS=HPGOMC;TSseq=T,-,C,C,-,C;bSC=884	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:27:38.24:927,38,0:0,0:14,11:0,0:1,0:0:37.00:0;1/1:21:60.19:791,60,0:0,0:12,9:0,0:0,0:0:37.00:0	+
9_139836554_T/C	9	139836554	C	ENSG00000159069	ENST00000325285	Transcript	NON_SYNONYMOUS_CODING	1120	1040	347	R/K	aGg/aAg	-	ENSP=ENSP00000313034;PolyPhen=benign(0);SIFT=tolerated(0.69);HGNC=FBXW5	T	C/C,C/C	C	C	C	A/A,A/A	rs149967967	1.0	.	-2.92	.	0.645	856	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=61;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.92;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=37.72;TS=HPGOMC;TSseq=T,N,C,C,C,-;bSC=856;pSC=0.645	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1429,111,0:0,0:15,22:0,0:0,0:0:37.81:0;1/1:24:72.23:949,72,0:0,0:12,12:0,0:0,0:0:37.00:0	-
9_139889216_T/G	9	139889216	G	ENSG00000169583	ENST00000494426	Transcript	NON_SYNONYMOUS_CODING	888	628	210	L/M	Ctg/Atg	-	ENSP=ENSP00000419378;PolyPhen=benign(0);SIFT=tolerated(0.13);HGNC=CLIC3	T	G/T,T/T	G	G	G	A/H,H/H	rs3188722	0.98	.	1.35	.	0.404	862	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;BaseQRankSum=1.369;CAnc=G;DP=62;Dels=0.00;FS=1.258;GAnc=G;GRP=1.35;HRun=0;HaplotypeScore=1.9981;MQ=39.20;MQ0=0;MQRankSum=0.950;Map20=1;OAnc=G;QD=11.24;ReadPosRankSum=0.056;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=862;pSC=0.404	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:40:99:480,0,863:0,0:0,0:8,7:14,10:0:39.20:0;0/0:22:66.21:0,66,866:0,0:0,0:0,0:9,13:0:37.00:0	-
9_140139881_T/G	9	140139881	G	ENSG00000188163	ENST00000344774	Transcript	NON_SYNONYMOUS_CODING	455	400	134	P/T	Ccc/Acc	-	ENSP=ENSP00000344729;PolyPhen=benign(0);SIFT=tolerated(0.98);HGNC=FAM166A	T	G/G,G/G	G	G	G	A/A,A/A	.	1	.	2.31	0.055	0.009	789	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=47;Dels=0.00;FS=0.000;GAnc=G;GRP=2.31;HRun=4;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.49;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=789;mSC=0.055;pSC=0.009	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:84.28:1120,84,0:0,1:0,0:14,14:0,0:0:37.00:0;1/1:18:51.15:659,51,0:0,0:0,0:12,5:1,0:0:37.00:0	-
9_140409891_G/C	9	140409891	C	ENSG00000130653	ENST00000277531	Transcript	NON_SYNONYMOUS_CODING	1277	1090	364	E/Q	Gag/Cag	-	ENSP=ENSP00000277531;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PNPLA7	G	C/C,C/C	C	C	C	A/A,A/A	rs3750378	0.94	.	.	.	.	900	.	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.23;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=C;DP=64;Dels=0.00;FS=0.000;GAnc=C;HRun=0;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;OAnc=C;QD=38.87;TS=HPGOMC;TSseq=G,-,C,N,-,C;bSC=900	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1471,111,0:0,0:15,22:0,0:0,0:0:37.81:0;1/1:27:81.26:1063,81,0:0,0:12,15:0,0:0,0:0:37.00:0	-
9_140507366_T/C	9	140507366	C	ENSG00000197070	ENST00000371421	Transcript	NON_SYNONYMOUS_CODING	201	137	46	T/I	aCa/aTa	-	ENSP=ENSP00000360475;PolyPhen=benign(0.002);SIFT=tolerated(0.75);HGNC=ARRDC1	T	C/C,C/C	C	C	C	A/A,A/A	.	1.0	.	-1.18	.	.	735	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-1.820;CAnc=C;DP=68;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.18;HRun=0;HaplotypeScore=0.0000;MQ=37.59;MQ0=0;MQRankSum=-0.461;Map20=1;OAnc=C;QD=35.46;ReadPosRankSum=-0.024;TS=HPGOMC;TSseq=T,C,C,C,-,C;bSC=735	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:73.47:1841,73,0:0,0:21,28:0,0:1,1:0:37.59:0;1/1:17:48.15:625,48,0:0,0:9,8:0,0:0,0:0:37.00:0	+
10_4875591_A/G	10	4875591	G	ENSG00000165568	ENST00000298375	Transcript	NON_SYNONYMOUS_CODING	328	257	86	R/K	aGg/aAg	-	ENSP=ENSP00000298375;PolyPhen=benign(0.001);SIFT=tolerated(0.44);HGNC=AKR1E2	A	G/G,A/A	G	G	G	A/A,H/H	rs17133693	0.95	.	-6.83	0.000	0.030	929	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.05;AMR_AF=0.04;AN=4;ASN_AF=0.11;BaseQRankSum=0.151;CAnc=G;DP=63;Dels=0.00;EUR_AF=0.04;FS=3.118;GAnc=G;GRP=-6.83;HRun;HaplotypeScore=0.0000;MQ=39.09;MQ0=0;MQRankSum=1.059;Map20=1;OAnc=G;QD=33.75;ReadPosRankSum=0.393;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=929;mSC=0.000;pSC=0.030	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:43.38:1451,43,0:2,0:0,0:20,20:0,0:0:39.09:0;0/0:21:63.21:0,63,840:11,10:0,0:0,0:0,0:0:37.00:0	+
10_4884642_T/C	10	4884642	C	ENSG00000165568	ENST00000487985	Transcript	NON_SYNONYMOUS_CODING	129	130	44	R/C	Cgt/Tgt	-	ENSP=ENSP00000431625;PolyPhen=unknown(0);HGNC=AKR1E2	T	C/C,T/T	C	C	C	A/A,H/H	rs12573669	0.95	CpG	-3.34	0.192	0.205	929	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.05;AMR_AF=0.04;AN=4;ASN_AF=0.11;CAnc=C;CpG;DP=90;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-3.34;HRun=0;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;OAnc=C;QD=38.47;TS=HPGOMC;TSseq=T,C,C,C,T,T;bSC=929;mSC=0.192;pSC=0.205	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1726,132,0:0,0:22,22:0,0:0,0:0:37.68:0;0/0:46:99:0,138,1803:0,0:0,0:0,0:29,17:0:37.00:0	+
10_11789382_G/A	10	11789382	A	ENSG00000134463	ENST00000379215	Transcript	NON_SYNONYMOUS_CODING	416	205	69	A/T	Gcg/Acg	-	ENSP=ENSP00000368517;PolyPhen=possibly_damaging(0.668);SIFT=deleterious(0);HGNC=ECHDC3	A	A/A,G/G	G	G	G	H/H,A/A	rs4750090	0.93	CpG	5.53	0.429	0.392	900	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.93;AFR_AF=0.71;AMR_AF=0.98;AN=4;ASN_AF=1.00;CAnc=G;CpG;DP=88;Dels=0.00;EUR_AF=1.00;FS=0.000;GAnc=G;GRP=5.53;HRun=0;HaplotypeScore=3.9231;MQ=38.92;MQ0=0;Map20=1;OAnc=G;QD=37.60;TS=HPGOM;TSseq=G,G,G,G,G;UR;bSC=900;mSC=0.429;pSC=0.392	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2139,166,0:33,22:0,0:0,0:0,0:0:38.92:0;0/0:32:96.29:0,96,1248:0,0:0,0:15,17:0,0:0:37.00:0	+
10_21104613_T/C	10	21104613	C	ENSG00000078114	ENST00000377122	Transcript	NON_SYNONYMOUS_CODING	2579	2182	728	A/T	Gct/Act	-	ENSP=ENSP00000366326;PolyPhen=benign(0);SIFT=tolerated(0.34);HGNC=NEBL	T	C/C,T/T	C	C	C	A/A,H/H	rs71535732	0.96	CpG	4.99	0.004	0.682	595	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AMR_AF=0.07;AN=4;ASN_AF=0.10;CAnc=C;CpG;DP=69;Dels=0.00;FS=0.000;GAnc=C;GRP=4.99;HRun=0;HaplotypeScore=0.9997;MQ=39.83;MQ0=0;Map20=1;OAnc=C;QD=36.27;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=595;mSC=0.004;pSC=0.682	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1520,117,0:0,0:15,26:0,0:0,0:0:39.83:0;0/0:28:84.26:0,84,1079:0,0:0,0:0,0:13,15:0:37.00:0	-
10_37508641_A/G	10	37508641	G	ENSG00000148513	ENST00000361713	Transcript	NON_SYNONYMOUS_CODING	3932	3833	1278	R/Q	cGa/cAa	-	ENSP=ENSP00000354432;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ANKRD30A	A	G/G,G/G	G	G	-	A/A,A/A	.	1	CpG	0.943	0.406	.	900	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=81;Dels=0.00;FS=0.000;GAnc=G;GRP=0.943;HRun=0;HaplotypeScore=0.7340;MQ=37.49;MQ0=0;Map20=1;QD=36.33;TS=HPG;TSseq=A,G,G;bSC=900;mSC=0.406	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1922,153,0:0,0:1,0:29,21:0,0:0:37.49:0;1/1:29:87.21:1064,87,0:0,0:0,0:17,12:0,0:0:35.15:0	+
10_38241067_A/C	10	38241067	C	ENSG00000175395	ENST00000302609	Transcript	NON_SYNONYMOUS_CODING	1572	1359	453	K/N	aaG/aaT	-	ENSP=ENSP00000302222;PolyPhen=benign(0);SIFT=tolerated(0.08);HGNC=ZNF25	A	C/C,C/C	C	C	C	A/A,A/A	rs1208606	0.95	.	-0.696	0.000	0.749	568	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AMR_AF=0.09;AN=4;BaseQRankSum=0.400;CAnc=C;DP=80;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=C;GRP=-0.696;HRun;HaplotypeScore=0.5784;MQ=39.25;MQ0=0;MQRankSum=-1.666;Map20=1;OAnc=C;QD=37.32;ReadPosRankSum=-1.399;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=568;mSC=0.000;pSC=0.749	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1974,112,0:0,1:26,25:0,0:0,0:0:39.25:0;1/1:28:84.27:1085,84,0:0,0:14,14:0,0:0,0:0:37.00:0	-
10_45496126_G/A	10	45496126	A	ENSG00000165511	ENST00000298298	Transcript	NON_SYNONYMOUS_CODING	211	182	61	L/P	cTa/cCa	-	ENSP=ENSP00000298298;PolyPhen=unknown(0);HGNC=C10orf25	G	A/A,A/A	A	A	A	A/A,A/A	rs41301609	0.93	.	-5.15	0.000	0.035	749	0.333333	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.08;AMR_AF=0.02;AN=4;ASN_AF=0.12;CAnc=A;DP=115;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=A;GRP=-5.15;HRun=0;HaplotypeScore=0.0000;MQ=37.43;MQ0=0;Map20=0.333333;OAnc=A;QD=37.67;TS=HPGOM;TSseq=G,A,A,A,A;bSC=749;mSC=0.000;pSC=0.035	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:69:99:2632,199,0:41,28:0,0:0,0:0,0:0:37.43:0;1/1:46:99:1820,138,0:32,14:0,0:0,0:0,0:0:37.00:0	-
10_54074240_A/C	10	54074240	C	ENSG00000107984	ENST00000373970	Transcript	NON_SYNONYMOUS_CODING	185	46	16	L/M	Ctg/Atg	-	ENSP=ENSP00000363081;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DKK1	A	C/C,A/A	C	C	C	A/A,H/H	rs140471040	1.0	.	1.73	.	0.578	843	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=47;Dels=0.00;FS=0.000;GAnc=C;GRP=1.73;HRun=0;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;Map20=1;OAnc=C;QD=38.68;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=843;pSC=0.578	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.31:1271,96,0:0,0:12,20:0,0:0,0:0:38.84:0;0/0:15:42.13:0,42,541:7,8:0,0:0,0:0,0:0:37.00:0	+
10_58118215_A/G	10	58118215	G	ENSG00000122952	ENST00000373940	Transcript	NON_SYNONYMOUS_CODING	244	238	80	R/W	Cgg/Tgg	-	ENSP=ENSP00000363051;PolyPhen=unknown(0);HGNC=ZWINT	A	G/G,G/G	G	G	G	A/A,A/A	rs73283603	0.98	CpG	-7.64	.	0.132	969	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=71;Dels=0.00;FS=0.000;GAnc=G;GRP=-7.64;HRun=0;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;Map20=1;OAnc=G;QD=37.00;TS=HPGOMC;TSseq=A,G,G,G,G,A;bSC=969;pSC=0.132	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1365,105,0:0,1:0,0:19,16:0,0:0:37.83:0;1/1:35:99:1382,105,0:0,0:0,0:19,16:0,0:0:37.00:0	-
10_58118631_G/C	10	58118631	C	ENSG00000122952	ENST00000318387	Transcript	NON_SYNONYMOUS_CODING	207	198	66	E/D	gaG/gaC	-	ENSP=ENSP00000322850;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZWINT	G	G/G,C/C	C	C	C	H/H,A/A	.	1	.	-2.49	.	0.659	969	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=60;GAnc=C;GRP=-2.49;HRun=0;MQ=38.64;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=969;pSC=0.659	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:68.33:0,68,1317:0,1:0,0:18,17:0,0:0:38.64:0;1/1:24:72.24:954,72,0:0,0:12,12:0,0:0,0:0:37.00:0	-
10_69565456_A/C	10	69565456	C	ENSG00000108176	ENST00000225171	Transcript	NON_SYNONYMOUS_CODING	540	387	129	W/C	tgG/tgT	-	ENSP=ENSP00000225171;PolyPhen=benign(0);SIFT=tolerated(0.16);HGNC=DNAJC12	A	A/A,C/C	C	C	C	H/H,A/A	rs36099123	0.98	.	4.81	0.003	0.877	590	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.02;AN=4;CAnc=C;DP=87;GAnc=C;GRP=4.81;HRun;MQ=39.43;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=590;mSC=0.003;pSC=0.877	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,135,1746:14,34:0,0:0,0:0,0:0:39.43:0;1/1:39:99:1544,117,0:0,0:14,25:0,0:0,0:0:37.00:0	-
10_69565471_C/A	10	69565471	A	ENSG00000108176	ENST00000225171	Transcript	NON_SYNONYMOUS_CODING	525	372	124	I/M	atT/atG	-	ENSP=ENSP00000225171;PolyPhen=benign(0);SIFT=tolerated(0.57);HGNC=DNAJC12	C	C/C,A/A	A	A	A	H/H,A/A	rs35690028	0.98	.	1.89	0.156	0.621	590	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.02;AN=4;CAnc=A;DP=89;GAnc=A;GRP=1.89;HRun;MQ=38.64;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=C,A,A,A,A,A;UR;bSC=590;mSC=0.156;pSC=0.621	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:54:99:0,160,2094:0,0:15,39:0,0:0,0:0:38.64:0;1/1:35:99:1359,105,0:15,20:0,0:0,0:0,0:0:37.00:0	-
10_73466872_G/A	10	73466872	A	ENSG00000107736	ENST00000299366	Transcript	NON_SYNONYMOUS_CODING	3568	3181	1061	R/G	Aga/Gga	-	ENSP=ENSP00000299366;PolyPhen=probably_damaging(0.98);SIFT=tolerated(0.87);HGNC=CDH23	G	G/G,A/G	A	A	A	H/H,A/H	.	1	.	-0.216	0.000	0.379	730	1	AC=1;AF=0.25;AN=4;CAnc=A;DP=58;GAnc=A;GRP=-0.216;HRun=0;MQ=38.64;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,G,A;bSC=730;mSC=0.000;pSC=0.379	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:99:0,105,1381:0,0:0,0:22,14:0,0:0:38.64:0;0/1:22:99:318,0,414:5,5:0,0:6,6:0,0:0:37.00:0	+
10_73472565_T/G	10	73472565	G	ENSG00000107736	ENST00000224721	Transcript	NON_SYNONYMOUS_CODING	3760	3373	1125	V/L	Gtg/Ttg	-	ENSP=ENSP00000224721;PolyPhen=benign(0.003);SIFT=tolerated(0.74);HGNC=CDH23	T	G/G,G/G	G	G	G	A/A,A/A	rs77821631	0.99	CpG	4.92	0.000	0.657	730	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=G;CpG;DP=48;Dels=0.00;FS=0.000;GAnc=G;GRP=4.92;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.36;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=730;mSC=0.000;pSC=0.657	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:27:81.26:1069,81,0:0,0:0,0:13,14:0,0:0:37.00:0;1/1:21:63.19:815,63,0:0,0:0,0:9,12:0,0:0:37.00:0	+
10_73887894_T/A	10	73887894	A	ENSG00000138303	ENST00000317126	Transcript	NON_SYNONYMOUS_CODING	1250	903	301	D/E	gaT/gaA	-	ENSP=ENSP00000320461;PolyPhen=benign(0.001);SIFT=tolerated(0.78);HGNC=ASCC1	T	A/A,A/A	A	A	A	A/A,A/A	rs79032469	0.99	.	2.25	0.998	0.843	387	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;BaseQRankSum=-0.706;CAnc=A;DP=91;Dels=0.00;FS=3.522;GAnc=A;GRP=2.25;HRun=0;HaplotypeScore=0.9894;MQ=37.36;MQ0=0;MQRankSum=0.898;Map20=1;OAnc=A;QD=36.07;ReadPosRankSum=-1.155;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=387;mSC=0.998;pSC=0.843	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2017,123,0:23,31:0,0:0,0:1,0:0:37.36:0;1/1:36:99:1401,108,0:16,20:0,0:0,0:0,0:0:37.00:0	-
10_75000739_G/A	10	75000739	A	ENSG00000138286	ENST00000242505	Transcript	NON_SYNONYMOUS_CODING	1885	1711	571	R/G	Aga/Gga	-	ENSP=ENSP00000242505;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAM149B1	G	A/A,A/A	A	A	A	A/A,A/A	.	1	CpG	4.6	1.000	0.781	37	1	AC=4;AF=1.00;AN=4;CAnc=A;CpG;DP=74;Dels=0.00;FS=0.000;GAnc=A;GRP=4.6;HRun=0;HaplotypeScore=0.0000;MQ=38.58;MQ0=0;Map20=1;OAnc=A;QD=38.33;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=37;mSC=1.000;pSC=0.781	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2179,166,0:30,26:0,0:0,0:0,0:0:38.58:0;1/1:18:54.18:708,54,0:6,12:0,0:0,0:0,0:0:37.00:0	+
10_98078174_C/T	10	98078174	T	ENSG00000107447	ENST00000371174	Transcript	NON_SYNONYMOUS_CODING	371	269	90	V/A	gTa/gCa	-	ENSP=ENSP00000360216;PolyPhen=benign(0.001);SIFT=tolerated(0.29);HGNC=DNTT	C	C/C,T/T	T	T	T	H/H,A/A	rs36126211	0.99	.	1.73	0.986	.	634	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;CAnc=T;DP=74;GAnc=T;GRP=1.73;HRun=0;MQ=38.32;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=634;mSC=0.986	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,135,1728:0,0:25,18:0,0:0,0:0:38.32:0;1/1:29:87.27:1145,87,0:0,0:0,0:0,0:16,13:0:37.00:0	+
10_99350103_T/C	10	99350103	C	ENSG00000203942	ENST00000370640	Transcript	NON_SYNONYMOUS_CODING	654	449	150	T/I	aCa/aTa	-	ENSP=ENSP00000359674;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C10orf62	T	C/C,C/C	C	C	C	A/A,A/A	rs76383275	0.99	.	2.09	0.000	.	680	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=C;DP=66;Dels=0.00;FS=0.000;GAnc=C;GRP=2.09;HRun=0;HaplotypeScore=0.0000;MQ=38.15;MQ0=0;Map20=1;OAnc=C;QD=37.76;TS=HPGOMC;TSseq=T,C,C,-,C,C;bSC=680;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1657,126,0:0,0:20,23:0,0:0,0:0:38.15:0;1/1:23:66.21:860,66,0:0,0:6,17:0,0:0,0:0:37.00:0	+
10_102676434_G/A	10	102676434	A	ENSG00000119906	ENST00000238961	Transcript	NON_SYNONYMOUS_CODING	440	292	98	K/E	Aaa/Gaa	-	ENSP=ENSP00000238961;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=FAM178A	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	4.72	0.981	.	219	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=96;Dels=0.00;FS=0.000;GAnc=A;GRP=4.72;HRun=4;HaplotypeScore=0.0000;MQ=39.47;MQ0=0;Map20=1;OAnc=A;QD=37.86;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=219;mSC=0.981	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2267,172,0:35,24:0,0:0,0:0,0:0:39.47:0;1/1:37:99:1448,111,0:16,21:0,0:0,0:0,0:0:37.00:0	+
10_102799264_C/G	10	102799264	G	ENSG00000107819	ENST00000224807	Transcript	NON_SYNONYMOUS_CODING	1356	900	300	K/N	aaG/aaC	-	ENSP=ENSP00000224807;PolyPhen=benign(0);SIFT=tolerated(0.64);HGNC=SFXN3	C	G/G,C/C	G	G	G	A/A,H/H	rs57571683	0.99	.	2.37	0.154	.	594	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AN=4;BaseQRankSum=-0.141;CAnc=G;DP=66;Dels=0.00;FS=3.075;GAnc=G;GRP=2.37;HRun=0;HaplotypeScore=0.0000;MQ=39.00;MQ0=0;MQRankSum=-0.930;Map20=1;OAnc=G;QD=35.12;ReadPosRankSum=-1.775;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=594;mSC=0.154	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:60.86:1578,61,0:0,0:2,0:22,20:0,0:0:39.00:0;0/0:22:66.21:0,66,862:0,0:10,12:0,0:0,0:0:37.00:0	+
10_102822560_A/T	10	102822560	T	ENSG00000107821	ENST00000313664	Transcript	NON_SYNONYMOUS_CODING	1136	211	71	W/R	Tgg/Agg	-	ENSP=ENSP00000313288;PolyPhen=benign(0.047);SIFT=tolerated(0.16);HGNC=KAZALD1	A	T/T,A/A	T	T	T	A/A,H/H	rs61731071	0.99	.	0.93	0.350	.	536	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AN=4;CAnc=T;DP=37;Dels=0.00;FS=0.000;GAnc=T;GRP=0.93;HRun=0;HaplotypeScore=0.0000;MQ=38.19;MQ0=0;Map20=1;OAnc=T;QD=38.23;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=536;mSC=0.350	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:25:75.24:989,75,0:0,0:0,0:0,0:9,16:0:38.19:0;0/0:12:36.12:0,36,480:9,3:0,0:0,0:0,0:0:37.00:0	+
10_105437845_G/C	10	105437845	C	ENSG00000107957	ENST00000540321	Transcript	NON_SYNONYMOUS_CODING	78	67	23	V/L	Gtt/Ctt	-	ENSP=ENSP00000443663;PolyPhen=benign(0);SIFT=deleterious(0);HGNC=SH3PXD2A	G	C/C,G/G	C	C	C	A/A,H/H	.	1	.	-0.08	0.050	.	473	1	AC=2;AF=0.50;AN=4;BaseQRankSum=-1.354;CAnc=C;DP=86;Dels=0.00;FS=4.393;GAnc=C;GRP=-0.08;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=1.039;Map20=1;OAnc=C;QD=37.06;ReadPosRankSum=1.480;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=473;mSC=0.050	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2071,126,0:0,0:35,19:0,1:0,0:0:37.00:0;0/0:31:93.30:0,93,1233:0,0:0,0:12,19:0,0:0:37.00:0	-
10_112660260_A/G	10	112660260	G	ENSG00000214413	ENST00000423273	Transcript	NON_SYNONYMOUS_CODING	155	62	21	T/M	aCg/aTg	-	ENSP=ENSP00000432274;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=BBIP1	A	G/G,G/G	G	G	G	A/A,A/A	.	1	CpG	5.3	1.000	.	585	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=79;Dels=0.00;FS=0.000;GAnc=G;GRP=5.3;HRun=0;HaplotypeScore=0.0000;MQ=40.28;MQ0=0;Map20=1;OAnc=G;QD=38.72;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=585;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1737,132,0:0,0:0,0:23,21:0,0:0:40.28:0;1/1:35:99:1371,105,0:0,0:0,0:19,16:0,0:0:37.00:0	-
10_112660279_G/A	10	112660279	A	ENSG00000214413	ENST00000454061	Transcript	NON_SYNONYMOUS_CODING	412	275	92	I/T	aTt/aCt	-	ENSP=ENSP00000433157;PolyPhen=benign(0);HGNC=BBIP1	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	4.15	0.996	.	585	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=77;Dels=0.00;FS=0.000;GAnc=A;GRP=4.15;HRun;HaplotypeScore=0.8321;MQ=39.90;MQ0=0;Map20=1;OAnc=A;QD=37.26;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=585;mSC=0.996	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1896,144,0:30,20:0,0:0,0:0,0:0:39.90:0;1/1:27:81.27:1076,81,0:12,15:0,0:0,0:0,0:0:37.00:0	-
10_118321055_T/A	10	118321055	A	ENSG00000175535	ENST00000369221	Transcript	NON_SYNONYMOUS_CODING	1269	1241	414	K/M	aAg/aTg	-	ENSP=ENSP00000358223;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PNLIP	T	A/A,A/A	A	A	A	A/A,A/A	rs111319548	1.0	.	-5.63	0.045	.	714	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=A;DP=89;Dels=0.00;FS=0.000;GAnc=A;GRP=-5.63;HRun;HaplotypeScore=0.0000;MQ=39.56;MQ0=0;Map20=1;OAnc=A;QD=35.91;TS=HPGOMC;TSseq=T,A,A,A,A,A;UR;bSC=714;mSC=0.045	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2080,160,0:27,28:0,0:1,0:0,0:0:39.56:0;1/1:32:96.31:1272,96,0:13,19:0,0:0,0:0,0:0:37.00:0	+
10_118969346_T/C	10	118969346	C	ENSG00000186795	ENST00000334549	Transcript	NON_SYNONYMOUS_CODING	691	691	231	P/S	Cct/Tct	-	ENSP=ENSP00000334650;PolyPhen=benign(0.002);SIFT=tolerated(0.1);HGNC=KCNK18	T	T/T,C/C	C	C	C	H/H,A/A	rs363315	0.92	.	0.00107	0.006	.	872	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.08;AFR_AF=0.08;AMR_AF=0.12;AN=4;ASN_AF=0.10;CAnc=C;DP=80;EUR_AF=0.03;GAnc=C;GRP=0.00107;HRun;MQ=37.69;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,T,C;bSC=872;mSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,129,1677:0,0:0,0:0,0:23,19:0:37.69:0;1/1:37:99:1450,111,0:0,0:13,24:0,0:0,0:0:37.00:0	+
10_119044454_G/A	10	119044454	A	ENSG00000165650	ENST00000334464	Transcript	NON_SYNONYMOUS_CODING	2030	1790	597	V/A	gTg/gCg	-	ENSP=ENSP00000334642;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PDZD8	G	G/G,A/G	A	A	A	H/H,A/H	.	1	CpG	2.12	0.778	.	448	1	AC=1;AF=0.25;AN=4;CAnc=A;CpG;DP=89;GAnc=A;GRP=2.12;HRun=0;MQ=38.04;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=448;mSC=0.778	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:99:0,126,2055:0,3:0,0:34,20:0,0:0:38.04:0;0/1:32:99:443,0,607:9,5:0,0:9,9:0,0:0:37.00:0	-
10_134145320_A/G	10	134145320	G	ENSG00000165752	ENST00000368619	Transcript	NON_SYNONYMOUS_CODING	16	17	6	A/V	gCg/gTg	-	ENSP=ENSP00000357608;PolyPhen=unknown(0);HGNC=STK32C	A	G/G,A/A	G	G	G	A/A,H/H	rs147823719	0.97	CpG	0.784	0.048	.	982	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.08;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=41;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=0.784;HRun=0;HaplotypeScore=0.5784;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.04;TS=HPGOM;TSseq=A,G,G,G,G;bSC=982;mSC=0.048	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:87.27:1144,87,0:0,0:1,0:16,13:0,0:0:37.00:0;0/0:11:30.10:0,30,397:7,4:0,0:0,0:0,0:0:37.00:0	-
10_134752151_T/C	10	134752151	C	ENSG00000171811	ENST00000368582	Transcript	NON_SYNONYMOUS_CODING	579	478	160	V/I	Gta/Ata	-	ENSP=ENSP00000357571;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=TTC40	T	T/T,C/C	C	C	C	H/H,A/A	.	1	CpG	.	.	.	970	.	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=89;GAnc=C;HRun=0;MQ=37.48;MQ0=0;OAnc=C;TS=HPGOMC;TSseq=T,-,C,C,C,C;bSC=970	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:62:99:0,184,2402:0,0:0,0:0,0:27,35:0:37.48:0;1/1:27:81.27:1077,81,0:0,0:11,16:0,0:0,0:0:37.00:0	-
11_490035_C/T	11	490035	T	ENSG00000174915	ENST00000308020	Transcript	NON_SYNONYMOUS_CODING	1444	1268	423	V/A	gTg/gCg	-	ENSP=ENSP00000308258;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PTDSS2	C	T/T,C/C	T	T	T	A/A,H/H	rs61742833	0.94	CpG	2.6	1.000	0.492	884	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.01;AMR_AF=0.19;AN=4;CAnc=T;CpG;DP=67;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=T;GRP=2.6;HRun=0;HaplotypeScore=0.0000;MQ=37.20;MQ0=0;Map20=1;OAnc=T;QD=34.84;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=884;mSC=1.000;pSC=0.492	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1810,141,0:0,0:0,0:0,0:25,25:0:37.20:0;0/0:16:48.15:0,48,628:0,0:14,2:0,0:0,0:0:37.00:0	+
11_609577_C/T	11	609577	T	ENSG00000070047	ENST00000264555	Transcript	NON_SYNONYMOUS_CODING	4249	4121	1374	V/A	gTg/gCg	-	ENSP=ENSP00000264555;PolyPhen=benign(0);SIFT=tolerated(0.61);HGNC=PHRF1	C	T/T,T/C	T	T	T	A/A,A/H	rs7123948	0.92	CpG	-6.43	0.000	0.004	923	1	1000gALT=T;AC=3;AF=0.75;AF1000g=0.08;AFR_AF=0.24;AMR_AF=0.06;AN=4;BaseQRankSum=1.147;CAnc=T;CpG;DP=69;Dels=0.00;EUR_AF=0.04;FS=2.359;GAnc=T;GRP=-6.43;HRun=0;HaplotypeScore=4.9743;MQ=40.46;MQ0=0;MQRankSum=-1.564;Map20=1;OAnc=T;QD=33.57;ReadPosRankSum=-1.397;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=923;mSC=0.000;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:70.61:1711,71,0:0,0:1,1:0,0:21,26:0:40.46:0;0/1:19:99:252,0,383:0,0:3,8:0,0:4,4:0:37.00:0	+
11_830044_G/A	11	830044	A	ENSG00000177685	ENST00000321883	Transcript	NON_SYNONYMOUS_CODING	959	517	173	S/G	Agc/Ggc	-	ENSP=ENSP00000324024;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=EFCAB4A	G	A/A,A/A	A	A	A	A/A,A/A	rs35567200	0.96	.	0.583	0.731	0.039	862	0.5	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.07;AMR_AF=0.02;AN=4;CAnc=A;DP=54;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=A;GRP=0.583;HRun=0;HaplotypeScore=0.0000;MQ=37.75;MQ0=0;Map20=0.5;OAnc=A;QD=38.62;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=862;mSC=0.731;pSC=0.039	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1578,120,0:20,20:0,0:0,0:0,0:0:37.75:0;1/1:14:42.13:535,42,0:7,7:0,0:0,0:0,0:0:37.00:0	+
11_1272683_T/C	11	1272683	C	ENSG00000117983	ENST00000349637	Transcript	NON_SYNONYMOUS_CODING	14463	14405	4802	T/M	aCg/aTg	-	ENSP=ENSP00000343037;PolyPhen=unknown(0);HGNC=MUC5B	T	C/T,C/T	C	C	C	A/H,A/H	.	1	CpG,RM	1.34	0.000	0.002	940	1	AC=2;AF=0.50;AN=4;BaseQRankSum=-0.966;CAnc=C;CpG;DP=65;Dels=0.00;FS=0.000;GAnc=C;GRP=1.34;HRun=0;HaplotypeScore=4.8609;MQ=36.73;MQ0=0;MQRankSum=0.446;Map20=1;OAnc=C;QD=7.95;RM;ReadPosRankSum=0.124;TS=HPGO;TSseq=T,C,C,-;bSC=940;mSC=0.000;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:46:99:396,0,1019:0,0:6,9:0,0:16,15:0:36.73:0;0/1:19:99:112,0,487:0,0:0,5:0,0:8,6:0:34.82:0	+
11_1275988_T/C	11	1275988	C	ENSG00000117983	ENST00000349637	Transcript	NON_SYNONYMOUS_CODING	15432	15374	5125	P/L	cCg/cTg	-	ENSP=ENSP00000343037;PolyPhen=unknown(0);HGNC=MUC5B	T	C/C,C/C	C	C	C	A/A,A/A	rs56232219	0.98	CpG	-0.0185	0.000	0.110	934	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=71;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-0.0185;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.18;TS=HPGO;TSseq=T,C,C,-;bSC=934;mSC=0.000;pSC=0.110	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1743,132,0:0,0:18,26:0,0:2,0:0:37.00:0;1/1:25:75.24:968,75,0:0,0:13,12:0,0:0,0:0:36.60:0	+
11_1278912_G/C	11	1278912	C	ENSG00000117983	ENST00000349637	Transcript	NON_SYNONYMOUS_CODING	16312	16254	5418	D/E	gaC/gaG	-	ENSP=ENSP00000343037;PolyPhen=unknown(0);HGNC=MUC5B	G	C/C,C/C	C	C	C	A/A,A/A	rs56220864	0.98	.	2.97	0.917	0.170	940	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.01;AN=4;BaseQRankSum=1.325;CAnc=C;DP=55;Dels=0.00;EUR_AF=0.04;FS=3.554;GAnc=C;GRP=2.97;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=1.631;Map20=1;OAnc=C;QD=35.50;ReadPosRankSum=-1.019;TS=HPGO;TSseq=G,C,C,N;bSC=940;mSC=0.917;pSC=0.170	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:62.30:1240,62,0:0,0:13,19:1,0:0,0:0:37.00:0;1/1:21:63.21:840,63,0:0,0:11,10:0,0:0,0:0:37.00:0	+
11_2415292_T/C	11	2415292	C	ENSG00000110651	ENST00000481687	Transcript	NON_SYNONYMOUS_CODING	215	167	56	A/V	gCa/gTa	-	ENSP=ENSP00000432033;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=CD81	T	C/C,T/T	C	C	C	A/A,H/H	rs1989896	0.98	.	-0.436	0.000	0.185	988	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=C;DP=60;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.436;HRun=0;HaplotypeScore=4.9687;MQ=38.35;MQ0=0;Map20=1;OAnc=C;QD=37.54;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=988;mSC=0.000;pSC=0.185	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1685,126,0:0,1:17,26:0,0:0,0:0:38.35:0;0/0:16:48.16:0,48,640:0,0:0,0:0,0:9,7:0:37.00:0	+
11_5152957_T/C	11	5152957	C	ENSG00000171944	ENST00000307388	Transcript	NON_SYNONYMOUS_CODING	916	916	306	V/I	Gtt/Att	-	ENSP=ENSP00000303469;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR52A5	T	C/C,C/C	C	C	C	A/A,A/A	rs74051326	0.97	.	4.85	0.005	0.733	829	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.13;AMR_AF=0.01;AN=4;CAnc=C;DP=110;Dels=0.00;FS=0.000;GAnc=C;GRP=4.85;HRun=0;HaplotypeScore=0.9997;MQ=36.94;MQ0=0;Map20=1;OAnc=C;QD=39.07;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=829;mSC=0.005;pSC=0.733	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2690,205,0:0,0:37,30:0,0:0,0:0:36.94:0;1/1:42:86.41:1592,86,0:0,0:26,15:0,0:1,0:0:37.00:0	-
11_5530026_A/G	11	5530026	G	ENSG00000175520	ENST00000311659	Transcript	NON_SYNONYMOUS_CODING	911	763	255	R/C	Cgc/Tgc	-	ENSP=ENSP00000347997;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=UBQLN3	A	G/G,G/G	G	G	G	A/A,A/A	rs2234446	1.0	CpG	4.71	0.824	0.002	680	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;CpG;DP=78;Dels=0.00;FS=0.000;GAnc=G;GRP=4.71;HRun=0;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;Map20=1;OAnc=G;QD=39.21;TS=HPGOM;TSseq=A,G,G,G,G;bSC=680;mSC=0.824;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1915,144,0:0,0:0,0:26,22:0,0:0:38.84:0;1/1:30:90.28:1166,90,0:0,0:0,0:11,19:0,0:0:37.00:0	-
11_6220605_C/T	11	6220605	T	ENSG00000175485	ENST00000311352	Transcript	NON_SYNONYMOUS_CODING	230	152	51	L/P	cTg/cCg	-	ENSP=ENSP00000309673;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR52W1	C	T/T,C/C	T	T	-	A/A,H/H	rs138929210	1.0	CpG	3.6	.	0.359	571	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.02;AN=4;BaseQRankSum=0.346;CAnc=T;CpG;DP=64;Dels=0.00;FS=0.000;GAnc=T;GRP=3.6;HRun=0;HaplotypeScore=2.9745;MQ=38.32;MQ0=0;MQRankSum=0.731;Map20=1;QD=36.64;ReadPosRankSum=0.577;TS=HPGC;TSseq=C,T,T,T;UR;bSC=571;pSC=0.359	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:95.41:1682,95,0:0,0:1,0:0,0:22,21:0:38.32:0;0/0:19:57.17:0,57,723:0,0:8,11:0,0:0,0:0:37.00:0	+
11_6654769_C/T	11	6654769	T	ENSG00000166341	ENST00000299441	Transcript	NON_SYNONYMOUS_CODING	2741	2329	777	N/D	Aac/Gac	-	ENSP=ENSP00000299441;PolyPhen=benign(0);SIFT=tolerated(0.61);HGNC=DCHS1	C	T/T,T/T	T	T	T	A/A,A/A	.	1	.	4.84	1.000	0.886	234	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.473;CAnc=T;DP=65;Dels=0.00;FS=0.000;GAnc=T;GRP=4.84;HRun;HaplotypeScore=1.9997;MQ=38.38;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=T;QD=34.18;ReadPosRankSum=1.559;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=234;mSC=1.000;pSC=0.886	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:76.26:1503,76,0:0,0:0,1:0,0:18,24:0:38.38:0;1/1:22:66.21:868,66,0:0,0:0,0:0,0:12,10:0:37.00:0	-
11_7507182_A/G	11	7507182	G	ENSG00000183801	ENST00000329293	Transcript	NON_SYNONYMOUS_CODING	470	76	26	A/T	Gcc/Acc	-	ENSP=ENSP00000332511;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OLFML1	A	G/G,G/G	G	G	G	A/A,A/A	rs118163706	0.98	.	5.59	0.934	0.503	765	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.02;AN=4;CAnc=G;DP=44;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=G;GRP=5.59;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.52;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=765;mSC=0.934;pSC=0.503	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.30:1227,93,0:0,0:0,0:14,16:0,0:0:37.00:0;1/1:13:39.13:516,39,0:0,0:0,0:5,8:0,0:0:37.00:0	+
11_12281427_T/C	11	12281427	C	ENSG00000133816	ENST00000256194	Transcript	NON_SYNONYMOUS_CODING	3605	3317	1106	P/L	cCg/cTg	-	ENSP=ENSP00000256194;PolyPhen=benign(0);SIFT=tolerated(0.6);HGNC=MICAL2	T	T/T,C/C	C	C	C	H/H,A/A	rs1027335	0.98	CpG	1.27	0.008	0.418	856	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=58;GAnc=C;GRP=1.27;HRun=3;MQ=38.32;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,T,C;UR;bSC=856;mSC=0.008;pSC=0.418	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,132,1709:0,0:0,0:0,0:20,24:0:38.32:0;1/1:13:39.13:520,39,0:0,0:6,7:0,0:0,0:0:37.00:0	+
11_15197630_G/C	11	15197630	C	ENSG00000188487	ENST00000379554	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	587	541	181	Q/E	Cag/Gag	-	ENSP=ENSP00000368872;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=INSC	G	C/C,G/G	C	C	C	A/A,H/H	.	1	CpG	4.16	1.000	0.544	853	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=4.16;HRun;HaplotypeScore=0.9967;MQ=38.52;MQ0=0;Map20=1;OAnc=C;QD=38.07;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=853;mSC=1.000;pSC=0.544	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1518,117,0:0,0:21,17:0,0:0,0:0:38.52:0;0/0:24:72.23:0,72,938:0,0:0,0:13,11:0,0:0:37.00:0	+
11_28119295_T/C	11	28119295	C	ENSG00000121621	ENST00000263181	Transcript	NON_SYNONYMOUS_CODING	329	200	67	R/K	aGa/aAa	-	ENSP=ENSP00000263181;PolyPhen=benign(0.007);SIFT=tolerated(1);HGNC=KIF18A	T	C/C,C/C	C	C	C	A/A,A/A	.	1	.	2.62	0.991	0.966	562	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.223;CAnc=C;DP=107;Dels=0.00;FS=4.708;GAnc=C;GRP=2.62;HRun=0;HaplotypeScore=0.9997;MQ=39.98;MQ0=0;MQRankSum=0.102;Map20=1;OAnc=C;QD=37.09;ReadPosRankSum=-1.630;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=562;mSC=0.991;pSC=0.966	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2555,165,0:0,0:22,44:0,0:1,0:0:39.98:0;1/1:39:99:1516,117,0:0,0:18,21:0,0:0,0:0:37.00:0	-
11_43339999_G/A	11	43339999	A	ENSG00000166181	ENST00000455725	Transcript	NON_SYNONYMOUS_CODING	248	3	1	I/M	atA/atG	-	ENSP=ENSP00000399341;PolyPhen=unknown(0);HGNC=API5	G	A/A,G/G	A	A	A	A/A,H/H	.	1	.	-0.977	0.000	0.019	364	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=75;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.977;HRun=3;HaplotypeScore=0.0000;MQ=38.77;MQ0=0;Map20=1;OAnc=A;QD=39.10;TS=HPGOMC;TSseq=G,A,A,A,T,A;UR;bSC=364;mSC=0.000;pSC=0.019	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1988,150,0:30,20:0,0:0,0:0,0:0:38.77:0;0/0:25:75.24:0,75,989:0,0:0,0:8,17:0,0:0:37.00:0	+
11_43964569_C/T	11	43964569	T	ENSG00000187479	ENST00000339446	Transcript	NON_SYNONYMOUS_CODING	1054	1054	352	S/P	Tcc/Ccc	-	ENSP=ENSP00000340667;PolyPhen=benign(0.004);SIFT=tolerated(1);HGNC=C11orf96	C	T/T,T/T	T	T	T	A/A,A/A	rs2434483	0.91	.	-5.44	.	0.338	923	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.14;AMR_AF=0.05;AN=4;ASN_AF=0.10;CAnc=T;DP=31;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=T;GRP=-5.44;HRun=0;HaplotypeScore=0.0000;MQ=38.41;MQ0=0;Map20=1;OAnc=T;QD=36.82;TS=HPGOMC;TSseq=C,N,T,T,T,T;UR;bSC=923;pSC=0.338	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:21:63.19:806,63,0:0,0:0,0:0,0:6,15:0:38.41:0;1/1:10:30.09:374,30,0:0,0:0,0:0,0:5,5:0:37.00:0	+
11_45931647_T/G	11	45931647	G	ENSG00000121680	ENST00000241041	Transcript	NON_SYNONYMOUS_CODING	1052	1034	345	P/H	cCc/cAc	-	ENSP=ENSP00000241041;PolyPhen=benign(0);SIFT=tolerated(0.29);HGNC=PEX16	T	G/G,G/G	G	G	G	A/A,A/A	rs79435202	0.99	.	2.9	0.000	0.011	330	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=G;DP=53;Dels=0.00;FS=0.000;GAnc=G;GRP=2.9;HRun=3;HaplotypeScore=0.5784;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.02;TS=HPGOMC;TSseq=T,G,G,N,G,G;bSC=330;mSC=0.000;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1551,117,0:0,0:0,0:18,23:0,0:0:37.00:0;1/1:12:36.12:480,36,0:0,0:0,0:6,6:0,0:0:37.00:0	-
11_46765950_A/G	11	46765950	G	ENSG00000175216	ENST00000525896	Transcript	NON_SYNONYMOUS_CODING	597	599	200	A/V	gCt/gTt	-	ENSP=ENSP00000434523;PolyPhen=unknown(0);HGNC=CKAP5	A	G/G,G/G	G	G	G	A/A,A/A	rs113487641	1.0	.	-0.203	0.000	0.843	14	0.5	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=G;DP=61;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.203;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=0.5;OAnc=G;QD=37.66;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=14;mSC=0.000;pSC=0.843	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1426,111,0:0,0:0,0:15,20:0,0:0:37.00:0;1/1:24:69.22:904,69,0:0,0:0,0:16,8:0,0:0:37.00:0	-
11_47609867_G/A	11	47609867	A	ENSG00000196666	ENST00000356737	Transcript	NON_SYNONYMOUS_CODING	556	556	186	A/T	Gcc/Acc	-	ENSP=ENSP00000349175;PolyPhen=probably_damaging(0.926);SIFT=tolerated(0.06);HGNC=FAM180B	A	G/G,G/G	G	G	G	A/A,A/A	rs4486587	0.99	.	1.36	0.996	0.868	10	1	1000gALT=A;AC=0;AF=0.00;AF1000g=0.99;AFR_AF=0.95;AMR_AF=0.99;AN=4;ASN_AF=1.00;CAnc=G;DP=44;EUR_AF=0.99;GAnc=G;GRP=1.36;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=G,G,G,G,-,G;bSC=10;mSC=0.996;pSC=0.868	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:32:96.32:0,96,1280:0,0:0,0:21,11:0,0:0:37.00:0;0/0:12:36.10:0,36,465:0,0:0,0:7,5:0,0:0:37.00:0	+
11_55111172_A/T	11	55111172	T	ENSG00000181961	ENST00000314721	Transcript	NON_SYNONYMOUS_CODING	546	496	166	F/I	Ttc/Atc	-	ENSP=ENSP00000325128;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR4A16	A	T/A,T/A	T	T	-	A/H,A/H	.	1	.	2.69	.	.	.	1	AC=2;AF=0.50;AN=4;BaseQRankSum=1.384;CAnc=T;DP=131;Dels=0.00;FS=2.167;GAnc=T;GRP=2.69;HRun;HaplotypeScore=18.9761;MQ=35.51;MQ0=7;MQRankSum=-2.165;Map20=1;QD=8.34;ReadPosRankSum=0.698;TS=HPGC;TSseq=A,T,T,T	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:77:99:672,0,1612:16,30:0,0:0,0:10,17:0:35.51:4;0/1:54:99:381,0,1197:14,21:0,0:0,0:8,11:0:34.01:3	+
11_55371828_G/T	11	55371828	T	ENSG00000172188	ENST00000302231	Transcript	NON_SYNONYMOUS_CODING	47	22	8	T/P	Act/Cct	-	ENSP=ENSP00000306651;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR4C11	G	T/T,T/T	T	T	-	A/A,A/A	rs491160	0.94	.	4.43	.	.	145	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.11;AMR_AF=0.04;AN=4;BaseQRankSum=0.513;CAnc=T;DP=78;Dels=0.00;EUR_AF=0.07;FS=4.536;GAnc=T;GRP=4.43;HRun=0;HaplotypeScore=0.0000;MQ=40.05;MQ0=0;MQRankSum=-0.064;Map20=1;QD=35.38;ReadPosRankSum=-0.898;TS=HPG;TSseq=G,T,T;bSC=145	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2050,123,0:0,0:0,0:1,0:21,35:0:40.05:0;1/1:21:63.20:820,63,0:0,0:0,0:0,0:12,9:0:37.00:0	-
11_55681416_A/G	11	55681416	G	ENSG00000187612	ENST00000344514	Transcript	NON_SYNONYMOUS_CODING	643	643	215	L/F	Ctc/Ttc	-	ENSP=ENSP00000342448;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=OR5W2	A	G/G,G/G	G	G	-	A/A,A/A	rs17596422	0.96	.	4.08	.	.	144	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.02;AN=4;BaseQRankSum=-0.638;CAnc=G;DP=90;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=G;GRP=4.08;HRun=0;HaplotypeScore=3.9657;MQ=37.53;MQ0=0;MQRankSum=-0.638;Map20=1;QD=37.41;ReadPosRankSum=-0.395;TS=HPG;TSseq=A,G,G;bSC=144	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2165,132,0:1,0:0,0:40,16:0,0:0:37.53:0;1/1:33:99:1303,99,0:0,0:0,0:20,13:0,0:0:37.00:0	-
11_55703650_A/G	11	55703650	G	ENSG00000167825	ENST00000301532	Transcript	NON_SYNONYMOUS_CODING	227	227	76	S/F	tCc/tTc	-	ENSP=ENSP00000301532;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR5I1	A	G/G,G/G	G	G	-	A/A,A/A	rs9666086	0.96	.	5.05	.	.	145	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;BaseQRankSum=0.922;CAnc=G;DP=83;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=G;GRP=5.05;HRun;HaplotypeScore=0.9997;MQ=39.48;MQ0=0;MQRankSum=1.659;Map20=1;QD=36.83;ReadPosRankSum=-1.732;TS=HPG;TSseq=A,G,G;bSC=145	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1764,101,0:0,1:0,0:19,26:0,0:0:39.48:0;1/1:36:99:1424,108,0:0,0:0,0:20,16:0,0:0:37.00:0	-
11_55703861_T/C	11	55703861	C	ENSG00000167825	ENST00000301532	Transcript	NON_SYNONYMOUS_CODING	16	16	6	G/R	Gga/Aga	-	ENSP=ENSP00000301532;PolyPhen=benign(0);SIFT=tolerated(0.57);HGNC=OR5I1	T	C/C,C/C	C	C	-	A/A,A/A	rs17597625	0.96	.	4.06	.	.	145	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;CAnc=C;DP=101;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=C;GRP=4.06;HRun;HaplotypeScore=0.0000;MQ=39.82;MQ0=0;Map20=1;QD=38.26;TS=HPG;TSseq=T,C,C;bSC=145	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:72:99:2788,214,0:0,0:36,34:0,0:0,0:0:39.82:0;1/1:29:87.29:1160,87,0:0,0:14,15:0,0:0,0:0:37.00:0	-
11_55735518_G/A	11	55735518	A	ENSG00000174970	ENST00000312345	Transcript	NON_SYNONYMOUS_CODING	473	422	141	I/T	aTc/aCc	-	ENSP=ENSP00000311477;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=OR10AG1	G	A/A,A/A	A	A	-	A/A,A/A	rs61896165	0.96	.	5.47	.	.	149	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;CAnc=A;DP=95;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=A;GRP=5.47;HRun=0;HaplotypeScore=0.0000;MQ=38.12;MQ0=0;Map20=1;QD=38.63;TS=HPG;TSseq=G,A,A;bSC=149	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2080,160,0:23,30:0,0:0,0:0,0:0:38.12:0;1/1:42:99:1645,126,0:18,24:0,0:0,0:0,0:0:37.00:0	-
11_55735857_A/G	11	55735857	G	ENSG00000174970	ENST00000312345	Transcript	NON_SYNONYMOUS_CODING	134	83	28	T/M	aCg/aTg	-	ENSP=ENSP00000311477;PolyPhen=benign(0.002);SIFT=tolerated(0.33);HGNC=OR10AG1	A	G/G,G/G	G	G	-	A/A,A/A	rs76700680	0.96	CpG	-1.85	.	.	149	0.333333	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;BaseQRankSum=-1.176;CAnc=G;CpG;DP=85;Dels=0.00;EUR_AF=0.09;FS=4.929;GAnc=G;GRP=-1.85;HRun=0;HaplotypeScore=2.9992;MQ=37.70;MQ0=0;MQRankSum=0.186;Map20=0.333333;QD=36.61;ReadPosRankSum=-0.371;TS=HPG;TSseq=A,G,G;bSC=149	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2120,129,0:0,2:0,0:38,17:0,0:0:37.70:0;1/1:28:84.26:1077,84,0:0,0:0,0:22,6:0,0:0:37.00:0	-
11_56230120_G/A	11	56230120	A	ENSG00000150269	ENST00000279791	Transcript	NON_SYNONYMOUS_CODING	758	758	253	L/P	cTc/cCc	-	ENSP=ENSP00000279791;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR5M9	G	A/A,A/A	A	A	-	A/A,A/A	rs61902868	0.93	.	3.16	.	.	190	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.15;AMR_AF=0.04;AN=4;CAnc=A;DP=67;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=A;GRP=3.16;HRun=0;HaplotypeScore=0.9789;MQ=37.68;MQ0=0;Map20=1;QD=37.77;TS=HPGC;TSseq=G,A,A,A;UR;bSC=190	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1695,129,0:21,23:0,0:0,0:0,0:0:37.68:0;1/1:23:69.22:904,69,0:13,10:0,0:0,0:0,0:0:37.00:0	-
11_56230328_G/T	11	56230328	T	ENSG00000150269	ENST00000279791	Transcript	NON_SYNONYMOUS_CODING	550	550	184	K/Q	Aag/Cag	-	ENSP=ENSP00000279791;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR5M9	G	T/T,T/T	T	T	-	A/A,A/A	rs61902869	0.93	.	3.25	.	.	190	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.15;AMR_AF=0.04;AN=4;CAnc=T;DP=78;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=T;GRP=3.25;HRun;HaplotypeScore=0.0000;MQ=38.99;MQ0=0;Map20=1;QD=38.23;TS=HPGC;TSseq=G,T,T,T;UR;bSC=190	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2289,175,0:0,0:0,0:0,0:31,27:0:38.99:0;1/1:19:57.19:760,57,0:0,0:0,0:0,0:9,10:0:37.00:0	-
11_56468212_G/A	11	56468212	A	ENSG00000174914	ENST00000312153	Transcript	NON_SYNONYMOUS_CODING	349	349	117	M/V	Atg/Gtg	-	ENSP=ENSP00000309012;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=OR9G1	G	A/A,A/G	A	A	-	A/A,A/H	.	1	CpG	4.54	.	.	232	1	AC=3;AF=0.75;AN=4;CAnc=A;CpG;DP=86;Dels=0.00;FS=0.000;GAnc=A;GRP=4.54;HRun=0;HaplotypeScore=0.9958;MQ=34.48;MQ0=7;Map20=1;QD=30.53;TS=HPGMC;TSseq=G,A,A,A,A;bSC=232	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:1895,156,0:24,35:0,0:0,0:0,0:0:34.48:6;0/1:25:99:301,0,478:7,4:0,0:5,9:0,0:0:36.25:1	+
11_57069568_T/C	11	57069568	C	ENSG00000149115	ENST00000358252	Transcript	NON_SYNONYMOUS_CODING	4967	4814	1605	R/H	cGc/cAc	-	ENSP=ENSP00000350990;PolyPhen=benign(0);SIFT=tolerated(0.91);HGNC=TNKS1BP1	T	C/C,T/T	C	C	C	A/A,H/H	rs35272228	0.97	CpG	4.31	.	.	369	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AMR_AF=0.04;AN=4;CAnc=C;CpG;DP=57;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=4.31;HRun=0;HaplotypeScore=1.9913;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.05;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=369	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1404,108,0:0,0:13,21:0,0:1,0:0:37.00:0;0/0:20:60.19:0,60,788:0,0:0,0:0,0:12,8:0:37.00:0	-
11_58275328_C/T	11	58275328	T	ENSG00000198283	ENST00000360374	Transcript	NON_SYNONYMOUS_CODING	251	251	84	Q/R	cAg/cGg	-	ENSP=ENSP00000353537;PolyPhen=benign(0);SIFT=tolerated(0.06);HGNC=OR5B21	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	-7.81	.	.	285	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=71;GAnc=T;GRP=-7.81;HRun=0;MQ=39.05;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,C,T,T;UR;bSC=285	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,129,1686:0,0:19,24:0,0:0,0:0:39.05:0;1/1:28:84.28:1116,84,0:0,0:0,0:0,0:12,16:0:37.00:0	-
11_58391558_A/G	11	58391558	G	ENSG00000242689	ENST00000361987	Transcript	NON_SYNONYMOUS_CODING	246	166	56	V/M	Gtg/Atg	-	ENSP=ENSP00000355370;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CNTF	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	5.82	.	.	254	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=75;GAnc=G;GRP=5.82;HRun=3;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=254	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:56:99:0,123,2061:35,19:0,0:1,0:1,0:0:37.00:0;1/1:19:57.17:729,57,0:0,0:0,0:12,7:0,0:0:37.00:0	+
11_59612859_T/C	11	59612859	C	ENSG00000134812	ENST00000257248	Transcript	NON_SYNONYMOUS_CODING	116	68	23	R/Q	cGg/cAg	-	ENSP=ENSP00000257248;PolyPhen=benign(0);SIFT=tolerated(0.9);HGNC=GIF	T	C/C,C/C	C	C	C	A/A,A/A	rs35211634	0.92	CpG	-4.43	0.000	0.428	603	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.24;AMR_AF=0.03;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=78;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=-4.43;HRun;HaplotypeScore=0.0000;MQ=38.38;MQ0=0;Map20=1;OAnc=C;QD=37.27;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=603;mSC=0.000;pSC=0.428	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1635,126,0:0,0:23,19:0,0:1,0:0:38.38:0;1/1:35:99:1388,105,0:0,0:17,18:0,0:0,0:0:37.00:0	-
11_59812212_C/A	11	59812212	A	ENSG00000149507	ENST00000278855	Transcript	NON_SYNONYMOUS_CODING	497	312	104	E/D	gaA/gaC	-	ENSP=ENSP00000278855;PolyPhen=benign(0.014);SIFT=tolerated(0.63);HGNC=PLAC1L	C	A/A,A/A	A	A	-	A/A,A/A	.	1	.	-4.07	0.000	0.003	804	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.630;CAnc=A;DP=78;Dels=0.00;FS=3.424;GAnc=A;GRP=-4.07;HRun;HaplotypeScore=2.9825;MQ=42.61;MQ0=0;MQRankSum=-1.260;Map20=1;QD=35.31;ReadPosRankSum=0.079;TS=HPG;TSseq=C,A,A;UR;bSC=804;mSC=0.000;pSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:88.05:1622,88,0:23,19:0,1:0,0:0,0:0:42.61:0;1/1:33:99:1285,99,0:17,16:0,0:0,0:0,0:0:36.69:0	+
11_64813918_C/T	11	64813918	T	ENSG00000168060	ENST00000339885	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	1605	1589	530	Q/R	cAg/cGg	-	ENSP=ENSP00000340111;PolyPhen=benign(0);SIFT=tolerated(0.24);HGNC=NAALADL1	C	T/T,T/T	T	T	T	A/A,A/A	.	1	CpG	-5.44	0.976	0.893	319	1	AC=4;AF=1.00;AN=4;CAnc=T;CpG;DP=71;Dels=0.00;FS=0.000;GAnc=T;GRP=-5.44;HRun=0;HaplotypeScore=0.9665;MQ=37.61;MQ0=0;Map20=1;OAnc=T;QD=38.17;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=319;mSC=0.976;pSC=0.893	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1903,144,0:0,0:0,0:0,0:25,24:0:37.61:0;1/1:22:66.22:873,66,0:0,0:0,0:0,0:12,10:0:37.00:0	-
11_64884957_A/G	11	64884957	G	ENSG00000174276	ENST00000310597	Transcript	NON_SYNONYMOUS_CODING	214	169	57	R/C	Cgc/Tgc	-	ENSP=ENSP00000308548;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZNHIT2	A	G/G,G/G	G	G	G	A/A,A/A	.	1	CpG	3.92	1.000	0.336	243	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=G;GRP=3.92;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.44;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=243;mSC=1.000;pSC=0.336	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1378,105,0:0,0:0,0:18,17:0,0:0:37.00:0;1/1:15:45.14:590,45,0:0,0:0,0:5,10:0,0:0:37.00:0	-
11_64893151_T/C	11	64893151	C	ENSG00000149792	ENST00000526171	Transcript	STOP_GAINED	447	421	141	Q/*	Caa/Taa	-	ENSP=ENSP00000437177;HGNC=MRPL49	T	C/C,C/C	C	C	C	A/A,A/A	.	1	.	-8.27	0.000	0.589	253	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=69;Dels=0.00;FS=0.000;GAnc=C;GRP=-8.27;HRun=0;HaplotypeScore=0.0000;MQ=38.38;MQ0=0;Map20=1;OAnc=C;QD=38.40;TS=HPGOMC;TSseq=T,C,C,C,C,N;UR;bSC=253;mSC=0.000;pSC=0.589	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1684,129,0:0,0:24,19:0,0:0,0:0:38.38:0;1/1:26:78.25:1024,78,0:0,0:16,10:0,0:0,0:0:37.00:0	+
11_65146887_A/G	11	65146887	G	ENSG00000162241	ENST00000294187	Transcript	NON_SYNONYMOUS_CODING	415	173	58	T/M	aCg/aTg	-	ENSP=ENSP00000294187;PolyPhen=benign(0.001);SIFT=tolerated(0.56);HGNC=SLC25A45	A	G/G,G/G	G	G	G	A/A,A/A	rs79141870	0.97	CpG	-0.849	0.001	0.244	420	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.849;HRun=0;HaplotypeScore=1.9699;MQ=37.99;MQ0=0;Map20=1;OAnc=G;QD=36.90;TS=HPGOMC;TSseq=A,G,G,G,A,A;bSC=420;mSC=0.001;pSC=0.244	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:90.25:1140,90,0:0,0:0,0:8,19:0,0:0:37.99:0;1/1:20:57.19:760,57,0:0,1:0,0:12,7:0,0:0:37.00:0	-
11_65154602_A/G	11	65154602	G	ENSG00000126391	ENST00000531296	Transcript	NON_SYNONYMOUS_CODING	236	95	32	R/H	cGc/cAc	-	ENSP=ENSP00000433479;PolyPhen=unknown(0);HGNC=FRMD8	A	G/G,G/G	G	G	G	A/A,A/A	.	1	CpG	1.67	0.000	0.877	414	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=44;Dels=0.00;FS=0.000;GAnc=G;GRP=1.67;HRun=0;HaplotypeScore=1.9864;MQ=40.95;MQ0=0;Map20=1;OAnc=G;QD=38.73;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=414;mSC=0.000;pSC=0.877	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.28:1156,87,0:0,0:0,0:17,12:0,0:0:40.95:0;1/1:15:45.11:554,45,0:0,0:0,0:7,8:0,0:0:37.00:0	+
11_66568548_T/G	11	66568548	G	ENSG00000173715	ENST00000346672	Transcript	NON_SYNONYMOUS_CODING	827	355	119	V/L	Gtg/Ttg	-	ENSP=ENSP00000317408;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C11orf80	T	G/G,G/G	G	G	G	A/A,A/A	rs114055882	0.99	.	4.03	0.990	0.659	59	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;BaseQRankSum=0.000;CAnc=G;DP=67;Dels=0.00;FS=0.000;GAnc=G;GRP=4.03;HRun=0;HaplotypeScore=0.9997;MQ=37.88;MQ0=0;MQRankSum=0.714;Map20=1;OAnc=G;QD=35.65;ReadPosRankSum=1.631;TS=HPGOMC;TSseq=T,G,G,G,-,G;bSC=59;mSC=0.990;pSC=0.659	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:62.32:1245,62,0:0,0:0,0:15,17:0,1:0:37.88:0;1/1:33:99:1300,99,0:0,0:0,0:16,17:0,0:0:37.34:0	+
11_66807561_A/C	11	66807561	C	ENSG00000173227	ENST00000393946	Transcript	NON_SYNONYMOUS_CODING	1670	508	170	H/N	Cac/Aac	-	ENSP=ENSP00000377520;PolyPhen=benign(0);SIFT=tolerated(0.56);HGNC=SYT12	A	A/A,C/C	C	C	C	H/H,A/A	rs11227664	0.94	.	5.63	0.999	0.112	303	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.20;AN=4;ASN_AF=0.06;CAnc=C;DP=62;GAnc=C;GRP=5.63;HRun=0;MQ=38.48;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=303;mSC=0.999;pSC=0.112	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:99:0,114,1486:22,17:0,0:0,0:0,0:0:38.48:0;1/1:22:66.20:857,66,0:0,0:11,11:0,0:0,0:0:37.00:0	+
11_67815012_A/G	11	67815012	G	ENSG00000110719	ENST00000529364	Transcript	NON_SYNONYMOUS_CODING	689	691	231	A/T	Gcc/Acc	-	ENSP=ENSP00000431437;PolyPhen=unknown(0);HGNC=TCIRG1	A	G/G,A/A	G	G	G	A/A,H/H	.	1	.	2.14	0.000	0.088	608	1	AC=2;AF=0.50;AN=4;BaseQRankSum=-1.168;CAnc=G;DP=59;Dels=0.00;FS=3.222;GAnc=G;GRP=2.14;HRun;HaplotypeScore=1.9864;MQ=37.19;MQ0=0;MQRankSum=-0.201;Map20=1;OAnc=G;QD=34.97;ReadPosRankSum=0.363;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=608;mSC=0.000;pSC=0.088	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:86.38:1537,86,0:1,0:0,0:18,22:0,0:0:37.19:0;0/0:16:48.15:0,48,618:10,6:0,0:0,0:0,0:0:37.00:0	+
11_71706544_A/G	11	71706544	G	ENSG00000137522	ENST00000393713	Transcript	NON_SYNONYMOUS_CODING	676	590	197	R/K	aGa/aAa	-	ENSP=ENSP00000377316;PolyPhen=unknown(0);HGNC=RNF121	A	G/G,G/G	G	G	G	A/A,A/A	rs34075366	0.95	.	6.06	1.000	0.983	278	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.05;AMR_AF=0.04;AN=4;ASN_AF=0.09;CAnc=G;DP=61;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=6.06;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.36;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=278;mSC=1.000;pSC=0.983	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1341,105,0:0,0:0,0:21,14:0,0:0:37.00:0;1/1:26:78.25:1023,78,0:0,0:0,0:11,15:0,0:0:37.00:0	+
11_74347299_C/G	11	74347299	G	ENSG00000077514	ENST00000263681	Transcript	NON_SYNONYMOUS_CODING	1306	1177	393	V/L	Gtg/Ctg	-	ENSP=ENSP00000263681;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=POLD3	C	G/C,G/G	G	G	G	A/H,A/A	rs147578662	0.99	.	-2.42	0.093	0.598	422	1	1000gALT=G;AC=3;AF=0.75;AF1000g=0.01;AMR_AF=0.01;AN=4;BaseQRankSum=1.311;CAnc=G;DP=100;Dels=0.00;EUR_AF=0.01;FS=6.834;GAnc=G;GRP=-2.42;HRun=0;HaplotypeScore=0.0000;MQ=39.07;MQ0=0;MQRankSum=0.835;Map20=1;OAnc=G;QD=14.55;ReadPosRankSum=-0.296;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=422;mSC=0.093;pSC=0.598	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:66:99:990,0,1147:0,0:19,16:22,9:0,0:0:39.07:0;1/1:34:99:1335,102,0:0,0:0,0:21,13:0,0:0:37.00:0	+
11_76507403_G/A	11	76507403	A	ENSG00000182704	ENST00000333090	Transcript	NON_SYNONYMOUS_CODING	917	743	248	N/S	aAt/aGt	-	ENSP=ENSP00000332668;PolyPhen=benign(0.035);SIFT=tolerated(0.25);HGNC=TSKU	G	A/A,A/A	A	A	A	A/A,A/A	rs11236938	0.91	.	2.14	0.356	0.128	867	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.22;AMR_AF=0.06;AN=4;ASN_AF=0.07;CAnc=A;DP=51;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=2.14;HRun;HaplotypeScore=0.9987;MQ=37.88;MQ0=0;Map20=1;OAnc=A;QD=36.19;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=867;mSC=0.356;pSC=0.128	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:96.31:1263,96,0:14,20:0,0:0,0:0,0:0:37.88:0;1/1:17:51.16:671,51,0:10,7:0,0:0,0:0,0:0:37.00:0	+
11_76804729_G/A	11	76804729	A	ENSG00000149260	ENST00000278559	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	356	167	56	D/G	gAc/gGc	-	ENSP=ENSP00000278559;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=CAPN5	G	A/A,A/A	A	A	A	A/A,A/A	rs57014785	0.99	.	4.57	0.000	0.043	824	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.07;AN=4;BaseQRankSum=-0.075;CAnc=A;DP=66;Dels=0.00;FS=3.108;GAnc=A;GRP=4.57;HRun=0;HaplotypeScore=0.0000;MQ=37.65;MQ0=0;MQRankSum=-0.226;Map20=1;OAnc=A;QD=36.02;ReadPosRankSum=1.582;TS=HPGOMC;TSseq=G,A,A,N,A,A;UR;bSC=824;mSC=0.000;pSC=0.043	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:95.43:1690,95,0:22,22:0,0:0,1:0,0:0:37.65:0;1/1:20:60.20:795,60,0:8,12:0,0:0,0:0,0:0:37.00:0	+
11_77911715_C/G	11	77911715	G	ENSG00000118369	ENST00000526425	Transcript	NON_SYNONYMOUS_CODING	877	251	84	R/P	cGc/cCc	-	ENSP=ENSP00000434942;PolyPhen=unknown(0);SIFT=tolerated(0.66);HGNC=USP35	C	C/C,G/G	G	G	G	H/H,A/A	rs73507220	0.94	CpG	2.69	0.000	0.912	642	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.23;AMR_AF=0.02;AN=4;CAnc=G;CpG;DP=52;GAnc=G;GRP=2.69;HRun=0;MQ=37.96;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=642;mSC=0.000;pSC=0.912	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:31:93.30:0,93,1216:0,0:16,14:0,0:0,0:0:37.96:0;1/1:21:63.16:792,63,0:0,0:0,0:12,9:0,0:0:37.00:0	+
11_78614351_C/G	11	78614351	G	ENSG00000149256	ENST00000278550	Transcript	NON_SYNONYMOUS_CODING	1174	711	237	D/E	gaC/gaG	-	ENSP=ENSP00000278550;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ODZ4	C	G/G,G/C	G	G	G	A/A,A/H	.	1	.	3.39	0.000	0.824	832	1	AC=3;AF=0.75;AN=4;CAnc=G;DP=48;Dels=0.00;FS=0.000;GAnc=G;GRP=3.39;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.38;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=832;mSC=0.000;pSC=0.824	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1453,111,0:0,0:0,0:17,20:0,0:0:37.00:0;0/1:11:86.91:87,0,287:0,0:3,5:2,1:0,0:0:37.00:0	-
11_88070914_A/G	11	88070914	G	ENSG00000109861	ENST00000527018	Transcript	NON_SYNONYMOUS_CODING	4	5	2	A/V	gCg/gTg	-	ENSP=ENSP00000432556;PolyPhen=unknown(0);HGNC=CTSC	A	A/A,G/G	G	G	G	H/H,A/A	rs11600158	0.96	CpG	-7.61	0.300	0.015	817	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.03;AMR_AF=0.07;AN=4;CAnc=G;CpG;DP=54;EUR_AF=0.07;GAnc=G;GRP=-7.61;HRun=0;MQ=40.77;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=817;mSC=0.300;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,108,1418:18,20:0,0:0,0:0,0:0:40.77:0;1/1:16:45.15:600,45,0:0,0:0,0:8,7:0,1:0:37.00:0	-
11_92895920_T/C	11	92895920	C	ENSG00000180773	ENST00000326402	Transcript	NON_SYNONYMOUS_CODING	1120	989	330	R/H	cGt/cAt	-	ENSP=ENSP00000317382;PolyPhen=benign(0.001);SIFT=tolerated(0.14);HGNC=SLC36A4	T	C/C,T/T	C	C	C	A/A,H/H	rs78676517	0.97	CpG	-3.26	0.000	0.906	698	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.05;AN=4;BaseQRankSum=0.247;CAnc=C;CpG;DP=78;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=-3.26;HRun=0;HaplotypeScore=0.0000;MQ=41.08;MQ0=0;MQRankSum=1.379;Map20=1;OAnc=C;QD=37.54;ReadPosRankSum=-0.884;TS=HPGOMC;TSseq=T,C,C,C,N,T;bSC=698;mSC=0.000;pSC=0.906	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1872,107,0:0,0:31,17:0,0:1,0:0:41.08:0;0/0:29:84.27:0,84,1097:0,0:0,0:0,0:16,13:0:37.00:0	-
11_93430669_C/G	11	93430669	G	ENSG00000166004	ENST00000325212	Transcript	NON_SYNONYMOUS_CODING	2753	2591	864	S/T	aGt/aCt	-	ENSP=ENSP00000316681;PolyPhen=benign(0.002);SIFT=tolerated(0.08);HGNC=KIAA1731	C	G/G,C/C	G	G	G	A/A,H/H	rs78694994	0.98	.	2.76	0.078	0.756	388	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.03;AMR_AF=0.01;AN=4;ASN_AF=0.06;BaseQRankSum=-1.330;CAnc=G;DP=73;Dels=0.00;FS=3.112;GAnc=G;GRP=2.76;HRun=0;HaplotypeScore=1.9995;MQ=37.69;MQ0=0;MQRankSum=-0.121;Map20=1;OAnc=G;QD=36.48;ReadPosRankSum=1.652;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=388;mSC=0.078;pSC=0.756	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.41:1601,89,0:0,0:1,0:20,22:0,0:0:37.69:0;0/0:30:87.28:0,87,1149:0,0:20,10:0,0:0,0:0:37.00:0	+
11_93432858_A/C	11	93432858	C	ENSG00000166004	ENST00000325212	Transcript	NON_SYNONYMOUS_CODING	4942	4780	1594	Q/K	Cag/Aag	-	ENSP=ENSP00000316681;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KIAA1731	A	C/C,A/A	C	C	C	A/A,H/H	rs80145928	0.97	.	2.02	0.014	0.532	388	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.06;BaseQRankSum=0.226;CAnc=C;DP=83;Dels=0.00;FS=0.000;GAnc=C;GRP=2.02;HRun=0;HaplotypeScore=0.9997;MQ=37.65;MQ0=0;MQRankSum=0.000;Map20=1;OAnc=C;QD=36.86;ReadPosRankSum=-0.678;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=388;mSC=0.014;pSC=0.532	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:98.43:1729,98,0:0,1:22,22:0,0:0,0:0:37.65:0;0/0:37:99:0,111,1466:22,15:0,0:0,0:0,0:0:37.00:0	+
11_93454543_G/A	11	93454543	A	ENSG00000166004	ENST00000325212	Transcript	NON_SYNONYMOUS_CODING	5977	5815	1939	T/A	Aca/Gca	-	ENSP=ENSP00000316681;PolyPhen=benign(0.005);SIFT=tolerated(1);HGNC=KIAA1731	G	A/A,G/G	A	A	A	A/A,H/H	rs74976465	0.98	.	-0.399	0.026	0.975	394	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AN=4;ASN_AF=0.06;CAnc=A;DP=64;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.399;HRun=0;HaplotypeScore=0.9979;MQ=39.25;MQ0=0;Map20=1;OAnc=A;QD=34.38;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=394;mSC=0.026;pSC=0.975	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1374,108,0:22,17:0,0:0,0:0,0:0:39.25:0;0/0:25:75.24:0,75,987:0,0:0,0:14,11:0,0:0:37.00:0	+
11_93461895_A/G	11	93461895	G	ENSG00000166004	ENST00000325212	Transcript	NON_SYNONYMOUS_CODING	7372	7210	2404	V/I	Gta/Ata	-	ENSP=ENSP00000316681;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KIAA1731	A	G/G,A/A	G	G	G	A/A,H/H	rs77922978	0.98	.	-0.286	0.000	0.669	398	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.02;AN=4;ASN_AF=0.06;CAnc=G;DP=83;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.286;HRun=0;HaplotypeScore=0.9997;MQ=40.74;MQ0=0;Map20=1;OAnc=G;QD=38.58;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=398;mSC=0.000;pSC=0.669	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1808,138,0:0,0:0,0:25,21:0,0:0:40.74:0;0/0:37:99:0,111,1449:22,15:0,0:0,0:0,0:0:37.00:0	+
11_94278062_A/G	11	94278062	G	ENSG00000196371	ENST00000358752	Transcript	NON_SYNONYMOUS_CODING	1046	763	255	V/I	Gtc/Atc	-	ENSP=ENSP00000351602;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FUT4	A	G/G,G/G	G	G	G	A/A,A/A	rs2230273	0.92	CpG	2.01	0.072	.	754	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.29;AMR_AF=0.03;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=46;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=2.01;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.44;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=754;mSC=0.072	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1306,99,0:0,1:0,0:19,14:0,0:0:37.00:0;1/1:12:36.11:458,36,0:0,0:0,0:6,6:0,0:0:37.00:0	+
11_104761921_T/C	11	104761921	C	ENSG00000204403	ENST00000375726	Transcript	NON_SYNONYMOUS_CODING	899	643	215	V/I	Gtc/Atc	-	ENSP=ENSP00000424038;PolyPhen=possibly_damaging(0.866);SIFT=deleterious(0.05);HGNC=CASP12	T	T/T,C/C	C	C	T	H/H,A/A	rs115100183	0.99	CpG	0.221	0.000	0.147	874	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AN=4;CAnc=C;CpG;DP=90;GAnc=C;GRP=0.221;HRun=0;MQ=38.50;MQ0=0;Map20=1;OAnc=T;TS=HPGOO;TSseq=T,C,C,T,T,T;bSC=874;mSC=0.000;pSC=0.147	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:59:99:0,172,2249:0,0:0,0:0,0:24,35:0:38.50:0;1/1:31:90.29:1186,90,0:0,0:12,19:0,0:0,0:0:37.00:0	-
11_104763117_G/A	11	104763117	A	ENSG00000204403	ENST00000375726	Transcript	STOP_GAINED	629	373	125	R/*	Cga/Tga	-	ENSP=ENSP00000424038;HGNC=CASP12	A	G/G,G/G	G	G	G	A/A,A/A	rs497116	0.96	CpG	-5.99	0.000	0.294	880	1	1000gALT=A;AC=0;AF=0.00;AF1000g=0.96;AFR_AF=0.84;AMR_AF=0.98;AN=4;ASN_AF=1.00;CAnc=G;CpG;DP=79;EUR_AF=1.00;GAnc=G;GRP=-5.99;MQ=38.19;MQ0=0;Map20=1;OAnc=G;TS=HPGOO;TSseq=G,G,G,G,G,G;bSC=880;mSC=0.000;pSC=0.294	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:50:99:0,107,1831:0,1:0,0:26,20:0,0:0:38.19:0;0/0:29:87.28:0,87,1133:0,0:0,0:15,14:0,0:0:37.00:0	-
11_104879628_G/C	11	104879628	C	ENSG00000137757	ENST00000260315	Transcript	NON_SYNONYMOUS_CODING	87	87	29	L/F	ttG/ttC	-	ENSP=ENSP00000260315;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CASP5	G	C/C,C/C	C	C	C	A/A,A/A	rs3181320	0.95	CpG	1.26	0.001	.	889	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.19;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=80;Dels=0.00;FS=0.000;GAnc=C;GRP=1.26;HRun;HaplotypeScore=0.0000;MQ=39.90;MQ0=0;Map20=1;OAnc=C;QD=38.82;TS=HPGO;TSseq=G,C,C,C;bSC=889;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1586,120,0:0,0:20,19:0,0:0,0:0:39.90:0;1/1:40:99:1553,117,0:0,0:17,23:0,0:0,0:0:37.28:0	-
11_107650472_C/T	11	107650472	T	ENSG00000214305	ENST00000398067	Transcript	NON_SYNONYMOUS_CODING	230	230	77	L/P	cTg/cCg	-	ENSP=ENSP00000381142;PolyPhen=benign(0.03);SIFT=deleterious(0.03)	C	T/T,T/T	T	T	T	A/A,A/A	rs7929780	0.98	CpG,RM	-0.47	0.060	0.000	751	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=T;CpG;DP=87;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.47;HRun=0;HaplotypeScore=0.9958;MQ=36.64;MQ0=3;Map20=1;OAnc=T;QD=35.49;RM;TS=HPGOMC;TSseq=C,T,T,C,T,C;bSC=751;mSC=0.060;pSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2021,156,0:0,0:0,0:0,0:31,25:0:36.64:2;1/1:31:90.28:1163,90,0:0,0:0,0:0,0:6,25:0:35.65:1	+
11_109294481_T/G	11	109294481	G	ENSG00000185742	ENST00000327419	Transcript	NON_SYNONYMOUS_CODING	525	122	41	G/V	gGa/gTa	-	ENSP=ENSP00000331581;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C11orf87	T	T/T,G/G	G	G	G	H/H,A/A	.	1	.	3.31	0.007	0.927	645	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=44;GAnc=G;GRP=3.31;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=T,G,G,G,G,-;UR;bSC=645;mSC=0.007;pSC=0.927	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:93.29:0,93,1199:0,0:0,0:0,0:21,10:0:37.00:0;1/1:11:33.11:440,33,0:0,0:0,0:4,7:0,0:0:37.00:0	+
11_113270699_A/G	11	113270699	G	ENSG00000170209	ENST00000303941	Transcript	NON_SYNONYMOUS_CODING	2102	2008	670	G/S	Ggc/Agc	-	ENSP=ENSP00000306678;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ANKK1	A	G/G,G/G	G	G	G	A/A,A/A	rs56006094	0.97	.	4.53	0.018	0.098	648	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.01;AN=4;CAnc=G;DP=42;Dels=0.00;FS=0.000;GAnc=G;GRP=4.53;HRun=2;HaplotypeScore=0.9665;MQ=36.85;MQ0=0;Map20=1;OAnc=G;QD=35.54;TS=HPGOMC;TSseq=A,G,G,G,G,N;bSC=648;mSC=0.018;pSC=0.098	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:26:72.24:957,72,0:0,1:0,0:13,12:0,0:0:36.85:0;1/1:16:48.16:634,48,0:0,0:0,0:10,6:0,0:0:37.00:0	+
11_118772825_T/C	11	118772825	C	ENSG00000186174	ENST00000334801	Transcript	NON_SYNONYMOUS_CODING	2592	1627	543	G/S	Ggc/Agc	-	ENSP=ENSP00000335320;PolyPhen=benign(0);SIFT=tolerated(0.92);HGNC=BCL9L	T	C/C,C/C	C	C	C	A/A,A/A	rs78780803	0.96	.	4.62	1.000	0.915	446	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.11;CAnc=C;DP=57;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=4.62;HRun=3;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.95;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=446;mSC=1.000;pSC=0.915	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1786,135,0:0,0:19,26:0,0:0,0:0:37.00:0;1/1:12:36.12:472,36,0:0,0:7,5:0,0:0,0:0:37.00:0	-
11_119045300_T/G	11	119045300	G	ENSG00000160703	ENST00000292199	Transcript	NON_SYNONYMOUS_CODING	1229	988	330	D/Y	Gac/Tac	-	ENSP=ENSP00000292199;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NLRX1	T	G/G,G/G	G	-	G	A/A,A/A	rs80241894	0.96	.	6.07	.	0.285	239	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.13;AMR_AF=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=1.666;CAnc=G;DP=77;Dels=0.00;FS=0.000;GRP=6.07;HRun;HaplotypeScore=1.9944;MQ=39.25;MQ0=0;MQRankSum=-1.532;Map20=1;OAnc=G;QD=37.00;ReadPosRankSum=-1.466;TS=HPOMC;TSseq=T,G,G,G,G;UR;bSC=239;pSC=0.285	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1957,128,0:0,0:0,0:22,28:0,1:0:39.25:0;1/1:25:75.24:984,75,0:0,0:0,0:9,16:0,0:0:37.00:0	+
11_119059199_G/C	11	119059199	C	ENSG00000172367	ENST00000322712	Transcript	NON_SYNONYMOUS_CODING	965	956	319	A/G	gCg/gGg	-	ENSP=ENSP00000327107;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=PDZD3	G	C/C,C/C	C	-	C	A/A,A/A	rs74670179	0.99	CpG	4.73	.	0.706	225	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=0.269;CAnc=C;CpG;DP=59;Dels=0.00;FS=3.522;GRP=4.73;HRun=0;HaplotypeScore=0.0000;MQ=37.43;MQ0=0;MQRankSum=-1.424;Map20=1;OAnc=C;QD=35.01;ReadPosRankSum=1.270;TS=HPOMC;TSseq=G,C,C,C,N;UR;bSC=225;pSC=0.706	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:95.40:1644,95,0:0,0:19,25:1,0:1,0:0:37.43:0;1/1:13:39.13:520,39,0:0,0:4,9:0,0:0,0:0:37.00:0	+
11_119215586_C/T	11	119215586	T	ENSG00000235718	ENST00000360167	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	922	770	257	H/R	cAc/cGc	-	ENSP=ENSP00000353291;PolyPhen=benign(0);SIFT=tolerated(0.52)	C	T/T,T/T	T	T	T	A/A,A/A	rs61736238	0.97	CpG	4.89	0.032	0.914	565	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.10;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=T;CpG;DP=71;Dels=0.00;FS=0.000;GAnc=T;GRP=4.89;HRun=0;HaplotypeScore=0.5784;MQ=36.79;MQ0=0;Map20=1;OAnc=T;QD=37.27;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=565;mSC=0.032;pSC=0.914	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1859,141,0:0,0:0,0:0,0:25,24:0:36.79:0;1/1:22:66.21:856,66,0:0,0:0,0:0,0:12,10:0:37.00:0	-
11_120769284_A/G	11	120769284	G	ENSG00000149403	ENST00000438375	Transcript	NON_SYNONYMOUS_CODING	1550	1208	403	R/H	cGc/cAc	-	ENSP=ENSP00000404063;PolyPhen=benign(0);SIFT=tolerated(0.75);HGNC=GRIK4	A	A/A,G/G	G	G	G	H/H,A/A	.	1.0	CpG	1.03	.	0.526	889	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;CpG;DP=46;GAnc=G;GRP=1.03;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,A,G,G;UR;bSC=889;pSC=0.526	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:96.31:0,96,1244:18,14:0,0:0,0:0,0:0:37.00:0;1/1:13:39.12:508,39,0:0,0:0,0:6,7:0,0:0:37.00:0	+
11_120973430_A/G	11	120973430	G	ENSG00000109927	ENST00000264037	Transcript	NON_SYNONYMOUS_CODING	56	56	19	R/Q	cGg/cAg	-	ENSP=ENSP00000264037;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TECTA	A	G/G,G/G	G	G	G	A/A,A/A	rs35507522	0.97	CpG	-1.09	0.000	0.877	707	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AN=4;BaseQRankSum=0.666;CAnc=G;CpG;DP=57;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=-1.09;HRun;HaplotypeScore=1.9995;MQ=39.22;MQ0=0;MQRankSum=-0.222;Map20=1;OAnc=G;QD=36.46;ReadPosRankSum=-1.022;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=707;mSC=0.000;pSC=0.877	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:77.37:1455,77,0:0,1:0,0:15,22:0,0:0:39.22:0;1/1:18:54.18:711,54,0:0,0:0,0:5,13:0,0:0:37.00:0	+
11_123900916_C/T	11	123900916	T	ENSG00000234560	ENST00000431524	Transcript	NON_SYNONYMOUS_CODING	620	587	196	I/T	aTt/aCt	-	ENSP=ENSP00000389072;PolyPhen=benign(0);SIFT=tolerated(0.29);HGNC=OR10G8	C	T/C,C/C	T	T	T	A/H,H/H	rs75240316	0.92	.	1.62	0.201	0.006	813	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.08;AFR_AF=0.05;AMR_AF=0.17;AN=4;ASN_AF=0.15;BaseQRankSum=1.110;CAnc=T;DP=94;Dels=0.00;EUR_AF=0.01;FS=7.290;GAnc=T;GRP=1.62;HRun;HaplotypeScore=1.9467;MQ=37.93;MQ0=0;MQRankSum=-0.931;Map20=1;OAnc=T;QD=14.44;ReadPosRankSum=-0.034;TS=HPGOMC;TSseq=C,T,-,T,T,T;UR;bSC=813;mSC=0.201;pSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:64:99:954,0,1159:0,0:14,20:0,0:8,21:0:37.93:0;0/0:30:90.29:0,90,1183:0,0:12,18:0,0:0,0:0:37.00:0	+
11_123909302_G/C	11	123909302	C	ENSG00000182634	ENST00000330487	Transcript	NON_SYNONYMOUS_CODING	416	407	136	S/T	aGt/aCt	-	ENSP=ENSP00000329689;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR10G7	G	C/G,C/G	C	C	C	A/H,A/H	rs513591	0.96	.	2.33	0.002	0.170	835	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.11;AMR_AF=0.01;AN=4;ASN_AF=0.06;BaseQRankSum=0.137;CAnc=C;DP=58;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=2.33;HRun=0;HaplotypeScore=2.5714;MQ=34.89;MQ0=2;MQRankSum=-0.793;Map20=1;OAnc=C;QD=9.96;ReadPosRankSum=-0.109;TS=HPGOMC;TSseq=G,C,N,C,C,C;UR;bSC=835;mSC=0.002;pSC=0.170	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:41:99:438,0,800:0,0:11,7:13,10:0,0:0:34.89:1;0/1:17:99:271,0,272:0,0:5,4:4,4:0,0:0:35.90:1	-
11_128840599_A/T	11	128840599	T	ENSG00000134909	ENST00000310343	Transcript	NON_SYNONYMOUS_CODING	4467	4467	1489	E/D	gaA/gaT	-	ENSP=ENSP00000310561;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ARHGAP32	A	A/A,T/T	T	T	T	H/H,A/A	.	1	.	5.95	0.000	0.954	413	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=96;GAnc=T;GRP=5.95;HRun=2;MQ=37.84;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=A,T,T,T,T,T;UR;bSC=413;mSC=0.000;pSC=0.954	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:59:99:0,178,2285:35,22:0,0:0,0:0,0:0:37.84:0;1/1:37:99:1452,111,0:0,0:0,0:0,0:14,23:0:37.00:0	-
11_129772293_T/G	11	129772293	G	ENSG00000170325	ENST00000304538	Transcript	NON_SYNONYMOUS_CODING	3134	2987	996	T/N	aCc/aAc	-	ENSP=ENSP00000302669;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PRDM10	T	G/G,G/G	G	G	G	A/A,A/A	.	1	.	1.34	0.002	0.977	571	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=65;Dels=0.00;FS=0.000;GAnc=G;GRP=1.34;HRun;HaplotypeScore=0.0000;MQ=37.65;MQ0=0;Map20=1;OAnc=G;QD=36.87;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=571;mSC=0.002;pSC=0.977	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1729,135,0:0,1:0,0:22,22:0,0:0:37.65:0;1/1:19:57.18:734,57,0:0,0:0,0:7,12:0,0:0:37.00:0	-
11_130297748_G/C	11	130297748	C	ENSG00000134917	ENST00000257359	Transcript	NON_SYNONYMOUS_CODING	1141	434	145	G/A	gGt/gCt	-	ENSP=ENSP00000257359;PolyPhen=benign(0.003);SIFT=tolerated(0.32);HGNC=ADAMTS8	G	G/G,C/G	C	C	C	H/H,A/H	rs35468629	0.94	.	-8.36	0.001	0.958	809	1	1000gALT=C;AC=1;AF=0.25;AF1000g=0.06;AFR_AF=0.06;AMR_AF=0.04;AN=4;ASN_AF=0.09;CAnc=C;DP=25;EUR_AF=0.04;GAnc=C;GRP=-8.36;HRun=2;MQ=38.55;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,N,C,C,C;bSC=809;mSC=0.001;pSC=0.958	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:19:57.18:0,57,749:0,0:0,0:9,10:0,0:0:38.55:0;0/1:6:61.95:62,0,142:0,0:0,2:2,2:0,0:0:37.00:0	-
11_130319106_T/G	11	130319106	G	ENSG00000166106	ENST00000299164	Transcript	NON_SYNONYMOUS_CODING	238	238	80	A/S	Gcc/Tcc	-	ENSP=ENSP00000299164;PolyPhen=benign(0.002);SIFT=tolerated(0.34);HGNC=ADAMTS15	T	G/G,G/G	G	G	G	A/A,A/A	rs61733898	0.98	CpG	0.685	0.000	0.756	771	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=46;Dels=0.00;FS=0.000;GAnc=G;GRP=0.685;HRun=0;HaplotypeScore=0.0000;MQ=38.06;MQ0=0;Map20=1;OAnc=G;QD=36.62;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=771;mSC=0.000;pSC=0.756	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:81.26:1058,81,0:0,1:0,0:12,15:0,0:0:38.06:0;1/1:18:54.17:691,54,0:0,0:0,0:9,9:0,0:0:37.00:0	+
11_134019534_A/G	11	134019534	G	ENSG00000166086	ENST00000531698	Transcript	NON_SYNONYMOUS_CODING	305	292	98	A/T	Gca/Aca	-	ENSP=ENSP00000436525;PolyPhen=probably_damaging(0.954);SIFT=deleterious(0);HGNC=JAM3	A	G/G,A/A	G	G	G	A/A,H/H	.	1	CpG	-1.08	0.933	0.004	476	1	AC=2;AF=0.50;AN=4;BaseQRankSum=0.380;CAnc=G;CpG;DP=61;Dels=0.00;FS=3.575;GAnc=G;GRP=-1.08;HRun=0;HaplotypeScore=1.9995;MQ=37.46;MQ0=0;MQRankSum=-0.211;Map20=1;OAnc=G;QD=34.62;ReadPosRankSum=-0.634;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=476;mSC=0.933;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:83.39:1522,83,0:0,2:1,0:23,15:0,0:0:37.46:0;0/0:18:54.17:0,54,697:10,8:0,0:0,0:0,0:0:37.00:0	+
12_1937340_G/A	12	1937340	A	ENSG00000166159	ENST00000299194	Transcript	NON_SYNONYMOUS_CODING	570	26	9	E/G	gAg/gGg	-	ENSP=ENSP00000299194;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LRTM2	G	A/A,A/A	A	A	A	A/A,A/A	rs186004852	1.0	.	3.17	0.848	0.974	900	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.605;CAnc=A;DP=42;Dels=0.00;FS=0.000;GAnc=A;GRP=3.17;HRun=0;HaplotypeScore=0.0000;MQ=36.64;MQ0=0;MQRankSum=-0.578;Map20=1;OAnc=A;QD=34.34;ReadPosRankSum=-1.605;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=900;mSC=0.848;pSC=0.974	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:46.01:995,46,0:14,13:0,0:1,0:0,0:0:36.64:0;1/1:14:42.14:554,42,0:6,8:0,0:0,0:0,0:0:37.00:0	+
12_2908280_A/C	12	2908280	C	ENSG00000004478	ENST00000001008	Transcript	NON_SYNONYMOUS_CODING	728	541	181	Q/K	Cag/Aag	-	ENSP=ENSP00000001008;PolyPhen=benign(0);SIFT=tolerated(0.24);HGNC=FKBP4	A	C/C,A/A	C	C	C	A/A,H/H	.	1	.	4.2	0.003	0.568	705	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=65;Dels=0.00;FS=0.000;GAnc=C;GRP=4.2;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.23;TS=HPGOMC;TSseq=A,C,A,C,C,C;bSC=705;mSC=0.003;pSC=0.568	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1600,120,0:0,0:20,21:0,0:0,0:0:37.00:0;0/0:24:72.23:0,72,933:15,9:0,0:0,0:0,0:0:37.00:0	+
12_2968748_A/G	12	2968748	G	ENSG00000111206	ENST00000342628	Transcript	NON_SYNONYMOUS_CODING	1576	1462	488	L/F	Ctt/Ttt	-	ENSP=ENSP00000342307;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=FOXM1	A	G/G,G/G	G	G	G	A/A,A/A	rs28919868	0.95	.	3.28	0.084	0.070	715	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.21;AMR_AF=0.04;AN=4;BaseQRankSum=-1.237;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=3.28;HRun=0;HaplotypeScore=0.0000;MQ=37.61;MQ0=0;MQRankSum=0.106;Map20=1;OAnc=G;QD=35.98;ReadPosRankSum=0.247;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=715;mSC=0.084;pSC=0.070	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1796,104,0:1,0:0,0:25,23:0,0:0:37.61:0;1/1:26:78.25:1024,78,0:0,0:0,0:13,13:0,0:0:37.00:0	-
12_3747472_C/T	12	3747472	T	ENSG00000130038	ENST00000440314	Transcript	NON_SYNONYMOUS_CODING	1894	1420	474	I/V	Att/Gtt	-	ENSP=ENSP00000409382;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=EFCAB4B	C	T/T,T/T	T	T	T	A/A,A/A	rs117492949	0.99	CpG	4.83	1.000	0.893	929	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=T;CpG;DP=66;Dels=0.00;FS=0.000;GAnc=T;GRP=4.83;HRun=0;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;OAnc=T;QD=36.38;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=929;mSC=1.000;pSC=0.893	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1634,126,0:0,0:0,0:0,0:19,25:0:37.68:0;1/1:22:66.21:865,66,0:0,0:0,0:0,0:10,12:0:37.00:0	-
12_4406979_C/A	12	4406979	A	ENSG00000118971	ENST00000536537	Transcript	NON_SYNONYMOUS_CODING	374	376	126	S/R	Agt/Cgt	-	ENSP=ENSP00000442807;PolyPhen=benign(0);SIFT=tolerated(0.16);HGNC=CCND2	C	A/A,A/A	A	A	A	A/A,A/A	rs80098540	0.97	CpG	-0.786	0.000	0.107	835	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AN=4;ASN_AF=0.12;CAnc=A;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.786;HRun=2;HaplotypeScore=0.0000;MQ=38.35;MQ0=0;Map20=1;OAnc=A;QD=38.74;TS=HPGOMC;TSseq=C,A,A,A,C,A;UR;bSC=835;mSC=0.000;pSC=0.107	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1737,132,0:28,14:0,0:0,0:0,0:0:38.35:0;1/1:19:57.17:727,57,0:11,8:0,0:0,0:0,0:0:37.00:0	+
12_4407061_T/C	12	4407061	C	ENSG00000118971	ENST00000536537	Transcript	NON_SYNONYMOUS_CODING	456	458	153	P/L	cCg/cTg	-	ENSP=ENSP00000442807;PolyPhen=benign(0.003);HGNC=CCND2	T	C/C,C/C	C	C	C	A/A,A/A	rs80021471	0.97	CpG	-3.51	0.000	0.043	829	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AN=4;ASN_AF=0.12;BaseQRankSum=1.588;CAnc=C;CpG;DP=71;Dels=0.00;FS=3.195;GAnc=C;GRP=-3.51;HRun;HaplotypeScore=2.9992;MQ=38.24;MQ0=0;MQRankSum=0.289;Map20=1;OAnc=C;QD=37.65;ReadPosRankSum=1.588;TS=HPGOMC;TSseq=T,C,C,C,C,T;UR;bSC=829;mSC=0.000;pSC=0.043	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1840,104,0:0,0:22,25:0,0:1,0:0:38.24:0;1/1:23:69.20:871,69,0:0,0:12,11:0,0:0,0:0:37.00:0	+
12_4736092_C/T	12	4736092	T	ENSG00000111254	ENST00000228850	Transcript	NON_SYNONYMOUS_CODING	2205	1976	659	N/S	aAc/aGc	-	ENSP=ENSP00000228850;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=AKAP3	C	C/C,T/T	T	T	T	H/H,A/A	.	1	.	0.515	0.007	.	609	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=81;GAnc=T;GRP=0.515;HRun;MQ=38.73;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,C,T;bSC=609;mSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,153,2023:0,0:26,25:0,0:0,0:0:38.73:0;1/1:30:90.29:1178,90,0:0,0:0,0:0,0:12,18:0:37.00:0	-
12_4736612_G/A	12	4736612	A	ENSG00000111254	ENST00000228850	Transcript	NON_SYNONYMOUS_CODING	1685	1456	486	C/R	Tgt/Cgt	-	ENSP=ENSP00000228850;PolyPhen=benign(0.001);SIFT=tolerated(0.18);HGNC=AKAP3	G	A/A,G/G	A	A	A	A/A,H/H	.	1	CpG	-3.37	0.000	.	605	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=77;Dels=0.00;FS=0.000;GAnc=A;GRP=-3.37;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=35.96;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=605;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1543,117,0:19,23:0,0:0,0:0,0:0:37.00:0;0/0:35:99:0,105,1386:0,0:0,0:19,16:0,0:0:37.00:0	-
12_6457332_C/T	12	6457332	T	ENSG00000111319	ENST00000228916	Transcript	NON_SYNONYMOUS_CODING	1816	1717	573	I/V	Atc/Gtc	-	ENSP=ENSP00000228916;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=SCNN1A	C	T/T,C/C	T	T	T	A/A,H/H	rs59142484	1.0	CpG	2.51	.	0.862	867	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.02;AN=4;CAnc=T;CpG;DP=60;Dels=0.00;FS=0.000;GAnc=T;GRP=2.51;HRun=0;HaplotypeScore=0.0000;MQ=37.75;MQ0=0;Map20=1;OAnc=T;QD=36.63;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=867;pSC=0.862	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1498,114,0:0,0:0,0:0,0:25,15:0:37.75:0;0/0:20:57.19:0,57,754:0,0:10,10:0,0:0,0:0:37.00:0	-
12_6883790_G/A	12	6883790	A	ENSG00000089692	ENST00000203629	Transcript	NON_SYNONYMOUS_CODING	874	541	181	T/A	Acc/Gcc	-	ENSP=ENSP00000203629;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LAG3	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	2.03	.	0.331	764	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.678;CAnc=A;DP=73;Dels=0.00;FS=3.617;GAnc=A;GRP=2.03;HRun;HaplotypeScore=0.9916;MQ=38.19;MQ0=0;MQRankSum=-0.151;Map20=1;OAnc=A;QD=33.75;ReadPosRankSum=-1.506;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=764;pSC=0.331	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:98.43:1720,98,0:19,30:0,0:1,0:0,0:0:38.19:0;1/1:23:69.21:890,69,0:5,18:0,0:0,0:0,0:0:37.00:0	+
12_7075631_T/C	12	7075631	C	ENSG00000215021	ENST00000546111	Transcript	NON_SYNONYMOUS_CODING	453	245	82	R/Q	cGg/cAg	-	ENSP=ENSP00000438634;PolyPhen=unknown(0);HGNC=PHB2	T	T/T,C/C	C	C	C	H/H,A/A	rs34735201	0.99	CpG	-11.7	0.105	0.586	658	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=108;GAnc=C;GRP=-11.7;HRun;MQ=37.90;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,A;bSC=658;mSC=0.105;pSC=0.586	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:66:99:0,199,2604:0,0:0,0:0,0:31,35:0:37.90:0;1/1:42:99:1644,126,0:0,0:22,20:0,0:0,0:0:37.00:0	-
12_7254669_A/C	12	7254669	C	ENSG00000139178	ENST00000545280	Transcript	NON_SYNONYMOUS_CODING	103	86	29	G/V	gGt/gTt	-	ENSP=ENSP00000438286;PolyPhen=benign(0.097);HGNC=C1RL	A	C/C,C/C	C	C	C	A/A,A/A	rs3742088	0.91	.	1.88	0.003	0.062	721	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.10;AMR_AF=0.05;AN=4;ASN_AF=0.14;BaseQRankSum=0.236;CAnc=C;DP=77;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=1.88;HRun=2;HaplotypeScore=2.9660;MQ=37.68;MQ0=0;MQRankSum=-1.024;Map20=1;OAnc=C;QD=36.90;ReadPosRankSum=1.575;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=721;mSC=0.003;pSC=0.062	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:92.41:1657,92,0:1,0:23,20:0,0:0,0:0:37.68:0;1/1:33:99:1320,99,0:0,0:21,12:0,0:0,0:0:37.00:0	-
12_13237998_A/G	12	13237998	G	ENSG00000111305	ENST00000324458	Transcript	NON_SYNONYMOUS_CODING	1099	926	309	A/V	gCg/gTg	-	ENSP=ENSP00000320838;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=GSG1	A	A/A,G/G	G	G	G	H/H,A/A	.	1	CpG	0.266	0.000	0.138	733	1	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=55;GAnc=G;GRP=0.266;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,A;UR;bSC=733;mSC=0.000;pSC=0.138	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:65.33:0,65,1300:19,17:0,0:1,0:0,0:0:37.00:0;1/1:18:54.17:712,54,0:0,0:0,0:11,7:0,0:0:37.00:0	-
12_13526305_T/C	12	13526305	C	ENSG00000180861	ENST00000318426	Transcript	NON_SYNONYMOUS_CODING	468	250	84	V/I	Gtt/Att	-	ENSP=ENSP00000443007;PolyPhen=unknown(0);HGNC=C12orf36	T	T/T,C/C	C	C	C	H/H,A/A	rs7308685	0.95	.	-1.42	0.000	0.008	931	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.17;AMR_AF=0.02;AN=4;ASN_AF=0.02;CAnc=C;DP=74;GAnc=C;GRP=-1.42;HRun=2;MQ=41.33;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=931;mSC=0.000;pSC=0.008	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:46:99:0,135,1795:0,0:0,0:0,0:23,23:0:41.33:0;1/1:28:84.27:1093,84,0:0,0:16,12:0,0:0,0:0:37.00:0	-
12_18719972_T/G	12	18719972	G	ENSG00000139144	ENST00000266497	Transcript	NON_SYNONYMOUS_CODING	3907	3869	1290	G/V	gGa/gTa	-	ENSP=ENSP00000266497;PolyPhen=benign(0);SIFT=tolerated(0.93);HGNC=PIK3C2G	T	G/G,T/T	G	G	G	A/A,H/H	rs12099555	0.92	.	4.18	0.917	0.174	845	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.08;AFR_AF=0.27;AMR_AF=0.03;AN=4;BaseQRankSum=0.675;CAnc=G;DP=90;Dels=0.00;EUR_AF=0.02;FS=3.559;GAnc=G;GRP=4.18;HRun;HaplotypeScore=1.9955;MQ=38.01;MQ0=0;MQRankSum=0.734;Map20=1;OAnc=G;QD=37.53;ReadPosRankSum=-0.734;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=845;mSC=0.917;pSC=0.174	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2247,138,0:0,0:0,0:33,25:0,1:0:38.01:0;0/0:31:93.30:0,93,1206:0,0:0,0:0,0:14,17:0:37.00:0	+
12_31478036_C/G	12	31478036	G	ENSG00000177340	ENST00000313737	Transcript	NON_SYNONYMOUS_CODING	787	259	87	D/H	Gac/Cac	-	ENSP=ENSP00000324000;PolyPhen=benign(0)	C	C/C,G/G	G	G	G	H/H,A/A	rs77154299	0.98	.	1.26	0.000	0.020	951	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.02;AN=4;ASN_AF=0.04;CAnc=G;DP=52;EUR_AF=0.01;GAnc=G;GRP=1.26;HRun=0;MQ=37.90;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,C;bSC=951;mSC=0.000;pSC=0.020	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:99:0,99,1300:0,0:15,18:0,0:0,0:0:37.90:0;1/1:19:57.17:732,57,0:0,0:0,0:9,10:0,0:0:37.00:0	+
12_40814107_A/G	12	40814107	G	ENSG00000205592	ENST00000425730	Transcript	NON_SYNONYMOUS_CODING	519	466	156	V/I	Gtt/Att	-	ENSP=ENSP00000395253;PolyPhen=benign(0);SIFT=tolerated(0.28);HGNC=MUC19	A	A/A,G/G	G	G	G	H/H,A/A	rs2114566	0.96	CpG	2.23	0.006	0.363	691	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.15;AN=4;ASN_AF=0.03;CAnc=G;CpG;DP=88;EUR_AF=0.02;GAnc=G;GRP=2.23;HRun=0;MQ=39.17;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=691;mSC=0.006;pSC=0.363	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:63:99:0,178,2296:28,34:0,0:0,0:0,0:0:39.17:0;1/1:25:75.24:976,75,0:0,0:0,0:9,16:0,0:0:37.00:0	+
12_40814197_G/A	12	40814197	A	ENSG00000205592	ENST00000425730	Transcript	NON_SYNONYMOUS_CODING	609	556	186	I/V	Atc/Gtc	-	ENSP=ENSP00000395253;PolyPhen=benign(0.007);SIFT=tolerated(1);HGNC=MUC19	G	G/G,A/A	A	A	A	H/H,A/A	rs17467164	0.96	CpG	-3.01	0.000	0.540	691	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.15;AN=4;ASN_AF=0.03;CAnc=A;CpG;DP=116;EUR_AF=0.02;GAnc=A;GRP=-3.01;HRun=0;MQ=38.46;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=691;mSC=0.000;pSC=0.540	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:81:99:0,186,2864:0,6:0,0:35,40:0,0:0:38.46:0;1/1:35:99:1372,105,0:20,15:0,0:0,0:0,0:0:37.00:0	+
12_40826201_G/A	12	40826201	A	ENSG00000205592	ENST00000425730	Transcript	NON_SYNONYMOUS_CODING	1635	1582	528	I/V	Ata/Gta	-	ENSP=ENSP00000395253;PolyPhen=benign(0.003);SIFT=tolerated(0.54);HGNC=MUC19	G	G/G,A/A	A	A	A	H/H,A/A	rs11564125	0.96	CpG	-4.72	0.000	0.747	700	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.16;AN=4;ASN_AF=0.03;CAnc=A;CpG;DP=84;EUR_AF=0.03;GAnc=A;GRP=-4.72;HRun=0;MQ=37.87;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=700;mSC=0.000;pSC=0.747	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:57:99:0,169,2187:0,1:0,0:28,27:0,0:0:37.87:0;1/1:27:81.27:1089,81,0:11,16:0,0:0,0:0,0:0:38.24:0	+
12_44148490_C/T	12	44148490	T	ENSG00000129317	ENST00000344862	Transcript	NON_SYNONYMOUS_CODING	663	559	187	I/V	Ata/Gta	-	ENSP=ENSP00000343081;PolyPhen=benign(0);SIFT=tolerated(0.72);HGNC=PUS7L	C	C/C,T/T	T	T	T	H/H,A/A	.	1	.	2.84	1.000	0.735	612	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=95;GAnc=T;GRP=2.84;HRun;MQ=38.14;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=612;mSC=1.000;pSC=0.735	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,157,2061:0,0:25,27:0,0:0,0:0:38.14:0;1/1:43:99:1689,129,0:0,0:0,0:0,0:11,32:0:37.00:0	-
12_46321732_T/C	12	46321732	C	ENSG00000139218	ENST00000369367	Transcript	NON_SYNONYMOUS_CODING	1986	1752	584	M/I	atG/atA	-	ENSP=ENSP00000358374;PolyPhen=benign(0.003);SIFT=tolerated(0.52);HGNC=SCAF11	T	C/C,C/C	C	C	C	A/A,A/A	rs115819509	1.0	.	0.443	0.000	0.947	186	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.02;AN=4;CAnc=C;DP=96;Dels=0.00;FS=0.000;GAnc=C;GRP=0.443;HRun=0;HaplotypeScore=0.0000;MQ=38.32;MQ0=0;Map20=1;OAnc=C;QD=38.57;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=186;mSC=0.000;pSC=0.947	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2502,193,0:0,0:30,34:0,0:0,0:0:38.32:0;1/1:32:96.28:1251,96,0:0,0:11,21:0,0:0,0:0:37.00:0	-
12_48596484_A/T	12	48596484	T	ENSG00000172640	ENST00000310248	Transcript	NON_SYNONYMOUS_CODING	687	592	198	R/W	Agg/Tgg	-	ENSP=ENSP00000308689;PolyPhen=benign(0);SIFT=tolerated(0.19);HGNC=OR10AD1	A	T/T,A/A	T	T	T	A/A,H/H	rs75413005	0.95	.	2.31	0.000	0.454	315	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.04;AMR_AF=0.02;AN=4;ASN_AF=0.01;BaseQRankSum=-0.846;CAnc=T;DP=73;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=T;GRP=2.31;HRun=0;HaplotypeScore=1.9156;MQ=38.32;MQ0=0;MQRankSum=0.524;Map20=1;OAnc=T;QD=34.58;ReadPosRankSum=1.168;TS=HPGOMC;TSseq=A,T,T,T,T,-;bSC=315;mSC=0.000;pSC=0.454	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:89.40:1589,89,0:0,1:0,0:0,0:18,26:0:38.32:0;0/0:28:84.28:0,84,1120:19,9:0,0:0,0:0,0:0:37.00:0	-
12_48596546_C/T	12	48596546	T	ENSG00000172640	ENST00000310248	Transcript	NON_SYNONYMOUS_CODING	625	530	177	N/S	aAc/aGc	-	ENSP=ENSP00000308689;PolyPhen=benign(0);SIFT=tolerated(0.19);HGNC=OR10AD1	C	T/T,C/C	T	T	T	A/A,H/H	rs75531856	0.95	.	3.69	0.665	0.523	315	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.04;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=T;DP=74;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=T;GRP=3.69;HRun=3;HaplotypeScore=0.0000;MQ=37.65;MQ0=0;Map20=1;OAnc=T;QD=38.82;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=315;mSC=0.665;pSC=0.523	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1819,138,0:0,0:0,0:0,0:27,19:0:37.65:0;0/0:28:84.27:0,84,1110:0,0:16,12:0,0:0,0:0:37.00:0	-
12_50500919_G/T	12	50500919	T	ENSG00000167588	ENST00000544364	Transcript	NON_SYNONYMOUS_CODING	287	287	96	F/C	tTt/tGt	-	ENSP=ENSP00000442686;PolyPhen=unknown(0);HGNC=GPD1	G	T/T,T/T	T	T	T	A/A,A/A	rs143869720	1.0	.	-0.57	0.000	0.051	243	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.02;AN=4;CAnc=T;DP=68;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.57;HRun;HaplotypeScore=0.0000;MQ=37.46;MQ0=0;Map20=1;OAnc=T;QD=38.23;TS=HPGOMC;TSseq=G,T,T,T,T,T;UR;bSC=243;mSC=0.000;pSC=0.051	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1677,129,0:0,0:0,0:0,0:21,22:0:37.46:0;1/1:25:75.24:981,75,0:0,0:0,0:0,0:13,12:0:37.00:0	+
12_50500948_C/T	12	50500948	T	ENSG00000167588	ENST00000544364	Transcript	NON_SYNONYMOUS_CODING	316	316	106	Y/H	Tac/Cac	-	ENSP=ENSP00000442686;PolyPhen=unknown(0);HGNC=GPD1	C	T/C,T/T	T	T	T	A/H,A/A	.	1	.	-0.101	0.000	0.028	243	1	AC=3;AF=0.75;AN=4;BaseQRankSum=1.506;CAnc=T;DP=55;Dels=0.00;FS=12.329;GAnc=T;GRP=-0.101;HRun=0;HaplotypeScore=1.9955;MQ=37.51;MQ0=0;MQRankSum=-0.248;Map20=1;OAnc=T;QD=14.40;ReadPosRankSum=0.365;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=243;mSC=0.000;pSC=0.028	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:39:99:591,0,659:0,0:8,12:0,0:14,5:0:37.51:0;1/1:16:48.15:628,48,0:0,0:0,0:0,0:7,9:0:37.00:0	+
12_51236901_C/G	12	51236901	G	ENSG00000186452	ENST00000398458	Transcript	NON_SYNONYMOUS_CODING	186	154	52	G/R	Ggg/Cgg	-	ENSP=ENSP00000381476;PolyPhen=benign(0);SIFT=tolerated(0.16);HGNC=TMPRSS12	C	C/C,G/G	G	G	G	H/H,A/A	.	1	CpG	-5.8	0.000	0.009	374	0.333333	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=46;GAnc=G;GRP=-5.8;HRun=2;MQ=40.59;MQ0=0;Map20=0.333333;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,T;UR;bSC=374;mSC=0.000;pSC=0.009	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:32:93.28:0,93,1237:0,0:12,19:0,0:1,0:0:40.59:0;1/1:14:42.12:525,42,0:0,0:0,0:7,7:0,0:0:37.00:0	+
12_53039173_G/C	12	53039173	C	ENSG00000172867	ENST00000309680	Transcript	NON_SYNONYMOUS_CODING	1572	1550	517	G/A	gGc/gCc	-	ENSP=ENSP00000310861;PolyPhen=unknown(0);SIFT=tolerated(0.63);HGNC=KRT2	G	G/G,C/G	C	C	C	H/H,A/H	rs35043606	0.99	.	4.06	0.885	0.955	779	1	1000gALT=C;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=C;DP=80;GAnc=C;GRP=4.06;HRun;MQ=38.80;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,-,C,C,C;bSC=779;mSC=0.885;pSC=0.955	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:49:99:0,144,1884:0,1:0,0:21,27:0,0:0:38.80:0;0/1:31:99:488,0,524:0,0:7,8:7,9:0,0:0:37.00:0	-
12_53900640_A/G	12	53900640	G	ENSG00000139574	ENST00000267017	Transcript	NON_SYNONYMOUS_CODING	426	262	88	R/W	Cgg/Tgg	-	ENSP=ENSP00000267017;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NPFF	A	G/G,G/G	G	G	G	A/A,A/A	rs35822762	0.98	CpG	-2.84	0.064	0.753	192	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.01;AN=4;ASN_AF=0.03;CAnc=G;CpG;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=-2.84;HRun=0;HaplotypeScore=0.0000;MQ=37.66;MQ0=0;Map20=1;OAnc=G;QD=38.28;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=192;mSC=0.064;pSC=0.753	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1756,132,0:0,0:0,0:21,24:0,0:0:37.66:0;1/1:30:90.27:1165,90,0:0,0:0,0:14,16:0,0:0:37.00:0	-
12_54105889_T/G	12	54105889	G	ENSG00000012822	ENST00000262059	Transcript	NON_SYNONYMOUS_CODING	2278	1912	638	P/T	Ccc/Acc	-	ENSP=ENSP00000262059;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CALCOCO1	T	T/T,G/G	G	G	G	H/H,A/A	rs34281379	0.98	.	.	.	.	679	.	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=G;DP=66;GAnc=G;HRun=3;MQ=37.59;MQ0=0;OAnc=G;TS=HPGOMC;TSseq=T,-,G,G,G,G;UR;bSC=679	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,150,1958:0,0:0,0:0,0:26,25:0:37.59:0;1/1:15:45.15:595,45,0:0,0:0,0:7,8:0,0:0:37.00:0	-
12_56740682_C/G	12	56740682	G	ENSG00000170581	ENST00000314128	Transcript	NON_SYNONYMOUS_CODING	1806	1782	594	I/M	atC/atG	-	ENSP=ENSP00000315768;PolyPhen=benign(0);SIFT=tolerated(0.51);HGNC=STAT2	C	G/G,G/G	G	G	G	A/A,A/A	rs2066807	0.95	.	-3.19	0.003	0.573	54	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.01;AMR_AF=0.06;AN=4;ASN_AF=0.04;BaseQRankSum=-0.083;CAnc=G;DP=78;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=-3.19;HRun=0;HaplotypeScore=2.9889;MQ=37.48;MQ0=0;MQRankSum=-0.083;Map20=1;OAnc=G;QD=36.17;ReadPosRankSum=0.825;TS=HPGOM;TSseq=C,G,G,G,G;bSC=54;mSC=0.003;pSC=0.573	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:86.39:1552,86,0:0,0:0,1:19,21:0,0:0:37.48:0;1/1:36:99:1428,108,0:0,0:0,0:20,16:0,0:0:37.00:0	-
12_56755457_G/C	12	56755457	C	ENSG00000175336	ENST00000398189	Transcript	NON_SYNONYMOUS_CODING	611	533	178	G/A	gGt/gCt	-	ENSP=ENSP00000381250;PolyPhen=benign(0);SIFT=tolerated(0.59);HGNC=APOF	G	C/C,C/C	C	C	C	A/A,A/A	rs11575216	0.99	.	-1.89	0.000	0.312	88	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;CAnc=C;DP=61;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.89;HRun;HaplotypeScore=0.0000;MQ=38.44;MQ0=0;Map20=1;OAnc=C;QD=36.95;TS=HPGOM;TSseq=G,C,C,C,C;bSC=88;mSC=0.000;pSC=0.312	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1548,120,0:0,0:20,20:0,0:1,0:0:38.44:0;1/1:20:57.19:754,57,0:0,0:7,13:0,0:0,0:0:37.00:0	-
12_57003964_T/A	12	57003964	A	ENSG00000076108	ENST00000551996	Transcript	STOP_LOST	786	787	263	*/R	Tga/Aga	-	ENSP=ENSP00000447591;HGNC=BAZ2A	T	A/A,A/A	A	A	A	A/A,A/A	rs2230580	0.96	.	-2.82	0.996	0.924	151	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.18;AMR_AF=0.02;AN=4;BaseQRankSum=1.506;CAnc=A;DP=77;Dels=0.00;FS=3.203;GAnc=A;GRP=-2.82;HRun=0;HaplotypeScore=2.9549;MQ=38.26;MQ0=0;MQRankSum=1.356;Map20=1;OAnc=A;QD=36.09;ReadPosRankSum=-1.130;TS=HPGOMC;TSseq=T,A,A,A,A,A;UR;bSC=151;mSC=0.996;pSC=0.924	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1729,107,0:24,22:0,0:0,0:0,0:0:38.26:0;1/1:30:90.28:1178,90,0:17,13:0,0:0,0:0,0:0:37.00:0	-
12_64587684_C/G	12	64587684	G	ENSG00000174206	ENST00000311915	Transcript	NON_SYNONYMOUS_CODING	1304	1276	426	L/V	Ctc/Gtc	-	ENSP=ENSP00000311486;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=C12orf66	C	G/G,C/C	G	G	G	A/A,H/H	rs188114016	1.0	.	3.08	0.999	0.963	601	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.02;AN=4;CAnc=G;DP=92;Dels=0.00;FS=0.000;GAnc=G;GRP=3.08;HRun=0;HaplotypeScore=0.9947;MQ=39.21;MQ0=0;Map20=1;OAnc=G;QD=38.67;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=601;mSC=0.999;pSC=0.963	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2083,160,0:0,0:0,0:25,27:0,0:0:39.21:0;0/0:39:99:0,117,1507:0,0:21,18:0,0:0,0:0:37.00:0	-
12_72050332_G/A	12	72050332	A	ENSG00000133858	ENST00000552037	Transcript	NON_SYNONYMOUS_CODING	1275	1027	343	W/R	Tgg/Cgg	-	ENSP=ENSP00000447976;PolyPhen=possibly_damaging(0.882);SIFT=deleterious(0.03);HGNC=ZFC3H1	G	A/A,A/A	A	A	A	A/A,A/A	rs75740654	0.98	CpG,RM	-2.59	0.000	.	345	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=A;CpG;DP=86;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.59;HRun;HaplotypeScore=0.0000;MQ=38.61;MQ0=0;Map20=1;OAnc=A;QD=39.07;RM;TS=HPGOMC;TSseq=G,A,A,A,C,A;UR;bSC=345;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2182,166,0:35,20:0,0:0,0:0,0:0:38.61:0;1/1:31:93.29:1185,93,0:18,13:0,0:0,0:0,0:0:37.00:0	-
12_82792787_C/A	12	82792787	A	ENSG00000127720	ENST00000248306	Transcript	NON_SYNONYMOUS_CODING	814	745	249	Q/K	Caa/Aaa	-	ENSP=ENSP00000248306;PolyPhen=benign(0.009);SIFT=tolerated(0.36);HGNC=C12orf26	A	C/C,C/C	C	C	C	A/A,A/A	rs4296098	0.93	RM	3.5	0.002	.	703	1	1000gALT=A;AC=0;AF=0.00;AF1000g=0.93;AFR_AF=0.77;AMR_AF=0.96;AN=4;ASN_AF=1.00;CAnc=C;DP=91;EUR_AF=0.96;GAnc=C;GRP=3.5;MQ=39.60;MQ0=0;Map20=1;OAnc=C;RM;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=703;mSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:56:99:0,126,2082:1,0:37,16:0,0:1,0:0:39.60:0;0/0:35:99:0,102,1338:0,0:21,14:0,0:0,0:0:37.00:0	+
12_85277615_A/G	12	85277615	G	ENSG00000072041	ENST00000450363	Transcript	NON_SYNONYMOUS_CODING	1238	779	260	P/L	cCc/cTc	-	ENSP=ENSP00000390706;PolyPhen=possibly_damaging(0.779);SIFT=deleterious(0.02);HGNC=SLC6A15	A	G/G,G/G	G	G	G	A/A,A/A	rs79063785	0.96	.	-2.67	0.000	.	701	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;CAnc=G;DP=79;Dels=0.00;FS=0.000;GAnc=G;GRP=-2.67;HRun=2;HaplotypeScore=0.0000;MQ=40.14;MQ0=0;Map20=1;OAnc=G;QD=37.51;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=701;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1759,135,0:0,0:0,0:25,20:0,0:0:40.14:0;1/1:33:99:1310,99,0:0,0:0,0:19,14:0,0:0:37.00:0	-
12_95451388_T/C	12	95451388	C	ENSG00000120798	ENST00000330677	Transcript	NON_SYNONYMOUS_CODING	889	724	242	V/M	Gtg/Atg	-	ENSP=ENSP00000328843;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NR2C1	T	C/T,C/C	C	C	C	A/H,A/A	.	1.0	CpG	5.75	1.000	.	480	1	1000gALT=C;AC=3;AF=0.75;AF1000g=0.00;AN=4;BaseQRankSum=1.451;CAnc=C;CpG;DP=102;Dels=0.00;FS=6.611;GAnc=C;GRP=5.75;HRun=0;HaplotypeScore=0.0000;MQ=38.81;MQ0=0;MQRankSum=-1.921;Map20=1;OAnc=C;QD=16.53;ReadPosRankSum=-0.215;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=480;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:65:99:1105,0,1014:0,0:17,16:0,0:12,20:0:38.81:0;1/1:37:99:1413,108,0:1,0:17,19:0,0:0,0:0:37.00:0	-
12_96312686_C/A	12	96312686	A	ENSG00000165972	ENST00000344280	Transcript	NON_SYNONYMOUS_CODING	664	106	36	F/V	Ttc/Gtc	-	ENSP=ENSP00000345470;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CCDC38	C	A/A,A/A	A	A	A	A/A,A/A	rs12368787	0.93	.	4.85	1.000	.	773	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.05;AMR_AF=0.07;AN=4;ASN_AF=0.02;BaseQRankSum=1.316;CAnc=A;DP=106;Dels=0.00;EUR_AF=0.13;FS=0.000;GAnc=A;GRP=4.85;HRun=2;HaplotypeScore=0.0000;MQ=38.16;MQ0=0;MQRankSum=-1.640;Map20=1;OAnc=A;QD=37.15;ReadPosRankSum=1.224;TS=HPGOMC;TSseq=C,A,A,A,A,A;UR;bSC=773;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:77:99:2894,181,0:46,30:1,0:0,0:0,0:0:38.16:0;1/1:29:87.28:1140,87,0:13,16:0,0:0,0:0,0:0:37.00:0	-
12_104124018_A/C	12	104124018	C	ENSG00000136011	ENST00000258495	Transcript	NON_SYNONYMOUS_CODING	5411	1268	423	T/N	aCc/aAc	-	ENSP=ENSP00000258495;PolyPhen=benign(0);SIFT=tolerated(0.62);HGNC=STAB2	A	C/C,C/C	C	C	C	A/A,A/A	rs17034433	0.95	.	4.7	0.037	.	856	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.04;AMR_AF=0.09;AN=4;ASN_AF=0.05;CAnc=C;DP=79;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=4.7;HRun;HaplotypeScore=0.0000;MQ=39.82;MQ0=0;Map20=1;OAnc=C;QD=37.86;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=856;mSC=0.037	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1850,144,0:0,0:22,24:0,0:0,0:0:39.82:0;1/1:31:93.31:1240,93,0:0,0:16,15:0,0:0,0:0:37.00:0	+
12_112147397_A/G	12	112147397	G	ENSG00000111271	ENST00000313698	Transcript	NON_SYNONYMOUS_CODING	754	599	200	R/Q	cGg/cAg	-	ENSP=ENSP00000325137;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ACAD10	A	G/G,G/G	G	G	G	A/A,A/A	rs35276160	0.98	CpG	4.99	0.993	.	110	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=80;Dels=0.00;FS=0.000;GAnc=G;GRP=4.99;HRun;HaplotypeScore=2.5773;MQ=38.14;MQ0=0;Map20=1;OAnc=G;QD=38.19;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=110;mSC=0.993	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2019,153,0:0,1:0,0:24,26:0,0:0:38.14:0;1/1:28:84.26:1066,84,0:0,0:0,0:15,13:0,0:0:37.00:0	+
12_113348921_G/T	12	113348921	T	ENSG00000089127	ENST00000202917	Transcript	NON_SYNONYMOUS_CODING	798	535	179	Y/D	Tac/Gac	-	ENSP=ENSP00000202917;PolyPhen=benign(0.007);SIFT=tolerated(1);HGNC=OAS1	G	G/G,T/T	T	T	T	H/H,A/A	.	1.0	CpG	-7.2	0.000	.	873	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=T;CpG;DP=60;GAnc=T;GRP=-7.2;HRun=0;MQ=38.52;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=G,T,T,G,T,T;UR;bSC=873;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:77.37:0,77,1455:0,1:0,0:16,22:0,0:0:38.52:0;1/1:21:63.21:840,63,0:0,0:0,0:0,0:9,12:0:37.00:0	+
12_113863514_A/T	12	113863514	T	ENSG00000257606	ENST00000547342	Transcript	NON_SYNONYMOUS_CODING	264	235	79	I/F	Att/Ttt	-	ENSP=ENSP00000449061;PolyPhen=unknown(0);SIFT=deleterious(0)	A	T/T,T/T	T	T	T	A/A,A/A	rs16942799	0.92	.	-0.841	0.016	.	889	0	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.20;AMR_AF=0.10;AN=4;ASN_AF=0.04;CAnc=T;DP=80;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=-0.841;HRun=0;HaplotypeScore=0.0000;MQ=38.14;MQ0=0;Map20=0;OAnc=T;QD=37.00;TS=HPGOMC;TSseq=A,T,T,T,T,T;UR;bSC=889;mSC=0.016	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1957,150,0:0,0:0,0:1,0:29,22:0:38.14:0;1/1:28:84.27:1098,84,0:0,0:0,0:0,0:13,15:0:37.00:0	-
12_120534992_T/C	12	120534992	C	ENSG00000111737	ENST00000427416	Transcript	NON_SYNONYMOUS_CODING	376	269	90	R/H	cGc/cAc	-	ENSP=ENSP00000415263;PolyPhen=benign(0);HGNC=RAB35	T	C/C,C/C	C	C	C	A/A,A/A	rs192144057	1.0	CpG	0.201	0.089	.	571	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=53;Dels=0.00;FS=0.000;GAnc=C;GRP=0.201;HRun=0;HaplotypeScore=0.9894;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=38.63;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=571;mSC=0.089	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1462,111,0:0,0:11,25:0,0:0,0:0:37.81:0;1/1:16:48.16:632,48,0:0,0:5,11:0,0:0,0:0:37.00:0	-
12_130841638_G/A	12	130841638	A	ENSG00000125207	ENST00000245255	Transcript	NON_SYNONYMOUS_CODING	1852	1580	527	K/R	aAa/aGa	-	ENSP=ENSP00000245255;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=PIWIL1	G	A/A,G/G	A	A	A	A/A,H/H	rs1106042	0.94	.	4.25	1.000	.	819	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.01;AMR_AF=0.03;AN=4;ASN_AF=0.12;CAnc=A;DP=109;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=A;GRP=4.25;HRun=4;HaplotypeScore=0.0000;MQ=38.19;MQ0=0;Map20=1;OAnc=A;QD=39.16;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=819;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:73:99:2892,220,0:41,32:0,0:0,0:0,0:0:38.19:0;0/0:36:99:0,108,1380:0,0:0,0:19,17:0,0:0:37.00:0	+
12_133318406_G/T	12	133318406	T	ENSG00000176915	ENST00000535036	Transcript	NON_SYNONYMOUS_CODING	392	31	11	T/P	Aca/Cca	-	ENSP=ENSP00000437585;PolyPhen=benign(0);SIFT=tolerated(0.51);HGNC=ANKLE2	G	T/T,T/T	T	T	T	A/A,A/A	rs11147040	0.92	.	-2.37	.	.	517	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.16;AMR_AF=0.03;AN=4;ASN_AF=0.09;CAnc=T;DP=102;Dels=0.01;EUR_AF=0.06;FS=0.000;GAnc=T;GRP=-2.37;HRun=2;HaplotypeScore=0.9832;MQ=38.01;MQ0=0;Map20=1;OAnc=T;QD=37.80;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=517	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2263,175,0:0,0:0,0:0,0:24,34:0:38.01:0;1/1:42:99:1657,126,0:0,0:0,0:0,0:18,24:0:37.00:0	-
13_32911463_A/G	13	32911463	G	ENSG00000139618	ENST00000380152	Transcript	NON_SYNONYMOUS_CODING	3204	2971	991	D/N	Gac/Aac	-	ENSP=ENSP00000369497;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=BRCA2	A	G/G,A/A	G	G	G	A/A,H/H	rs1799944	0.94	.	3.08	0.002	0.539	366	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.03;AMR_AF=0.09;AN=4;ASN_AF=0.10;CAnc=G;DP=81;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=3.08;HRun;HaplotypeScore=2.2432;MQ=38.67;MQ0=0;Map20=1;OAnc=G;QD=38.43;TS=HPGOMC;TSseq=A,G,G,G,N,G;UR;bSC=366;mSC=0.002;pSC=0.539	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2070,160,0:0,0:0,0:33,19:0,0:0:38.67:0;0/0:28:84.25:0,84,1076:14,14:0,0:0,0:0,0:0:37.00:0	+
13_33016603_G/T	13	33016603	T	ENSG00000139617	ENST00000380121	Transcript	NON_SYNONYMOUS_CODING	2041	1720	574	S/R	Agt/Cgt	-	ENSP=ENSP00000369464;PolyPhen=benign(0.001);SIFT=tolerated(0.9)	G	T/G,G/G	T	T	T	A/H,H/H	rs34539888	0.94	CpG	-10.1	0.000	0.105	608	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.06;AFR_AF=0.26;AMR_AF=0.03;AN=4;BaseQRankSum=-0.035;CAnc=T;CpG;DP=82;Dels=0.00;FS=2.337;GAnc=T;GRP=-10.1;HRun=0;HaplotypeScore=1.9265;MQ=40.66;MQ0=0;MQRankSum=1.366;Map20=1;OAnc=T;QD=19.87;ReadPosRankSum=0.994;TS=HPGOMC;TSseq=G,T,T,T,T,T;UR;bSC=608;mSC=0.000;pSC=0.105	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:55:99:1123,0,681:0,1:0,0:10,11:19,14:0:40.66:0;0/0:27:81.26:0,81,1072:0,0:0,0:11,16:0,0:0:37.00:0	-
13_36764192_A/G	13	36764192	G	ENSG00000120669	ENST00000317764	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	594	532	178	P/S	Cct/Tct	-	ENSP=ENSP00000326838;PolyPhen=benign(0);SIFT=tolerated(0.38);HGNC=SOHLH2	A	G/A,A/A	G	G	G	A/H,H/H	.	1	.	-0.421	0.852	0.370	812	1	AC=1;AF=0.25;AN=4;BaseQRankSum=-0.415;CAnc=G;DP=84;Dels=0.00;FS=1.236;GAnc=G;GRP=-0.421;HRun;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;MQRankSum=0.817;Map20=1;OAnc=G;QD=10.45;ReadPosRankSum=-0.264;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=812;mSC=0.852;pSC=0.370	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:44:99:490,0,941:17,10:0,0:11,5:0,0:0:37.68:0;0/0:40:99:0,120,1581:22,18:0,0:0,0:0,0:0:37.00:0	-
13_39424253_C/G	13	39424253	G	ENSG00000150893	ENST00000280481	Transcript	NON_SYNONYMOUS_CODING	6674	6458	2153	S/T	aGt/aCt	-	ENSP=ENSP00000280481;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=FREM2	C	G/G,G/G	G	G	G	A/A,A/A	rs9548506	0.94	.	3.13	0.901	0.367	717	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.06;AMR_AF=0.17;AN=4;BaseQRankSum=0.887;CAnc=G;DP=70;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=G;GRP=3.13;HRun=0;HaplotypeScore=5.9633;MQ=37.97;MQ0=0;MQRankSum=0.211;Map20=1;OAnc=G;QD=35.86;ReadPosRankSum=0.718;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=717;mSC=0.901;pSC=0.367	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:83.38:1503,83,0:0,0:1,0:22,18:0,0:0:37.97:0;1/1:29:84.27:1092,84,0:0,0:0,0:20,9:0,0:0:37.00:0	+
13_49281101_T/G	13	49281101	G	ENSG00000152207	ENST00000282018	Transcript	NON_SYNONYMOUS_CODING	151	148	50	V/F	Gtc/Ttc	-	ENSP=ENSP00000282018;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CYSLTR2	T	G/G,T/T	G	G	G	A/A,H/H	rs143085034	1.0	.	1.3	0.933	0.625	675	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AMR_AF=0.01;AN=4;BaseQRankSum=1.769;CAnc=G;DP=93;Dels=0.00;EUR_AF=0.01;FS=2.315;GAnc=G;GRP=1.3;HRun=0;HaplotypeScore=0.9997;MQ=38.55;MQ0=0;MQRankSum=0.590;Map20=1;OAnc=G;QD=35.19;ReadPosRankSum=0.161;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=675;mSC=0.933;pSC=0.625	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:64.83:2039,65,0:0,0:0,0:24,30:2,0:0:38.55:0;0/0:36:99:0,105,1388:0,0:0,0:0,0:18,18:0:37.00:0	+
13_49281785_T/A	13	49281785	A	ENSG00000152207	ENST00000282018	Transcript	NON_SYNONYMOUS_CODING	835	832	278	I/L	Ata/Tta	-	ENSP=ENSP00000282018;PolyPhen=benign(0);SIFT=tolerated(0.22);HGNC=CYSLTR2	T	A/A,T/T	A	A	A	A/A,H/H	rs138722135	1.0	.	0.167	0.000	0.018	675	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=A;DP=91;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=0.167;HRun=0;HaplotypeScore=3.5768;MQ=37.95;MQ0=0;Map20=1;OAnc=A;QD=37.82;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=675;mSC=0.000;pSC=0.018	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2415,184,0:33,30:0,0:0,0:0,0:0:37.95:0;0/0:28:84.27:0,84,1110:0,0:0,0:0,0:17,11:0:37.00:0	+
13_50205140_A/G	13	50205140	G	ENSG00000152213	ENST00000282026	Transcript	NON_SYNONYMOUS_CODING	892	557	186	R/H	cGt/cAt	-	ENSP=ENSP00000282026;PolyPhen=benign(0.004);SIFT=tolerated(0.41);HGNC=ARL11	A	A/A,G/G	G	G	G	H/H,A/A	rs114223009	1.0	CpG	-4.22	0.000	0.004	698	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;CpG;DP=60;GAnc=G;GRP=-4.22;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=698;mSC=0.000;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,123,1602:31,11:0,0:0,0:0,0:0:37.00:0;1/1:18:54.17:691,54,0:0,0:0,0:10,8:0,0:0:37.00:0	+
13_53420344_A/G	13	53420344	G	ENSG00000136099	ENST00000338862	Transcript	NON_SYNONYMOUS_CODING	2297	2228	743	A/V	gCg/gTg	-	ENSP=ENSP00000341350;PolyPhen=benign(0.001);SIFT=tolerated(0.76);HGNC=PCDH8	A	G/G,A/A	G	G	G	A/A,H/H	rs5030685	0.95	CpG	3.59	0.000	0.732	676	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.06;AMR_AF=0.09;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=45;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=G;GRP=3.59;HRun=0;HaplotypeScore=0.7340;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=36.78;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=676;mSC=0.000;pSC=0.732	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:93.29:1210,93,0:0,0:0,0:13,18:0,0:0:37.00:0;0/0:13:36.11:0,36,463:5,8:0,0:0,0:0,0:0:37.00:0	-
13_53421473_T/C	13	53421473	C	ENSG00000136099	ENST00000338862	Transcript	NON_SYNONYMOUS_CODING	1168	1099	367	A/T	Gcc/Acc	-	ENSP=ENSP00000341350;PolyPhen=benign(0.001);SIFT=tolerated(0.78);HGNC=PCDH8	T	C/C,T/T	C	C	C	A/A,H/H	rs9596693	0.95	.	-0.51	0.001	0.629	671	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.08;AMR_AF=0.09;AN=4;CAnc=C;DP=37;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=-0.51;HRun=0;HaplotypeScore=0.0000;MQ=33.48;MQ0;Map20=1;OAnc=C;QD=32.64;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=671;mSC=0.001;pSC=0.629	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:27:78.19:914,78,0:0,0:12,14:0,0:0,0:0:33.48:1;0/0:10:30.10:0,30,400:0,0:0,0:0,0:4,6:0:37.00:0	-
13_84454655_A/C	13	84454655	C	ENSG00000178235	ENST00000377084	Transcript	NON_SYNONYMOUS_CODING	1874	988	330	A/S	Gcc/Tcc	-	ENSP=ENSP00000366288;PolyPhen=benign(0);SIFT=tolerated(0.81);HGNC=SLITRK1	A	C/C,C/C	C	C	C	A/A,A/A	rs145628951	1.0	CpG	4.01	0.044	0.965	518	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=56;Dels=0.00;FS=0.000;GAnc=C;GRP=4.01;HRun=0;HaplotypeScore=2.5768;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.42;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=518;mSC=0.044;pSC=0.965	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1339,102,0:0,0:11,23:0,0:0,0:0:37.00:0;1/1:22:66.21:863,66,0:0,0:11,11:0,0:0,0:0:37.00:0	-
13_86370571_G/A	13	86370571	A	ENSG00000184564	ENST00000400286	Transcript	NON_SYNONYMOUS_CODING	672	73	25	F/L	Ttc/Ctc	-	ENSP=ENSP00000383143;PolyPhen=benign(0.041);SIFT=tolerated(0.25);HGNC=SLITRK6	G	G/G,A/A	A	A	A	H/H,A/A	rs12863734	0.98	.	0.876	0.040	0.085	631	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.04;AMR_AF=0.02;AN=4;CAnc=A;DP=81;EUR_AF=0.01;GAnc=A;GRP=0.876;HRun;MQ=40.27;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=631;mSC=0.040;pSC=0.085	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:53:99:0,159,2033:0,0:0,0:33,20:0,0:0:40.27:0;1/1:28:84.27:1105,84,0:12,16:0,0:0,0:0,0:0:37.00:0	-
13_98829103_A/G	13	98829103	G	ENSG00000139797	ENST00000267291	Transcript	NON_SYNONYMOUS_CODING	417	388	130	R/C	Cgc/Tgc	-	ENSP=ENSP00000267291;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RNF113B	A	A/A,G/A	G	G	G	H/H,A/H	.	1	CpG	0.27	1.000	0.009	958	1	AC=1;AF=0.25;AN=4;CAnc=G;CpG;DP=58;GAnc=G;GRP=0.27;HRun=0;MQ=38.60;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,A,G,G;UR;bSC=958;mSC=1.000;pSC=0.009	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,105,1391:17,20:0,0:0,0:0,0:0:38.60:0;0/1:21:99:193,0,492:8,6:0,0:2,5:0,0:0:37.00:0	-
13_103527849_G/C	13	103527849	C	ENSG00000134899	ENST00000355739	Transcript	NON_SYNONYMOUS_CODING	4580	3157	1053	G/R	Gga/Cga	-	ENSP=ENSP00000347978;PolyPhen=benign(0.283);SIFT=deleterious(0.03);HGNC=ERCC5	C	C/C,G/C	G	G	G	H/H,A/H	rs9514066	1.0	.	4.28	0.057	0.861	615	1	1000gALT=C;AC=3;AF=0.75;AF1000g=1.00;AFR_AF=1.00;AMR_AF=1.00;AN=4;ASN_AF=1.00;CAnc=G;DP=88;Dels=0.00;EUR_AF=1.00;FS=0.000;GAnc=G;GRP=4.28;HRun=0;HaplotypeScore=0.9997;MQ=38.06;MQ0=0;Map20=1;OAnc=G;QD=39.29;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=615;mSC=0.057;pSC=0.861	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2233,169,0:0,0:39,17:0,0:0,0:0:38.06:0;0/1:32:99:427,0,603:0,0:7,6:5,13:1,0:0:37.00:0	+
13_103527930_G/C	13	103527930	C	ENSG00000134899	ENST00000355739	Transcript	NON_SYNONYMOUS_CODING	4661	3238	1080	G/R	Gga/Cga	-	ENSP=ENSP00000347978;PolyPhen=benign(0.001);SIFT=tolerated(0.52);HGNC=ERCC5	C	C/C,G/C	G	G	G	H/H,A/H	rs9514067	1.0	.	0.141	0.000	0.465	615	1	1000gALT=C;AC=3;AF=0.75;AF1000g=1.00;AFR_AF=1.00;AMR_AF=1.00;AN=4;ASN_AF=1.00;CAnc=G;DP=100;Dels=0.00;EUR_AF=1.00;FS=0.000;GAnc=G;GRP=0.141;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=36.30;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=615;mSC=0.000;pSC=0.465	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:66:99:2429,187,0:0,0:37,23:0,0:4,0:0:37.00:0;0/1:34:99:692,0,453:0,0:13,7:8,6:0,0:0:37.00:0	+
13_113975768_T/C	13	113975768	C	ENSG00000185896	ENST00000332556	Transcript	NON_SYNONYMOUS_CODING	1120	926	309	T/I	aCt/aTt	-	ENSP=ENSP00000333298;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=LAMP1	T	C/C,C/C	C	C	C	A/A,A/A	rs9577230	0.94	.	0.566	.	0.804	929	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.09;AMR_AF=0.05;AN=4;ASN_AF=0.13;CAnc=C;DP=64;Dels=0.02;FS=0.000;GAnc=C;GRP=0.566;HRun=0;HaplotypeScore=0.0000;MQ=37.71;MQ0=0;Map20=1;OAnc=C;QD=39.18;TS=HPGOMC;TSseq=T,C,T,C,C,C;UR;bSC=929;pSC=0.804	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1679,126,0:0,0:22,20:0,0:0,0:0:37.71:0;1/1:21:63.20:810,63,0:0,0:10,11:0,0:0,0:0:37.00:0	+
14_20871580_A/G	14	20871580	G	ENSG00000129566	ENST00000262715	Transcript	NON_SYNONYMOUS_CODING	1263	1222	408	R/C	Cgt/Tgt	-	ENSP=ENSP00000262715;PolyPhen=benign(0);SIFT=tolerated(0.35);HGNC=TEP1	A	A/A,G/G	G	G	G	H/H,A/A	.	1	CpG	-5.07	0.000	0.010	749	1	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=74;GAnc=G;GRP=-5.07;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=749;mSC=0.000;pSC=0.010	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:55:99:0,163,2141:27,28:0,0:0,0:0,0:0:37.00:0;1/1:19:57.19:749,57,0:0,0:0,0:10,9:0,0:0:37.00:0	-
14_20978721_A/G	14	20978721	G	ENSG00000182545	ENST00000328444	Transcript	NON_SYNONYMOUS_CODING	110	91	31	A/T	Gca/Aca	-	ENSP=ENSP00000333358;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RNASE10	A	G/G,G/G	G	G	G	A/A,A/A	rs79798350	0.96	.	3.36	0.738	0.537	904	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.10;AMR_AF=0.02;AN=4;BaseQRankSum=-1.591;CAnc=G;DP=76;Dels=0.00;EUR_AF=0.04;FS=3.285;GAnc=G;GRP=3.36;HRun=0;HaplotypeScore=0.0000;MQ=38.80;MQ0=0;MQRankSum=0.813;Map20=1;OAnc=G;QD=37.04;ReadPosRankSum=0.389;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=904;mSC=0.738;pSC=0.537	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1848,107,0:1,0:0,0:22,26:0,0:0:38.80:0;1/1:27:81.24:1043,81,0:0,0:0,0:14,13:0,0:0:37.00:0	+
14_20979022_G/A	14	20979022	A	ENSG00000182545	ENST00000328444	Transcript	NON_SYNONYMOUS_CODING	411	392	131	N/S	aAt/aGt	-	ENSP=ENSP00000333358;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RNASE10	G	A/A,A/A	A	A	A	A/A,A/A	rs2067648	0.96	.	3.7	0.037	0.630	904	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.10;AMR_AF=0.02;AN=4;BaseQRankSum=0.733;CAnc=A;DP=78;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=A;GRP=3.7;HRun;HaplotypeScore=1.6598;MQ=38.80;MQ0=0;MQRankSum=-0.278;Map20=1;OAnc=A;QD=35.61;ReadPosRankSum=-0.379;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=904;mSC=0.037;pSC=0.630	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:67.47:1778,67,0:25,21:0,0:1,1:0,0:0:38.80:0;1/1:29:87.28:1144,87,0:16,13:0,0:0,0:0,0:0:37.00:0	+
14_21553057_T/C	14	21553057	C	ENSG00000165801	ENST00000298693	Transcript	NON_SYNONYMOUS_CODING	3964	3935	1312	T/M	aCg/aTg	-	ENSP=ENSP00000298693;PolyPhen=benign(0);SIFT=tolerated(0.75);HGNC=ARHGEF40	T	C/C,C/C	C	C	T	A/A,A/A	rs943992	0.94	CpG	2.35	0.807	0.913	567	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.13;AMR_AF=0.04;AN=4;ASN_AF=0.02;BaseQRankSum=-0.121;CAnc=C;CpG;DP=66;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=2.35;HRun=0;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;MQRankSum=1.491;Map20=1;OAnc=T;QD=36.72;ReadPosRankSum=1.168;TS=HPGOMC;TSseq=T,C,C,T,T,T;UR;bSC=567;mSC=0.807;pSC=0.913	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.41:1612,89,0:0,0:21,21:0,0:1,0:0:37.00:0;1/1:23:69.22:908,69,0:0,0:16,7:0,0:0,0:0:37.00:0	+
14_22970605_A/G	14	22970605	G	ENSG00000211850	ENST00000390498	Transcript	NON_SYNONYMOUS_CODING	21	22	8	V/M	Gtg/Atg	-	ENSP=ENSP00000452510;PolyPhen=unknown(0);HGNC=TRAJ39	A	A/A,G/G	G	G	G	H/H,A/A	.	1	CpG	-3.41	0.000	0.927	803	1	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=66;GAnc=G;GRP=-3.41;HRun=0;MQ=37.79;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=803;mSC=0.000;pSC=0.927	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,108,1405:20,18:0,0:0,0:0,0:0:37.79:0;1/1:28:84.27:1091,84,0:0,0:0,0:14,14:0,0:0:37.00:0	+
14_23780222_A/G	14	23780222	G	ENSG00000129473	ENST00000556599	Transcript	NON_SYNONYMOUS_CODING	417	419	140	R/H	cGc/cAc	-	ENSP=ENSP00000451197;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=BCL2L2	A	A/A,G/G	G	G	G	H/H,A/A	rs10149339	0.92	CpG	-10	0.000	0.628	498	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.08;AFR_AF=0.28;AMR_AF=0.03;AN=4;ASN_AF=0.03;CAnc=G;CpG;DP=66;EUR_AF=0.02;GAnc=G;GRP=-10;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=498;mSC=0.000;pSC=0.628	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,120,1592:24,17:0,0:0,0:0,0:0:37.00:0;1/1:25:35.23:896,35,0:0,1:0,0:9,15:0,0:0:37.00:0	+
14_24114054_C/T	14	24114054	T	ENSG00000100867	ENST00000250383	Transcript	NON_SYNONYMOUS_CODING	1170	694	232	F/L	Ttc/Ctc	-	ENSP=ENSP00000250383;PolyPhen=benign(0.004);SIFT=tolerated(0.72);HGNC=DHRS2	C	T/T,T/T	T	T	T	A/A,A/A	rs112044307	0.99	.	-9.59	0.000	0.002	883	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=T;DP=94;Dels=0.00;FS=0.000;GAnc=T;GRP=-9.59;HRun;HaplotypeScore=1.9964;MQ=38.77;MQ0=0;Map20=1;OAnc=T;QD=38.44;TS=HPGOMC;TSseq=C,T,T,T,C,T;UR;bSC=883;mSC=0.000;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2032,153,0:0,0:0,0:0,0:25,26:0:38.77:0;1/1:42:99:1660,126,0:0,0:0,0:0,0:18,24:0:37.27:0	+
14_24771293_G/A	14	24771293	A	ENSG00000196943	ENST00000267425	Transcript	NON_SYNONYMOUS_CODING	1024	931	311	S/G	Agt/Ggt	-	ENSP=ENSP00000267425;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C14orf21	G	G/G,A/A	A	A	A	H/H,A/A	rs76058592	0.99	CpG	2.38	0.256	0.414	308	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=A;CpG;DP=62;GAnc=A;GRP=2.38;HRun=0;MQ=37.75;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=308;mSC=0.256;pSC=0.414	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:80.39:0,80,1510:0,1:0,0:19,20:0,0:0:37.75:0;1/1:22:66.21:858,66,0:7,15:0,0:0,0:0,0:0:37.00:0	+
14_25043591_T/A	14	25043591	A	ENSG00000100448	ENST00000216336	Transcript	NON_SYNONYMOUS_CODING	491	454	152	L/M	Ttg/Atg	-	ENSP=ENSP00000216336;PolyPhen=benign(0);SIFT=tolerated(0.6);HGNC=CTSG	T	A/A,T/T	A	A	A	A/A,H/H	.	1	.	-1.38	0.000	0.002	682	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=59;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.38;HRun;HaplotypeScore=0.0000;MQ=36.49;MQ0=0;Map20=1;OAnc=A;QD=38.24;TS=HPGOMC;TSseq=T,A,A,T,G,G;UR;bSC=682;mSC=0.000;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1563,120,0:19,21:0,0:0,0:0,0:0:36.49:0;0/0:19:57.18:0,57,749:0,0:0,0:0,0:6,13:0:37.00:0	-
14_26918100_C/T	14	26918100	T	ENSG00000139910	ENST00000267422	Transcript	NON_SYNONYMOUS_CODING	691	223	75	I/V	Ata/Gta	-	ENSP=ENSP00000267422;PolyPhen=benign(0.029);SIFT=tolerated(1);HGNC=NOVA1	C	T/T,T/T	T	T	T	A/A,A/A	.	1	.	4.53	0.998	0.985	800	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.630;CAnc=T;DP=85;Dels=0.00;FS=0.000;GAnc=T;GRP=4.53;HRun=0;HaplotypeScore=2.9992;MQ=40.27;MQ0=0;MQRankSum=0.350;Map20=1;OAnc=T;QD=35.16;ReadPosRankSum=-0.257;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=800;mSC=0.998;pSC=0.985	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:79.49:1897,79,0:0,0:1,1:0,0:19,32:0:40.27:0;1/1:32:96.31:1266,96,0:0,0:0,0:0,0:19,13:0:37.00:0	-
14_31952754_A/G	14	31952754	G	ENSG00000214943	ENST00000399285	Transcript	STOP_GAINED	418	418	140	R/*	Cga/Tga	-	ENSP=ENSP00000421557;HGNC=GPR33	A	G/G,G/G	G	G	G	A/A,A/A	rs17097921	0.98	CpG	3.15	0.986	0.093	655	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AN=4;ASN_AF=0.06;CAnc=G;CpG;DP=72;Dels=0.00;FS=0.000;GAnc=G;GRP=3.15;HRun;HaplotypeScore=0.0000;MQ=38.19;MQ0=0;Map20=1;OAnc=G;QD=38.99;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=655;mSC=0.986;pSC=0.093	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1983,150,0:0,0:0,0:31,19:0,0:0:38.19:0;1/1:22:66.18:840,66,0:0,0:0,0:8,14:0,0:0:37.00:0	-
14_38194107_A/G	14	38194107	G	ENSG00000139865	ENST00000553443	Transcript	NON_SYNONYMOUS_CODING	1718	1718	573	C/Y	tGt/tAt	-	ENSP=ENSP00000451131;PolyPhen=benign(0);SIFT=tolerated(0.07);HGNC=TTC6	A	G/G,G/G	G	G	G	A/A,A/A	rs34543736	0.96	.	1.4	0.817	0.927	811	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.06;AN=4;CAnc=G;DP=89;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=G;GRP=1.4;HRun=0;HaplotypeScore=0.9867;MQ=37.52;MQ0=0;Map20=1;OAnc=G;QD=38.28;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=811;mSC=0.817;pSC=0.927	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2253,175,0:0,0:0,0:20,37:0,0:0:37.52:0;1/1:31:90.29:1187,90,0:0,0:1,0:11,19:0,0:0:37.00:0	+
14_45696913_C/T	14	45696913	T	ENSG00000129534	ENST00000310806	Transcript	NON_SYNONYMOUS_CODING	2158	1699	567	I/V	Ata/Gta	-	ENSP=ENSP00000309790;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MIS18BP1	C	C/C,T/T	T	T	T	H/H,A/A	rs111929061	0.99	.	0.951	0.056	0.665	321	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AN=4;CAnc=T;DP=102;GAnc=T;GRP=0.951;HRun=2;MQ=37.46;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=321;mSC=0.056;pSC=0.665	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:65:99:0,196,2575:0,0:22,43:0,0:0,0:0:37.46:0;1/1:37:99:1477,111,0:0,0:0,0:0,0:16,21:0:37.00:0	-
14_50298962_T/A	14	50298962	A	ENSG00000165525	ENST00000298310	Transcript	NON_SYNONYMOUS_CODING	1219	769	257	S/C	Agc/Tgc	-	ENSP=ENSP00000298310;PolyPhen=probably_damaging(0.972);SIFT=deleterious(0.03);HGNC=NEMF	A	T/T,T/T	T	T	T	A/A,A/A	rs3100906	0.93	.	5.33	1.000	0.856	405	1	1000gALT=A;AC=0;AF=0.00;AF1000g=0.93;AFR_AF=0.76;AMR_AF=0.97;AN=4;ASN_AF=0.98;CAnc=T;DP=99;EUR_AF=1.00;GAnc=T;GRP=5.33;MQ=39.09;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=405;mSC=1.000;pSC=0.856	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:70:99:0,208,2719:0,0:0,0:0,0:25,42:0:39.09:0;0/0:29:87.28:0,87,1139:0,0:0,0:0,0:14,15:0:37.39:0	-
14_50798969_C/G	14	50798969	G	ENSG00000100490	ENST00000534267	Transcript	STOP_GAINED	420	422	141	S/*	tCa/tGa	-	ENSP=ENSP00000435044;HGNC=CDKL1	C	G/G,G/G	G	G	G	A/A,A/A	rs74049391	0.98	.	1.17	0.006	0.241	433	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=G;DP=73;Dels=0.00;FS=0.000;GAnc=G;GRP=1.17;HRun=0;HaplotypeScore=0.0000;MQ=38.19;MQ0=0;Map20=1;OAnc=G;QD=38.65;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=433;mSC=0.006;pSC=0.241	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1966,150,0:0,0:0,0:21,29:0,0:0:38.19:0;1/1:23:66.21:863,66,0:0,0:0,0:11,11:1,0:0:37.00:0	-
14_50799045_T/C	14	50799045	C	ENSG00000100490	ENST00000395834	Transcript	NON_SYNONYMOUS_CODING	932	904	302	D/N	Gac/Aac	-	ENSP=ENSP00000379176;PolyPhen=benign(0);SIFT=tolerated(0.76);HGNC=CDKL1	T	C/C,C/C	C	C	C	A/A,A/A	rs61746924	0.98	.	4.25	0.547	0.783	433	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=C;DP=79;Dels=0.00;FS=0.000;GAnc=C;GRP=4.25;HRun=0;HaplotypeScore=1.9156;MQ=38.54;MQ0=0;Map20=1;OAnc=C;QD=38.58;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=433;mSC=0.547;pSC=0.783	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:2000,153,0:0,0:26,25:0,0:0,0:0:38.54:0;1/1:28:84.27:1107,84,0:0,0:15,13:0,0:0,0:0:37.00:0	-
14_56044061_C/T	14	56044061	T	ENSG00000186615	ENST00000335142	Transcript	NON_SYNONYMOUS_CODING	308	10	4	T/A	Act/Gct	-	ENSP=ENSP00000451586;PolyPhen=benign(0);HGNC=KTN1-AS1	C	C/C,T/T	T	T	T	H/H,A/A	rs10142739	0.99	.	1.61	0.001	0.060	551	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=T;DP=76;GAnc=T;GRP=1.61;HRun;MQ=38.92;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,C;UR;bSC=551;mSC=0.001;pSC=0.060	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:46:99:0,138,1818:0,0:23,23:0,0:0,0:0:38.92:0;1/1:30:90.29:1170,90,0:0,0:0,0:0,0:13,17:0:36.66:0	-
14_58060707_T/C	14	58060707	C	ENSG00000151812	ENST00000339762	Transcript	NON_SYNONYMOUS_CODING	347	347	116	R/Q	cGa/cAa	-	ENSP=ENSP00000342518;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLC35F4	T	T/T,C/C	C	C	C	H/H,A/A	rs145246618	1.0	CpG	5.83	1.000	0.960	809	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;CpG;DP=89;GAnc=C;GRP=5.83;HRun=0;MQ=38.14;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=809;mSC=1.000;pSC=0.960	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,153,2006:0,0:0,0:0,0:13,39:0:38.14:0;1/1:37:99:1436,111,0:0,0:14,23:0,0:0,0:0:37.00:0	-
14_58937416_T/C	14	58937416	C	ENSG00000100578	ENST00000261244	Transcript	NON_SYNONYMOUS_CODING	2575	2300	767	L/P	cTt/cCt	-	ENSP=ENSP00000261244;PolyPhen=benign(0);SIFT=tolerated(0.31);HGNC=KIAA0586	C	T/T,T/T	T	T	T	A/A,A/A	rs1748986	0.98	.	2.02	0.016	0.412	317	1	1000gALT=C;AC=0;AF=0.00;AF1000g=0.98;AFR_AF=0.92;AMR_AF=0.99;AN=4;ASN_AF=0.98;CAnc=T;DP=78;EUR_AF=1.00;GAnc=T;GRP=2.02;MQ=37.65;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=317;mSC=0.016;pSC=0.412	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:46:99:0,138,1804:0,0:0,0:0,0:23,23:0:37.65:0;0/0:32:96.31:0,96,1273:0,0:0,0:0,0:16,16:0:37.00:0	+
14_59930503_A/G	14	59930503	G	ENSG00000181619	ENST00000395116	Transcript	NON_SYNONYMOUS_CODING	1558	1442	481	A/V	gCg/gTg	-	ENSP=ENSP00000378548;PolyPhen=benign(0.001);SIFT=tolerated(0.51);HGNC=GPR135	A	A/A,G/G	G	G	G	H/H,A/A	rs1752427	0.98	CpG	-6.06	0.000	0.069	506	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.09;AN=4;CAnc=G;CpG;DP=46;GAnc=G;GRP=-6.06;HRun=0;MQ=38.78;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,N,G,G,G,A;UR;bSC=506;mSC=0.000;pSC=0.069	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:93.30:0,93,1211:12,20:0,0:0,0:0,0:0:38.78:0;1/1:13:39.11:494,39,0:0,0:0,0:7,6:0,0:0:36.22:0	-
14_60524662_G/A	14	60524662	A	ENSG00000131951	ENST00000445360	Transcript	NON_SYNONYMOUS_CODING	4402	4198	1400	K/E	Aag/Gag	-	ENSP=ENSP00000454748;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LRRC9	G	A/A,G/G	A	A	A	A/A,H/H	rs77893491	0.98	.	5.54	0.998	0.294	292	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AMR_AF=0.01;AN=4;ASN_AF=0.07;CAnc=A;DP=98;Dels=0.00;FS=0.000;GAnc=A;GRP=5.54;HRun;HaplotypeScore=0.0000;MQ=38.16;MQ0=0;Map20=1;OAnc=A;QD=39.39;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=292;mSC=0.998;pSC=0.294	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2436,184,0:37,24:0,0:0,0:0,0:0:38.16:0;0/0:37:99:0,111,1458:0,0:0,0:20,17:0,0:0:37.00:0	+
14_61924239_G/A	14	61924239	A	ENSG00000027075	ENST00000332981	Transcript	NON_SYNONYMOUS_CODING	1505	1120	374	I/V	Ata/Gta	-	ENSP=ENSP00000329127;PolyPhen=benign(0);SIFT=tolerated(0.4);HGNC=PRKCH	G	A/A,A/A	A	A	A	A/A,A/A	rs2230500	0.94	.	4.6	0.196	0.779	832	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AMR_AF=0.01;AN=4;ASN_AF=0.22;CAnc=A;DP=73;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=4.6;HRun;HaplotypeScore=0.0000;MQ=37.66;MQ0=0;Map20=1;OAnc=A;QD=38.99;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=832;mSC=0.196;pSC=0.779	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1788,135,0:27,18:0,0:0,0:0,0:0:37.66:0;1/1:28:84.27:1106,84,0:13,15:0,0:0,0:0,0:0:37.00:0	+
14_64591831_C/G	14	64591831	G	ENSG00000054654	ENST00000344113	Transcript	NON_SYNONYMOUS_CODING	13669	13457	4486	S/T	aGt/aCt	-	ENSP=ENSP00000341781;PolyPhen=benign(0);HGNC=SYNE2	C	G/G,C/C	G	G	G	A/A,H/H	.	1	.	2.93	0.318	0.029	430	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=84;Dels=0.00;FS=0.000;GAnc=G;GRP=2.93;HRun=0;HaplotypeScore=0.9997;MQ=38.08;MQ0=0;Map20=1;OAnc=G;QD=38.46;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=430;mSC=0.318;pSC=0.029	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2148,166,0:0,0:0,0:31,23:0,0:0:38.08:0;0/0:29:87.28:0,87,1155:0,0:20,9:0,0:0,0:0:37.00:0	+
14_74754936_G/A	14	74754936	A	ENSG00000119688	ENST00000556517	Transcript	NON_SYNONYMOUS_CODING	424	425	142	V/A	gTc/gCc	-	ENSP=ENSP00000450960;PolyPhen=unknown(0);SIFT=tolerated(0.15);HGNC=ABCD4	G	G/G,A/A	A	A	A	H/H,A/A	rs57773157	0.94	.	-0.192	1.000	0.948	571	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.25;AMR_AF=0.02;AN=4;CAnc=A;DP=73;GAnc=A;GRP=-0.192;HRun=0;MQ=38.96;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=571;mSC=1.000;pSC=0.948	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,132,1716:0,0:0,0:24,21:0,0:0:38.96:0;1/1:28:81.24:1038,81,0:13,15:0,0:0,0:0,0:0:37.00:0	-
14_74766360_T/C	14	74766360	C	ENSG00000119688	ENST00000356924	Transcript	NON_SYNONYMOUS_CODING	320	176	59	R/Q	cGg/cAg	-	ENSP=ENSP00000349396;PolyPhen=benign(0.029);SIFT=tolerated(0.9);HGNC=ABCD4	T	T/T,C/C	C	C	C	H/H,A/A	rs58272575	0.94	CpG	2.1	0.997	0.825	567	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.26;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=75;GAnc=C;GRP=2.1;HRun=2;MQ=38.19;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,T,T;UR;bSC=567;mSC=0.997;pSC=0.825	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:50:99:0,147,1936:0,0:0,0:0,0:24,26:0:38.19:0;1/1:25:72.22:936,72,0:0,0:9,16:0,0:0,0:0:37.00:0	-
14_75537692_T/A	14	75537692	A	ENSG00000119703	ENST00000238686	Transcript	NON_SYNONYMOUS_CODING	608	416	139	Y/F	tAc/tTc	-	ENSP=ENSP00000238686;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZC2HC1C	T	A/A,T/T	A	A	A	A/A,H/H	.	1	.	4.72	0.998	0.492	98	1	AC=2;AF=0.50;AN=4;BaseQRankSum=-0.258;CAnc=A;DP=81;Dels=0.00;FS=3.104;GAnc=A;GRP=4.72;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.659;Map20=1;OAnc=A;QD=35.13;ReadPosRankSum=-0.848;TS=HPGOMC;TSseq=T,A,A,A,A,A;bSC=98;mSC=0.998;pSC=0.492	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1790,101,0:23,24:0,0:0,0:0,1:0:37.00:0;0/0:31:90.27:0,90,1145:0,0:0,0:0,0:13,18:0:37.00:0	+
14_76249759_A/G	14	76249759	G	ENSG00000119685	ENST00000286653	Transcript	NON_SYNONYMOUS_CODING	3147	91	31	A/T	Gct/Act	-	ENSP=ENSP00000286653;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TTLL5	A	G/G,G/G	G	G	G	A/A,A/A	rs148677697	1.0	.	4.03	0.579	0.666	551	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;DP=55;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=4.03;HRun=0;HaplotypeScore=0.0000;MQ=36.87;MQ0=0;Map20=1;OAnc=G;QD=38.63;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=551;mSC=0.579;pSC=0.666	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1462,111,0:0,0:0,0:25,12:0,0:0:36.87:0;1/1:18:54.17:698,54,0:0,0:0,0:7,11:0,0:0:37.00:0	+
14_80971261_C/T	14	80971261	T	ENSG00000100629	ENST00000281129	Transcript	NON_SYNONYMOUS_CODING	3346	3175	1059	M/V	Atg/Gtg	-	ENSP=ENSP00000281129;PolyPhen=benign(0.002);SIFT=tolerated(0.43);HGNC=CEP128	C	T/T,T/T	T	T	T	A/A,A/A	rs61744330	0.94	CpG	1.57	1.000	0.706	714	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.17;AMR_AF=0.02;AN=4;CAnc=T;CpG;DP=69;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=1.57;HRun=0;HaplotypeScore=0.9997;MQ=39.65;MQ0=0;Map20=1;OAnc=T;QD=38.07;TS=HPGOMC;TSseq=C,T,T,T,T,A;UR;bSC=714;mSC=1.000;pSC=0.706	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1708,129,0:0,0:0,0:0,0:26,18:0:39.65:0;1/1:25:75.24:986,75,0:0,0:0,0:0,0:9,16:0:37.00:0	-
14_91717259_A/G	14	91717259	G	ENSG00000258875	ENST00000554096	Transcript	NON_SYNONYMOUS_CODING	444	293	98	R/K	aGg/aAg	-	ENSP=ENSP00000451438;PolyPhen=unknown(0)	A	G/G,G/G	G	G	G	A/A,A/A	rs28764190	0.96	RM	1.72	0.000	0.023	798	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.13;AMR_AF=0.02;AN=4;BaseQRankSum=0.578;CAnc=G;DP=66;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=1.72;HRun;HaplotypeScore=0.0000;MQ=39.97;MQ0=0;MQRankSum=1.377;Map20=1;OAnc=G;QD=36.29;RM;ReadPosRankSum=-1.200;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=798;mSC=0.000;pSC=0.023	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:77.37:1448,77,0:0,1:0,0:16,22:0,0:0:39.97:0;1/1:27:81.23:1036,81,0:0,0:0,0:13,14:0,0:0:37.00:0	+
14_93119232_G/C	14	93119232	C	ENSG00000100599	ENST00000216487	Transcript	NON_SYNONYMOUS_CODING	1997	1838	613	A/G	gCc/gGc	-	ENSP=ENSP00000216487;PolyPhen=benign(0.011);SIFT=tolerated(0.92);HGNC=RIN3	G	C/C,G/G	C	C	C	A/A,H/H	rs12434929	0.97	.	1.27	0.001	0.966	923	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=C;DP=62;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=1.27;HRun;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.79;TS=HPGOMC;TSseq=G,C,C,C,C,CC;UR;bSC=923;mSC=0.001;pSC=0.966	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1507,114,0:0,0:21,16:0,0:0,0:0:37.00:0;0/0:24:72.22:0,72,930:0,0:0,0:13,11:0,0:0:37.00:0	+
14_96773164_A/G	14	96773164	G	ENSG00000066739	ENST00000359933	Transcript	NON_SYNONYMOUS_CODING	5287	4393	1465	P/S	Ccc/Tcc	-	ENSP=ENSP00000353010;PolyPhen=benign(0);SIFT=tolerated(0.35);HGNC=ATG2B	A	G/A,G/G	G	G	G	A/H,A/A	rs143695335	0.99	.	1.65	0.816	0.313	436	1	1000gALT=G;AC=3;AF=0.75;AF1000g=0.01;AN=4;ASN_AF=0.04;BaseQRankSum=0.013;CAnc=G;DP=70;Dels=0.00;FS=0.000;GAnc=G;GRP=1.65;HRun=2;HaplotypeScore=0.9997;MQ=39.05;MQ0=0;MQRankSum=0.281;Map20=1;OAnc=G;QD=10.53;ReadPosRankSum=0.735;TS=HPGOMC;TSseq=A,G,G,G,G,-;UR;bSC=436;mSC=0.816;pSC=0.313	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:43:99:483,0,846:12,14:0,0:9,8:0,0:0:39.05:0;1/1:27:81.26:1061,81,0:0,0:0,0:16,11:0,0:0:37.00:0	-
14_105398392_G/A	14	105398392	A	ENSG00000166428	ENST00000392593	Transcript	NON_SYNONYMOUS_CODING	1270	1102	368	S/G	Agc/Ggc	-	ENSP=ENSP00000376372;PolyPhen=benign(0.003);SIFT=tolerated(0.34);HGNC=PLD4	G	A/A,A/A	A	A	A	A/A,A/A	rs74316182	0.98	CpG	0.129	0.000	.	964	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.03;BaseQRankSum=0.578;CAnc=A;CpG;DP=41;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=0.129;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-0.144;Map20=1;OAnc=A;QD=34.58;ReadPosRankSum=-1.734;TS=HPGOMC;TSseq=G,N,A,A,A,G;bSC=964;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:24:32.22:863,32,0:11,12:0,0:0,1:0,0:0:37.00:0;1/1:17:48.16:640,48,0:7,10:0,0:0,0:0,0:0:37.00:0	+
14_105517492_C/G	14	105517492	G	ENSG00000183484	ENST00000329797	Transcript	NON_SYNONYMOUS_CODING	1894	982	328	Q/E	Cag/Gag	-	ENSP=ENSP00000328818;PolyPhen=benign(0);SIFT=tolerated(0.61);HGNC=GPR132	C	G/G,G/G	G	G	G	A/A,A/A	.	1	.	-3.5	0.000	0.434	946	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=77;Dels=0.00;FS=0.000;GAnc=G;GRP=-3.5;HRun=0;HaplotypeScore=1.9662;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.78;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=946;mSC=0.000;pSC=0.434	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1856,141,0:0,0:0,0:13,34:0,0:0:37.00:0;1/1:30:90.29:1185,90,0:0,0:0,0:15,15:0,0:0:37.00:0	-
14_105849557_C/T	14	105849557	T	ENSG00000179364	ENST00000551743	Transcript	NON_SYNONYMOUS_CODING	102	17	6	V/A	gTt/gCt	-	ENSP=ENSP00000449254;PolyPhen=unknown(0);HGNC=PACS2	C	C/C,T/T	T	T	T	H/H,A/A	rs111775845	0.95	.	-4.02	0.000	0.123	982	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.21;AMR_AF=0.01;AN=4;CAnc=T;DP=46;GAnc=T;GRP=-4.02;HRun=2;MQ=36.70;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=982;mSC=0.000;pSC=0.123	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:34:72.69:0,73,1252:0,1:16,16:0,0:0,0:0:36.70:0;1/1:12:36.12:480,36,0:0,0:0,0:0,0:5,7:0:37.00:0	+
15_33445450_A/C	15	33445450	C	ENSG00000248905	ENST00000320930	Transcript	NON_SYNONYMOUS_CODING	2133	1666	556	G/C	Ggt/Tgt	-	ENSP=ENSP00000325166;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FMN1	A	A/A,C/C	C	C	C	H/H,A/A	rs61746221	0.97	.	-1.2	0.000	0.972	688	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.02;AN=4;CAnc=C;DP=65;GAnc=C;GRP=-1.2;HRun;MQ=38.38;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=688;mSC=0.000;pSC=0.972	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,129,1702:20,23:0,0:0,0:0,0:0:38.38:0;1/1:22:66.21:855,66,0:0,0:10,12:0,0:0,0:0:37.00:0	-
15_34646769_G/A	15	34646769	A	ENSG00000184507	ENST00000333756	Transcript	NON_SYNONYMOUS_CODING	1269	1114	372	I/V	Att/Gtt	-	ENSP=ENSP00000329448;PolyPhen=benign(0.001);SIFT=tolerated(0.61);HGNC=C15orf55	G	A/A,A/A	A	A	A	A/A,A/A	rs61737334	0.98	.	-7.24	0.000	0.200	715	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.01;AN=4;BaseQRankSum=1.125;CAnc=A;DP=75;Dels=0.00;EUR_AF=0.02;FS=7.710;GAnc=A;GRP=-7.24;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=0.317;Map20=1;OAnc=A;QD=34.30;ReadPosRankSum=-0.144;TS=HPGOMC;TSseq=G,A,A,A,A,G;bSC=715;mSC=0.000;pSC=0.200	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:49.41:1542,49,0:25,16:1,0:0,2:0,0:0:37.00:0;1/1:31:93.30:1229,93,0:14,17:0,0:0,0:0,0:0:37.00:0	+
15_40912860_G/A	15	40912860	A	ENSG00000137812	ENST00000260369	Transcript	NON_SYNONYMOUS_CODING	788	398	133	H/R	cAt/cGt	-	ENSP=ENSP00000260369;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CASC5	G	A/A,A/A	A	A	A	A/A,A/A	.	1	CpG	3.7	0.525	0.825	163	1	AC=4;AF=1.00;AN=4;CAnc=A;CpG;DP=99;Dels=0.00;FS=0.000;GAnc=A;GRP=3.7;HRun=0;HaplotypeScore=0.9997;MQ=38.61;MQ0=0;Map20=1;OAnc=A;QD=37.52;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=163;mSC=0.525;pSC=0.825	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2097,160,0:25,30:0,0:0,0:0,0:0:38.61:0;1/1:44:99:1744,132,0:20,24:0,0:0,0:0,0:0:37.00:0	+
15_40915640_A/G	15	40915640	G	ENSG00000137812	ENST00000260369	Transcript	NON_SYNONYMOUS_CODING	3568	3178	1060	G/S	Ggc/Agc	-	ENSP=ENSP00000260369;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=CASC5	A	G/G,G/G	G	G	G	A/A,A/A	.	1	.	4.12	0.675	0.686	149	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=94;Dels=0.00;FS=0.000;GAnc=G;GRP=4.12;HRun;HaplotypeScore=0.9967;MQ=39.69;MQ0=0;Map20=1;OAnc=G;QD=38.37;TS=HPGOMC;TSseq=A,G,-,G,G,G;bSC=149;mSC=0.675;pSC=0.686	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2105,163,0:0,0:0,0:37,16:0,0:0:39.69:0;1/1:40:80.38:1488,80,0:0,1:0,0:22,17:0,0:0:37.00:0	+
15_41797721_G/T	15	41797721	T	ENSG00000062524	ENST00000263800	Transcript	NON_SYNONYMOUS_CODING	1802	1705	569	S/R	Agc/Cgc	-	ENSP=ENSP00000263800;PolyPhen=benign(0);SIFT=tolerated(0.51);HGNC=LTK	G	T/T,T/T	T	T	T	A/A,A/A	rs148513655	0.99	CpG	4.53	1.000	0.891	228	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.03;AN=4;ASN_AF=0.03;CAnc=T;CpG;DP=71;Dels=0.00;FS=0.000;GAnc=T;GRP=4.53;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=37.89;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=228;mSC=1.000;pSC=0.891	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1511,114,0:0,0:0,0:0,0:24,14:0:37.00:0;1/1:32:96.31:1264,96,0:0,0:0,0:0,0:15,17:0:37.00:0	-
15_42148736_A/G	15	42148736	G	ENSG00000137877	ENST00000320955	Transcript	NON_SYNONYMOUS_CODING	9097	8869	2957	H/Y	Cac/Tac	-	ENSP=ENSP00000317790;PolyPhen=benign(0);SIFT=tolerated(0.93);HGNC=SPTBN5	A	G/G,G/G	G	-	G	A/A,A/A	rs61733880	0.96	.	5.19	0.606	.	258	0.5	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.13;AMR_AF=0.02;AN=4;CAnc=G;DP=45;Dels=0.00;EUR_AF=0.03;FS=0.000;GRP=5.19;HRun=0;HaplotypeScore=0.0000;MQ=37.60;MQ0=0;Map20=0.5;OAnc=G;QD=37.47;TS=HPOMC;TSseq=A,G,G,G,G;bSC=258;mSC=0.606	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1269,99,0:0,0:0,0:16,16:0,0:0:37.60:0;1/1:12:36.12:480,36,0:0,0:0,0:7,5:0,0:0:37.00:0	-
15_42158646_C/T	15	42158646	T	ENSG00000137877	ENST00000320955	Transcript	NON_SYNONYMOUS_CODING	6754	6526	2176	I/V	Atc/Gtc	-	ENSP=ENSP00000317790;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPTBN5	C	C/C,T/T	T	-	T	H/H,A/A	.	1	.	-3.74	0.000	.	314	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=55;GRP=-3.74;HRun=0;MQ=37.85;MQ0=0;Map20=1;OAnc=T;TS=HPOMC;TSseq=C,T,T,T,T;UR;bSC=314;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:35:99:0,105,1382:0,0:21,14:0,0:0,0:0:37.85:0;1/1:20:60.20:794,60,0:0,0:0,0:0,0:6,14:0:37.00:0	-
15_42363012_G/C	15	42363012	C	ENSG00000159337	ENST00000290472	Transcript	NON_SYNONYMOUS_CODING	2041	1946	649	G/A	gGc/gCc	-	ENSP=ENSP00000290472;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=PLA2G4D	G	C/C,G/G	C	-	C	A/A,H/H	rs17690899	0.94	.	1.22	0.009	0.001	450	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.02;AMR_AF=0.09;AN=4;CAnc=C;DP=62;Dels=0.00;EUR_AF=0.11;FS=0.000;GRP=1.22;HRun;HaplotypeScore=0.0000;MQ=38.38;MQ0=0;Map20=1;OAnc=C;QD=37.14;TS=HPOMC;TSseq=G,C,C,C,C;bSC=450;mSC=0.009;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1630,126,0:0,0:22,21:0,0:0,0:0:38.38:0;0/0:19:57.17:0,57,734:0,0:0,0:7,12:0,0:0:37.00:0	-
15_42363043_T/G	15	42363043	G	ENSG00000159337	ENST00000290472	Transcript	NON_SYNONYMOUS_CODING	2010	1915	639	Q/K	Cag/Aag	-	ENSP=ENSP00000290472;PolyPhen=benign(0);SIFT=tolerated(0.72);HGNC=PLA2G4D	T	G/G,T/T	G	-	G	A/A,H/H	rs74678783	0.94	.	2.95	0.000	0.030	450	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.02;AMR_AF=0.09;AN=4;CAnc=G;DP=54;Dels=0.02;EUR_AF=0.11;FS=0.000;GRP=2.95;HRun=5;HaplotypeScore=0.9947;MQ=38.52;MQ0=0;Map20=1;OAnc=G;QD=37.43;TS=HPOMC;TSseq=T,G,G,G,G;bSC=450;mSC=0.000;pSC=0.030	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1493,114,0:0,0:0,0:20,18:0,0:0:38.52:0;0/0:15:45.15:0,45,594:0,0:0,0:0,0:7,8:0:37.00:0	-
15_42363078_T/C	15	42363078	C	ENSG00000159337	ENST00000290472	Transcript	NON_SYNONYMOUS_CODING	1975	1880	627	C/Y	tGc/tAc	-	ENSP=ENSP00000290472;PolyPhen=benign(0);SIFT=tolerated(0.31);HGNC=PLA2G4D	T	C/C,T/T	C	-	C	A/A,H/H	rs77186114	0.94	.	2.85	0.000	0.038	450	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.02;AMR_AF=0.09;AN=4;CAnc=C;DP=62;Dels=0.00;EUR_AF=0.11;FS=0.000;GRP=2.85;HRun=0;HaplotypeScore=0.9967;MQ=36.95;MQ0=0;Map20=1;OAnc=C;QD=37.88;TS=HPOMC;TSseq=T,C,C,C,C;bSC=450;mSC=0.000;pSC=0.038	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1548,117,0:1,0:20,19:0,0:0,0:0:36.95:0;0/0:22:66.22:0,66,873:0,0:0,0:0,0:14,8:0:37.00:0	-
15_42524065_T/C	15	42524065	C	ENSG00000103978	ENST00000566014	Transcript	NON_SYNONYMOUS_CODING	287	289	97	I/V	Att/Gtt	-	ENSP=ENSP00000457308;PolyPhen=benign(0.016);SIFT=tolerated(0.08);HGNC=TMEM87A	C	T/T,T/T	T	T	T	A/A,A/A	rs1630294	0.91	.	0.563	0.998	0.895	92	1	1000gALT=C;AC=0;AF=0.00;AF1000g=0.91;AFR_AF=0.82;AMR_AF=0.88;AN=4;ASN_AF=0.91;CAnc=T;DP=88;EUR_AF=1.00;GAnc=T;GRP=0.563;MQ=38.53;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=92;mSC=0.998;pSC=0.895	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:58:99:0,169,2205:0,0:0,0:0,0:30,27:0:38.53:0;0/0:30:90.29:0,90,1165:0,0:0,0:0,0:13,17:0:37.00:0	-
15_42985549_A/G	15	42985549	G	ENSG00000159433	ENST00000290607	Transcript	NON_SYNONYMOUS_CODING	11830	11773	3925	A/T	Gct/Act	-	ENSP=ENSP00000290607;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=STARD9	A	G/G,G/G	G	G	G	A/A,A/A	.	1	.	-2.51	0.000	0.113	18	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.578;CAnc=G;DP=57;Dels=0.00;FS=3.310;GAnc=G;GRP=-2.51;HRun=0;HaplotypeScore=0.9997;MQ=36.87;MQ0=0;MQRankSum=1.502;Map20=1;OAnc=G;QD=35.89;ReadPosRankSum=-0.462;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=18;mSC=0.000;pSC=0.113	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:50.29:1110,50,0:1,0:0,0:13,16:0,0:0:36.87:0;1/1:27:81.25:1043,81,0:0,0:0,0:16,11:0,0:0:37.00:0	+
15_44967847_A/G	15	44967847	G	ENSG00000229474	ENST00000434130	Transcript	NON_SYNONYMOUS_CODING	157	59	20	P/L	cCg/cTg	-	ENSP=ENSP00000416673;PolyPhen=benign(0.002);SIFT=tolerated(0.13);HGNC=PATL2	A	G/G,A/A	G	G	A	A/A,H/H	rs77918503	0.94	CpG	-5.99	0.000	0.195	126	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.16;AMR_AF=0.01;AN=4;ASN_AF=0.07;CAnc=G;CpG;DP=65;Dels=0.00;FS=0.000;GAnc=G;GRP=-5.99;HRun;HaplotypeScore=3.1397;MQ=38.08;MQ0=0;Map20=1;OAnc=A;QD=36.49;TS=HPGOMC;TSseq=A,G,G,A,A,A;bSC=126;mSC=0.000;pSC=0.195	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1712,132,0:0,1:0,0:20,24:0,0:0:38.08:0;0/0:19:57.18:0,57,746:7,12:0,0:0,0:0,0:0:37.00:0	-
15_48441554_T/C	15	48441554	C	ENSG00000104177	ENST00000267836	Transcript	NON_SYNONYMOUS_CODING	1437	1321	441	G/S	Ggc/Agc	-	ENSP=ENSP00000267836;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MYEF2	T	C/C,C/C	C	C	C	A/A,A/A	rs36075490	0.93	.	4.9	1.000	0.985	344	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.15;AMR_AF=0.10;AN=4;ASN_AF=0.06;CAnc=C;DP=79;Dels=0.00;FS=0.000;GAnc=C;GRP=4.9;HRun;HaplotypeScore=0.0000;MQ=38.26;MQ0=0;Map20=1;OAnc=C;QD=38.68;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=344;mSC=1.000;pSC=0.985	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1851,141,0:0,0:30,17:0,0:0,0:0:38.26:0;1/1:32:96.31:1256,96,0:0,0:14,18:0,0:0,0:0:37.00:0	-
15_48499987_G/A	15	48499987	A	ENSG00000074803	ENST00000330289	Transcript	NON_SYNONYMOUS_CODING	257	71	24	N/S	aAt/aGt	-	ENSP=ENSP00000331550;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLC12A1	G	A/A,A/A	A	A	A	A/A,A/A	rs35342218	1.0	.	5.37	0.997	0.937	477	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=0.774;CAnc=A;DP=85;Dels=0.00;FS=0.000;GAnc=A;GRP=5.37;HRun;HaplotypeScore=3.9325;MQ=38.24;MQ0=0;MQRankSum=0.922;Map20=1;OAnc=A;QD=36.08;ReadPosRankSum=-0.111;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=477;mSC=0.997;pSC=0.937	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1765,101,0:33,14:0,0:1,0:0,0:0:38.24:0;1/1:37:71.36:1396,71,0:15,21:0,0:0,1:0,0:0:37.00:0	+
15_62932556_G/C	15	62932556	C	ENSG00000259458	ENST00000558940	Transcript	STOP_LOST	781	56	19	*/S	tGa/tCa	-	ENSP=ENSP00000454033	G	C/G,C/C	C	C	C	A/H,A/A	rs35757182	0.96	.	1.78	0.000	0.015	883	1	1000gALT=C;AC=3;AF=0.75;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.07;AN=4;BaseQRankSum=0.193;CAnc=C;DP=74;Dels=0.00;EUR_AF=0.07;FS=1.145;GAnc=C;GRP=1.78;HRun=0;HaplotypeScore=0.9997;MQ=38.32;MQ0=0;MQRankSum=0.421;Map20=1;OAnc=C;QD=17.21;ReadPosRankSum=-0.921;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=883;mSC=0.000;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:45:99:805,0,671:0,0:13,11:10,11:0,0:0:38.32:0;1/1:29:87.27:1121,87,0:0,0:12,17:0,0:0,0:0:37.00:0	-
15_65917355_T/G	15	65917355	G	ENSG00000074621	ENST00000261892	Transcript	NON_SYNONYMOUS_CODING	1224	937	313	V/L	Gtg/Ttg	-	ENSP=ENSP00000261892;PolyPhen=unknown(0);SIFT=tolerated(0.32);HGNC=SLC24A1	T	T/T,G/G	G	G	G	H/H,A/A	rs35571449	0.95	.	1.33	0.000	0.171	185	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.07;AMR_AF=0.04;AN=4;ASN_AF=0.04;CAnc=G;DP=63;EUR_AF=0.04;GAnc=G;GRP=1.33;HRun;MQ=38.32;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=T,G,G,G,A,A;UR;bSC=185;mSC=0.000;pSC=0.171	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,129,1680:0,0:0,0:0,0:26,19:0:38.32:0;1/1:18:54.18:720,54,0:0,0:0,0:8,10:0,0:0:37.00:0	+
15_65983405_A/C	15	65983405	C	ENSG00000174485	ENST00000431932	Transcript	NON_SYNONYMOUS_CODING	3604	3395	1132	G/V	gGa/gTa	-	ENSP=ENSP00000396830;PolyPhen=benign(0);SIFT=tolerated(0.4);HGNC=DENND4A	A	A/A,C/C	C	C	C	H/H,A/A	rs74023361	1.0	.	3.55	0.040	0.966	180	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=91;GAnc=C;GRP=3.55;HRun;MQ=38.03;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=180;mSC=0.040;pSC=0.966	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:58:99:0,169,2221:23,35:0,0:0,0:0,0:0:38.03:0;1/1:33:96.30:1247,96,0:0,0:12,20:0,0:0,1:0:37.00:0	-
15_74488388_C/G	15	74488388	G	ENSG00000137868	ENST00000323940	Transcript	NON_SYNONYMOUS_CODING	613	367	123	P/A	Cca/Gca	-	ENSP=ENSP00000326085;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=STRA6	C	C/C,G/G	G	G	G	H/H,A/A	rs115067613	0.99	CpG	4.32	0.967	0.173	823	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=50;GAnc=G;GRP=4.32;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=823;mSC=0.967;pSC=0.173	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:28:84.26:0,84,1090:0,0:17,11:0,0:0,0:0:37.00:0;1/1:22:66.22:880,66,0:0,0:0,0:14,8:0,0:0:37.00:0	-
15_75111530_G/A	15	75111530	A	ENSG00000140506	ENST00000309664	Transcript	NON_SYNONYMOUS_CODING	774	635	212	D/G	gAt/gGt	-	ENSP=ENSP00000310431;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LMAN1L	G	A/A,G/G	A	A	A	A/A,H/H	rs62621375	0.93	.	5.67	0.028	0.144	402	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.29;AMR_AF=0.01;AN=4;CAnc=A;DP=64;Dels=0.00;FS=0.000;GAnc=A;GRP=5.67;HRun=0;HaplotypeScore=0.0000;MQ=37.77;MQ0=0;Map20=1;OAnc=A;QD=36.76;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=402;mSC=0.028;pSC=0.144	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1467,111,0:12,27:0,0:0,0:0,0:0:37.77:0;0/0:25:75.24:0,75,990:0,0:0,0:11,14:0,0:0:36.60:0	+
15_75117900_T/C	15	75117900	C	ENSG00000140506	ENST00000309664	Transcript	NON_SYNONYMOUS_CODING	1674	1535	512	P/L	cCg/cTg	-	ENSP=ENSP00000310431;PolyPhen=benign(0);SIFT=tolerated(0.09);HGNC=LMAN1L	T	T/T,C/C	C	C	C	H/H,A/A	.	1	CpG	2.68	0.168	0.186	403	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=51;GAnc=C;GRP=2.68;HRun=3;MQ=38.78;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=403;mSC=0.168;pSC=0.186	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:96.30:0,96,1265:0,0:0,0:0,0:16,16:0:38.78:0;1/1:18:48.15:615,48,0:0,0:9,9:0,0:0,0:0:37.00:0	+
15_81173308_G/A	15	81173308	A	ENSG00000103888	ENST00000220244	Transcript	NON_SYNONYMOUS_CODING	736	448	150	T/A	Act/Gct	-	ENSP=ENSP00000220244;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KIAA1199	G	A/A,A/A	A	A	A	A/A,A/A	.	1	CpG	3.11	0.032	0.464	917	1	AC=4;AF=1.00;AN=4;CAnc=A;CpG;DP=76;Dels=0.00;FS=0.000;GAnc=A;GRP=3.11;HRun=0;HaplotypeScore=0.0000;MQ=38.70;MQ0=0;Map20=1;OAnc=A;QD=37.08;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=917;mSC=0.032;pSC=0.464	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1961,150,0:23,29:0,0:0,0:0,0:0:38.70:0;1/1:24:72.23:945,72,0:10,14:0,0:0,0:0,0:0:37.00:0	+
15_86273754_C/A	15	86273754	A	ENSG00000170776	ENST00000361243	Transcript	NON_SYNONYMOUS_CODING	7191	7110	2370	Q/H	caA/caC	-	ENSP=ENSP00000354718;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=AKAP13	C	C/C,A/A	A	A	A	H/H,A/A	rs78553737	0.99	.	-5.03	0.630	0.964	516	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=A;DP=95;GAnc=A;GRP=-5.03;HRun;MQ=38.43;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=C,A,A,A,A,A;bSC=516;mSC=0.630;pSC=0.964	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:62:99:0,187,2471:0,0:31,31:0,0:0,0:0:38.43:0;1/1:33:99:1315,99,0:21,12:0,0:0,0:0,0:0:37.00:0	+
15_99512787_T/C	15	99512787	C	ENSG00000183571	ENST00000378919	Transcript	NON_SYNONYMOUS_CODING	444	238	80	G/S	Ggc/Agc	-	ENSP=ENSP00000368199;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PGPEP1L	T	C/C,T/T	C	C	C	A/A,H/H	.	1	CpG	4.37	0.338	0.018	779	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=66;Dels=0.00;FS=0.000;GAnc=C;GRP=4.37;HRun;HaplotypeScore=0.9997;MQ=38.34;MQ0=0;Map20=1;OAnc=C;QD=38.88;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=779;mSC=0.338;pSC=0.018	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1666,126,0:0,0:27,15:0,0:0,0:0:38.34:0;0/0:24:72.23:0,72,943:0,0:0,0:0,0:9,15:0:37.00:0	-
15_99679642_G/A	15	99679642	A	ENSG00000103852	ENST00000394130	Transcript	NON_SYNONYMOUS_CODING	1951	1174	392	F/L	Ttt/Ctt	-	ENSP=ENSP00000377688;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TTC23	G	A/A,G/G	A	A	A	A/A,H/H	.	1.0	.	4.01	0.000	0.246	707	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=A;DP=80;Dels=0.00;FS=0.000;GAnc=A;GRP=4.01;HRun=2;HaplotypeScore=0.0000;MQ=38.16;MQ0=0;Map20=1;OAnc=A;QD=38.83;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=707;mSC=0.000;pSC=0.246	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:2013,153,0:27,24:0,0:0,0:0,0:0:38.16:0;0/0:29:87.28:0,87,1151:0,0:0,0:12,17:0,0:0:37.00:0	-
15_101605845_A/G	15	101605845	G	ENSG00000154237	ENST00000284395	Transcript	NON_SYNONYMOUS_CODING	5594	5194	1732	V/M	Gtg/Atg	-	ENSP=ENSP00000284395;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LRRK1	A	G/G,A/A	G	G	G	A/A,H/H	rs3829706	0.99	CpG	2.75	0.022	0.243	779	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AN=4;ASN_AF=0.03;CAnc=G;CpG;DP=51;Dels=0.00;FS=0.000;GAnc=G;GRP=2.75;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.61;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=779;mSC=0.022;pSC=0.243	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.30:1230,93,0:0,0:0,0:21,10:0,0:0:37.00:0;0/0:20:60.19:0,60,777:9,11:0,0:0,0:0,0:0:37.00:0	+
16_417457_C/G	16	417457	G	ENSG00000086504	ENST00000429738	Transcript	NON_SYNONYMOUS_CODING	249	100	34	H/D	Cac/Gac	-	ENSP=ENSP00000414038;PolyPhen=unknown(0);HGNC=MRPL28	C	G/C,C/C	G	G	G	A/H,H/H	.	1	CpG	0.207	.	0.013	792	1	AC=1;AF=0.25;AN=4;BaseQRankSum=0.296;CAnc=G;CpG;DP=58;Dels=0.00;FS=4.643;GAnc=G;GRP=0.207;HRun=4;HaplotypeScore=0.9997;MQ=37.75;MQ0=0;MQRankSum=-0.549;Map20=1;OAnc=G;QD=14.20;ReadPosRankSum=0.070;TS=HPGOMC;TSseq=C,G,G,-,G,G;bSC=792;pSC=0.013	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:40:99:598,0,717:0,0:8,13:10,8:1,0:0:37.75:0;0/0:18:54.17:0,54,702:0,0:11,7:0,0:0,0:0:37.00:0	-
16_598118_T/C	16	598118	C	ENSG00000103326	ENST00000219611	Transcript	NON_SYNONYMOUS_CODING	1643	1280	427	P/L	cCg/cTg	-	ENSP=ENSP00000219611;PolyPhen=benign(0.003);SIFT=tolerated(0.56);HGNC=SOLH	T	C/C,C/C	C	C	C	A/A,A/A	rs116683117	0.97	CpG	.	.	.	.	.	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.08;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=39;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;OAnc=C;QD=38.65;TS=HPGOMC;TSseq=T,-,C,C,C,C	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.28:1154,87,0:0,0:12,17:0,0:0,0:0:37.00:0;1/1:10:30.09:370,30,0:0,0:6,4:0,0:0,0:0:37.00:0	+
16_1502857_C/T	16	1502857	T	ENSG00000103249	ENST00000262318	Transcript	NON_SYNONYMOUS_CODING	1263	1180	394	M/V	Atg/Gtg	-	ENSP=ENSP00000262318;PolyPhen=benign(0.152);SIFT=tolerated(0.42);HGNC=CLCN7	C	T/T,C/C	T	T	T	A/A,H/H	rs12926089	0.91	CpG	2.86	1.000	0.092	774	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.16;AMR_AF=0.10;AN=4;CAnc=T;CpG;DP=57;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=T;GRP=2.86;HRun=0;HaplotypeScore=0.9958;MQ=37.23;MQ0=0;Map20=1;OAnc=T;QD=35.39;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=774;mSC=1.000;pSC=0.092	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1555,120,0:0,0:0,0:0,0:27,15:0:37.23:0;0/0:14:42.13:0,42,551:0,0:4,10:0,0:0,0:0:37.00:0	-
16_2049878_C/T	16	2049878	T	ENSG00000167962	ENST00000431526	Transcript	NON_SYNONYMOUS_CODING	1687	1672	558	S/G	Agc/Ggc	-	ENSP=ENSP00000411409;PolyPhen=benign(0.083);SIFT=tolerated(0.27);HGNC=ZNF598	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG,InDelNear	0.233	0.000	.	671	0.5	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=40;GAnc=T;GRP=0.233;HRun=0;MQ=36.78;MQ0=0;Map20=0.5;OAnc=T;TS=HPGOC;TSseq=C,T,T,T,T;bSC=671;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:26:75.25:0,75,997:0,0:10,16:0,0:0,0:0:36.78:0;1/1:14:42.14:560,42,0:0,0:0,0:0,0:5,9:0:37.00:0	-
16_2510677_G/A	16	2510677	A	ENSG00000162062	ENST00000361837	Transcript	NON_SYNONYMOUS_CODING	244	179	60	E/G	gAa/gGa	-	ENSP=ENSP00000355022;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C16orf59	G	A/A,G/G	A	A	A	A/A,H/H	.	1	.	3.08	0.004	0.225	730	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=61;Dels=0.00;FS=0.000;GAnc=A;GRP=3.08;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=36.80;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=730;mSC=0.004;pSC=0.225	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1395,105,0:21,16:0,0:0,0:0,0:0:37.00:0;0/0:24:72.23:0,72,941:0,0:0,0:10,14:0,0:0:37.00:0	+
16_3613928_A/G	16	3613928	G	ENSG00000167984	ENST00000301749	Transcript	NON_SYNONYMOUS_CODING	1416	1010	337	T/M	aCg/aTg	-	ENSP=ENSP00000301749;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NLRC3	A	G/G,G/G	G	G	G	A/A,A/A	rs45483498	0.92	CpG	-8.16	0.000	0.187	588	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.16;AMR_AF=0.07;AN=4;ASN_AF=0.05;CAnc=G;CpG;DP=58;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=G;GRP=-8.16;HRun=0;HaplotypeScore=0.9958;MQ=37.29;MQ0=0;Map20=1;OAnc=G;QD=37.75;TS=HPGOMC;TSseq=A,G,G,G,A,G;bSC=588;mSC=0.000;pSC=0.187	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1354,105,0:0,0:0,0:20,15:0,0:0:37.29:0;1/1:23:69.23:920,69,0:0,0:0,0:9,14:0,0:0:37.00:0	-
16_3645607_A/G	16	3645607	G	ENSG00000188827	ENST00000294008	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2653	2012	671	S/L	tCg/tTg	-	ENSP=ENSP00000294008;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=SLX4	A	G/G,G/G	G	G	G	A/A,A/A	rs77985244	0.94	CpG	0.88	0.341	0.047	592	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.09;AMR_AF=0.07;AN=4;ASN_AF=0.04;CAnc=G;CpG;DP=54;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=G;GRP=0.88;HRun=0;HaplotypeScore=0.0000;MQ=37.97;MQ0=0;Map20=1;OAnc=G;QD=38.30;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=592;mSC=0.341;pSC=0.047	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1412,108,0:0,0:0,0:17,18:0,0:0:37.97:0;1/1:18:54.18:720,54,0:0,0:0,0:9,9:0,0:0:37.00:0	-
16_3647692_A/C	16	3647692	C	ENSG00000188827	ENST00000294008	Transcript	NON_SYNONYMOUS_CODING	2012	1371	457	K/N	aaG/aaT	-	ENSP=ENSP00000294008;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLX4	A	C/C,C/C	C	C	C	A/A,A/A	rs74319927	0.94	.	5.19	1.000	0.526	592	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.05;AMR_AF=0.07;AN=4;ASN_AF=0.04;CAnc=C;DP=80;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=C;GRP=5.19;HRun=0;HaplotypeScore=1.1567;MQ=37.56;MQ0=0;Map20=1;OAnc=C;QD=38.74;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=592;mSC=1.000;pSC=0.526	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2086,160,0:0,0:29,24:0,0:0,0:0:37.56:0;1/1:27:81.26:1068,81,0:0,0:17,10:0,0:0,0:0:37.00:0	-
16_4513605_C/T	16	4513605	T	ENSG00000153406	ENST00000576176	Transcript	NON_SYNONYMOUS_CODING	636	638	213	H/R	cAt/cGt	-	ENSP=ENSP00000460476;PolyPhen=unknown(0);HGNC=NMRAL1	C	T/T,C/C	T	T	T	A/A,H/H	.	1	CpG	-6.89	0.000	0.003	506	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=43;Dels=0.00;FS=0.000;GAnc=T;GRP=-6.89;HRun=0;HaplotypeScore=0.0000;MQ=37.96;MQ0=0;Map20=1;OAnc=T;QD=37.27;TS=HPGOMC;TSseq=C,T,T,T,T,C;bSC=506;mSC=0.000;pSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:90.29:1188,90,0:0,0:0,0:0,0:15,16:0:37.96:0;0/0:12:36.12:0,36,476:0,0:7,5:0,0:0,0:0:37.00:0	-
16_4812705_A/G	16	4812705	G	ENSG00000103199	ENST00000219478	Transcript	NON_SYNONYMOUS_CODING	714	467	156	S/F	tCc/tTc	-	ENSP=ENSP00000219478;PolyPhen=benign(0);SIFT=tolerated(0.48);HGNC=ZNF500	A	G/G,G/G	G	G	G	A/A,A/A	rs61733564	0.95	.	-1.84	0.000	0.040	676	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.15;AMR_AF=0.03;AN=4;CAnc=G;DP=52;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=-1.84;HRun;HaplotypeScore=0.0000;MQ=39.02;MQ0=0;Map20=1;OAnc=G;QD=37.31;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=676;mSC=0.000;pSC=0.040	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.27:1115,87,0:0,0:0,0:13,15:0,0:0:39.02:0;1/1:23:69.22:901,69,0:0,0:0,0:8,15:0,0:0:37.00:0	-
16_5097882_G/A	16	5097882	A	ENSG00000153446	ENST00000315997	Transcript	NON_SYNONYMOUS_CODING	1250	1048	350	S/P	Tca/Cca	-	ENSP=ENSP00000324672;PolyPhen=benign(0);SIFT=tolerated(0.73);HGNC=C16orf89	G	A/G,G/G	A	A	A	A/H,H/H	rs148712817	1.0	.	-6.96	0.533	0.708	884	1	1000gALT=A;AC=1;AF=0.25;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=1.376;CAnc=A;DP=85;Dels=0.00;FS=2.729;GAnc=A;GRP=-6.96;HRun=3;HaplotypeScore=0.0000;MQ=38.32;MQ0=0;MQRankSum=0.216;Map20=1;OAnc=A;QD=14.94;ReadPosRankSum=1.081;TS=HPGOMC;TSseq=G,A,-,A,A,T;bSC=884;mSC=0.533;pSC=0.708	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:45:99:702,0,818:6,15:0,0:10,14:0,0:0:38.32:0;0/0:40:99:0,117,1542:0,0:1,0:20,19:0,0:0:37.00:0	-
16_8738499_G/A	16	8738499	A	ENSG00000067365	ENST00000381920	Transcript	NON_SYNONYMOUS_CODING	1354	1096	366	A/T	Gca/Aca	-	ENSP=ENSP00000371345;PolyPhen=benign(0.002);SIFT=tolerated(0.56);HGNC=METTL22	A	A/A,G/G	G	G	G	H/H,A/A	rs1731000	0.99	CpG	-4.67	0.000	0.036	940	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.99;AFR_AF=0.97;AMR_AF=0.99;AN=4;ASN_AF=1.00;CAnc=G;CpG;DP=53;Dels=0.00;EUR_AF=1.00;FS=0.000;GAnc=G;GRP=-4.67;HRun=0;HaplotypeScore=0.0000;MQ=38.49;MQ0=0;Map20=1;OAnc=G;QD=36.58;TS=HPGOMC;TSseq=G,G,G,G,G,A;bSC=940;mSC=0.000;pSC=0.036	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:96.29:1240,96,0:16,17:0,0:0,0:0,0:0:38.49:0;0/0:20:60.19:0,60,779:0,0:0,0:14,6:0,0:0:37.00:0	+
16_8739822_C/T	16	8739822	T	ENSG00000067365	ENST00000562151	Transcript	NON_SYNONYMOUS_CODING	458	460	154	P/S	Ccg/Tcg	-	ENSP=ENSP00000461054;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=METTL22	T	C/C,C/C	C	C	C	A/A,A/A	rs36160442	0.91	.	-0.717	0.000	0.014	946	1	1000gALT=T;AC=0;AF=0.00;AF1000g=0.91;AFR_AF=0.86;AMR_AF=0.87;AN=4;ASN_AF=1.00;CAnc=C;DP=56;EUR_AF=0.89;GAnc=C;GRP=-0.717;MQ=36.72;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=946;mSC=0.000;pSC=0.014	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:36:99:0,108,1430:0,0:21,15:0,0:0,0:0:36.72:0;0/0:20:60.19:0,60,788:0,0:8,12:0,0:0,0:0:37.00:0	+
16_11477603_A/T	16	11477603	T	ENSG00000262356	ENST00000571008	Transcript	NON_SYNONYMOUS_CODING	1257	1259	420	D/V	gAc/gTc	-	ENSP=ENSP00000460491;PolyPhen=benign(0);SIFT=tolerated(0.31)	A	A/A,T/T	T	T	-	H/H,A/A	.	1	.	4.3	0.676	0.372	958	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=46;GAnc=T;GRP=4.3;HRun=0;MQ=37.99;MQ0=0;Map20=1;TS=HPGM;TSseq=A,T,T,T;UR;bSC=958;mSC=0.676;pSC=0.372	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:30:90.29:0,90,1181:15,15:0,0:0,0:0,0:0:37.99:0;1/1:16:48.15:611,48,0:0,0:0,0:0,0:12,4:0:37.00:0	-
16_11477777_C/T	16	11477777	T	ENSG00000262356	ENST00000571008	Transcript	NON_SYNONYMOUS_CODING	1185	1187	396	D/G	gAc/gGc	-	ENSP=ENSP00000460491;PolyPhen=benign(0.001);SIFT=tolerated(0.26)	C	T/T,T/T	T	T	-	A/A,A/A	.	1	.	2.74	0.227	0.050	958	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.003;CAnc=T;DP=59;Dels=0.00;FS=0.000;GAnc=T;GRP=2.74;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.459;Map20=1;QD=34.54;ReadPosRankSum=-1.733;TS=HPGM;TSseq=C,T,T,T;UR;bSC=958;mSC=0.227;pSC=0.050	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:74.36:1415,74,0:0,0:1,0:0,0:23,16:0:37.00:0;1/1:19:57.18:749,57,0:0,0:0,0:0,0:10,9:0:37.00:0	-
16_11477793_A/G	16	11477793	G	ENSG00000262356	ENST00000571008	Transcript	NON_SYNONYMOUS_CODING	1169	1171	391	R/W	Cgg/Tgg	-	ENSP=ENSP00000460491;PolyPhen=benign(0);SIFT=tolerated(0.51)	A	G/G,G/G	G	G	-	A/A,A/A	.	1	CpG	-1.16	0.371	0.024	958	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.473;CAnc=G;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.16;HRun;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;MQRankSum=-0.053;Map20=1;QD=36.41;ReadPosRankSum=-1.628;TS=HPGM;TSseq=A,G,G,G;UR;bSC=958;mSC=0.371;pSC=0.024	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:59.32:1235,59,0:1,0:0,0:18,14:0,0:0:37.00:0;1/1:21:63.20:829,63,0:0,0:0,0:11,10:0,0:0:37.00:0	-
16_16276292_T/C	16	16276292	C	ENSG00000091262	ENST00000205557	Transcript	NON_SYNONYMOUS_CODING	2254	2224	742	V/I	Gtc/Atc	-	ENSP=ENSP00000205557;PolyPhen=benign(0.001);SIFT=tolerated(0.21);HGNC=ABCC6	T	C/C,C/C	C	C	C	A/A,A/A	rs59593133	0.98	.	-0.32	.	0.043	889	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.01;AN=4;CAnc=C;DP=63;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-0.32;HRun=0;HaplotypeScore=0.0000;MQ=38.60;MQ0=0;Map20=1;OAnc=C;QD=36.08;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=889;pSC=0.043	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1368,105,0:0,0:20,17:0,0:0,0:0:38.60:0;1/1:26:78.25:1030,78,0:0,0:13,13:0,0:0,0:0:37.00:0	-
16_19729767_A/G	16	19729767	G	ENSG00000174628	ENST00000320394	Transcript	NON_SYNONYMOUS_CODING	838	139	47	A/T	Gcc/Acc	-	ENSP=ENSP00000324901;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=IQCK	A	A/A,G/G	G	G	G	H/H,A/A	.	1	CpG	-0.01	0.016	0.364	676	1	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=56;GAnc=G;GRP=-0.01;HRun=0;MQ=37.85;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=676;mSC=0.016;pSC=0.364	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:35:93.30:0,93,1227:17,18:0,0:0,0:0,0:0:37.85:0;1/1:21:63.20:824,63,0:0,0:0,0:6,15:0,0:0:37.00:0	+
16_21185354_T/C	16	21185354	C	ENSG00000011638	ENST00000233047	Transcript	NON_SYNONYMOUS_CODING	757	289	97	L/F	Ctc/Ttc	-	ENSP=ENSP00000233047;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TMEM159	T	T/T,C/C	C	C	C	H/H,A/A	rs35345508	0.98	.	2.92	0.510	0.109	543	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=C;DP=78;GAnc=C;GRP=2.92;HRun;MQ=37.62;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=543;mSC=0.510;pSC=0.109	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,135,1770:0,0:0,0:0,0:23,24:0:37.62:0;1/1:30:90.29:1180,90,0:0,0:18,12:0,0:0,0:0:37.00:0	+
16_27268779_G/C	16	27268779	C	ENSG00000169189	ENST00000361439	Transcript	NON_SYNONYMOUS_CODING	213	113	38	R/T	aGg/aCg	-	ENSP=ENSP00000355077;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NSMCE1	G	C/C,C/C	C	C	C	A/A,A/A	rs7195194	0.92	CpG	0.995	0.999	0.584	883	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.31;AMR_AF=0.04;AN=4;CAnc=C;CpG;DP=55;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=0.995;HRun;HaplotypeScore=0.0000;MQ=37.88;MQ0=0;Map20=1;OAnc=C;QD=38.85;TS=HPGOMC;TSseq=G,C,C,C,C,T;UR;bSC=883;mSC=0.999;pSC=0.584	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1354,102,0:0,0:16,17:0,0:0,0:0:37.88:0;1/1:21:63.20:817,63,0:0,0:7,14:0,0:0,0:0:37.00:0	-
16_28508666_T/G	16	28508666	G	ENSG00000184730	ENST00000328423	Transcript	NON_SYNONYMOUS_CODING	2287	2277	759	E/D	gaG/gaT	-	ENSP=ENSP00000327669;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=APOBR	T	G/G,G/G	G	G	G	A/A,A/A	.	1	.	-0.308	.	.	686	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=62;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.308;HRun;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.40;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=686	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1838,141,0:0,0:0,0:23,24:0,0:0:37.00:0;1/1:15:42.14:560,42,0:1,0:0,0:7,7:0,0:0:37.00:0	+
16_30666480_A/G	16	30666480	G	ENSG00000156858	ENST00000300835	Transcript	NON_SYNONYMOUS_CODING	1500	1189	397	A/T	Gcc/Acc	-	ENSP=ENSP00000300835;PolyPhen=benign(0);SIFT=tolerated(0.57);HGNC=PRR14	A	G/G,G/G	G	G	G	A/A,A/A	rs73536441	0.98	CpG	-3.29	0.318	0.985	26	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;BaseQRankSum=0.650;CAnc=G;CpG;DP=77;Dels=0.00;FS=0.000;GAnc=G;GRP=-3.29;HRun=0;HaplotypeScore=1.9995;MQ=37.62;MQ0=0;MQRankSum=1.299;Map20=1;OAnc=G;QD=37.21;ReadPosRankSum=0.794;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=26;mSC=0.318;pSC=0.985	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1819,104,0:0,1:0,0:21,26:0,0:0:37.62:0;1/1:29:84.28:1115,84,0:0,0:0,0:12,17:0,0:0:37.00:0	+
16_48121912_A/G	16	48121912	G	ENSG00000140798	ENST00000311303	Transcript	NON_SYNONYMOUS_CODING	3906	3560	1187	T/I	aCt/aTt	-	ENSP=ENSP00000311030;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ABCC12	A	G/G,G/G	G	G	G	A/A,A/A	rs34106426	0.96	.	4.9	0.800	0.422	485	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.02;AN=4;CAnc=G;DP=72;Dels=0.00;FS=0.000;GAnc=G;GRP=4.9;HRun=0;HaplotypeScore=0.0000;MQ=36.73;MQ0=0;Map20=1;OAnc=G;QD=36.96;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=485;mSC=0.800;pSC=0.422	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1401,108,0:0,0:0,0:15,22:0,0:0:36.73:0;1/1:35:99:1400,105,0:0,0:0,0:14,21:0,0:0:37.00:0	-
16_48134856_T/A	16	48134856	A	ENSG00000140798	ENST00000311303	Transcript	NON_SYNONYMOUS_CODING	3311	2965	989	S/T	Tcc/Acc	-	ENSP=ENSP00000311030;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ABCC12	T	A/A,A/A	A	A	A	A/A,A/A	rs6500305	0.93	.	5.39	0.961	0.378	517	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.30;AMR_AF=0.04;AN=4;CAnc=A;DP=63;Dels=0.00;FS=0.000;GAnc=A;GRP=5.39;HRun=0;HaplotypeScore=1.9601;MQ=37.43;MQ0=0;Map20=1;OAnc=A;QD=37.86;TS=HPGOMC;TSseq=T,A,A,A,A,A;UR;bSC=517;mSC=0.961;pSC=0.378	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1812,141,0:23,24:0,0:0,0:0,0:0:37.43:0;1/1:16:48.15:620,48,0:11,5:0,0:0,0:0,0:0:37.00:0	-
16_48149467_A/G	16	48149467	G	ENSG00000140798	ENST00000416054	Transcript	NON_SYNONYMOUS_CODING	1781	1775	592	P/L	cCg/cTg	-	ENSP=ENSP00000413046;PolyPhen=probably_damaging(0.918);SIFT=deleterious(0);HGNC=ABCC12	A	G/G,G/G	G	G	G	A/A,A/A	rs9302750	0.94	CpG	-6.61	0.016	0.011	518	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.23;AMR_AF=0.02;AN=4;BaseQRankSum=-1.034;CAnc=G;CpG;DP=61;Dels=0.00;FS=7.074;GAnc=G;GRP=-6.61;HRun;HaplotypeScore=6.0986;MQ=35.69;MQ0=0;MQRankSum=0.266;Map20=1;OAnc=G;QD=31.57;ReadPosRankSum=0.207;TS=HPGOMC;TSseq=A,G,G,G,G,A;UR;bSC=518;mSC=0.016;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:43.33:1359,43,0:0,2:0,0:24,16:0,0:0:35.69:0;1/1:19:57.16:706,57,0:0,0:0,0:10,9:0,0:0:35.16:0	-
16_50731225_C/T	16	50731225	T	ENSG00000167207	ENST00000300589	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	176	71	24	L/P	cTg/cCg	-	ENSP=ENSP00000300589;PolyPhen=benign(0.01);SIFT=tolerated(0.57);HGNC=NOD2	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	-1.44	0.000	0.232	633	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=65;GAnc=T;GRP=-1.44;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=633;mSC=0.000;pSC=0.232	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,141,1864:0,0:21,26:0,0:0,0:0:37.00:0;1/1:18:54.18:710,54,0:0,0:0,0:0,0:7,11:0:37.00:0	+
16_64982513_G/A	16	64982513	A	ENSG00000140937	ENST00000394156	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2526	2072	691	M/T	aTg/aCg	-	ENSP=ENSP00000377711;PolyPhen=unknown(0);HGNC=CDH11	G	G/G,A/A	A	A	A	H/H,A/A	.	1	CpG	-1.63	0.000	0.018	448	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=67;GAnc=A;GRP=-1.63;HRun=0;MQ=39.65;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,C;UR;bSC=448;mSC=0.000;pSC=0.018	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:44:99:0,132,1744:0,0:0,0:21,23:0,0:0:39.65:0;1/1:23:69.21:875,69,0:9,14:0,0:0,0:0,0:0:37.00:0	-
16_66947064_T/C	16	66947064	C	ENSG00000166589	ENST00000299752	Transcript	NON_SYNONYMOUS_CODING	1218	1024	342	A/T	Gca/Aca	-	ENSP=ENSP00000299752;PolyPhen=benign(0.001);SIFT=tolerated(0.63);HGNC=CDH16	T	C/C,C/C	C	C	C	A/A,A/A	.	1	CpG	-5.05	0.008	0.191	147	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=72;Dels=0.00;FS=0.000;GAnc=C;GRP=-5.05;HRun=0;HaplotypeScore=0.9967;MQ=37.65;MQ0=0;Map20=1;OAnc=C;QD=38.36;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=147;mSC=0.008;pSC=0.191	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1797,138,0:0,0:27,19:0,0:0,0:0:37.65:0;1/1:26:38.25:960,38,0:0,0:14,11:0,0:1,0:0:37.00:0	-
16_66997491_G/A	16	66997491	A	ENSG00000172828	ENST00000303334	Transcript	NON_SYNONYMOUS_CODING	456	385	129	I/V	Atc/Gtc	-	ENSP=ENSP00000304782;PolyPhen=benign(0.01);SIFT=tolerated(1);HGNC=CES3	G	A/A,A/A	A	A	A	A/A,A/A	rs61745806	0.98	CpG	1.54	.	0.324	162	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.04;AMR_AF=0.02;AN=4;BaseQRankSum=1.496;CAnc=A;CpG;DP=72;Dels=0.01;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=1.54;HRun=0;HaplotypeScore=5.8641;MQ=36.78;MQ0=0;MQRankSum=1.654;Map20=1;OAnc=A;QD=35.33;ReadPosRankSum=-0.787;TS=HPGOMC;TSseq=G,A,A,A,A,-;bSC=162;pSC=0.324	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:92.41:1658,92,0:26,16:0,0:1,0:0,0:0:36.78:0;1/1:26:78.25:1013,78,0:14,12:0,0:0,0:0,0:0:37.00:0	+
16_70542721_C/T	16	70542721	T	ENSG00000103051	ENST00000393612	Transcript	NON_SYNONYMOUS_CODING	1000	997	333	I/V	Att/Gtt	-	ENSP=ENSP00000377236;PolyPhen=benign(0.005);SIFT=tolerated(0.96);HGNC=COG4	C	T/T,T/T	T	T	T	A/A,A/A	rs8053883	0.93	.	0.378	0.000	0.558	102	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.27;AMR_AF=0.04;AN=4;CAnc=T;DP=109;Dels=0.00;FS=0.000;GAnc=T;GRP=0.378;HRun=0;HaplotypeScore=0.0000;MQ=39.01;MQ0=0;Map20=1;OAnc=T;QD=39.06;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=102;mSC=0.000;pSC=0.558	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:73:99:2884,217,0:0,0:0,0:0,0:49,24:0:39.01:0;1/1:36:99:1391,105,0:0,1:0,0:0,0:24,11:0:37.00:0	-
16_74773995_G/C	16	74773995	C	ENSG00000103089	ENST00000219368	Transcript	NON_SYNONYMOUS_CODING	359	289	97	A/P	Gct/Cct	-	ENSP=ENSP00000219368;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FA2H	G	C/C,C/C	C	C	C	A/A,A/A	rs35874850	0.98	.	.	.	.	866	.	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.01;AN=4;CAnc=C;DP=69;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;HRun;HaplotypeScore=0.9992;MQ=37.66;MQ0=0;OAnc=C;QD=38.35;TS=HPGOMC;TSseq=G,-,C,C,C,C;bSC=866	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1759,135,0:0,0:26,19:0,0:0,0:0:37.66:0;1/1:24:72.23:941,72,0:0,0:12,12:0,0:0,0:0:37.00:0	-
16_79245573_C/T	16	79245573	T	ENSG00000186153	ENST00000299644	Transcript	NON_SYNONYMOUS_CODING	649	649	217	F/L	Ttt/Ctt	-	ENSP=ENSP00000299644;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=WWOX	C	T/T,C/C	T	T	T	A/A,H/H	.	1	.	-8.54	0.198	0.908	967	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=51;Dels=0.00;FS=0.000;GAnc=T;GRP=-8.54;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.39;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=967;mSC=0.198;pSC=0.908	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.31:1261,96,0:0,0:0,0:0,0:19,13:0:37.00:0;0/0:19:57.19:0,57,753:0,0:9,10:0,0:0,0:0:37.00:0	+
16_81198287_T/C	16	81198287	C	ENSG00000166473	ENST00000525539	Transcript	NON_SYNONYMOUS_CODING	3307	3307	1103	G/S	Ggc/Agc	-	ENSP=ENSP00000434417;PolyPhen=benign(0.002);SIFT=tolerated(0.67);HGNC=PKD1L2	T	C/C,T/T	C	C	C	A/A,H/H	rs75273856	0.99	CpG	1.06	0.001	0.107	952	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.06;AN=4;BaseQRankSum=0.000;CAnc=C;CpG;DP=51;Dels=0.00;FS=0.000;GAnc=C;GRP=1.06;HRun;HaplotypeScore=1.5741;MQ=36.72;MQ0=0;MQRankSum=0.193;Map20=1;OAnc=C;QD=35.53;ReadPosRankSum=0.385;TS=HPGOMC;TSseq=T,C,C,-,C,C;bSC=952;mSC=0.001;pSC=0.107	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:68.33:1312,68,0:0,0:18,17:0,0:0,1:0:36.72:0;0/0:15:45.15:0,45,593:0,0:0,0:0,0:5,10:0:37.00:0	-
16_81198338_G/T	16	81198338	T	ENSG00000166473	ENST00000525539	Transcript	NON_SYNONYMOUS_CODING	3256	3256	1086	T/P	Act/Cct	-	ENSP=ENSP00000434417;PolyPhen=benign(0);SIFT=tolerated(0.47);HGNC=PKD1L2	G	T/T,G/G	T	T	T	A/A,H/H	rs77066396	0.99	.	-4.3	0.000	0.073	952	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.06;AN=4;BaseQRankSum=0.766;CAnc=T;DP=74;Dels=0.00;FS=0.000;GAnc=T;GRP=-4.3;HRun=0;HaplotypeScore=0.0000;MQ=36.57;MQ0=0;MQRankSum=-1.410;Map20=1;OAnc=T;QD=33.17;ReadPosRankSum=-0.363;TS=HPGOMC;TSseq=G,T,T,-,T,T;bSC=952;mSC=0.000;pSC=0.073	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:89.40:1592,89,0:0,0:0,0:0,1:23,23:0:36.57:0;0/0:27:81.26:0,81,1058:0,0:0,0:18,9:0,0:0:37.00:0	-
16_81249892_T/C	16	81249892	C	ENSG00000166473	ENST00000337114	Transcript	NON_SYNONYMOUS_CODING	421	421	141	A/T	Gcc/Acc	-	ENSP=ENSP00000337397;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PKD1L2	T	C/C,T/T	C	C	C	A/A,H/H	rs73593138	0.95	.	-0.545	0.000	0.783	940	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.05;AFR_AF=0.22;AMR_AF=0.01;AN=4;CAnc=C;DP=57;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.545;HRun;HaplotypeScore=0.0000;MQ=39.57;MQ0=0;Map20=1;OAnc=C;QD=36.98;TS=HPGOMC;TSseq=T,C,C,C,-,C;bSC=940;mSC=0.000;pSC=0.783	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1290,99,0:0,0:17,16:0,0:0,0:0:39.57:0;0/0:23:69.22:0,69,912:0,0:0,0:0,0:12,11:0:37.00:0	-
16_84193318_G/C	16	84193318	C	ENSG00000154099	ENST00000334315	Transcript	NON_SYNONYMOUS_CODING	961	780	260	H/Q	caC/caG	-	ENSP=ENSP00000334593;PolyPhen=benign(0);SIFT=tolerated(0.62);HGNC=DNAAF1	G	G/G,C/C	C	-	C	H/H,A/A	rs112051327	0.99	.	-2.9	0.001	0.373	749	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AN=4;CAnc=C;DP=94;GRP=-2.9;HRun=0;MQ=39.13;MQ0=0;Map20=1;OAnc=C;TS=HPOMC;TSseq=G,C,C,C,C;UR;bSC=749;mSC=0.001;pSC=0.373	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:55:99:0,163,2111:0,0:0,0:25,30:0,0:0:39.13:0;1/1:39:99:1525,117,0:0,0:18,21:0,0:0,0:0:37.00:0	+
16_84531664_C/T	16	84531664	T	ENSG00000140950	ENST00000343629	Transcript	NON_SYNONYMOUS_CODING	212	29	10	Q/R	cAg/cGg	-	ENSP=ENSP00000343635;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KIAA1609	C	T/T,T/C	T	T	T	A/A,A/H	.	0.99	CpG	-0.909	0.043	0.290	958	1	1000gALT=A;AC=3;AF=0.75;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=T;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.909;HRun=0;HaplotypeScore=0.0000;MQ=36.72;MQ0=0;Map20=1;OAnc=T;QD=37.23;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=958;mSC=0.043;pSC=0.290	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1373,105,0:0,0:0,0:0,0:22,14:0:36.72:0;0/1:27:99:587,0,313:0,0:3,7:0,0:10,7:0:37.00:0	-
16_87874736_G/C	16	87874736	C	ENSG00000103257	ENST00000261622	Transcript	NON_SYNONYMOUS_CODING	756	690	230	K/N	aaG/aaC	-	ENSP=ENSP00000261622;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=SLC7A5	G	G/G,C/C	C	C	C	H/H,A/A	rs1060250	0.99	.	3.04	0.204	0.967	940	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=C;DP=75;GAnc=C;GRP=3.04;HRun=0;MQ=38.41;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=940;mSC=0.204;pSC=0.967	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,126,1659:0,0:0,0:21,20:0,0:0:38.41:0;1/1:33:99:1305,99,0:0,0:17,16:0,0:0,0:0:37.00:0	-
16_88804443_C/T	16	88804443	T	ENSG00000103335	ENST00000301015	Transcript	NON_SYNONYMOUS_CODING	1166	919	307	S/G	Agc/Ggc	-	ENSP=ENSP00000301015;PolyPhen=benign(0);SIFT=tolerated(0.9);HGNC=PIEZO1	C	T/T,T/T	T	T	T	A/A,A/A	.	1	CpG	-2.05	0.002	0.168	788	1	AC=4;AF=1.00;AN=4;CAnc=T;CpG;DP=57;Dels=0.00;FS=0.000;GAnc=T;GRP=-2.05;HRun=0;HaplotypeScore=0.6651;MQ=38.15;MQ0=0;Map20=1;OAnc=T;QD=35.51;TS=HPGOC;TSseq=C,T,T,T,T;bSC=788;mSC=0.002;pSC=0.168	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1560,117,0:0,0:0,0:0,0:24,19:0:38.15:0;1/1:14:39.11:495,39,0:0,0:0,0:0,0:7,7:0:37.00:0	-
16_88947155_C/T	16	88947155	T	ENSG00000129993	ENST00000268679	Transcript	NON_SYNONYMOUS_CODING	1841	1444	482	M/V	Atg/Gtg	-	ENSP=ENSP00000268679;PolyPhen=benign(0.009);SIFT=tolerated(0.56);HGNC=CBFA2T3	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	1.07	0.057	0.605	829	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=47;GAnc=T;GRP=1.07;HRun=0;MQ=38.78;MQ0=0;Map20=1;OAnc=T;TS=HPGOM;TSseq=C,T,N,-,T;bSC=829;mSC=0.057;pSC=0.605	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:99:0,99,1306:0,0:16,16:0,0:0,0:0:38.78:0;1/1:14:42.14:555,42,0:0,0:0,0:0,0:10,4:0:37.00:0	-
17_2265494_G/A	17	2265494	A	ENSG00000141258	ENST00000268989	Transcript	NON_SYNONYMOUS_CODING	565	388	130	I/V	Ata/Gta	-	ENSP=ENSP00000268989;PolyPhen=benign(0.001);SIFT=tolerated(0.58);HGNC=SGSM2	G	A/A,G/G	A	A	A	A/A,H/H	.	1	CpG	3.59	0.434	0.268	558	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=51;Dels=0.00;FS=0.000;GAnc=A;GRP=3.59;HRun=0;HaplotypeScore=1.9891;MQ=37.90;MQ0=0;Map20=1;OAnc=A;QD=37.20;TS=HPGOMC;TSseq=G,A,A,A,A,N;bSC=558;mSC=0.434;pSC=0.268	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:96.31:1261,96,0:18,13:0,0:0,0:0,0:0:37.90:0;0/0:18:54.16:0,54,699:0,0:0,0:6,12:0,0:0:37.00:0	+
17_3119684_C/T	17	3119684	T	ENSG00000172146	ENST00000304094	Transcript	NON_SYNONYMOUS_CODING	770	770	257	M/T	aTg/aCg	-	ENSP=ENSP00000305207;PolyPhen=benign(0.001);SIFT=tolerated(0.21);HGNC=OR1A1	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	2.82	0.408	0.495	716	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=81;GAnc=T;GRP=2.82;HRun=0;MQ=37.55;MQ0=0;Map20=1;OAnc=T;TS=HPGO;TSseq=C,T,T,T;bSC=716;mSC=0.408;pSC=0.495	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:54:99:0,160,2099:0,0:30,23:0,0:1,0:0:37.55:0;1/1:27:81.26:1062,81,0:0,0:0,0:0,0:13,14:0:37.00:0	+
17_5463194_A/C	17	5463194	C	ENSG00000091592	ENST00000262467	Transcript	NON_SYNONYMOUS_CODING	1396	822	274	L/F	ttG/ttT	-	ENSP=ENSP00000262467;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NLRP1	A	C/C,A/A	C	C	C	A/A,H/H	rs148499417	1.0	.	-2.48	0.000	0.675	619	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;DP=89;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.48;HRun=0;HaplotypeScore=1.9829;MQ=38.08;MQ0=0;Map20=1;OAnc=C;QD=38.49;TS=HPGOMC;TSseq=A,C,C,C,N,C;UR;bSC=619;mSC=0.000;pSC=0.675	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2150,166,0:0,0:16,38:0,0:0,0:0:38.08:0;0/0:34:99:0,102,1359:12,22:0,0:0,0:0,0:0:37.00:0	-
17_5463280_T/C	17	5463280	C	ENSG00000091592	ENST00000262467	Transcript	NON_SYNONYMOUS_CODING	1310	736	246	A/T	Gcc/Acc	-	ENSP=ENSP00000262467;PolyPhen=benign(0);SIFT=tolerated(0.6);HGNC=NLRP1	T	C/C,T/T	C	C	C	A/A,H/H	.	1.0	CpG	-0.976	0.000	0.100	619	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;CpG;DP=42;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.976;HRun=0;HaplotypeScore=0.0000;MQ=38.90;MQ0=0;Map20=1;OAnc=C;QD=35.89;TS=HPGOMC;TSseq=T,C,C,T,-,-;UR;bSC=619;mSC=0.000;pSC=0.100	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:90.28:1146,90,0:0,0:17,13:0,0:1,0:0:38.90:0;0/0:11:33.10:0,33,430:0,0:0,0:0,0:8,3:0:37.00:0	-
17_8701315_G/A	17	8701315	A	ENSG00000185156	ENST00000329805	Transcript	NON_SYNONYMOUS_CODING	1353	1124	375	I/T	aTt/aCt	-	ENSP=ENSP00000330051;PolyPhen=benign(0.001);SIFT=tolerated(0.09);HGNC=MFSD6L	G	A/A,G/G	A	A	-	A/A,H/H	rs111767864	1.0	.	4.05	0.005	0.045	804	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=A;DP=65;Dels=0.00;FS=0.000;GAnc=A;GRP=4.05;HRun;HaplotypeScore=0.0000;MQ=38.35;MQ0=0;Map20=1;QD=36.03;TS=HPGMC;TSseq=G,A,A,A,A;UR;bSC=804;mSC=0.005;pSC=0.045	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1618,123,0:20,24:0,0:0,0:0,0:0:38.35:0;0/0:21:63.21:0,63,840:0,0:0,0:7,14:0,0:0:37.00:0	-
17_26919034_G/C	17	26919034	C	ENSG00000076382	ENST00000321765	Transcript	NON_SYNONYMOUS_CODING	1561	1228	410	D/H	Gac/Cac	-	ENSP=ENSP00000323300;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPAG5	G	C/C,C/C	C	C	C	A/A,A/A	.	1	.	5.4	.	0.941	17	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=66;Dels=0.00;FS=0.000;GAnc=C;GRP=5.4;HRun;HaplotypeScore=0.9997;MQ=39.31;MQ0=0;Map20=1;OAnc=C;QD=37.88;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=17;pSC=0.941	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1472,111,0:0,0:19,19:0,0:0,0:0:39.31:0;1/1:28:84.26:1071,84,0:0,0:16,12:0,0:0,0:0:37.00:0	-
17_26919777_C/T	17	26919777	T	ENSG00000076382	ENST00000321765	Transcript	NON_SYNONYMOUS_CODING	818	485	162	E/G	gAa/gGa	-	ENSP=ENSP00000323300;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPAG5	C	T/T,T/T	T	T	T	A/A,A/A	.	1	.	3.66	.	0.573	17	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=70;Dels=0.00;FS=0.000;GAnc=T;GRP=3.66;HRun;HaplotypeScore=0.9997;MQ=40.28;MQ0=0;Map20=1;OAnc=T;QD=36.52;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=17;pSC=0.573	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1640,126,0:0,0:0,0:0,0:21,22:0:40.28:0;1/1:26:78.26:1040,78,0:0,0:0,0:0,0:15,11:0:37.00:0	-
17_26925578_A/G	17	26925578	G	ENSG00000076382	ENST00000321765	Transcript	NON_SYNONYMOUS_CODING	460	127	43	P/S	Ccc/Tcc	-	ENSP=ENSP00000323300;PolyPhen=benign(0);SIFT=tolerated(0.6);HGNC=SPAG5	A	G/G,G/G	G	G	G	A/A,A/A	.	1	.	-3.57	.	0.113	17	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=62;Dels=0.00;FS=0.000;GAnc=G;GRP=-3.57;HRun=5;HaplotypeScore=0.0000;MQ=38.26;MQ0=0;Map20=1;OAnc=G;QD=38.45;TS=HPGOMC;TSseq=A,G,G,G,G,T;UR;bSC=17;pSC=0.113	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1840,141,0:0,0:0,0:29,18:0,0:0:38.26:0;1/1:15:45.15:600,45,0:0,0:0,0:9,6:0,0:0:37.00:0	-
17_27959258_C/T	17	27959258	T	ENSG00000141298	ENST00000269033	Transcript	NON_SYNONYMOUS_CODING	3025	2873	958	K/R	aAg/aGg	-	ENSP=ENSP00000269033;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SSH2	C	T/T,T/T	T	T	T	A/A,A/A	.	1	.	1.67	0.000	0.715	83	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=61;Dels=0.00;FS=0.000;GAnc=T;GRP=1.67;HRun;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;Map20=1;OAnc=T;QD=36.78;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=83;mSC=0.000;pSC=0.715	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1357,102,0:0,0:0,0:0,0:19,17:0:37.83:0;1/1:25:75.24:986,75,0:0,0:0,0:0,0:11,14:0:37.00:0	-
17_34856697_A/G	17	34856697	G	ENSG00000141140	ENST00000268852	Transcript	NON_SYNONYMOUS_CODING	2763	1750	584	R/W	Cgg/Tgg	-	ENSP=ENSP00000268852;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MYO19	A	G/G,A/A	G	G	G	A/A,H/H	.	1.0	CpG	2.82	0.944	0.084	386	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-0.456;CAnc=G;CpG;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=2.82;HRun=0;HaplotypeScore=5.9984;MQ=37.77;MQ0=0;MQRankSum=-1.641;Map20=1;OAnc=G;QD=35.31;ReadPosRankSum=1.277;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=386;mSC=0.944;pSC=0.084	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:74.36:1410,74,0:0,1:0,0:14,22:0,0:0:37.77:0;0/0:13:39.12:0,39,507:3,10:0,0:0,0:0,0:0:37.00:0	-
17_34858985_A/G	17	34858985	G	ENSG00000141140	ENST00000268852	Transcript	NON_SYNONYMOUS_CODING	2445	1432	478	R/C	Cgc/Tgc	-	ENSP=ENSP00000268852;PolyPhen=benign(0);SIFT=tolerated(0.9);HGNC=MYO19	A	G/G,A/A	G	G	G	A/A,H/H	rs61743158	1.0	CpG	4.27	0.171	0.505	382	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;CpG;DP=77;Dels=0.00;FS=0.000;GAnc=G;GRP=4.27;HRun=0;HaplotypeScore=2.9875;MQ=37.59;MQ0=0;Map20=1;OAnc=G;QD=38.24;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=382;mSC=0.171;pSC=0.505	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1983,150,0:0,0:1,0:27,23:0,0:0:37.59:0;0/0:26:78.25:0,78,1034:11,15:0,0:0,0:0,0:0:37.00:0	-
17_34869217_C/A	17	34869217	A	ENSG00000141140	ENST00000544606	Transcript	NON_SYNONYMOUS_CODING	978	547	183	S/A	Tca/Gca	-	ENSP=ENSP00000438365;PolyPhen=benign(0);HGNC=MYO19	C	A/A,C/C	A	A	A	A/A,H/H	.	1	.	-6.13	.	0.060	370	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=72;Dels=0.00;FS=0.000;GAnc=A;GRP=-6.13;HRun=3;HaplotypeScore=0.0000;MQ=37.77;MQ0=0;Map20=1;OAnc=A;QD=37.77;TS=HPGOMC;TSseq=C,A,-,A,A,A;bSC=370;pSC=0.060	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1506,117,0:23,16:0,0:0,0:0,0:0:37.77:0;0/0:33:99:0,99,1295:0,0:22,11:0,0:0,0:0:37.00:0	-
17_34871788_T/C	17	34871788	C	ENSG00000141140	ENST00000268852	Transcript	NON_SYNONYMOUS_CODING	1473	460	154	A/T	Gcc/Acc	-	ENSP=ENSP00000268852;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MYO19	T	C/C,T/T	C	C	C	A/A,H/H	.	1	CpG	-2.38	.	0.924	366	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=59;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.38;HRun=0;HaplotypeScore=2.9902;MQ=39.17;MQ0=0;Map20=1;OAnc=C;QD=36.95;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=366;pSC=0.924	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1363,108,0:0,0:14,21:0,0:0,0:0:39.17:0;0/0:23:69.23:0,69,918:0,0:0,0:0,0:13,10:0:37.00:0	-
17_35913918_A/G	17	35913918	G	ENSG00000006114	ENST00000339208	Transcript	NON_SYNONYMOUS_CODING	1507	1424	475	A/V	gCg/gTg	-	ENSP=ENSP00000343610;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SYNRG	A	G/G,G/G	G	G	G	A/A,A/A	rs150268786	1.0	CpG	6.08	0.966	0.442	290	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=96;Dels=0.00;FS=0.000;GAnc=G;GRP=6.08;HRun=0;HaplotypeScore=0.9789;MQ=40.17;MQ0=0;Map20=1;OAnc=G;QD=38.08;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=290;mSC=0.966;pSC=0.442	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:70:99:2699,211,0:0,0:0,0:47,23:0,0:0:40.17:0;1/1:26:78.24:1006,78,0:0,0:0,0:18,8:0,0:0:37.00:0	-
17_36871936_G/C	17	36871936	C	ENSG00000108292	ENST00000325718	Transcript	NON_SYNONYMOUS_CODING	982	891	297	D/E	gaC/gaG	-	ENSP=ENSP00000316426;PolyPhen=unknown(0);SIFT=tolerated(0.85);HGNC=MLLT6	G	C/C,G/G	C	C	-	A/A,H/H	.	1.0	.	2.79	0.994	0.985	526	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;BaseQRankSum=0.650;CAnc=C;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=2.79;HRun=0;HaplotypeScore=1.9955;MQ=37.42;MQ0=0;MQRankSum=-0.938;Map20=1;QD=36.81;ReadPosRankSum=-0.072;TS=HPGMC;TSseq=G,C,C,C,C;bSC=526;mSC=0.994;pSC=0.985	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1800,104,0:0,0:31,15:1,0:0,0:0:37.42:0;0/0:22:66.21:0,66,864:0,0:0,0:13,9:0,0:0:37.00:0	+
17_38507681_T/C	17	38507681	C	ENSG00000131759	ENST00000420042	Transcript	NON_SYNONYMOUS_CODING	43	28	10	P/S	Ccc/Tcc	-	ENSP=ENSP00000388570;PolyPhen=unknown(0);HGNC=RARA	T	C/C,C/C	C	C	C	A/A,A/A	rs182610022	0.99	.	-9.07	0.027	0.140	177	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=C;DP=60;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=-9.07;HRun=5;HaplotypeScore=0.0000;MQ=39.20;MQ0=0;Map20=1;OAnc=C;QD=37.77;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=177;mSC=0.027;pSC=0.140	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1544,117,0:0,0:18,21:0,0:0,0:0:39.20:0;1/1:20:60.20:800,60,0:0,0:9,11:0,0:0,0:0:37.00:0	+
17_38547868_C/T	17	38547868	T	ENSG00000131747	ENST00000269577	Transcript	NON_SYNONYMOUS_CODING	4397	4397	1466	D/G	gAc/gGc	-	ENSP=ENSP00000269577;PolyPhen=unknown(0);SIFT=tolerated(0.91);HGNC=TOP2A	C	T/T,T/T	T	T	T	A/A,A/A	rs34300454	0.96	.	4.2	0.006	0.293	193	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.12;AMR_AF=0.02;AN=4;CAnc=T;DP=74;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=4.2;HRun=0;HaplotypeScore=0.0000;MQ=40.28;MQ0=0;Map20=1;OAnc=T;QD=34.62;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=193;mSC=0.006;pSC=0.293	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1556,120,0:0,0:0,0:0,0:20,24:0:40.28:0;1/1:30:90.29:1181,90,0:0,0:0,0:0,0:16,14:0:37.00:0	-
17_39767338_T/C	17	39767338	C	ENSG00000186832	ENST00000301653	Transcript	NON_SYNONYMOUS_CODING	981	916	306	A/T	Gcc/Acc	-	ENSP=ENSP00000301653;PolyPhen=benign(0.005);SIFT=tolerated(1);HGNC=KRT16	T	C/C,T/T	C	C	-	A/A,H/H	rs112891689	0.99	.	2.85	0.997	.	635	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=C;DP=54;Dels=0.00;FS=0.000;GAnc=C;GRP=2.85;HRun;HaplotypeScore=0.0000;MQ=36.32;MQ0=0;Map20=1;QD=37.86;TS=HPG;TSseq=T,C,C;bSC=635;mSC=0.997	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1509,117,0:0,0:25,14:0,0:0,0:0:36.32:0;0/0:15:45.15:0,45,600:0,0:0,0:0,0:7,8:0:37.00:0	-
17_40075161_T/C	17	40075161	C	ENSG00000131473	ENST00000401700	Transcript	NON_SYNONYMOUS_CODING	112	107	36	R/K	aGg/aAg	-	ENSP=ENSP00000386040;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=ACLY	T	C/C,T/T	C	C	C	A/A,H/H	.	1	.	-0.459	0.073	0.007	172	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=39;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.459;HRun;HaplotypeScore=0.0000;MQ=38.19;MQ0=0;Map20=1;OAnc=C;QD=38.27;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=172;mSC=0.073;pSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:25:75.24:990,75,0:0,0:11,14:0,0:0,0:0:38.19:0;0/0:14:42.14:0,42,558:0,0:0,0:0,0:6,8:0:37.00:0	-
17_40181031_C/G	17	40181031	G	ENSG00000187595	ENST00000436535	Transcript	NON_SYNONYMOUS_CODING	740	740	247	S/C	tCc/tGc	-	ENSP=ENSP00000411514;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZNF385C	C	G/G,C/C	G	G	G	A/A,H/H	.	1	.	1.81	0.000	0.496	217	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=64;Dels=0.00;FS=0.000;GAnc=G;GRP=1.81;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.52;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=217;mSC=0.000;pSC=0.496	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1728,132,0:0,0:0,0:18,26:0,0:0:37.00:0;0/0:20:60.19:0,60,776:0,0:10,10:0,0:0,0:0:37.00:0	-
17_41931199_C/T	17	41931199	T	ENSG00000161649	ENST00000317310	Transcript	NON_SYNONYMOUS_CODING	575	506	169	V/A	gTc/gCc	-	ENSP=ENSP00000321005;PolyPhen=benign(0);SIFT=tolerated(0.66);HGNC=CD300LG	C	T/T,T/T	T	-	T	A/A,A/A	.	1	.	1.61	0.254	0.419	506	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.568;CAnc=T;DP=61;Dels=0.00;FS=3.928;GRP=1.61;HRun=0;HaplotypeScore=0.9987;MQ=37.71;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=T;QD=37.25;ReadPosRankSum=-0.413;TS=HPO;TSseq=C,T,T;UR;bSC=506;mSC=0.254;pSC=0.419	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:92.06:1597,92,0:0,0:0,1:0,0:25,16:0:37.71:0;1/1:19:57.19:760,57,0:0,0:0,0:0,0:9,10:0:37.00:0	+
17_42338945_T/C	17	42338945	C	ENSG00000004939	ENST00000262418	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	322	166	56	E/K	Gag/Aag	-	ENSP=ENSP00000262418;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLC4A1	T	T/T,C/C	C	C	C	H/H,A/A	rs5036	0.93	CpG	3.57	0.961	.	539	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.10;AMR_AF=0.07;AN=4;ASN_AF=0.10;CAnc=C;CpG;DP=65;EUR_AF=0.02;GAnc=C;GRP=3.57;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=539;mSC=0.961	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,123,1604:0,0:0,0:0,0:21,21:0:37.00:0;1/1:23:69.22:908,69,0:0,0:15,8:0,0:0,0:0:37.00:0	-
17_48245872_G/A	17	48245872	A	ENSG00000108823	ENST00000262018	Transcript	NON_SYNONYMOUS_CODING	559	523	175	I/V	Atc/Gtc	-	ENSP=ENSP00000262018;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=SGCA	G	G/G,A/G	A	A	A	H/H,A/H	.	1	CpG	-0.228	0.933	0.974	730	1	AC=1;AF=0.25;AN=4;CAnc=A;CpG;DP=75;GAnc=A;GRP=-0.228;HRun=0;MQ=37.46;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=730;mSC=0.933;pSC=0.974	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:83.39:0,83,1534:0,3:0,0:25,15:0,0:0:37.46:0;0/1:32:99:367,0,662:8,4:0,0:11,9:0,0:0:37.00:0	+
17_48452756_T/C	17	48452756	C	ENSG00000154920	ENST00000338165	Transcript	NON_SYNONYMOUS_CODING	269	187	63	L/F	Ctt/Ttt	-	ENSP=ENSP00000339897;PolyPhen=benign(0);SIFT=tolerated(0.97);HGNC=EME1	T	C/T,T/T	C	C	C	A/H,H/H	rs17714854	0.98	.	4.68	0.000	0.016	509	1	1000gALT=C;AC=1;AF=0.25;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.02;AN=4;BaseQRankSum=-0.010;CAnc=C;DP=87;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=4.68;HRun=0;HaplotypeScore=0.9997;MQ=38.21;MQ0=0;MQRankSum=-1.310;Map20=1;OAnc=C;QD=16.73;ReadPosRankSum=1.090;TS=HPGOMC;TSseq=T,C,C,C,C,G;UR;bSC=509;mSC=0.000;pSC=0.016	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:49:99:850,0,792:0,0:12,13:0,0:11,13:0:38.21:0;0/0:38:99:0,114,1515:0,0:0,0:0,0:18,20:0:37.00:0	+
17_49043640_T/C	17	49043640	C	ENSG00000008294	ENST00000262013	Transcript	NON_SYNONYMOUS_CODING	4168	3959	1320	S/N	aGt/aAt	-	ENSP=ENSP00000262013;PolyPhen=benign(0);SIFT=tolerated(0.94);HGNC=SPAG9	T	C/C,C/C	C	C	C	A/A,A/A	rs9896965	0.94	.	0.179	0.997	0.787	341	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.25;AMR_AF=0.03;AN=4;CAnc=C;DP=68;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=0.179;HRun=0;HaplotypeScore=2.9719;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=38.29;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=341;mSC=0.997;pSC=0.787	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1450,111,0:0,0:17,18:0,0:0,0:0:37.81:0;1/1:31:93.28:1208,93,0:0,0:21,10:0,0:0,0:0:37.00:0	-
17_54990797_T/C	17	54990797	C	ENSG00000121060	ENST00000316881	Transcript	NON_SYNONYMOUS_CODING	603	553	185	A/T	Gcc/Acc	-	ENSP=ENSP00000323889;PolyPhen=benign(0.005);SIFT=tolerated(0.91);HGNC=TRIM25	T	T/T,C/C	C	C	C	H/H,A/A	rs61731983	0.97	.	-5.77	0.000	0.855	711	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.13;AMR_AF=0.01;AN=4;CAnc=C;DP=54;GAnc=C;GRP=-5.77;HRun;MQ=37.59;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=711;mSC=0.000;pSC=0.855	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:34:99:0,102,1332:0,0:0,0:0,0:16,16:0:37.59:0;1/1:20:60.19:777,60,0:0,0:8,12:0,0:0,0:0:37.00:0	-
17_58235779_G/A	17	58235779	A	ENSG00000167434	ENST00000300900	Transcript	NON_SYNONYMOUS_CODING	810	716	239	Q/R	cAg/cGg	-	ENSP=ENSP00000300900;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CA4	G	G/G,A/A	A	A	A	H/H,A/A	rs76995634	0.99	CpG	1.96	0.008	0.666	408	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.02;AN=4;CAnc=A;CpG;DP=76;GAnc=A;GRP=1.96;HRun=0;MQ=38.88;MQ0=0;Map20=1;OAnc=A;TS=HPGOM;TSseq=G,A,A,A,A;bSC=408;mSC=0.008;pSC=0.666	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,138,1808:0,0:0,0:20,26:0,0:0:38.88:0;1/1:29:87.28:1147,87,0:11,18:0,0:0,0:0,0:0:37.00:0	+
17_58786681_A/G	17	58786681	G	ENSG00000141376	ENST00000390652	Transcript	NON_SYNONYMOUS_CODING	425	316	106	V/I	Gtc/Atc	-	ENSP=ENSP00000375067;PolyPhen=benign(0.003);SIFT=tolerated(0.11);HGNC=BCAS3	A	G/G,G/G	G	G	G	A/A,A/A	rs34712615	0.93	CpG	3.53	1.000	0.628	567	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.27;AMR_AF=0.04;AN=4;CAnc=G;CpG;DP=72;Dels=0.00;FS=0.000;GAnc=G;GRP=3.53;HRun=0;HaplotypeScore=1.9318;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.26;TS=HPGOM;TSseq=A,G,G,A,G;UR;bSC=567;mSC=1.000;pSC=0.628	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1793,138,0:0,0:0,0:20,25:0,0:0:37.00:0;1/1:26:38.24:926,38,0:0,1:0,0:16,9:0,0:0:37.00:0	+
17_61562322_T/C	17	61562322	C	ENSG00000159640	ENST00000290863	Transcript	NON_SYNONYMOUS_CODING	146	94	32	P/S	Ccc/Tcc	-	ENSP=ENSP00000290863;PolyPhen=benign(0);SIFT=tolerated(0.12);HGNC=ACE	T	C/C,C/C	C	C	C	A/A,A/A	rs4317	0.95	.	-4.84	0.000	0.001	418	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.20;AMR_AF=0.02;AN=4;BaseQRankSum=-0.030;CAnc=C;DP=58;Dels=0.00;FS=0.000;GAnc=C;GRP=-4.84;HRun=3;HaplotypeScore=2.9787;MQ=37.49;MQ0=0;MQRankSum=-1.301;Map20=1;OAnc=C;QD=34.52;ReadPosRankSum=1.422;TS=HPGOMC;TSseq=T,C,C,C,A,A;bSC=418;mSC=0.000;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:55.71:1449,56,0:0,0:19,20:0,0:1,1:0:37.49:0;1/1:17:51.16:670,51,0:0,0:9,8:0,0:0,0:0:37.00:0	+
17_61562373_A/G	17	61562373	G	ENSG00000159640	ENST00000290863	Transcript	NON_SYNONYMOUS_CODING	197	145	49	G/S	Ggc/Agc	-	ENSP=ENSP00000290863;PolyPhen=benign(0);SIFT=tolerated(0.65);HGNC=ACE	A	G/G,G/G	G	G	G	A/A,A/A	rs4318	0.95	CpG,RM	-0.988	0.009	0.045	418	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.20;AMR_AF=0.02;AN=4;BaseQRankSum=0.851;CAnc=G;CpG;DP=75;Dels=0.00;FS=7.301;GAnc=G;GRP=-0.988;HRun;HaplotypeScore=1.8664;MQ=37.62;MQ0=0;MQRankSum=-1.728;Map20=1;OAnc=G;QD=36.06;RM;ReadPosRankSum=-0.026;TS=HPGOMC;TSseq=A,G,G,A,G,A;bSC=418;mSC=0.009;pSC=0.045	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:71.97:1764,72,0:0,2:0,0:27,19:0,0:0:37.62:0;1/1:27:78.23:1005,78,0:0,0:0,0:14,13:0,0:0:37.00:0	+
17_62079132_C/T	17	62079132	T	ENSG00000224383	ENST00000425164	Transcript	NON_SYNONYMOUS_CODING	522	508	170	W/R	Tgg/Cgg	-	ENSP=ENSP00000396936;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C17orf72	C	C/C,T/T	T	T	T	H/H,A/A	.	1	CpG	-6.11	0.000	0.088	624	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=53;GAnc=T;GRP=-6.11;HRun=0;MQ=37.93;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=624;mSC=0.000;pSC=0.088	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:32:93.30:0,93,1227:0,0:12,19:0,0:1,0:0:37.93:0;1/1:21:63.20:826,63,0:0,0:0,0:0,0:5,16:0:37.00:0	+
17_62290457_C/T	17	62290457	T	ENSG00000136478	ENST00000258991	Transcript	NON_SYNONYMOUS_CODING	1272	1121	374	D/G	gAt/gGt	-	ENSP=ENSP00000258991;PolyPhen=benign(0.002);SIFT=tolerated(0.7);HGNC=TEX2	C	T/T,T/T	T	T	T	A/A,A/A	.	1	.	6.17	0.052	0.139	493	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.948;CAnc=T;DP=87;Dels=0.00;FS=3.441;GAnc=T;GRP=6.17;HRun=0;HaplotypeScore=0.9789;MQ=37.56;MQ0=0;MQRankSum=1.275;Map20=1;OAnc=T;QD=37.02;ReadPosRankSum=-0.229;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=493;mSC=0.052;pSC=0.139	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1995,120,0:0,0:1,0:0,0:23,29:0:37.56:0;1/1:34:99:1348,102,0:0,0:0,0:0,0:18,16:0:37.00:0	-
17_68128259_A/G	17	68128259	G	ENSG00000153822	ENST00000283936	Transcript	NON_SYNONYMOUS_CODING	517	31	11	V/I	Gtc/Atc	-	ENSP=ENSP00000283936;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KCNJ16	A	G/G,G/G	G	G	G	A/A,A/A	rs9302912	0.93	.	5.99	0.105	0.594	600	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.27;AMR_AF=0.03;AN=4;BaseQRankSum=-0.983;CAnc=G;DP=65;Dels=0.00;FS=0.000;GAnc=G;GRP=5.99;HRun=0;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;MQRankSum=0.328;Map20=1;OAnc=G;QD=36.85;ReadPosRankSum=-0.515;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=600;mSC=0.105;pSC=0.594	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:71.36:1396,71,0:1,0:0,0:19,17:0,0:0:37.81:0;1/1:28:84.26:1085,84,0:0,0:0,0:14,14:0,0:0:37.00:0	+
17_72588735_A/G	17	72588735	G	ENSG00000182352	ENST00000328023	Transcript	NON_SYNONYMOUS_CODING	857	550	184	G/R	Ggg/Agg	-	ENSP=ENSP00000329353;PolyPhen=unknown(0);HGNC=C17orf77	A	G/G,A/A	G	G	-	A/A,H/H	.	1	CpG	-2.47	.	0.086	900	1	AC=2;AF=0.50;AN=4;BaseQRankSum=1.652;CAnc=G;CpG;DP=62;Dels=0.00;FS=0.000;GAnc=G;GRP=-2.47;HRun=3;HaplotypeScore=0.9983;MQ=37.69;MQ0=0;MQRankSum=-1.733;Map20=1;QD=37.33;ReadPosRankSum=-0.121;TS=HPGMC;TSseq=A,G,G,G,-;bSC=900;pSC=0.086	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:95.99:1638,96,0:0,1:0,0:19,23:0,0:0:37.69:0;0/0:19:54.17:0,54,704:11,8:0,0:0,0:0,0:0:37.00:0	+
17_73016489_C/T	17	73016489	T	ENSG00000167862	ENST00000301585	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	367	365	122	M/T	aTg/aCg	-	ENSP=ENSP00000301585;PolyPhen=benign(0.007);SIFT=tolerated(0.44);HGNC=ICT1	C	T/T,T/T	T	T	T	A/A,A/A	rs34496172	0.94	CpG	-11.3	0.033	0.827	646	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.20;AMR_AF=0.03;AN=4;CAnc=T;CpG;DP=67;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=-11.3;HRun=0;HaplotypeScore=0.0000;MQ=38.24;MQ0=0;Map20=1;OAnc=T;QD=35.52;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=646;mSC=0.033;pSC=0.827	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1454,111,0:0,0:0,0:0,0:22,18:0:38.24:0;1/1:27:81.26:1059,81,0:0,0:0,0:0,0:11,16:0:37.00:0	+
17_73753035_G/A	17	73753035	A	ENSG00000132470	ENST00000200181	Transcript	NON_SYNONYMOUS_CODING	5252	5065	1689	T/A	Aca/Gca	-	ENSP=ENSP00000200181;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ITGB4	G	A/A,A/A	A	A	A	A/A,A/A	.	1	CpG	4.93	0.869	0.318	649	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.733;CAnc=A;CpG;DP=65;Dels=0.00;FS=3.716;GAnc=A;GRP=4.93;HRun=0;HaplotypeScore=0.9997;MQ=39.20;MQ0=0;MQRankSum=-1.473;Map20=1;OAnc=A;QD=36.44;ReadPosRankSum=1.299;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=649;mSC=0.869;pSC=0.318	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:80.37:1491,80,0:16,23:0,0:1,0:0,0:0:39.20:0;1/1:25:75.23:954,75,0:15,10:0,0:0,0:0,0:0:37.00:0	+
17_73753305_G/A	17	73753305	A	ENSG00000132470	ENST00000200181	Transcript	NON_SYNONYMOUS_CODING	5430	5243	1748	H/R	cAt/cGt	-	ENSP=ENSP00000200181;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ITGB4	G	A/A,A/A	A	A	A	A/A,A/A	rs151053969	1.0	CpG	1.09	0.219	0.244	645	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-1.621;CAnc=A;CpG;DP=51;Dels=0.00;FS=3.632;GAnc=A;GRP=1.09;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=1.509;Map20=1;OAnc=A;QD=33.26;ReadPosRankSum=1.509;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=645;mSC=0.219;pSC=0.244	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:53.27:1130,53,0:13,19:0,0:1,0:0,0:0:37.00:0;1/1:18:51.17:679,51,0:10,8:0,0:0,0:0,0:0:37.00:0	+
17_73888858_C/T	17	73888858	T	ENSG00000141569	ENST00000269383	Transcript	NON_SYNONYMOUS_CODING	554	488	163	H/R	cAc/cGc	-	ENSP=ENSP00000269383;PolyPhen=benign(0.01);SIFT=tolerated(0.14);HGNC=TRIM65	C	T/C,C/C	T	T	T	A/H,H/H	.	1	CpG	.	.	.	398	.	AC=1;AF=0.25;AN=4;BaseQRankSum=1.375;CAnc=T;CpG;DP=60;Dels=0.00;FS=4.655;GAnc=T;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-0.961;OAnc=T;QD=12.09;ReadPosRankSum=-0.163;TS=HPGOMC;TSseq=C,-,T,T,T,T;UR;bSC=398	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:41:99:526,0,745:0,0:10,12:0,0:13,6:0:37.00:0;0/0:19:57.19:0,57,760:0,0:10,9:0,0:0,0:0:37.00:0	-
17_74004839_A/G	17	74004839	G	ENSG00000167880	ENST00000301607	Transcript	NON_SYNONYMOUS_CODING	4675	4447	1483	R/W	Cgg/Tgg	-	ENSP=ENSP00000301607;PolyPhen=benign(0);SIFT=tolerated(0.69);HGNC=EVPL	A	A/A,G/G	G	G	G	H/H,A/A	rs138016423	1.0	CpG	2.88	0.000	0.917	500	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;CpG;DP=67;GAnc=G;GRP=2.88;HRun=0;MQ=37.61;MQ0=0;Map20=1;OAnc=G;TS=HPGO;TSseq=A,G,G,G;bSC=500;mSC=0.000;pSC=0.917	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:49:99:0,144,1911:20,27:0,0:0,0:0,0:0:37.61:0;1/1:18:54.16:693,54,0:0,0:0,0:10,8:0,0:0:37.00:0	-
17_74015120_C/T	17	74015120	T	ENSG00000167880	ENST00000301607	Transcript	NON_SYNONYMOUS_CODING	1387	1159	387	I/V	Atc/Gtc	-	ENSP=ENSP00000301607;PolyPhen=benign(0);SIFT=tolerated(0.26);HGNC=EVPL	C	T/C,C/C	T	T	C	A/H,H/H	.	1	CpG	-8.2	0.000	0.029	624	1	AC=1;AF=0.25;AN=4;BaseQRankSum=1.652;CAnc=T;CpG;DP=58;Dels=0.00;FS=1.384;GAnc=T;GRP=-8.2;HRun=0;HaplotypeScore=1.9995;MQ=37.75;MQ0=0;MQRankSum=-0.163;Map20=1;OAnc=C;QD=14.93;ReadPosRankSum=0.488;TS=HPGO;TSseq=C,T,T,C;bSC=624;mSC=0.000;pSC=0.029	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:40:99:627,0,706:0,0:5,16:0,0:6,13:0:37.75:0;0/0:18:54.16:0,54,695:0,0:9,9:0,0:0,0:0:37.00:0	-
17_76230693_T/G	17	76230693	G	ENSG00000204278	ENST00000374946	Transcript	NON_SYNONYMOUS_CODING	834	210	70	M/I	atG/atT	-	ENSP=ENSP00000364084;PolyPhen=benign(0.002);SIFT=tolerated(0.26);HGNC=TMEM235	T	G/G,G/G	G	G	G	A/A,A/A	rs79885699	0.93	.	1.39	0.606	0.457	958	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.04;AMR_AF=0.09;AN=4;BaseQRankSum=0.360;CAnc=G;DP=57;Dels=0.00;EUR_AF=0.13;FS=3.016;GAnc=G;GRP=1.39;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-0.294;Map20=1;OAnc=G;QD=34.78;ReadPosRankSum=-0.621;TS=HPGO;TSseq=T,G,G,G;UR;bSC=958;mSC=0.606;pSC=0.457	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:34.36:1355,34,0:0,0:0,0:16,20:0,2:0:37.00:0;1/1:19:57.18:748,57,0:0,0:0,0:7,12:0,0:0:37.00:0	+
17_76565267_T/C	17	76565267	C	ENSG00000187775	ENST00000389840	Transcript	NON_SYNONYMOUS_CODING	1390	1265	422	R/Q	cGg/cAg	-	ENSP=ENSP00000374490;PolyPhen=benign(0);SIFT=tolerated(0.25);HGNC=DNAH17	T	T/T,C/C	C	C	C	H/H,A/A	rs61747155	0.99	CpG	-1.76	0.011	0.025	964	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=C;CpG;DP=104;GAnc=C;GRP=-1.76;HRun;MQ=37.88;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,T,T;UR;bSC=964;mSC=0.011;pSC=0.025	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:68:99:0,196,2559:0,0:0,0:0,0:39,29:1:37.88:0;1/1:36:99:1382,105,0:0,0:18,18:0,0:0,0:0:37.00:0	-
17_78172511_T/C	17	78172511	C	ENSG00000141527	ENST00000309710	Transcript	NON_SYNONYMOUS_CODING	1421	1261	421	P/S	Cct/Tct	-	ENSP=ENSP00000308507;PolyPhen=possibly_damaging(0.545);SIFT=deleterious(0);HGNC=CARD14	T	C/C,T/T	C	C	C	A/A,H/H	.	1	.	-1.72	.	0.085	923	1	AC=2;AF=0.50;AN=4;BaseQRankSum=0.317;CAnc=C;DP=64;Dels=0.00;FS=3.112;GAnc=C;GRP=-1.72;HRun=2;HaplotypeScore=0.0000;MQ=38.72;MQ0=0;MQRankSum=0.606;Map20=1;OAnc=C;QD=34.01;ReadPosRankSum=-0.548;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=923;pSC=0.085	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:50.81:1495,51,0:0,0:20,20:0,0:0,2:0:38.72:0;0/0:21:63.18:0,63,803:0,0:0,0:0,0:12,9:0:37.00:0	+
17_78195447_C/G	17	78195447	G	ENSG00000181045	ENST00000361193	Transcript	NON_SYNONYMOUS_CODING	368	88	30	V/L	Gtg/Ctg	-	ENSP=ENSP00000355384;PolyPhen=benign(0.001);SIFT=tolerated(0.54);HGNC=SLC26A11	C	G/G,G/G	G	G	G	A/A,A/A	rs76464091	0.99	CpG	-8.2	0.000	0.016	923	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=42;Dels=0.00;FS=0.000;GAnc=G;GRP=-8.2;HRun=0;HaplotypeScore=0.0000;MQ=37.93;MQ0=0;Map20=1;OAnc=G;QD=37.04;TS=HPGOMC;TSseq=C,N,G,G,G,C;bSC=923;mSC=0.000;pSC=0.016	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:93.30:1218,93,0:0,1:0,0:19,11:0,0:0:37.93:0;1/1:10:30.10:400,30,0:0,0:0,0:5,5:0,0:0:37.00:0	+
17_79095827_C/G	17	79095827	G	ENSG00000181409	ENST00000326724	Transcript	NON_SYNONYMOUS_CODING	1934	1909	637	P/A	Ccc/Gcc	-	ENSP=ENSP00000324196;PolyPhen=benign(0);SIFT=tolerated(0.69);HGNC=AATK	C	C/C,G/G	G	G	G	H/H,A/A	.	1	.	-1.69	0.003	0.015	929	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=44;GAnc=G;GRP=-1.69;HRun=2;MQ=38.14;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=929;mSC=0.003;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:26:78.25:0,78,1023:0,0:13,13:0,0:0,0:0:38.14:0;1/1:18:54.17:708,54,0:0,0:0,0:9,9:0,0:0:37.00:0	-
17_79176142_A/G	17	79176142	G	ENSG00000141577	ENST00000269392	Transcript	NON_SYNONYMOUS_CODING	934	686	229	P/L	cCg/cTg	-	ENSP=ENSP00000269392;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=AZI1	A	G/G,G/G	G	G	-	A/A,A/A	rs111681839	0.99	CpG	2.82	0.011	0.008	856	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;CAnc=G;CpG;DP=59;Dels=0.00;FS=0.000;GAnc=G;GRP=2.82;HRun;HaplotypeScore=0.9997;MQ=38.44;MQ0=0;Map20=1;QD=37.74;TS=HPG;TSseq=A,G,G;bSC=856;mSC=0.011;pSC=0.008	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1581,120,0:0,0:0,0:16,21:0,0:0:38.44:0;1/1:18:54.16:705,54,0:0,0:0,0:11,7:0,0:0:37.00:0	-
17_79182797_T/C	17	79182797	C	ENSG00000141577	ENST00000269392	Transcript	NON_SYNONYMOUS_CODING	451	203	68	R/Q	cGg/cAg	-	ENSP=ENSP00000269392;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=AZI1	T	C/C,C/C	C	C	-	A/A,A/A	rs114818475	0.98	CpG	3.78	0.569	0.449	862	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AN=4;CAnc=C;CpG;DP=69;Dels=0.00;FS=0.000;GAnc=C;GRP=3.78;HRun=2;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;QD=37.55;TS=HPGM;TSseq=T,C,C,C;bSC=862;mSC=0.569;pSC=0.449	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1760,132,0:0,0:18,26:0,0:2,0:0:37.00:0;1/1:23:69.22:904,69,0:0,0:10,13:0,0:0,0:0:37.00:0	-
17_79203114_G/C	17	79203114	C	ENSG00000167302	ENST00000300714	Transcript	NON_SYNONYMOUS_CODING	1250	1192	398	A/P	Gcg/Ccg	-	ENSP=ENSP00000300714;PolyPhen=benign(0);SIFT=tolerated(0.72);HGNC=C17orf56	G	C/C,C/C	C	C	-	A/A,A/A	rs74548896	0.99	CpG	-2.17	0.000	0.098	846	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=C;CpG;DP=56;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.17;HRun=0;HaplotypeScore=1.9944;MQ=37.90;MQ0=0;Map20=1;QD=38.05;TS=HPGMC;TSseq=G,C,C,C,C;bSC=846;mSC=0.000;pSC=0.098	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1289,99,0:0,0:17,15:0,0:0,0:0:37.90:0;1/1:23:66.21:870,66,0:0,0:12,10:0,0:1,0:0:37.00:0	-
17_79514871_C/T	17	79514871	T	ENSG00000185504	ENST00000425898	Transcript	NON_SYNONYMOUS_CODING	654	184	62	R/G	Agg/Ggg	-	ENSP=ENSP00000399674;PolyPhen=unknown(0);HGNC=C17orf70	C	T/T,T/T	T	T	T	A/A,A/A	.	1	CpG	-2.39	0.000	0.004	912	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.520;CAnc=T;CpG;DP=62;Dels=0.00;FS=0.000;GAnc=T;GRP=-2.39;HRun=0;HaplotypeScore=0.0000;MQ=37.69;MQ0=0;MQRankSum=0.173;Map20=1;OAnc=T;QD=33.00;ReadPosRankSum=-1.473;TS=HPGOMC;TSseq=C,T,T,T,C,T;bSC=912;mSC=0.000;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:77.37:1452,77,0:0,0:0,1:0,0:22,19:0:37.69:0;1/1:19:57.18:747,57,0:0,0:0,0:0,0:9,10:0:37.00:0	-
17_79668341_G/A	17	79668341	A	ENSG00000185359	ENST00000575078	Transcript	NON_SYNONYMOUS_CODING	293	293	98	H/R	cAc/cGc	-	ENSP=ENSP00000460130;PolyPhen=possibly_damaging(0.694);HGNC=HGS	G	A/A,G/G	A	A	A	A/A,H/H	.	1	CpG	1.65	.	0.002	846	1	AC=2;AF=0.50;AN=4;BaseQRankSum=1.575;CAnc=A;CpG;DP=84;Dels=0.00;FS=0.000;GAnc=A;GRP=1.65;HRun=0;HaplotypeScore=0.9332;MQ=38.77;MQ0=0;MQRankSum=-1.181;Map20=1;OAnc=A;QD=36.28;ReadPosRankSum=1.496;TS=HPGOMC;TSseq=G,A,A,A,G,-;bSC=846;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1666,126,0:31,13:0,0:1,0:0,0:0:38.77:0;0/0:39:99:0,117,1548:0,0:0,0:19,20:0,0:0:37.00:0	+
17_80006980_G/A	17	80006980	A	ENSG00000169733	ENST00000310496	Transcript	NON_SYNONYMOUS_CODING	849	841	281	Y/H	Tat/Cat	-	ENSP=ENSP00000307971;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RFNG	G	A/A,A/A	A	A	A	A/A,A/A	.	1	.	2.3	0.016	0.003	884	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=78;Dels=0.01;FS=0.000;GAnc=A;GRP=2.3;HRun=0;HaplotypeScore=3.8660;MQ=37.62;MQ0=0;Map20=1;OAnc=A;QD=37.07;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=884;mSC=0.016;pSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1812,138,0:32,15:0,0:0,0:0,0:0:37.62:0;1/1:30:90.29:1192,90,0:12,18:0,0:0,0:0,0:0:37.00:0	-
17_80280054_A/C	17	80280054	C	ENSG00000141574	ENST00000269389	Transcript	NON_SYNONYMOUS_CODING	1128	730	244	D/Y	Gat/Tat	-	ENSP=ENSP00000269389;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SECTM1	A	C/C,C/C	C	C	C	A/A,A/A	rs61738919	0.95	.	-0.758	0.000	0.048	895	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.12;AMR_AF=0.06;AN=4;BaseQRankSum=-1.310;CAnc=C;DP=63;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-0.758;HRun=0;HaplotypeScore=0.9997;MQ=37.73;MQ0=0;MQRankSum=-0.465;Map20=1;OAnc=C;QD=36.74;ReadPosRankSum=0.296;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=895;mSC=0.000;pSC=0.048	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:83.39:1539,83,0:0,1:17,23:0,0:0,0:0:37.73:0;1/1:22:66.19:854,66,0:0,0:11,11:0,0:0,0:0:37.00:0	-
17_80399056_C/T	17	80399056	T	ENSG00000169660	ENST00000337014	Transcript	NON_SYNONYMOUS_CODING	1582	1166	389	L/P	cTt/cCt	-	ENSP=ENSP00000337854;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=HEXDC	C	T/C,C/C	T	T	T	A/H,H/H	.	0.99	.	0.651	0.992	0.569	809	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.03;AN=4;BaseQRankSum=2.149;CAnc=T;DP=56;Dels=0.00;FS=12.712;GAnc=T;GRP=0.651;HRun=2;HaplotypeScore=2.7881;MQ=37.00;MQ0=0;MQRankSum=1.953;Map20=1;OAnc=T;QD=15.11;ReadPosRankSum=-1.307;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=809;mSC=0.992;pSC=0.569	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:40:99:634,0,643:0,0:14,5:0,0:9,11:0:37.00:0;0/0:16:48.15:0,48,628:0,0:9,7:0,0:0,0:0:37.00:0	+
18_658109_G/T	18	658109	T	ENSG00000176912	ENST00000323813	Transcript	NON_SYNONYMOUS_CODING	232	139	47	S/R	Agt/Cgt	-	ENSP=ENSP00000316465;PolyPhen=unknown(0);HGNC=C18orf56	G	T/G,G/G	T	T	T	A/H,H/H	.	1.0	CpG	-4.32	0.000	0.043	900	1	1000gALT=T;AC=1;AF=0.25;AF1000g=0.00;AN=4;BaseQRankSum=1.955;CAnc=T;CpG;DP=44;Dels=0.00;FS=0.000;GAnc=T;GRP=-4.32;HRun=0;HaplotypeScore=0.9997;MQ=38.03;MQ0=0;MQRankSum=1.596;Map20=1;OAnc=T;QD=20.79;ReadPosRankSum=-0.022;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=900;mSC=0.000;pSC=0.043	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:29:99:633,0,341:0,0:0,0:5,6:7,11:0:38.03:0;0/0:15:45.15:0,45,600:0,0:0,0:3,12:0,0:0:37.00:0	-
18_2890589_G/A	18	2890589	A	ENSG00000132205	ENST00000254528	Transcript	NON_SYNONYMOUS_CODING	623	464	155	K/R	aAg/aGg	-	ENSP=ENSP00000254528;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=EMILIN2	G	A/A,G/G	A	A	A	A/A,H/H	.	1	.	3.04	0.957	0.716	900	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=88;Dels=0.00;FS=0.000;GAnc=A;GRP=3.04;HRun;HaplotypeScore=0.0000;MQ=37.60;MQ0=0;Map20=1;OAnc=A;QD=39.05;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=900;mSC=0.957;pSC=0.716	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1986,150,0:31,19:0,0:0,0:0,0:0:37.60:0;0/0:38:99:0,114,1489:0,0:0,0:19,19:0,0:0:37.00:0	+
18_2890900_A/G	18	2890900	G	ENSG00000132205	ENST00000254528	Transcript	NON_SYNONYMOUS_CODING	934	775	259	V/M	Gtg/Atg	-	ENSP=ENSP00000254528;PolyPhen=benign(0.043);SIFT=tolerated(0.42);HGNC=EMILIN2	A	G/G,A/A	G	G	G	A/A,H/H	rs35267664	0.99	CpG	1.57	0.999	0.327	895	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=82;Dels=0.00;FS=0.000;GAnc=G;GRP=1.57;HRun=0;HaplotypeScore=1.9827;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.27;TS=HPGOMC;TSseq=A,G,G,G,G,A;UR;bSC=895;mSC=0.999;pSC=0.327	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2062,157,0:0,1:0,0:26,26:0,0:0:37.00:0;0/0:29:87.28:0,87,1145:15,14:0,0:0,0:0,0:0:37.00:0	+
18_19085379_A/G	18	19085379	G	ENSG00000141449	ENST00000269218	Transcript	NON_SYNONYMOUS_CODING	4023	3752	1251	S/N	aGt/aAt	-	ENSP=ENSP00000269218;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=GREB1L	A	G/G,G/G	G	G	-	A/A,A/A	.	1	.	4.38	0.300	0.905	208	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=71;Dels=0.00;FS=0.000;GAnc=G;GRP=4.38;HRun=0;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;QD=38.51;TS=HPGMC;TSseq=A,G,G,G,G;UR;bSC=208;mSC=0.300;pSC=0.905	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1727,132,0:0,0:0,0:25,18:0,0:0:37.68:0;1/1:27:81.27:1075,81,0:0,0:0,0:11,16:0,0:0:37.00:0	+
18_24497039_C/A	18	24497039	A	ENSG00000154080	ENST00000284224	Transcript	NON_SYNONYMOUS_CODING	802	516	172	D/E	gaT/gaG	-	ENSP=ENSP00000284224;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=CHST9	C	A/A,C/C	A	A	A	A/A,H/H	rs149359030	1.0	.	-0.787	0.001	0.874	756	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=A;DP=92;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=-0.787;HRun=0;HaplotypeScore=1.9981;MQ=39.25;MQ0=0;Map20=1;OAnc=A;QD=36.55;TS=HPGOMC;TSseq=C,A,A,A,A,A;bSC=756;mSC=0.001;pSC=0.874	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1934,150,0:16,35:0,0:1,0:0,0:0:39.25:0;0/0:40:99:0,120,1553:0,0:14,26:0,0:0,0:0:37.00:0	-
18_28605818_T/G	18	28605818	G	ENSG00000134762	ENST00000360428	Transcript	NON_SYNONYMOUS_CODING	693	538	180	Q/K	Caa/Aaa	-	ENSP=ENSP00000353608;PolyPhen=benign(0.014);SIFT=tolerated(1);HGNC=DSC3	T	G/G,G/G	G	G	G	A/A,A/A	rs35296997	0.99	.	3.12	1.000	0.946	677	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AN=4;BaseQRankSum=0.898;CAnc=G;DP=76;Dels=0.00;FS=3.900;GAnc=G;GRP=3.12;HRun=0;HaplotypeScore=0.9997;MQ=39.17;MQ0=0;MQRankSum=1.540;Map20=1;OAnc=G;QD=37.15;ReadPosRankSum=0.706;TS=HPGOMC;TSseq=T,G,G,G,G,G;UR;bSC=677;mSC=1.000;pSC=0.946	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2039,123,0:0,0:0,0:21,32:1,0:0:39.17:0;1/1:22:66.21:859,66,0:0,0:0,0:10,12:0,0:0:37.00:0	-
18_28983565_T/C	18	28983565	C	ENSG00000175065	ENST00000308128	Transcript	NON_SYNONYMOUS_CODING	1739	1604	535	T/I	aCa/aTa	-	ENSP=ENSP00000311859;PolyPhen=benign(0.001);SIFT=tolerated(0.31);HGNC=DSG4	T	C/C,C/C	C	C	C	A/A,A/A	rs7229252	0.98	.	4.21	0.015	0.956	530	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AN=4;CAnc=C;DP=86;Dels=0.00;FS=0.000;GAnc=C;GRP=4.21;HRun=0;HaplotypeScore=0.0000;MQ=40.14;MQ0=0;Map20=1;OAnc=C;QD=38.00;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=530;mSC=0.015;pSC=0.956	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1781,135,0:0,0:31,14:0,0:1,0:0:40.14:0;1/1:40:99:1495,117,0:0,0:23,17:0,0:0,0:0:37.00:0	+
18_30517995_T/C	18	30517995	C	ENSG00000166960	ENST00000300227	Transcript	NON_SYNONYMOUS_CODING	2681	2470	824	A/T	Gca/Aca	-	ENSP=ENSP00000300227;PolyPhen=benign(0);SIFT=tolerated(0.72);HGNC=C18orf34	T	T/T,C/C	C	C	C	H/H,A/A	rs75955534	0.99	CpG	-8.14	0.000	0.487	647	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=89;GAnc=C;GRP=-8.14;HRun=0;MQ=39.81;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,G,G;bSC=647;mSC=0.000;pSC=0.487	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:62:99:0,181,2340:0,0:0,0:0,0:30,32:0:39.81:0;1/1:27:81.26:1070,81,0:0,0:14,13:0,0:0,0:0:37.00:0	-
18_30847180_C/T	18	30847180	T	ENSG00000166960	ENST00000300227	Transcript	NON_SYNONYMOUS_CODING	1469	1258	420	N/D	Aat/Gat	-	ENSP=ENSP00000300227;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=C18orf34	C	T/T,C/C	T	T	T	A/A,H/H	rs58448816	0.92	.	-2.48	0.000	0.058	800	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.08;AFR_AF=0.13;AMR_AF=0.04;AN=4;ASN_AF=0.13;BaseQRankSum=0.787;CAnc=T;DP=98;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=-2.48;HRun;HaplotypeScore=0.0000;MQ=38.50;MQ0=0;MQRankSum=-0.724;Map20=1;OAnc=T;QD=36.01;ReadPosRankSum=0.598;TS=HPGOMC;TSseq=C,T,T,T,C,C;UR;bSC=800;mSC=0.000;pSC=0.058	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2049,126,0:0,0:1,0:0,0:28,27:0:38.50:0;0/0:42:99:0,126,1616:0,0:25,17:0,0:0,0:0:37.00:0	-
18_43311054_G/A	18	43311054	A	ENSG00000141469	ENST00000321925	Transcript	NON_SYNONYMOUS_CODING	458	226	76	I/V	Atc/Gtc	-	ENSP=ENSP00000318546;PolyPhen=benign(0);SIFT=tolerated(0.46);HGNC=SLC14A1	G	G/G,A/A	A	A	A	H/H,A/A	rs113029149	0.98	CpG	6.06	.	0.683	642	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.02;AN=4;CAnc=A;CpG;DP=70;GAnc=A;GRP=6.06;HRun=0;MQ=39.14;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,-;UR;bSC=642;pSC=0.683	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,123,1590:0,0:0,0:17,23:0,0:0:39.14:0;1/1:29:87.27:1126,87,0:16,13:0,0:0,0:0,0:0:37.00:0	+
18_44181227_C/T	18	44181227	T	ENSG00000167210	ENST00000335730	Transcript	NON_SYNONYMOUS_CODING	400	253	85	I/V	Atc/Gtc	-	ENSP=ENSP00000338222;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=LOXHD1	C	T/T,T/T	T	T	T	A/A,A/A	rs10163657	0.95	CpG	5.56	0.999	0.977	807	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.02;AMR_AF=0.06;AN=4;ASN_AF=0.04;CAnc=T;CpG;DP=54;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=T;GRP=5.56;HRun=0;HaplotypeScore=0.9997;MQ=38.90;MQ0=0;Map20=1;OAnc=T;QD=38.33;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=807;mSC=0.999;pSC=0.977	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.30:1221,93,0:0,0:0,0:0,0:21,10:0:38.90:0;1/1:23:69.23:920,69,0:0,0:0,0:0,0:11,12:0:37.00:0	-
18_51855721_C/T	18	51855721	T	ENSG00000174448	ENST00000307844	Transcript	NON_SYNONYMOUS_CODING	475	475	159	K/E	Aaa/Gaa	-	ENSP=ENSP00000310814;PolyPhen=benign(0);SIFT=tolerated(0.89);HGNC=STARD6	C	T/T,T/T	T	T	T	A/A,A/A	rs2917782	0.94	.	1.23	0.889	0.227	550	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.10;AMR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=T;DP=87;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=T;GRP=1.23;HRun=2;HaplotypeScore=0.0000;MQ=38.99;MQ0=0;Map20=1;OAnc=T;QD=39.27;TS=HPGOMC;TSseq=C,T,T,T,T,-;UR;bSC=550;mSC=0.889;pSC=0.227	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2350,178,0:0,0:0,0:0,0:38,21:0:38.99:0;1/1:28:84.27:1085,84,0:0,0:0,0:0,0:18,10:0:37.00:0	-
18_51888255_T/C	18	51888255	C	ENSG00000166845	ENST00000300091	Transcript	NON_SYNONYMOUS_CODING	858	526	176	P/S	Ccc/Tcc	-	ENSP=ENSP00000300091;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C18orf54	T	T/T,C/C	C	C	C	H/H,A/A	.	1.0	.	-0.909	0.000	0.113	552	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;DP=82;GAnc=C;GRP=-0.909;HRun=2;MQ=38.70;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=552;mSC=0.000;pSC=0.113	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,150,1959:0,0:0,0:0,0:22,29:0:38.70:0;1/1:30:90.29:1182,90,0:0,0:15,15:0,0:0,0:0:37.00:0	+
18_57026361_A/G	18	57026361	G	ENSG00000074695	ENST00000251047	Transcript	NON_SYNONYMOUS_CODING	143	116	39	A/V	gCc/gTc	-	ENSP=ENSP00000251047;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LMAN1	A	A/A,G/G	G	G	G	H/H,A/A	rs33926449	0.92	.	-5.14	0.357	0.596	767	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.08;AFR_AF=0.14;AMR_AF=0.09;AN=4;CAnc=G;DP=42;EUR_AF=0.09;GAnc=G;GRP=-5.14;HRun;MQ=38.10;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=767;mSC=0.357;pSC=0.596	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:27:81.26:0,81,1064:10,17:0,0:0,0:0,0:0:38.10:0;1/1:15:45.15:597,45,0:0,0:0,0:4,11:0,0:0:37.00:0	-
19_362283_C/T	19	362283	T	ENSG00000105549	ENST00000342640	Transcript	NON_SYNONYMOUS_CODING	1100	1057	353	N/D	Aac/Gac	-	ENSP=ENSP00000340088;PolyPhen=benign(0.004);SIFT=tolerated(0.74);HGNC=THEG	C	T/T,T/T	T	T	-	A/A,A/A	rs3764656	0.93	CpG	1.85	0.397	0.048	982	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.20;BaseQRankSum=-1.568;CAnc=T;CpG;DP=66;Dels=0.00;EUR_AF=0.01;FS=3.575;GAnc=T;GRP=1.85;HRun;HaplotypeScore=2.5777;MQ=36.95;MQ0=0;MQRankSum=-1.403;Map20=1;QD=35.52;ReadPosRankSum=0.990;TS=HPGMC;TSseq=C,T,T,T,N;bSC=982;mSC=0.397;pSC=0.048	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:83.40:1560,83,0:0,0:0,1:0,0:24,18:0:36.95:0;1/1:23:69.22:901,69,0:0,0:0,0:0,0:11,12:0:37.00:0	-
19_1615664_T/G	19	1615664	G	ENSG00000071564	ENST00000395423	Transcript	NON_SYNONYMOUS_CODING	1482	1454	485	P/H	cCc/cAc	-	ENSP=ENSP00000378813;PolyPhen=unknown(0);SIFT=tolerated(0.28);HGNC=TCF3	T	G/G,G/G	G	G	G	A/A,A/A	rs28655701	0.98	.	-1.79	.	0.324	970	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.01;AN=4;BaseQRankSum=-1.494;CAnc=G;DP=48;Dels=0.00;FS=3.163;GAnc=G;GRP=-1.79;HRun;HaplotypeScore=2.9660;MQ=37.00;MQ0=0;MQRankSum=-0.418;Map20=1;OAnc=G;QD=35.28;ReadPosRankSum=-1.016;TS=HPGOMC;TSseq=T,G,N,G,N,N;bSC=970;pSC=0.324	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:47.27:1056,47,0:0,0:0,0:13,15:1,0:0:37.00:0;1/1:19:57.13:680,57,0:0,0:0,0:8,11:0,0:0:37.00:0	-
19_2097641_T/C	19	2097641	C	ENSG00000099840	ENST00000395296	Transcript	NON_SYNONYMOUS_CODING	505	428	143	P/L	cCa/cTa	-	ENSP=ENSP00000378709;PolyPhen=benign(0);SIFT=tolerated(0.18);HGNC=IZUMO4	T	C/C,C/C	C	C	C	A/A,A/A	rs115783655	0.98	.	2.13	0.000	0.560	970	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.02;AN=4;BaseQRankSum=0.515;CAnc=C;DP=56;Dels=0.00;EUR_AF=0.01;FS=3.129;GAnc=C;GRP=2.13;HRun=2;HaplotypeScore=0.0000;MQ=38.60;MQ0=0;MQRankSum=0.609;Map20=1;OAnc=C;QD=36.21;ReadPosRankSum=-0.609;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=970;mSC=0.000;pSC=0.560	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:71.35:1373,71,0:0,0:19,17:0,0:0,1:0:38.60:0;1/1:19:57.17:725,57,0:0,0:8,11:0,0:0,0:0:37.00:0	+
19_2434033_A/T	19	2434033	T	ENSG00000176619	ENST00000325327	Transcript	NON_SYNONYMOUS_CODING	1336	1213	405	M/L	Atg/Ttg	-	ENSP=ENSP00000327054;PolyPhen=benign(0.002);SIFT=tolerated(0.25);HGNC=LMNB2	A	T/T,T/T	T	T	T	A/A,A/A	.	1	.	-4.53	0.000	0.015	970	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=49;Dels=0.00;FS=0.000;GAnc=T;GRP=-4.53;HRun=0;HaplotypeScore=0.9933;MQ=37.83;MQ0=0;Map20=1;OAnc=T;QD=37.04;TS=HPGOMC;TSseq=A,T,T,T,T,T;bSC=970;mSC=0.000;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1366,105,0:0,0:0,0:0,0:18,17:0:37.83:0;1/1:13:39.12:510,39,0:0,0:0,0:0,0:6,7:0:36.22:0	-
19_3496596_T/C	19	3496596	C	ENSG00000129932	ENST00000250937	Transcript	NON_SYNONYMOUS_CODING	380	217	73	V/M	Gtg/Atg	-	ENSP=ENSP00000250937;PolyPhen=benign(0);SIFT=tolerated(0.87);HGNC=DOHH	T	C/C,T/T	C	C	C	A/A,H/H	rs112890399	1.0	CpG	3.15	0.956	0.699	952	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=3.15;HRun=0;HaplotypeScore=0.0000;MQ=37.65;MQ0=0;Map20=1;OAnc=C;QD=38.19;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=952;mSC=0.956;pSC=0.699	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1790,138,0:0,0:21,25:0,0:0,0:0:37.65:0;0/0:17:51.16:0,51,660:0,0:0,0:0,0:5,12:0:37.00:0	-
19_3547315_C/G	19	3547315	G	ENSG00000161091	ENST00000355415	Transcript	NON_SYNONYMOUS_CODING	1148	978	326	F/L	ttC/ttG	-	ENSP=ENSP00000347583;PolyPhen=benign(0.026);SIFT=tolerated(0.49);HGNC=MFSD12	C	G/G,G/G	G	G	G	A/A,A/A	.	1.0	.	5.11	0.866	0.894	940	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=5.11;HRun=0;HaplotypeScore=1.7329;MQ=37.42;MQ0=0;Map20=1;OAnc=G;QD=38.44;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=940;mSC=0.866;pSC=0.894	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1878,144,0:0,0:0,0:24,23:0,0:0:37.42:0;1/1:27:78.25:1030,78,0:0,0:0,0:11,16:0,0:0:37.00:0	-
19_6008188_A/C	19	6008188	C	ENSG00000087903	ENST00000303657	Transcript	NON_SYNONYMOUS_CODING	1332	1063	355	V/F	Gtc/Ttc	-	ENSP=ENSP00000306335;PolyPhen=benign(0);SIFT=tolerated(0.59);HGNC=RFX2	A	C/C,A/A	C	C	C	A/A,H/H	rs79564339	0.98	CpG	0.556	0.000	0.509	923	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AN=4;ASN_AF=0.06;CAnc=C;CpG;DP=56;Dels=0.00;FS=0.000;GAnc=C;GRP=0.556;HRun=0;HaplotypeScore=2.9953;MQ=37.49;MQ0=0;Map20=1;OAnc=C;QD=35.95;TS=HPGOMC;TSseq=A,C,C,C,C,C;UR;bSC=923;mSC=0.000;pSC=0.509	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1507,117,0:0,0:23,14:0,0:2,0:0:37.49:0;0/0:15:45.15:0,45,600:7,8:0,0:0,0:0,0:0:37.00:0	-
19_6187805_G/C	19	6187805	C	ENSG00000130377	ENST00000252669	Transcript	NON_SYNONYMOUS_CODING	2118	1876	626	Q/E	Caa/Gaa	-	ENSP=ENSP00000252669;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ACSBG2	G	C/C,G/G	C	C	C	A/A,H/H	rs17856651	0.91	.	4.42	0.110	0.342	.	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.26;AMR_AF=0.03;AN=4;ASN_AF=0.04;CAnc=C;DP=116;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=4.42;HRun=0;HaplotypeScore=0.0000;MQ=37.86;MQ0=0;Map20=1;OAnc=C;QD=38.17;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;mSC=0.110;pSC=0.342	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:69:99:2667,205,0:0,0:48,20:0,0:1,0:0:37.86:0;0/0:47:99:0,141,1836:0,0:0,0:24,23:0,0:0:37.00:0	+
19_7705487_T/G	19	7705487	G	ENSG00000076944	ENST00000320400	Transcript	NON_SYNONYMOUS_CODING	1330	687	229	M/I	atG/atT	-	ENSP=ENSP00000318233;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=STXBP2	T	T/T,G/G	G	G	G	H/H,A/A	rs115098970	0.99	.	-0.317	0.000	0.011	829	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=G;DP=58;GAnc=G;GRP=-0.317;HRun=0;MQ=37.81;MQ0=0;Map20=1;OAnc=G;TS=HPGOC;TSseq=T,G,G,G,G;bSC=829;mSC=0.000;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:37:99:0,108,1399:0,0:0,0:0,0:20,17:0:37.81:0;1/1:21:63.20:820,63,0:0,0:0,0:8,13:0,0:0:36.52:0	+
19_10221642_A/G	19	10221642	G	ENSG00000130810	ENST00000253107	Transcript	NON_SYNONYMOUS_CODING	1329	1223	408	R/Q	cGg/cAg	-	ENSP=ENSP00000253107;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PPAN	A	G/G,G/G	G	G	G	A/A,A/A	rs11559188	0.95	CpG	0.3	0.000	0.005	707	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.17;AMR_AF=0.02;AN=4;ASN_AF=0.03;BaseQRankSum=0.193;CAnc=G;CpG;DP=48;Dels=0.00;FS=4.301;GAnc=G;GRP=0.3;HRun;HaplotypeScore=1.9995;MQ=37.83;MQ0=0;MQRankSum=0.096;Map20=1;OAnc=G;QD=34.97;ReadPosRankSum=0.866;TS=HPGOMC;TSseq=A,G,G,G,G,C;bSC=707;mSC=0.000;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:68.30:1292,68,0:0,1:0,0:22,11:0,0:0:37.83:0;1/1:12:36.12:477,36,0:0,0:0,0:6,6:0,0:0:37.00:0	+
19_11040127_T/C	19	11040127	C	ENSG00000142444	ENST00000270502	Transcript	NON_SYNONYMOUS_CODING	607	532	178	R/W	Cgg/Tgg	-	ENSP=ENSP00000270502;PolyPhen=benign(0);SIFT=tolerated(0.67);HGNC=C19orf52	T	C/C,T/T	C	C	C	A/A,H/H	.	1.0	CpG	0.864	0.013	0.908	510	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=C;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=0.864;HRun=2;HaplotypeScore=0.9958;MQ=36.74;MQ0=0;Map20=1;OAnc=C;QD=38.77;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=510;mSC=0.013;pSC=0.908	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1545,117,0:0,0:21,18:0,0:0,0:0:36.74:0;0/0:24:72.23:0,72,932:0,0:0,0:0,0:10,14:0:37.00:0	+
19_11491606_C/G	19	11491606	G	ENSG00000187266	ENST00000222139	Transcript	NON_SYNONYMOUS_CODING	916	781	261	L/V	Ctc/Gtc	-	ENSP=ENSP00000222139;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=EPOR	C	C/C,G/G	G	G	G	H/H,A/A	.	1	.	3.18	1.000	0.950	729	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=61;GAnc=G;GRP=3.18;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=729;mSC=1.000;pSC=0.950	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,126,1660:0,0:20,22:0,0:0,0:0:37.00:0;1/1:19:57.18:741,57,0:0,0:0,0:10,9:0,0:0:37.00:0	-
19_11559907_A/G	19	11559907	G	ENSG00000130175	ENST00000252455	Transcript	NON_SYNONYMOUS_CODING	1693	1357	453	V/I	Gtt/Att	-	ENSP=ENSP00000252455;PolyPhen=benign(0.001);SIFT=tolerated(0.5);HGNC=PRKCSH	A	G/G,G/G	G	G	-	A/A,A/A	rs34351170	0.99	.	4.89	0.866	0.036	814	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.01;CAnc=G;DP=63;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=4.89;HRun=2;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;QD=38.91;TS=HPGMC;TSseq=A,G,G,G,G;UR;bSC=814;mSC=0.866;pSC=0.036	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1551,117,0:0,0:0,0:18,21:0,0:0:37.00:0;1/1:24:72.23:952,72,0:0,0:0,0:12,12:0,0:0:37.00:0	+
19_12790506_C/G	19	12790506	G	ENSG00000095059	ENST00000210060	Transcript	NON_SYNONYMOUS_CODING	619	522	174	D/E	gaC/gaG	-	ENSP=ENSP00000210060;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=DHPS	C	G/G,G/G	G	G	G	A/A,A/A	rs10425108	0.96	.	1.99	1.000	0.782	509	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.01;AN=4;CAnc=G;DP=85;Dels=0.00;FS=0.000;GAnc=G;GRP=1.99;HRun=0;HaplotypeScore=0.0000;MQ=36.60;MQ0=0;Map20=1;OAnc=G;QD=37.79;TS=HPGOMC;TSseq=C,G,G,G,G,A;UR;bSC=509;mSC=1.000;pSC=0.782	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1923,147,0:0,1:0,0:22,27:0,0:0:36.60:0;1/1:35:99:1389,105,0:0,0:0,0:14,21:0,0:0:37.00:0	-
19_12921186_T/C	19	12921186	C	ENSG00000104889	ENST00000221486	Transcript	NON_SYNONYMOUS_CODING	665	605	202	S/L	tCg/tTg	-	ENSP=ENSP00000221486;PolyPhen=benign(0.019);SIFT=tolerated(0.74);HGNC=RNASEH2A	T	T/T,C/C	C	C	C	H/H,A/A	rs7247284	0.94	CpG	2	0.007	0.580	571	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.16;AMR_AF=0.06;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=78;EUR_AF=0.03;GAnc=C;GRP=2;HRun=0;MQ=39.29;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,T;bSC=571;mSC=0.007;pSC=0.580	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:51:99:0,153,2000:0,0:0,0:0,0:25,26:0:39.29:0;1/1:27:81.27:1080,81,0:0,0:14,13:0,0:0,0:0:37.00:0	+
19_12936617_C/G	19	12936617	G	ENSG00000132026	ENST00000322912	Transcript	NON_SYNONYMOUS_CODING	1007	689	230	A/G	gCc/gGc	-	ENSP=ENSP00000326253;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=RTBDN	C	C/C,G/G	G	G	G	H/H,A/A	rs13628	0.93	.	1.18	0.006	0.083	560	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.14;AMR_AF=0.07;AN=4;ASN_AF=0.03;CAnc=G;DP=50;EUR_AF=0.04;GAnc=G;GRP=1.18;HRun=2;MQ=37.90;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=560;mSC=0.006;pSC=0.083	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:99:0,99,1285:0,0:19,13:0,0:0,0:0:37.90:0;1/1:17:51.16:658,51,0:0,0:0,0:14,3:0,0:0:37.00:0	-
19_14168198_C/G	19	14168198	G	ENSG00000187867	ENST00000340790	Transcript	NON_SYNONYMOUS_CODING	91	91	31	L/V	Ctg/Gtg	-	ENSP=ENSP00000344996;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PALM3	C	G/C,C/C	G	G	G	A/H,H/H	rs113734346	0.99	.	3.44	.	.	894	1	1000gALT=G;AC=1;AF=0.25;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;BaseQRankSum=0.800;CAnc=G;DP=41;Dels=0.00;FS=5.969;GAnc=G;GRP=3.44;HRun=0;HaplotypeScore=1.9664;MQ=37.00;MQ0=0;MQRankSum=-0.329;Map20=1;OAnc=G;QD=11.20;ReadPosRankSum=1.035;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=894	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:28:99:343,0,565:0,0:8,8:2,8:0,0:0:37.00:0;0/0:13:39.13:0,39,520:0,0:6,7:0,0:0,0:0:37.00:0	-
19_14810034_G/A	19	14810034	A	ENSG00000160961	ENST00000292530	Transcript	NON_SYNONYMOUS_CODING	338	247	83	K/E	Aaa/Gaa	-	ENSP=ENSP00000292530;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZNF333	G	G/G,A/A	A	-	A	H/H,A/A	.	1	CpG	-0.773	0.000	0.274	.	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=95;GRP=-0.773;HRun=2;MQ=39.69;MQ0=0;Map20=1;OAnc=A;TS=HPOM;TSseq=G,A,A,A;mSC=0.000;pSC=0.274	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:54:82.48:0,82,1915:1,1:0,0:18,34:0,0:0:39.69:0;1/1:41:99:1632,123,0:16,25:0,0:0,0:0,0:0:37.00:0	+
19_15480981_G/A	19	15480981	A	ENSG00000105127	ENST00000269701	Transcript	NON_SYNONYMOUS_CODING	1109	1048	350	F/L	Ttc/Ctc	-	ENSP=ENSP00000269701;PolyPhen=benign(0);SIFT=tolerated(0.84);HGNC=AKAP8	G	A/A,A/A	A	A	A	A/A,A/A	rs34063092	0.98	.	0.598	0.000	0.065	551	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=A;DP=64;Dels=0.00;FS=0.000;GAnc=A;GRP=0.598;HRun;HaplotypeScore=3.9989;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=39.08;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=551;mSC=0.000;pSC=0.065	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1557,117,0:25,14:0,0:0,0:0,0:0:37.00:0;1/1:25:75.24:984,75,0:13,12:0,0:0,0:0,0:0:37.00:0	-
19_17918636_G/T	19	17918636	T	ENSG00000179913	ENST00000318683	Transcript	NON_SYNONYMOUS_CODING	167	20	7	L/R	cTg/cGg	-	ENSP=ENSP00000321874;PolyPhen=benign(0);SIFT=tolerated(0.31);HGNC=B3GNT3	G	G/G,T/T	T	T	T	H/H,A/A	.	1	CpG	-4.89	.	0.199	976	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=54;GAnc=T;GRP=-4.89;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=976;pSC=0.199	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:34:99:0,99,1312:0,1:0,0:13,20:0,0:0:37.00:0;1/1:20:60.20:800,60,0:0,0:0,0:0,0:10,10:0:37.00:0	+
19_19135502_A/G	19	19135502	G	ENSG00000064607	ENST00000330854	Transcript	NON_SYNONYMOUS_CODING	1720	1655	552	T/M	aCg/aTg	-	ENSP=ENSP00000332373;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SUGP2	A	G/G,A/A	G	G	G	A/A,H/H	rs10404860	0.96	CpG	-0.557	0.000	0.712	693	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.17;AMR_AF=0.02;AN=4;BaseQRankSum=1.575;CAnc=G;CpG;DP=74;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.557;HRun=0;HaplotypeScore=7.9309;MQ=38.96;MQ0=0;MQRankSum=-0.315;Map20=1;OAnc=G;QD=36.44;ReadPosRankSum=0.709;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=693;mSC=0.000;pSC=0.712	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:98.99:1673,99,0:0,1:0,0:20,23:0,1:0:38.96:0;0/0:29:87.29:0,87,1155:11,18:0,0:0,0:0,0:0:37.00:0	-
19_35757853_G/A	19	35757853	A	ENSG00000105699	ENST00000347609	Transcript	NON_SYNONYMOUS_CODING	1097	1097	366	N/S	aAt/aGt	-	ENSP=ENSP00000262627;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LSR	G	G/G,A/A	A	A	A	H/H,A/A	.	1	.	3.38	0.682	0.812	663	1	AC=2;AF=0.50;AN=4;CAnc=A;DP=58;GAnc=A;GRP=3.38;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=663;mSC=0.682;pSC=0.812	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:77.37:0,77,1453:0,1:0,0:22,15:0,0:0:37.00:0;1/1:19:57.19:760,57,0:8,11:0,0:0,0:0,0:0:37.00:0	+
19_35899217_G/C	19	35899217	C	ENSG00000205786	ENST00000536898	Transcript	NON_SYNONYMOUS_CODING	1806	568	190	L/V	Ctc/Gtc	-	ENSP=ENSP00000437610;PolyPhen=benign(0.005);SIFT=tolerated(0.58)	G	G/G,C/C	C	C	C	H/H,A/A	rs112268455	0.91	RM	-0.95	0.037	0.037	873	0.5	1000gALT=C;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.13;AMR_AF=0.10;AN=4;CAnc=C;DP=65;EUR_AF=0.13;GAnc=C;GRP=-0.95;HRun=0;MQ=36.99;MQ0=0;Map20=0.5;OAnc=C;RM;TS=HPGOMC;TSseq=G,C,C,C,C,-;UR;bSC=873;mSC=0.037;pSC=0.037	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:96.27:0,96,1222:0,0:0,0:13,17:0,0:0:36.99:0;1/1:32:93.29:1217,93,0:0,0:11,21:0,0:0,0:0:36.47:0	+
19_36298022_T/C	19	36298022	C	ENSG00000250799	ENST00000301175	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	845	827	276	S/N	aGc/aAc	-	ENSP=ENSP00000301175;PolyPhen=benign(0.006);SIFT=tolerated(0.66);HGNC=PRODH2	T	C/C,T/T	C	C	C	A/A,H/H	rs73594420	0.91	.	-5.04	0.000	0.278	680	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.35;AMR_AF=0.04;AN=4;ASN_AF=0.02;CAnc=C;DP=61;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-5.04;HRun=0;HaplotypeScore=1.9971;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.58;TS=HPGOC;TSseq=T,C,C,C,C;UR;bSC=680;mSC=0.000;pSC=0.278	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1615,123,0:0,0:29,12:0,0:0,0:0:37.00:0;0/0:20:60.20:0,60,794:0,0:0,0:0,0:11,9:0:37.00:0	-
19_36330277_C/G	19	36330277	G	ENSG00000161270	ENST00000353632	Transcript	NON_SYNONYMOUS_CODING	3127	2971	991	L/V	Cta/Gta	-	ENSP=ENSP00000343634;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=NPHS1	C	G/G,G/G	G	G	G	A/A,A/A	rs34736717	0.96	CpG	1.08	0.989	0.838	740	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.18;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=79;Dels=0.00;FS=0.000;GAnc=G;GRP=1.08;HRun;HaplotypeScore=0.0000;MQ=37.59;MQ0=0;Map20=1;OAnc=G;QD=39.45;TS=HPGOC;TSseq=C,G,G,G,G;UR;bSC=740;mSC=0.989;pSC=0.838	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:2045,154,0:0,0:0,0:25,26:0,0:0:37.59:0;1/1:28:84.26:1091,84,0:0,0:0,0:13,15:0,0:0:37.00:0	-
19_39421274_T/C	19	39421274	C	ENSG00000104835	ENST00000221431	Transcript	NON_SYNONYMOUS_CODING	263	103	35	A/T	Gct/Act	-	ENSP=ENSP00000221431;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SARS2	T	C/C,C/C	C	C	C	A/A,A/A	rs34264048	0.94	CpG	4.31	.	0.289	675	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.24;AMR_AF=0.04;AN=4;BaseQRankSum=0.211;CAnc=C;CpG;DP=62;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=4.31;HRun=0;HaplotypeScore=0.0000;MQ=37.73;MQ0=0;MQRankSum=-1.141;Map20=1;OAnc=C;QD=37.36;ReadPosRankSum=-1.733;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=675;pSC=0.289	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:83.40:1565,83,0:0,0:14,26:0,0:0,1:0:37.73:0;1/1:21:63.20:818,63,0:0,0:10,11:0,0:0,0:0:37.00:0	-
19_40421408_T/G	19	40421408	G	ENSG00000090920	ENST00000221347	Transcript	NON_SYNONYMOUS_CODING	2521	2513	838	T/K	aCg/aAg	-	ENSP=ENSP00000221347;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FCGBP	T	G/G,G/G	G	G	G	A/A,A/A	rs34873737	0.98	CpG	2.43	.	0.096	794	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.02;AN=4;CAnc=G;CpG;DP=48;Dels=0.00;FS=0.000;GAnc=G;GRP=2.43;HRun=0;HaplotypeScore=2.9827;MQ=37.81;MQ0=0;Map20=1;OAnc=G;QD=36.59;TS=HPGOM;TSseq=T,G,G,G,G;bSC=794;pSC=0.096	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1387,108,0:0,1:0,0:16,20:0,0:0:37.81:0;1/1:11:33.11:440,33,0:0,0:0,0:5,6:0,0:0:37.00:0	-
19_42747229_G/A	19	42747229	A	ENSG00000204957	ENST00000378108	Transcript	NON_SYNONYMOUS_CODING	303	227	76	K/R	aAg/aGg	-	ENSP=ENSP00000367348;PolyPhen=unknown(0)	G	A/A,A/A	A	A	A	A/A,A/A	rs11878620	0.91	.	3.3	0.011	0.034	516	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.19;AMR_AF=0.10;AN=4;ASN_AF=0.04;CAnc=A;DP=92;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=A;GRP=3.3;HRun;HaplotypeScore=2.9995;MQ=39.02;MQ0=0;Map20=1;OAnc=A;QD=36.23;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=516;mSC=0.011;pSC=0.034	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2134,166,0:26,30:0,0:0,0:0,0:0:39.02:0;1/1:34:99:1286,99,0:15,19:0,0:0,0:0,0:0:37.00:0	+
19_42931004_A/G	19	42931004	G	ENSG00000079435	ENST00000244289	Transcript	NON_SYNONYMOUS_CODING	575	298	100	H/Y	Cac/Tac	-	ENSP=ENSP00000244289;PolyPhen=benign(0);SIFT=tolerated(0.54);HGNC=LIPE	A	G/G,G/G	G	G	G	A/A,A/A	rs16975750	0.93	.	-1.76	.	0.439	740	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.28;AMR_AF=0.04;AN=4;BaseQRankSum=-0.604;CAnc=G;DP=64;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.76;HRun=0;HaplotypeScore=0.0000;MQ=37.69;MQ0=0;MQRankSum=-0.685;Map20=1;OAnc=G;QD=36.34;ReadPosRankSum=-0.685;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=740;pSC=0.439	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.41:1596,89,0:0,1:0,0:21,21:0,0:0:37.69:0;1/1:21:63.20:828,63,0:0,0:0,0:6,15:0,0:0:37.00:0	-
19_44470189_T/A	19	44470189	A	ENSG00000159905	ENST00000251269	Transcript	NON_SYNONYMOUS_CODING	863	535	179	F/I	Ttc/Atc	-	ENSP=ENSP00000251269;PolyPhen=benign(0.051);SIFT=deleterious(0.01);HGNC=ZNF221	A	A/A,T/T	T	T	T	H/H,A/A	rs454301	0.95	.	1.55	0.000	.	900	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.95;AFR_AF=0.80;AMR_AF=0.97;AN=4;ASN_AF=1.00;CAnc=T;DP=94;Dels=0.00;EUR_AF=1.00;FS=0.000;GAnc=T;GRP=1.55;HRun=0;HaplotypeScore=0.0000;MQ=37.46;MQ0=0;Map20=1;OAnc=T;QD=36.91;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=900;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2432,187,0:31,34:0,0:0,0:0,0:0:37.46:0;0/0:29:87.27:0,87,1134:0,0:0,0:0,0:16,13:0:37.00:0	+
19_47823038_G/A	19	47823038	A	ENSG00000197405	ENST00000355085	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	53	4	2	D/N	Gac/Aac	-	ENSP=ENSP00000347197;PolyPhen=benign(0.432);SIFT=tolerated(0.22);HGNC=C5AR1	A	G/G,G/G	G	G	-	A/A,A/A	rs4467185	0.97	.	1.67	0.037	0.036	912	1	1000gALT=A;AC=0;AF=0.00;AF1000g=0.97;AFR_AF=0.94;AMR_AF=0.97;AN=4;ASN_AF=1.00;CAnc=G;DP=62;EUR_AF=0.98;GAnc=G;GRP=1.67;MQ=38.55;MQ0=0;Map20=1;TS=HPG;TSseq=G,G,G;bSC=912;mSC=0.037;pSC=0.036	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,114,1511:0,0:0,0:20,18:0,0:0:38.55:0;0/0:24:72.22:0,72,944:0,0:0,0:10,14:0,0:0:37.00:0	+
19_47823871_G/T	19	47823871	T	ENSG00000197405	ENST00000355085	Transcript	NON_SYNONYMOUS_CODING	886	837	279	K/N	aaG/aaT	-	ENSP=ENSP00000347197;PolyPhen=benign(0.07);SIFT=tolerated(0.44);HGNC=C5AR1	T	G/G,G/G	G	G	-	A/A,A/A	rs11880097	0.97	.	-9.75	0.000	0.064	912	1	1000gALT=T;AC=0;AF=0.00;AF1000g=0.97;AFR_AF=0.94;AMR_AF=0.97;AN=4;ASN_AF=1.00;CAnc=G;DP=78;EUR_AF=0.98;GAnc=G;GRP=-9.75;MQ=39.69;MQ0=0;Map20=1;TS=HPGM;TSseq=G,N,G,G;bSC=912;mSC=0.000;pSC=0.064	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:54:99:0,163,2146:0,0:0,0:26,28:0,0:0:39.69:0;0/0:24:72.22:0,72,939:0,0:0,0:10,14:0,0:0:37.00:0	+
19_49001600_A/G	19	49001600	G	ENSG00000142235	ENST00000270238	Transcript	NON_SYNONYMOUS_CODING	2813	2813	938	A/V	gCc/gTc	-	ENSP=ENSP00000270238;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=LMTK3	A	G/G,G/G	G	G	G	A/A,A/A	rs61745738	0.92	.	-0.00579	0.552	.	729	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.22;AMR_AF=0.08;AN=4;ASN_AF=0.01;CAnc=G;DP=52;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=G;GRP=-0.00579;HRun=2;HaplotypeScore=0.9832;MQ=37.79;MQ0=0;Map20=1;OAnc=G;QD=38.23;TS=HPGOMC;TSseq=A,G,G,G,N,G;bSC=729;mSC=0.552	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1486,114,0:0,0:0,0:18,19:0,0:0:37.79:0;1/1:14:39.13:512,39,0:0,0:0,0:5,9:0,0:0:37.00:0	-
19_49377918_G/T	19	49377918	T	ENSG00000087074	ENST00000200453	Transcript	NON_SYNONYMOUS_CODING	1697	1428	476	S/R	agT/agG	-	ENSP=ENSP00000200453;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PPP1R15A	G	T/T,T/T	T	T	T	A/A,A/A	rs35087747	0.91	.	-5.56	.	0.059	783	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.09;AMR_AF=0.08;AN=4;BaseQRankSum=-1.211;CAnc=T;DP=63;Dels=0.00;EUR_AF=0.16;FS=3.056;GAnc=T;GRP=-5.56;HRun=0;HaplotypeScore=0.9997;MQ=37.68;MQ0=0;MQRankSum=0.797;Map20=1;OAnc=T;QD=33.56;ReadPosRankSum=1.979;TS=HPGOMC;TSseq=G,T,T,T,T,T;bSC=783;pSC=0.059	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:46.40:1510,46,0:0,0:0,0:1,1:31,11:0:37.68:0;1/1:19:57.19:750,57,0:0,0:0,0:0,0:7,12:0:37.00:0	+
19_49378875_G/A	19	49378875	A	ENSG00000087074	ENST00000200453	Transcript	NON_SYNONYMOUS_CODING	1939	1670	557	H/R	cAc/cGc	-	ENSP=ENSP00000200453;PolyPhen=benign(0.002);SIFT=tolerated(0.76);HGNC=PPP1R15A	G	A/A,G/G	A	A	A	A/A,H/H	rs77919834	0.99	CpG	-2.76	.	0.051	783	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.06;AMR_AF=0.01;AN=4;CAnc=A;CpG;DP=52;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.76;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=36.38;TS=HPGOMC;TSseq=G,A,A,A,A,G;bSC=783;pSC=0.051	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:96.31:1270,96,0:17,17:0,0:0,0:0,0:0:37.00:0;0/0:18:54.17:0,54,710:0,0:0,0:9,9:0,0:0:37.00:0	+
19_49387211_T/C	19	49387211	C	ENSG00000104804	ENST00000221399	Transcript	NON_SYNONYMOUS_CODING	1299	1154	385	R/Q	cGg/cAg	-	ENSP=ENSP00000221399;PolyPhen=benign(0.016);SIFT=tolerated(0.1);HGNC=TULP2	T	T/T,C/C	C	C	C	H/H,A/A	.	1	CpG	3.52	.	0.949	778	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=74;GAnc=C;GRP=3.52;HRun=2;MQ=38.26;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,-,C;bSC=778;pSC=0.949	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,138,1833:0,0:0,0:0,0:21,26:0:38.26:0;1/1:27:81.26:1049,81,0:0,0:10,17:0,0:0,0:0:36.63:0	-
19_49671207_G/A	19	49671207	A	ENSG00000130529	ENST00000252826	Transcript	NON_SYNONYMOUS_CODING	373	301	101	T/A	Aca/Gca	-	ENSP=ENSP00000252826;PolyPhen=benign(0.001);SIFT=tolerated(0.8);HGNC=TRPM4	G	A/A,A/A	A	A	A	A/A,A/A	rs113984787	0.99	.	2.27	.	0.919	.	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=A;DP=70;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=2.27;HRun=0;HaplotypeScore=0.0000;MQ=37.56;MQ0=0;Map20=1;OAnc=A;QD=36.78;TS=HPGOMC;TSseq=G,A,A,A,A,A;pSC=0.919	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1688,129,0:20,24:0,0:0,0:0,0:0:37.56:0;1/1:25:75.24:980,75,0:13,12:0,0:0,0:0,0:0:37.00:0	+
19_50436252_A/G	19	50436252	G	ENSG00000169136	ENST00000423777	Transcript	NON_SYNONYMOUS_CODING	1319	752	251	R/K	aGg/aAg	-	ENSP=ENSP00000396954;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ATF5	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	2.98	0.072	0.764	799	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=74;GAnc=G;GRP=2.98;HRun=2;MQ=37.58;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,-,G,G;bSC=799;mSC=0.072;pSC=0.764	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:52:99:0,154,2037:32,19:0,0:0,0:0,0:0:37.58:0;1/1:22:66.19:849,66,0:0,0:0,0:9,13:0,0:0:36.54:0	+
19_50735310_G/C	19	50735310	C	ENSG00000105357	ENST00000262269	Transcript	NON_SYNONYMOUS_CODING	1104	1097	366	T/S	aCc/aGc	-	ENSP=ENSP00000262269;PolyPhen=benign(0);SIFT=tolerated(0.76);HGNC=MYH14	G	G/G,C/C	C	C	C	H/H,A/A	.	1	.	0.577	0.000	0.929	917	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=70;GAnc=C;GRP=0.577;HRun=2;MQ=37.00;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=917;mSC=0.000;pSC=0.929	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,126,1642:0,0:0,0:25,17:0,0:0:37.00:0;1/1:28:84.28:1119,84,0:0,0:16,12:0,0:0,0:0:37.00:0	+
19_51503966_T/A	19	51503966	A	ENSG00000129455	ENST00000391806	Transcript	NON_SYNONYMOUS_CODING	258	79	27	C/S	Tgc/Agc	-	ENSP=ENSP00000375682;PolyPhen=benign(0.016);SIFT=tolerated(0.73);HGNC=KLK8	T	T/T,A/A	A	A	A	H/H,A/A	rs112716660	1.0	.	-5.65	0.000	0.012	910	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=A;DP=75;GAnc=A;GRP=-5.65;HRun=0;MQ=37.62;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=T,A,A,A,A,G;bSC=910;mSC=0.000;pSC=0.012	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,144,1914:0,0:0,0:0,0:23,24:0:37.62:0;1/1:27:81.27:1078,81,0:10,17:0,0:0,0:0,0:0:37.00:0	-
19_53612855_T/G	19	53612855	G	ENSG00000170954	ENST00000243643	Transcript	NON_SYNONYMOUS_CODING	547	443	148	P/H	cCt/cAt	-	ENSP=ENSP00000243643;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZNF415	T	T/T,G/G	G	G	G	H/H,A/A	rs16984466	0.93	.	0.201	0.002	0.324	.	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.07;AFR_AF=0.27;AMR_AF=0.03;AN=4;CAnc=G;DP=94;GAnc=G;GRP=0.201;HRun=4;MQ=37.98;MQ0=0;Map20=1;OAnc=G;TS=HPGOM;TSseq=T,G,G,G,G;mSC=0.002;pSC=0.324	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:61:99:0,181,2362:0,0:0,0:0,0:29,30:0:37.98:0;1/1:33:99:1296,99,0:0,0:0,0:17,16:0,0:0:37.00:0	-
19_55087490_T/C	19	55087490	C	ENSG00000239998	ENST00000251376	Transcript	NON_SYNONYMOUS_CODING	1256	1169	390	A/V	gCg/gTg	-	ENSP=ENSP00000251376;PolyPhen=benign(0.001);SIFT=tolerated(0.7);HGNC=LILRA2	T	C/T,C/T	C	-	C	A/H,A/H	rs75028967	0.97	CpG	-3.1	0.000	0.033	.	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.11;AN=4;BaseQRankSum=1.492;CAnc=C;CpG;DP=92;Dels=0.00;FS=6.266;GRP=-3.1;HRun=0;HaplotypeScore=1.6648;MQ=34.95;MQ0=2;MQRankSum=-2.123;Map20=1;OAnc=C;QD=5.33;ReadPosRankSum=0.350;TS=HPO;TSseq=T,C,C;mSC=0.000;pSC=0.033	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:61:99:355,0,1521:0,0:12,5:0,0:24,19:0:34.95:1;0/1:31:99:256,0,699:0,0:3,8:0,0:9,11:0:34.67:1	+
19_55671355_C/T	19	55671355	T	ENSG00000167646	ENST00000301249	Transcript	NON_SYNONYMOUS_CODING	1276	1276	426	I/V	Atc/Gtc	-	ENSP=ENSP00000301249;PolyPhen=benign(0.007);SIFT=tolerated(0.37);HGNC=DNAAF3	C	T/C,C/C	T	-	T	A/H,H/H	.	1	CpG	-2.94	0.066	0.875	.	1	AC=1;AF=0.25;AN=4;BaseQRankSum=0.284;CAnc=T;CpG;DP=68;Dels=0.00;FS=1.199;GRP=-2.94;HRun=0;HaplotypeScore=0.0000;MQ=37.64;MQ0=0;MQRankSum=0.353;Map20=1;OAnc=T;QD=14.23;ReadPosRankSum=0.171;TS=HPOC;TSseq=C,T,T,T;mSC=0.066;pSC=0.875	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:47:99:699,0,823:0,0:10,14:0,0:9,14:0:37.64:0;0/0:21:60.19:0,60,786:0,0:9,12:0,0:0,0:0:37.00:0	-
19_55708649_C/T	19	55708649	T	ENSG00000080031	ENST00000263434	Transcript	NON_SYNONYMOUS_CODING	1365	1292	431	Q/R	cAg/cGg	-	ENSP=ENSP00000263434;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=PTPRH	C	C/C,T/T	T	-	T	H/H,A/A	.	1	CpG	-0.545	0.000	0.207	889	1	AC=2;AF=0.50;AN=4;CAnc=T;CpG;DP=63;GRP=-0.545;HRun=0;MQ=39.25;MQ0=0;Map20=1;OAnc=T;TS=HPOC;TSseq=C,T,T,T;bSC=889;mSC=0.000;pSC=0.207	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:99:0,111,1455:0,0:21,17:0,0:0,0:0:39.25:0;1/1:24:72.23:939,72,0:0,0:0,0:0,0:15,9:0:37.00:0	-
19_57955729_G/A	19	57955729	A	ENSG00000186230	ENST00000334181	Transcript	NON_SYNONYMOUS_CODING	1463	1213	405	T/A	Act/Gct	-	ENSP=ENSP00000333980;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZNF749	G	A/A,A/A	A	A	-	A/A,A/A	rs2240038	0.97	RM	0.575	0.030	0.494	976	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.09;AMR_AF=0.02;AN=4;ASN_AF=0.01;BaseQRankSum=-1.039;CAnc=A;DP=87;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=0.575;HRun=0;HaplotypeScore=1.9995;MQ=41.08;MQ0=0;MQRankSum=1.228;Map20=1;QD=35.60;RM;ReadPosRankSum=-1.732;TS=HPG;TSseq=G,A,-;UR;bSC=976;mSC=0.030;pSC=0.494	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2027,120,0:27,28:0,0:0,1:0,0:0:41.08:0;1/1:31:93.30:1228,93,0:16,15:0,0:0,0:0,0:0:37.00:0	+
19_58565187_A/G	19	58565187	G	ENSG00000152467	ENST00000282326	Transcript	NON_SYNONYMOUS_CODING	1242	995	332	S/N	aGc/aAc	-	ENSP=ENSP00000282326;PolyPhen=benign(0);SIFT=tolerated(0.62);HGNC=ZSCAN1	A	A/A,G/G	G	-	G	H/H,A/A	.	1	.	0.194	0.000	0.320	.	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=84;GRP=0.194;HRun=0;MQ=38.77;MQ0=0;Map20=1;OAnc=G;TS=HPOM;TSseq=A,G,G,G;mSC=0.000;pSC=0.320	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:50:99:0,147,1919:30,20:0,0:0,0:0,0:0:38.77:0;1/1:34:99:1333,102,0:0,0:0,0:22,12:0,0:0:37.00:0	+
20_2552884_A/G	20	2552884	G	ENSG00000149488	ENST00000358864	Transcript	NON_SYNONYMOUS_CODING	629	614	205	R/Q	cGa/cAa	-	ENSP=ENSP00000351732;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TMC2	A	A/A,G/G	G	G	G	H/H,A/A	rs11908093	0.91	CpG	0.0895	0.000	0.678	862	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.20;AMR_AF=0.04;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=72;EUR_AF=0.11;GAnc=G;GRP=0.0895;HRun=0;MQ=38.32;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=862;mSC=0.000;pSC=0.678	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,135,1781:30,15:0,0:0,0:0,0:0:38.32:0;1/1:27:81.26:1061,81,0:0,0:0,0:12,15:0,0:0:37.42:0	+
20_3577062_G/A	20	3577062	A	ENSG00000088812	ENST00000262919	Transcript	NON_SYNONYMOUS_CODING	3523	3455	1152	K/R	aAa/aGa	-	ENSP=ENSP00000262919;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ATRN	G	A/A,G/G	A	A	A	A/A,H/H	rs3886999	0.98	.	5.97	1.000	0.890	581	0.5	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AMR_AF=0.04;AN=4;CAnc=A;DP=97;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=A;GRP=5.97;HRun;HaplotypeScore=0.0000;MQ=37.90;MQ0=0;Map20=0.5;OAnc=A;QD=36.73;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=581;mSC=1.000;pSC=0.890	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:66:99:2457,190,0:37,28:0,0:0,0:0,0:0:37.90:0;0/0:31:90.29:0,90,1175:0,0:0,0:16,14:0,1:0:37.00:0	+
20_17595470_C/T	20	17595470	T	ENSG00000125844	ENST00000246043	Transcript	NON_SYNONYMOUS_CODING	4106	4106	1369	K/R	aAa/aGa	-	ENSP=ENSP00000246043;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RRBP1	C	C/C,T/T	T	T	T	H/H,A/A	rs2229887	0.99	.	4.35	0.992	0.157	829	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=T;DP=58;GAnc=T;GRP=4.35;HRun;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=829;mSC=0.992;pSC=0.157	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:99:0,129,1666:0,0:23,20:0,0:0,0:0:37.00:0;1/1:15:45.14:591,45,0:0,0:0,0:0,0:6,9:0:37.00:0	-
20_20616052_G/A	20	20616052	A	ENSG00000188559	ENST00000424490	Transcript	NON_SYNONYMOUS_CODING	930	571	191	S/P	Tca/Cca	-	ENSP=ENSP00000404910;PolyPhen=benign(0);SIFT=tolerated(0.4);HGNC=RALGAPA2	G	A/A,A/A	A	A	A	A/A,A/A	rs16982059	0.99	.	-3.36	0.000	0.058	457	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=A;DP=74;Dels=0.00;FS=0.000;GAnc=A;GRP=-3.36;HRun;HaplotypeScore=0.9997;MQ=37.68;MQ0=0;Map20=1;OAnc=A;QD=37.57;TS=HPGOMC;TSseq=G,A,A,A,A,A;UR;bSC=457;mSC=0.000;pSC=0.058	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1686,129,0:21,22:0,0:0,0:0,0:0:37.68:0;1/1:30:90.29:1182,90,0:16,14:0,0:0,0:0,0:0:37.00:0	-
20_23065122_T/C	20	23065122	C	ENSG00000125810	ENST00000246006	Transcript	NON_SYNONYMOUS_CODING	1856	1708	570	A/T	Gca/Aca	-	ENSP=ENSP00000246006;PolyPhen=benign(0);SIFT=tolerated(0.74);HGNC=CD93	T	T/T,C/C	C	-	C	H/H,A/A	rs34513402	1.0	CpG	-0.86	0.000	0.093	813	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;CpG;DP=71;GRP=-0.86;HRun=0;MQ=36.75;MQ0=0;Map20=1;OAnc=C;TS=HPOMC;TSseq=T,C,C,T,T;bSC=813;mSC=0.000;pSC=0.093	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:99:0,114,1494:0,0:0,0:0,1:16,23:1:36.75:0;1/1:31:50.24:1040,50,0:1,0:15,14:0,0:1,0:0:37.00:0	-
20_31984599_A/G	20	31984599	G	ENSG00000101391	ENST00000339269	Transcript	NON_SYNONYMOUS_CODING	426	272	91	T/M	aCg/aTg	-	ENSP=ENSP00000341840;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CDK5RAP1	A	A/A,G/G	G	-	G	H/H,A/A	rs35633148	0.98	CpG	2.4	0.177	0.483	491	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=76;GRP=2.4;HRun=0;MQ=39.83;MQ0=0;Map20=1;OAnc=G;TS=HPOMC;TSseq=A,G,G,G,A;bSC=491;mSC=0.177;pSC=0.483	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,123,1615:15,26:0,0:0,0:0,0:0:39.83:0;1/1:35:99:1358,105,0:0,0:0,0:21,14:0,0:0:37.00:0	-
20_33117686_A/G	20	33117686	G	ENSG00000125971	ENST00000300469	Transcript	NON_SYNONYMOUS_CODING	125	110	37	G/D	gGc/gAc	-	ENSP=ENSP00000300469;PolyPhen=probably_damaging(0.929);HGNC=DYNLRB1	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	1.13	0.003	0.301	106	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=67;GAnc=G;GRP=1.13;HRun;MQ=38.26;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=106;mSC=0.003;pSC=0.301	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,132,1668:20,23:0,0:1,0:0,0:0:38.26:0;1/1:20:60.19:779,60,0:0,0:0,0:8,12:0,0:0:37.00:0	+
20_33337529_A/C	20	33337529	C	ENSG00000198646	ENST00000359003	Transcript	NON_SYNONYMOUS_CODING	2810	2469	823	M/I	atG/atT	-	ENSP=ENSP00000351894;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NCOA6	A	C/C,C/C	C	C	C	A/A,A/A	.	1	.	4.77	1.000	0.809	42	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=79;Dels=0.00;FS=0.000;GAnc=C;GRP=4.77;HRun=0;HaplotypeScore=0.5784;MQ=37.60;MQ0=0;Map20=1;OAnc=C;QD=38.03;TS=HPGOMC;TSseq=A,C,C,C,C,C;bSC=42;mSC=1.000;pSC=0.809	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1934,147,0:0,0:22,28:0,0:0,0:0:37.60:0;1/1:29:81.26:1060,81,0:0,0:16,13:0,0:0,0:0:37.00:0	-
20_33981906_G/C	20	33981906	C	ENSG00000101019	ENST00000349714	Transcript	NON_SYNONYMOUS_CODING	118	118	40	G/R	Ggc/Cgc	-	ENSP=ENSP00000335364;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=UQCC	G	C/C,G/G	C	C	C	A/A,H/H	rs75909303	1.0	CpG	4.76	1.000	0.889	179	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.00;AFR_AF=0.02;AN=4;BaseQRankSum=-0.192;CAnc=C;CpG;DP=77;Dels=0.00;FS=0.000;GAnc=C;GRP=4.76;HRun;HaplotypeScore=1.9662;MQ=39.59;MQ0=0;MQRankSum=-0.192;Map20=1;OAnc=C;QD=37.26;ReadPosRankSum=0.038;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=179;mSC=1.000;pSC=0.889	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:95.43:1710,95,0:0,0:22,22:0,1:0,0:0:39.59:0;0/0:32:96.31:0,96,1254:0,0:0,0:17,15:0,0:0:37.00:0	-
20_37356971_A/G	20	37356971	G	ENSG00000101438	ENST00000217420	Transcript	NON_SYNONYMOUS_CODING	1530	1267	423	G/S	Ggc/Agc	-	ENSP=ENSP00000217420;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLC32A1	A	G/G,G/G	G	G	G	A/A,A/A	rs34517228	0.99	CpG	3.5	1.000	0.923	839	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=G;CpG;DP=51;Dels=0.00;FS=0.000;GAnc=G;GRP=3.5;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.56;TS=HPGOMC;TSseq=A,G,G,A,G,G;UR;bSC=839;mSC=1.000;pSC=0.923	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1310,102,0:0,0:0,0:12,21:0,0:0:37.00:0;1/1:17:51.16:664,51,0:0,0:0,0:7,10:0,0:0:37.00:0	+
20_40045231_G/C	20	40045231	C	ENSG00000124177	ENST00000373233	Transcript	NON_SYNONYMOUS_CODING	6661	6483	2161	Q/H	caG/caC	-	ENSP=ENSP00000362330;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CHD6	G	C/C,G/G	C	C	C	A/A,H/H	rs3817893	0.98	.	2.38	1.000	0.197	272	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.04;AMR_AF=0.02;AN=4;ASN_AF=0.03;CAnc=C;DP=75;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=2.38;HRun=0;HaplotypeScore=0.0000;MQ=38.14;MQ0=0;Map20=1;OAnc=C;QD=38.81;TS=HPGOMC;TSseq=G,C,C,C,C,C;UR;bSC=272;mSC=1.000;pSC=0.197	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2051,157,0:0,0:30,22:0,0:0,0:0:38.14:0;0/0:23:69.22:0,69,902:0,0:0,0:12,11:0,0:0:37.00:0	-
20_40049873_T/C	20	40049873	C	ENSG00000124177	ENST00000373233	Transcript	NON_SYNONYMOUS_CODING	5580	5402	1801	S/N	aGc/aAc	-	ENSP=ENSP00000362330;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CHD6	T	C/C,T/T	C	C	C	A/A,H/H	rs56144026	0.99	.	0.0754	0.007	0.192	273	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.03;BaseQRankSum=0.866;CAnc=C;DP=75;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=0.0754;HRun=0;HaplotypeScore=2.9787;MQ=37.45;MQ0=0;MQRankSum=0.866;Map20=1;OAnc=C;QD=36.81;ReadPosRankSum=1.260;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=273;mSC=0.007;pSC=0.192	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:92.42:1652,92,0:0,0:20,22:0,0:0,1:0:37.45:0;0/0:31:93.31:0,93,1236:0,0:0,0:0,0:14,17:0:37.00:0	-
20_43378919_T/C	20	43378919	C	ENSG00000124249	ENST00000372861	Transcript	NON_SYNONYMOUS_CODING	564	433	145	R/C	Cgc/Tgc	-	ENSP=ENSP00000361952;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=KCNK15	T	C/C,T/T	C	C	C	A/A,H/H	rs75424185	0.98	CpG	4.29	0.005	0.060	819	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.07;AN=4;CAnc=C;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=C;GRP=4.29;HRun=0;HaplotypeScore=1.3123;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=38.14;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=819;mSC=0.005;pSC=0.060	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1444,111,0:0,0:23,14:0,0:0,0:0:37.81:0;0/0:17:51.17:0,51,680:0,0:0,0:0,0:11,6:0:37.00:0	+
20_44002597_G/T	20	44002597	T	ENSG00000124251	ENST00000372726	Transcript	NON_SYNONYMOUS_CODING	980	823	275	N/H	Aat/Cat	-	ENSP=ENSP00000361811;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TP53TG5	G	T/T,T/T	T	T	T	A/A,A/A	rs2231628	1.0	.	-9.04	0.000	0.409	521	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-0.026;CAnc=T;DP=71;Dels=0.00;FS=6.887;GAnc=T;GRP=-9.04;HRun;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;MQRankSum=0.851;Map20=1;OAnc=T;QD=34.60;ReadPosRankSum=0.181;TS=HPGOMC;TSseq=G,T,T,T,T,T;UR;bSC=521;mSC=0.000;pSC=0.409	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:64.45:1728,64,0:0,0:0,0:2,0:21,26:0:37.00:0;1/1:22:66.22:880,66,0:0,0:0,0:0,0:11,11:0:37.00:0	-
20_44003932_A/G	20	44003932	G	ENSG00000124251	ENST00000372726	Transcript	NON_SYNONYMOUS_CODING	672	515	172	A/V	gCc/gTc	-	ENSP=ENSP00000361811;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TP53TG5	A	G/G,G/G	G	G	G	A/A,A/A	rs2231619	1.0	.	4.43	0.024	0.179	521	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=1.683;CAnc=G;DP=60;Dels=0.00;FS=0.000;GAnc=G;GRP=4.43;HRun=2;HaplotypeScore=4.8280;MQ=39.09;MQ0=0;MQRankSum=0.266;Map20=1;OAnc=G;QD=35.44;ReadPosRankSum=0.325;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=521;mSC=0.024;pSC=0.179	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:55.81:1521,56,0:1,1:0,0:20,20:0,0:0:39.09:0;1/1:18:54.17:704,54,0:0,0:0,0:10,8:0,0:0:37.00:0	-
20_44171455_T/C	20	44171455	C	ENSG00000101448	ENST00000336443	Transcript	NON_SYNONYMOUS_CODING	791	227	76	R/H	cGt/cAt	-	ENSP=ENSP00000338114;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPINLW1	T	C/C,C/C	C	C	C	A/A,A/A	rs2231838	0.93	CpG	4.41	0.231	0.061	548	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.16;AMR_AF=0.11;AN=4;ASN_AF=0.05;CAnc=C;CpG;DP=85;Dels=0.00;FS=0.000;GAnc=C;GRP=4.41;HRun=0;HaplotypeScore=0.0000;MQ=38.54;MQ0=0;Map20=1;OAnc=C;QD=38.23;TS=HPGOM;TSseq=T,C,C,C,C;UR;bSC=548;mSC=0.231;pSC=0.061	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1983,153,0:0,0:30,20:0,0:0,0:0:38.54:0;1/1:34:99:1283,99,0:0,1:15,18:0,0:0,0:0:37.00:0	-
20_45362399_A/G	20	45362399	G	ENSG00000197496	ENST00000359271	Transcript	NON_SYNONYMOUS_CODING	1802	1552	518	A/T	Gcc/Acc	-	ENSP=ENSP00000352216;PolyPhen=benign(0.001);SIFT=tolerated(0.93);HGNC=SLC2A10	A	G/G,G/G	G	G	G	A/A,A/A	rs6018008	0.98	.	-7.75	0.001	0.498	867	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=G;DP=63;Dels=0.00;FS=0.000;GAnc=G;GRP=-7.75;HRun=0;HaplotypeScore=0.9958;MQ=38.21;MQ0=0;Map20=1;OAnc=G;QD=38.62;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=867;mSC=0.001;pSC=0.498	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1462,111,0:0,0:0,0:19,18:0,0:0:38.21:0;1/1:26:78.25:1021,78,0:0,0:0,0:8,18:0,0:0:37.00:0	+
20_45362456_A/G	20	45362456	G	ENSG00000197496	ENST00000359271	Transcript	NON_SYNONYMOUS_CODING	1859	1609	537	V/I	Gtc/Atc	-	ENSP=ENSP00000352216;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLC2A10	A	G/G,A/A	G	G	G	A/A,H/H	rs7348121	0.98	.	1.8	0.083	0.413	867	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.01;AN=4;CAnc=G;DP=67;Dels=0.00;FS=0.000;GAnc=G;GRP=1.8;HRun;HaplotypeScore=0.9958;MQ=37.48;MQ0=0;Map20=1;OAnc=G;QD=38.77;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=867;mSC=0.083;pSC=0.413	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1661,126,0:0,0:0,0:28,14:0,0:0:37.48:0;0/0:25:75.21:0,75,947:9,16:0,0:0,0:0,0:1:37.00:0	+
20_45644897_T/C	20	45644897	C	ENSG00000064655	ENST00000317304	Transcript	NON_SYNONYMOUS_CODING	386	376	126	P/S	Cca/Tca	-	ENSP=ENSP00000321590;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=EYA2	T	C/C,T/T	C	C	C	A/A,H/H	rs115924568	0.99	.	3.88	0.934	0.987	919	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=C;DP=54;Dels=0.00;FS=0.000;GAnc=C;GRP=3.88;HRun=2;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;Map20=1;OAnc=C;QD=38.30;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=919;mSC=0.934;pSC=0.987	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1412,108,0:0,0:22,14:0,0:0,0:0:37.83:0;0/0:18:51.16:0,51,665:0,0:0,0:0,0:12,6:0:37.00:0	+
20_49557691_C/G	20	49557691	G	ENSG00000000419	ENST00000371582	Transcript	NON_SYNONYMOUS_CODING	582	550	184	P/A	Ccc/Gcc	-	ENSP=ENSP00000360638;PolyPhen=benign(0.002);SIFT=tolerated(0.32);HGNC=DPM1	C	C/C,G/G	G	G	G	H/H,A/A	rs189011599	1.0	RM	0.225	0.235	0.270	506	0	1000gALT=G;AC=2;AF=0.50;AF1000g=0.00;AN=4;CAnc=G;DP=61;GAnc=G;GRP=0.225;HRun=2;MQ=37.22;MQ0=0;Map20=0;OAnc=G;RM;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=506;mSC=0.235;pSC=0.270	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:40:99:0,120,1545:0,0:19,18:0,0:0,0:0:37.22:0;1/1:21:63.17:773,63,0:0,0:0,0:10,11:0,0:0:34.77:0	-
20_56191360_A/G	20	56191360	G	ENSG00000124256	ENST00000340462	Transcript	NON_SYNONYMOUS_CODING	480	199	67	R/C	Cgc/Tgc	-	ENSP=ENSP00000344954;PolyPhen=benign(0.001);SIFT=tolerated(0.44);HGNC=ZBP1	A	G/G,G/G	G	G	G	A/A,A/A	rs34055120	0.98	CpG	-7.27	0.000	0.433	970	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=64;Dels=0.00;FS=0.000;GAnc=G;GRP=-7.27;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.76;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=970;mSC=0.000;pSC=0.433	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1739,132,0:0,0:0,0:20,24:0,0:0:37.00:0;1/1:20:60.19:790,60,0:0,0:0,0:6,14:0,0:0:37.00:0	-
20_56227589_C/G	20	56227589	G	ENSG00000124225	ENST00000265626	Transcript	NON_SYNONYMOUS_CODING	437	234	78	D/E	gaC/gaG	-	ENSP=ENSP00000265626;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=PMEPA1	C	G/G,G/G	G	G	G	A/A,A/A	rs41314918	0.92	.	2.94	1.000	0.958	929	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.27;AMR_AF=0.04;AN=4;BaseQRankSum=-0.274;CAnc=G;DP=56;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=2.94;HRun;HaplotypeScore=5.9250;MQ=40.06;MQ0=0;MQRankSum=-1.094;Map20=1;OAnc=G;QD=35.50;ReadPosRankSum=0.456;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=929;mSC=1.000;pSC=0.958	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:71.35:1382,71,0:0,0:1,0:21,16:0,0:0:40.06:0;1/1:18:54.13:671,54,0:0,0:0,0:8,10:0,0:0:36.44:0	-
20_61945439_G/C	20	61945439	C	ENSG00000101203	ENST00000326996	Transcript	NON_SYNONYMOUS_CODING	2474	2374	792	P/A	Ccc/Gcc	-	ENSP=ENSP00000323077;PolyPhen=benign(0);SIFT=tolerated(0.42);HGNC=COL20A1	G	C/C,C/C	C	C	C	A/A,A/A	rs147670144	0.95	.	-0.153	.	0.240	934	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.08;AMR_AF=0.05;AN=4;ASN_AF=0.01;BaseQRankSum=1.636;CAnc=C;DP=54;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=C;GRP=-0.153;HRun=2;HaplotypeScore=0.9973;MQ=37.83;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=C;QD=37.10;ReadPosRankSum=-1.444;TS=HPGOMC;TSseq=G,C,C,C,-,C;bSC=934;pSC=0.240	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:76.80:1369,77,0:0,0:18,17:1,0:0,0:0:37.83:0;1/1:18:54.18:713,54,0:0,0:10,8:0,0:0,0:0:37.00:0	+
20_62194510_T/C	20	62194510	C	ENSG00000130589	ENST00000427522	Transcript	NON_SYNONYMOUS_CODING	4382	3958	1320	A/T	Gcc/Acc	-	ENSP=ENSP00000393257;PolyPhen=benign(0.002);SIFT=tolerated(1)	T	T/T,C/C	C	C	C	H/H,A/A	rs34980032	0.94	CpG	-3.67	.	0.309	873	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.06;AFR_AF=0.15;AMR_AF=0.04;AN=4;CAnc=C;CpG;DP=35;EUR_AF=0.05;GAnc=C;GRP=-3.67;HRun=0;MQ=36.60;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=873;pSC=0.309	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:25:38.26:0,38,901:0,0:0,0:0,1:11,13:0:36.60:0;1/1:10:30.09:382,30,0:0,0:5,5:0,0:0,0:0:37.00:0	-
20_62729893_C/T	20	62729893	T	ENSG00000125510	ENST00000336866	Transcript	NON_SYNONYMOUS_CODING	1218	854	285	V/A	gTc/gCc	-	ENSP=ENSP00000336843;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=OPRL1	C	C/C,T/T	T	T	T	H/H,A/A	.	1	.	-0.344	.	.	835	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=54;GAnc=T;GRP=-0.344;HRun=0;MQ=39.65;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,N,T,T,T,N;bSC=835	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:99:0,99,1288:0,0:12,20:0,0:0,0:0:39.65:0;1/1:21:63.20:820,63,0:0,0:0,0:0,0:11,10:0:37.00:0	+
20_62737568_T/C	20	62737568	C	ENSG00000125522	ENST00000369768	Transcript	NON_SYNONYMOUS_CODING	957	617	206	R/Q	cGg/cAg	-	ENSP=ENSP00000358783;PolyPhen=benign(0.001);SIFT=tolerated(0.41);HGNC=NPBWR2	T	T/T,C/C	C	C	C	H/H,A/A	rs4809401	0.91	CpG	0.669	0.000	.	840	1	1000gALT=C;AC=2;AF=0.50;AF1000g=0.09;AFR_AF=0.03;AMR_AF=0.10;AN=4;ASN_AF=0.08;CAnc=C;CpG;DP=70;EUR_AF=0.14;GAnc=C;GRP=0.669;HRun=2;MQ=38.32;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,T;bSC=840;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:45:99:0,129,1701:0,0:0,0:0,0:24,20:0:38.32:0;1/1:25:75.24:981,75,0:0,0:16,9:0,0:0,0:0:37.00:0	-
21_16339570_T/A	21	16339570	A	ENSG00000180530	ENST00000318948	Transcript	NON_SYNONYMOUS_CODING	1542	944	315	F/Y	tTc/tAc	-	ENSP=ENSP00000327213;PolyPhen=benign(0);SIFT=tolerated(0.93);HGNC=NRIP1	T	A/A,A/T	A	A	A	A/A,A/H	rs2228507	0.93	.	2.21	0.967	0.501	485	1	1000gALT=A;AC=3;AF=0.75;AF1000g=0.07;AFR_AF=0.02;AMR_AF=0.01;AN=4;ASN_AF=0.25;CAnc=A;DP=77;Dels=0.00;FS=0.000;GAnc=A;GRP=2.21;HRun=2;HaplotypeScore=2.9945;MQ=39.69;MQ0=0;Map20=1;OAnc=A;QD=38.16;TS=HPGOMC;TSseq=T,A,A,A,A,A;UR;bSC=485;mSC=0.967;pSC=0.501	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2094,162,0:24,29:0,0:0,0:0,0:0:39.69:0;0/1:23:99:371,0,397:4,7:0,0:0,0:5,7:0:37.00:0	-
21_19775921_T/C	21	19775921	C	ENSG00000154646	ENST00000284885	Transcript	NON_SYNONYMOUS_CODING	53	19	7	V/I	Gta/Ata	-	ENSP=ENSP00000284885;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TMPRSS15	T	C/C,T/T	C	C	-	A/A,H/H	.	1	CpG	1.57	0.000	0.130	920	1	AC=2;AF=0.50;AN=4;BaseQRankSum=1.543;CAnc=C;CpG;DP=86;Dels=0.00;FS=0.000;GAnc=C;GRP=1.57;HRun=0;HaplotypeScore=8.9366;MQ=39.09;MQ0=0;MQRankSum=1.102;Map20=1;QD=36.04;ReadPosRankSum=1.543;TS=HPGMC;TSseq=T,C,C,C,C;bSC=920;mSC=0.000;pSC=0.130	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2051,138,0:0,0:27,27:0,0:1,0:0:39.09:0;0/0:30:90.29:0,90,1190:0,0:0,0:0,0:14,16:0:37.00:0	-
21_30304877_A/G	21	30304877	G	ENSG00000198862	ENST00000361371	Transcript	NON_SYNONYMOUS_CODING	5136	4985	1662	T/I	aCa/aTa	-	ENSP=ENSP00000354977;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=LTN1	A	A/A,G/G	G	G	G	H/H,A/A	.	1	.	5.19	0.933	0.467	266	1	AC=2;AF=0.50;AN=4;CAnc=G;DP=107;GAnc=G;GRP=5.19;HRun=0;MQ=37.99;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;UR;bSC=266;mSC=0.933;pSC=0.467	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:60:99:0,163,2144:22,37:0,0:0,0:0,0:0:37.99:0;1/1:47:99:1850,141,0:0,0:0,0:23,24:0,0:0:37.00:0	-
21_34166190_A/T	21	34166190	T	ENSG00000205929	ENST00000382373	Transcript	NON_SYNONYMOUS_CODING	684	684	228	L/F	ttA/ttT	-	ENSP=ENSP00000371810;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C21orf62	A	T/T,T/T	T	T	T	A/A,A/A	.	1	.	-2.94	0.001	0.250	528	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=88;Dels=0.00;FS=0.000;GAnc=T;GRP=-2.94;HRun=3;HaplotypeScore=0.0000;MQ=39.38;MQ0=0;Map20=1;OAnc=T;QD=37.82;TS=HPGOMC;TSseq=A,T,T,T,T,T;UR;bSC=528;mSC=0.001;pSC=0.250	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1886,144,0:0,0:0,0:0,0:22,26:0:39.38:0;1/1:39:99:1551,117,0:0,0:0,0:0,0:22,17:0:37.00:0	-
21_34860833_T/G	21	34860833	G	ENSG00000177692	ENST00000314399	Transcript	NON_SYNONYMOUS_CODING	1307	868	290	Q/K	Cag/Aag	-	ENSP=ENSP00000320303;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DNAJC28	T	G/G,G/G	G	G	G	A/A,A/A	rs78121368	0.98	.	5.39	0.998	0.924	256	0.5	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.02;AN=4;BaseQRankSum=-0.535;CAnc=G;DP=94;Dels=0.00;FS=5.099;GAnc=G;GRP=5.39;HRun=0;HaplotypeScore=0.0000;MQ=39.13;MQ0=0;MQRankSum=-1.102;Map20=0.5;OAnc=G;QD=37.33;ReadPosRankSum=-1.291;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=256;mSC=0.998;pSC=0.924	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2086,126,0:0,0:0,0:16,38:1,0:0:39.13:0;1/1:39:99:1526,117,0:0,0:0,0:19,20:0,0:0:37.00:0	-
21_40572304_C/T	21	40572304	T	ENSG00000185658	ENST00000333229	Transcript	NON_SYNONYMOUS_CODING	4922	4594	1532	M/V	Atg/Gtg	-	ENSP=ENSP00000330753;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=BRWD1	C	T/T,C/C	T	T	T	A/A,H/H	rs78655344	0.98	.	4.65	1.000	0.841	342	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AN=4;BaseQRankSum=0.871;CAnc=T;DP=117;Dels=0.00;FS=0.000;GAnc=T;GRP=4.65;HRun=2;HaplotypeScore=3.9944;MQ=40.41;MQ0=0;MQRankSum=-2.154;Map20=1;OAnc=T;QD=36.57;ReadPosRankSum=-0.411;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=342;mSC=1.000;pSC=0.841	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:76:99:2812,151,0:0,0:1,1:0,0:47,27:0:40.41:0;0/0:41:99:0,123,1579:0,0:18,23:0,0:0,0:0:37.00:0	-
21_40800373_A/G	21	40800373	G	ENSG00000157578	ENST00000288350	Transcript	NON_SYNONYMOUS_CODING	412	47	16	S/F	tCc/tTc	-	ENSP=ENSP00000288350;PolyPhen=benign(0);SIFT=tolerated(0.58);HGNC=LCA5L	A	G/G,G/G	G	G	G	A/A,A/A	rs80329269	0.99	.	2.42	0.058	0.042	734	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=G;DP=81;Dels=0.00;FS=0.000;GAnc=G;GRP=2.42;HRun;HaplotypeScore=0.9958;MQ=36.56;MQ0=0;Map20=1;OAnc=G;QD=38.43;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=734;mSC=0.058;pSC=0.042	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1801,138,0:0,0:0,0:15,31:0,0:0:36.56:0;1/1:35:99:1381,105,0:0,0:0,0:14,21:0,0:0:37.00:0	-
21_43338302_A/G	21	43338302	G	ENSG00000157617	ENST00000329623	Transcript	NON_SYNONYMOUS_CODING	373	167	56	A/V	gCt/gTt	-	ENSP=ENSP00000329302;PolyPhen=benign(0);SIFT=tolerated(0.55);HGNC=C2CD2	A	G/G,G/G	G	G	G	A/A,A/A	rs2839421	0.94	.	-0.165	0.000	0.010	970	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.16;AMR_AF=0.06;AN=4;CAnc=G;DP=59;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=-0.165;HRun=0;HaplotypeScore=0.0000;MQ=38.55;MQ0=0;Map20=1;OAnc=G;QD=37.53;TS=HPGOM;TSseq=A,G,G,G,G;bSC=970;mSC=0.000;pSC=0.010	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1459,114,0:0,0:0,0:19,19:0,0:0:38.55:0;1/1:21:63.20:818,63,0:0,0:0,0:12,9:0,0:0:37.00:0	-
21_43808627_C/T	21	43808627	T	ENSG00000160183	ENST00000291532	Transcript	NON_SYNONYMOUS_CODING	1287	331	111	S/G	Agt/Ggt	-	ENSP=ENSP00000291532;PolyPhen=benign(0.001);SIFT=tolerated(0.65);HGNC=TMPRSS3	C	T/T,T/T	T	T	T	A/A,A/A	rs35227181	0.92	.	4.94	0.993	0.055	976	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.12;AMR_AF=0.10;AN=4;BaseQRankSum=-1.480;CAnc=T;DP=85;Dels=0.00;EUR_AF=0.11;FS=3.424;GAnc=T;GRP=4.94;HRun=0;HaplotypeScore=2.9992;MQ=38.41;MQ0=0;MQRankSum=-1.606;Map20=1;OAnc=T;QD=35.72;ReadPosRankSum=0.913;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=976;mSC=0.993;pSC=0.055	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2033,121,0:0,0:0,1:0,0:30,24:0:38.41:0;1/1:29:87.28:1147,87,0:0,0:0,0:0,0:15,14:0:37.00:0	-
21_43816182_G/A	21	43816182	A	ENSG00000160183	ENST00000380399	Transcript	NON_SYNONYMOUS_CODING	774	70	24	W/R	Tgg/Cgg	-	ENSP=ENSP00000369762;PolyPhen=benign(0.034);SIFT=tolerated(0.05);HGNC=TMPRSS3	G	G/G,A/A	A	A	A	H/H,A/A	.	1	CpG	-7.56	0.000	0.028	958	1	AC=2;AF=0.50;AN=4;CAnc=A;CpG;DP=70;GAnc=A;GRP=-7.56;HRun;MQ=37.64;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,-;UR;bSC=958;mSC=0.000;pSC=0.028	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:47:99:0,138,1815:0,0:0,0:24,23:0,0:0:37.64:0;1/1:23:69.23:918,69,0:7,16:0,0:0,0:0,0:0:37.00:0	-
21_43897491_G/T	21	43897491	T	ENSG00000160188	ENST00000291536	Transcript	NON_SYNONYMOUS_CODING	805	637	213	K/Q	Aaa/Caa	-	ENSP=ENSP00000291536;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RSPH1	G	T/T,T/T	T	T	T	A/A,A/A	.	1.0	.	1.81	0.020	0.091	964	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=T;DP=86;Dels=0.00;FS=0.000;GAnc=T;GRP=1.81;HRun=3;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=36.08;TS=HPGOMC;TSseq=G,T,T,T,T,C;UR;bSC=964;mSC=0.020;pSC=0.091	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1620,123,0:0,0:0,0:0,0:18,26:0:37.00:0;1/1:42:99:1669,126,0:0,0:0,0:0,0:17,25:0:37.00:0	-
21_45671052_T/A	21	45671052	A	ENSG00000142182	ENST00000436357	Transcript	NON_SYNONYMOUS_CODING	70	71	24	L/H	cTt/cAt	-	ENSP=ENSP00000411608;PolyPhen=unknown(0);HGNC=DNMT3L	T	A/A,A/A	A	A	A	A/A,A/A	.	1	RM	-2.7	0.000	0.014	934	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=50;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.7;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=35.84;RM;TS=HPGOM;TSseq=T,A,A,A,A;bSC=934;mSC=0.000;pSC=0.014	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1431,108,0:20,18:0,0:0,0:0,0:0:37.00:0;1/1:11:33.11:440,33,0:5,6:0,0:0,0:0,0:0:37.00:0	-
21_46233866_T/C	21	46233866	C	ENSG00000184900	ENST00000411651	Transcript	NON_SYNONYMOUS_CODING	288	175	59	G/S	Ggc/Agc	-	ENSP=ENSP00000409666;PolyPhen=benign(0);SIFT=tolerated(0.66);HGNC=SUMO3	T	C/C,C/C	C	C	C	A/A,A/A	rs9981327	0.94	.	-3.05	0.000	0.002	946	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.22;AMR_AF=0.03;AN=4;CAnc=C;DP=34;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=-3.05;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.05;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=946;mSC=0.000;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:20:60.19:774,60,0:0,0:8,11:0,0:0,0:0:37.00:0;1/1:14:42.12:527,42,0:0,0:9,5:0,0:0,0:0:37.00:0	-
21_47558482_C/T	21	47558482	T	ENSG00000160282	ENST00000355384	Transcript	NON_SYNONYMOUS_CODING	1383	1339	447	M/V	Atg/Gtg	-	ENSP=ENSP00000347545;PolyPhen=benign(0);SIFT=tolerated(0.82);HGNC=FTCD	C	C/C,T/T	T	T	T	H/H,A/A	.	1	.	0.181	0.618	0.049	862	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=37;GAnc=T;GRP=0.181;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,G;bSC=862;mSC=0.618;pSC=0.049	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:26:78.25:0,78,1026:0,0:13,12:0,0:0,0:0:37.00:0;1/1:11:33.11:440,33,0:0,0:0,0:0,0:8,3:0:37.00:0	-
21_47572887_C/T	21	47572887	T	ENSG00000160282	ENST00000291670	Transcript	NON_SYNONYMOUS_CODING	345	301	101	M/V	Atg/Gtg	-	ENSP=ENSP00000291670;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=FTCD	C	T/T,T/T	T	T	T	A/A,A/A	rs61735836	0.93	CpG	4.19	0.998	0.719	759	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.06;AMR_AF=0.03;AN=4;ASN_AF=0.16;CAnc=T;CpG;DP=53;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=4.19;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=37.30;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=759;mSC=0.998;pSC=0.719	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:81.27:1077,81,0:0,0:0,0:0,0:13,15:0:37.00:0;1/1:25:75.25:1000,75,0:0,0:0,0:0,0:17,8:0:37.00:0	-
21_47766113_T/G	21	47766113	G	ENSG00000160299	ENST00000337772	Transcript	NON_SYNONYMOUS_CODING	757	672	224	Q/H	caG/caT	-	ENSP=ENSP00000338675;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=PCNT	T	G/G,G/G	G	G	G	A/A,A/A	rs34500739	0.96	.	3.27	0.051	0.144	503	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.04;AMR_AF=0.04;AN=4;CAnc=G;DP=47;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=3.27;HRun=0;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;Map20=1;OAnc=G;QD=38.72;TS=HPGOMC;TSseq=T,G,G,G,G,G;bSC=503;mSC=0.051;pSC=0.144	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1427,108,0:0,0:0,0:15,21:0,0:0:37.83:0;1/1:11:33.09:425,33,0:0,0:0,0:9,2:0,0:0:37.00:0	+
22_24226584_A/T	22	24226584	T	ENSG00000133460	ENST00000316185	Transcript	NON_SYNONYMOUS_CODING	1304	1267	423	F/I	Ttc/Atc	-	ENSP=ENSP00000326748;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SLC2A11	A	T/T,A/A	T	T	T	A/A,H/H	rs34096096	0.99	.	2.62	0.996	0.274	884	1	1000gALT=T;AC=2;AF=0.50;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=T;DP=64;Dels=0.00;FS=0.000;GAnc=T;GRP=2.62;HRun;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;Map20=1;OAnc=T;QD=38.80;TS=HPGOM;TSseq=A,T,T,T,T;bSC=884;mSC=0.996;pSC=0.274	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1430,108,0:0,0:0,0:0,0:17,19:0:37.83:0;0/0:28:84.27:0,84,1110:18,10:0,0:0,0:0,0:0:37.00:0	+
22_24226950_A/G	22	24226950	G	ENSG00000133460	ENST00000316185	Transcript	NON_SYNONYMOUS_CODING	1451	1414	472	E/K	Gag/Aag	-	ENSP=ENSP00000326748;PolyPhen=benign(0.001);SIFT=tolerated(0.43);HGNC=SLC2A11	A	G/G,G/G	G	G	G	A/A,A/A	rs60882514	0.98	CpG	-1.62	0.003	0.136	884	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=83;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.62;HRun=0;HaplotypeScore=0.9997;MQ=37.62;MQ0=0;Map20=1;OAnc=G;QD=38.54;TS=HPGOM;TSseq=A,G,G,G,G;bSC=884;mSC=0.003;pSC=0.136	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1883,144,0:0,0:0,0:26,21:0,0:0:37.62:0;1/1:35:99:1384,105,0:0,0:0,0:14,21:0,0:0:37.00:0	+
22_25599824_G/A	22	25599824	A	ENSG00000100053	ENST00000215855	Transcript	NON_SYNONYMOUS_CODING	369	289	97	N/D	Aat/Gat	-	ENSP=ENSP00000215855;PolyPhen=benign(0.001);SIFT=tolerated(0.33);HGNC=CRYBB3	G	G/G,A/G	A	-	A	H/H,A/H	.	1	.	2.23	0.000	0.875	976	1	AC=1;AF=0.25;AN=4;CAnc=A;DP=80;GRP=2.23;HRun;MQ=37.62;MQ0=0;Map20=1;OAnc=A;TS=HPOMC;TSseq=G,A,N,A,A;bSC=976;mSC=0.000;pSC=0.875	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,141,1881:0,0:0,0:22,26:0,0:0:37.62:0;0/1:32:99:383,0,697:5,7:0,0:8,12:0,0:0:37.00:0	+
22_26286738_T/A	22	26286738	A	ENSG00000133454	ENST00000335473	Transcript	NON_SYNONYMOUS_CODING	4580	4330	1444	T/S	Act/Tct	-	ENSP=ENSP00000334563;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=MYO18B	T	A/A,T/T	A	A	A	A/A,H/H	rs33928909	0.97	.	2.28	0.949	0.289	964	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.03;AFR_AF=0.07;AMR_AF=0.03;AN=4;ASN_AF=0.04;CAnc=A;DP=78;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=2.28;HRun=0;HaplotypeScore=0.0000;MQ=37.60;MQ0=0;Map20=1;OAnc=A;QD=37.64;TS=HPGOMC;TSseq=T,A,A,A,A,A;UR;bSC=964;mSC=0.949;pSC=0.289	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1915,147,0:25,25:0,0:0,0:0,0:0:37.60:0;0/0:28:81.26:0,81,1058:0,0:0,0:0,0:15,13:0:37.00:0	+
22_31289891_A/G	22	31289891	G	ENSG00000184792	ENST00000332585	Transcript	NON_SYNONYMOUS_CODING	2382	2278	760	V/M	Gtg/Atg	-	ENSP=ENSP00000332576;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=OSBP2	A	G/G,G/G	G	G	G	A/A,A/A	rs34240867	0.99	CpG	1.95	0.001	0.856	295	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;BaseQRankSum=0.263;CAnc=G;CpG;DP=50;Dels=0.00;EUR_AF=0.01;FS=3.291;GAnc=G;GRP=1.95;HRun=0;HaplotypeScore=4.9829;MQ=38.49;MQ0=0;MQRankSum=0.893;Map20=1;OAnc=G;QD=34.25;ReadPosRankSum=0.998;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=295;mSC=0.001;pSC=0.856	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:56.29:1163,56,0:0,1:0,0:18,14:0,0:0:38.49:0;1/1:17:51.17:680,51,0:0,0:0,0:9,8:0,0:0:37.00:0	+
22_32487700_G/A	22	32487700	A	ENSG00000100170	ENST00000266088	Transcript	NON_SYNONYMOUS_CODING	1481	1231	411	T/A	Acc/Gcc	-	ENSP=ENSP00000266088;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=SLC5A1	G	A/G,A/A	A	A	A	A/H,A/A	rs17683430	0.97	CpG	5.94	1.000	0.959	592	1	1000gALT=A;AC=3;AF=0.75;AF1000g=0.03;AMR_AF=0.03;AN=4;BaseQRankSum=-0.228;CAnc=A;CpG;DP=72;Dels=0.01;EUR_AF=0.07;FS=2.884;GAnc=A;GRP=5.94;HRun=0;HaplotypeScore=1.9989;MQ=38.00;MQ0=0;MQRankSum=0.258;Map20=1;OAnc=A;QD=15.47;ReadPosRankSum=0.532;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=592;mSC=1.000;pSC=0.959	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:37:99:602,0,592:12,7:0,0:9,9:0,0:0:38.00:0;1/1:34:99:1274,102,0:12,22:0,0:0,0:0,0:0:36.01:0	+
22_37326443_G/C	22	37326443	C	ENSG00000100368	ENST00000262825	Transcript	NON_SYNONYMOUS_CODING	962	745	249	Q/E	Cag/Gag	-	ENSP=ENSP00000262825;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CSF2RB	G	C/C,C/C	C	C	C	A/A,A/A	rs16845	0.92	.	5.04	.	0.723	923	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.24;AMR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=C;DP=55;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=5.04;HRun=0;HaplotypeScore=0.0000;MQ=38.04;MQ0=0;Map20=1;OAnc=C;QD=36.27;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=923;pSC=0.723	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1411,111,0:0,0:20,16:0,0:0,0:0:38.04:0;1/1:17:48.16:640,48,0:0,0:10,7:0,0:0,0:0:37.00:0	+
22_37414468_T/G	22	37414468	G	ENSG00000128311	ENST00000249042	Transcript	NON_SYNONYMOUS_CODING	455	306	102	D/E	gaC/gaA	-	ENSP=ENSP00000249042;PolyPhen=benign(0.002);SIFT=tolerated(0.83);HGNC=TST	T	G/G,T/T	G	-	G	A/A,H/H	rs35156365	0.96	.	2.96	0.000	0.765	845	1	1000gALT=G;AC=2;AF=0.50;AF1000g=0.04;AFR_AF=0.17;AMR_AF=0.01;AN=4;CAnc=G;DP=55;Dels=0.00;FS=0.000;GRP=2.96;HRun;HaplotypeScore=0.0000;MQ=38.60;MQ0=0;Map20=1;OAnc=G;QD=37.52;TS=HPOMC;TSseq=T,G,G,G,-;bSC=845;mSC=0.000;pSC=0.765	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1421,111,0:0,0:0,0:23,13:0,0:0:38.60:0;0/0:18:54.18:0,54,716:0,0:0,0:0,0:10,8:0:37.00:0	-
22_39715047_C/G	22	39715047	G	ENSG00000100316	ENST00000453303	Transcript	NON_SYNONYMOUS_CODING	70	70	24	R/G	Cga/Gga	-	ENSP=ENSP00000415198;PolyPhen=benign(0.017);SIFT=deleterious(0);HGNC=RPL3	C	G/G,G/G	G	G	G	A/A,A/A	rs116372447	0.97	CpG	-0.722	0.001	0.278	792	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.03;AMR_AF=0.07;AN=4;ASN_AF=0.03;CAnc=G;CpG;DP=81;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.722;HRun;HaplotypeScore=0.0000;MQ=36.81;MQ0=0;Map20=1;OAnc=G;QD=38.16;TS=HPGOM;TSseq=C,G,G,G,G;UR;bSC=792;mSC=0.001;pSC=0.278	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2055,159,0:0,0:0,0:28,24:0,0:0:36.81:0;1/1:28:84.28:1115,84,0:0,0:0,0:9,19:0,0:0:37.00:0	-
22_40161572_C/G	22	40161572	G	ENSG00000176177	ENST00000325157	Transcript	NON_SYNONYMOUS_CODING	1126	875	292	T/R	aCa/aGa	-	ENSP=ENSP00000317431;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ENTHD1	C	G/G,G/G	G	G	G	A/A,A/A	rs111738363	1.0	.	3.61	0.005	0.509	629	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-0.321;CAnc=G;DP=79;Dels=0.00;FS=3.522;GAnc=G;GRP=3.61;HRun=0;HaplotypeScore=3.9989;MQ=37.55;MQ0=0;MQRankSum=-0.064;Map20=1;OAnc=G;QD=36.92;ReadPosRankSum=0.513;TS=HPGOMC;TSseq=C,G,G,G,G,G;UR;bSC=629;mSC=0.005;pSC=0.509	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2027,123,0:0,0:1,0:23,30:0,0:0:37.55:0;1/1:25:75.25:998,75,0:0,0:0,0:14,11:0,0:0:37.00:0	-
22_40760978_T/C	22	40760978	C	ENSG00000239900	ENST00000216194	Transcript	NON_SYNONYMOUS_CODING	1342	1286	429	A/V	gCt/gTt	-	ENSP=ENSP00000216194;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ADSL	T	C/C,C/C	C	C	C	A/A,A/A	.	1	.	5.67	.	0.953	243	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=64;Dels=0.00;FS=0.000;GAnc=C;GRP=5.67;HRun=0;HaplotypeScore=2.7881;MQ=39.83;MQ0=0;Map20=1;OAnc=C;QD=37.81;TS=HPGOMC;TSseq=T,C,C,C,C,C;UR;bSC=243;pSC=0.953	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1583,123,0:0,0:22,17:0,0:0,0:0:39.83:0;1/1:23:69.22:898,69,0:0,0:9,14:0,0:0,0:0:37.00:0	+
22_40815256_C/T	22	40815256	T	ENSG00000196588	ENST00000355630	Transcript	NON_SYNONYMOUS_CODING	1777	1186	396	T/A	Acc/Gcc	-	ENSP=ENSP00000347847;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=MKL1	C	T/T,T/T	T	T	T	A/A,A/A	rs34736200	0.98	CpG	-2.45	0.000	0.696	263	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.01;AN=4;BaseQRankSum=-0.538;CAnc=T;CpG;DP=42;Dels=0.00;FS=3.332;GAnc=T;GRP=-2.45;HRun=0;HaplotypeScore=1.9786;MQ=37.99;MQ0=0;MQRankSum=-0.657;Map20=1;OAnc=T;QD=33.53;ReadPosRankSum=0.777;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=263;mSC=0.000;pSC=0.696	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:47.25:1039,47,0:0,0:1,0:0,0:12,16:0:37.99:0;1/1:12:33.09:425,33,0:0,1:0,0:0,0:5,6:0:37.00:0	-
22_42607338_C/T	22	42607338	T	ENSG00000100207	ENST00000335626	Transcript	NON_SYNONYMOUS_CODING	4109	3974	1325	N/S	aAt/aGt	-	ENSP=ENSP00000335561;PolyPhen=benign(0.001);SIFT=tolerated(0.79);HGNC=TCF20	C	T/T,T/T	T	T	T	A/A,A/A	rs17002888	0.98	.	1.93	0.973	0.691	223	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;BaseQRankSum=-1.733;CAnc=T;DP=78;Dels=0.00;FS=3.324;GAnc=T;GRP=1.93;HRun;HaplotypeScore=0.9997;MQ=37.66;MQ0=0;MQRankSum=0.201;Map20=1;OAnc=T;QD=35.32;ReadPosRankSum=-0.040;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=223;mSC=0.973;pSC=0.691	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:89.41:1622,89,0:0,0:1,0:0,0:21,23:0:37.66:0;1/1:33:99:1309,99,0:0,0:0,0:0,0:21,12:0:37.00:0	-
22_42828276_C/G	22	42828276	G	ENSG00000235568	ENST00000329021	Transcript	NON_SYNONYMOUS_CODING	126	88	30	L/V	Ctg/Gtg	-	ENSP=ENSP00000333680;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=NFAM1	C	C/C,G/G	G	G	G	H/H,A/A	.	1	CpG	-3.09	0.001	0.106	671	1	AC=2;AF=0.50;AN=4;CAnc=G;CpG;DP=40;GAnc=G;GRP=-3.09;HRun;MQ=38.03;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=671;mSC=0.001;pSC=0.106	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:29:87.28:0,87,1152:0,0:15,14:0,0:0,0:0:38.03:0;1/1:11:33.11:440,33,0:0,0:0,0:6,5:0,0:0:37.00:0	-
22_43654278_G/A	22	43654278	A	ENSG00000159307	ENST00000290460	Transcript	NON_SYNONYMOUS_CODING	736	674	225	M/T	aTg/aCg	-	ENSP=ENSP00000290460;PolyPhen=benign(0.004);SIFT=tolerated(0.15);HGNC=SCUBE1	G	G/G,A/A	A	A	A	H/H,A/A	rs73420094	0.98	CpG	0.121	.	0.949	911	1	1000gALT=A;AC=2;AF=0.50;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=A;CpG;DP=58;GAnc=A;GRP=0.121;HRun=0;MQ=38.03;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,A;bSC=911;pSC=0.949	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:29:87.27:0,87,1128:0,0:0,0:11,17:0,0:0:38.03:0;1/1:29:84.27:1112,84,0:15,14:0,0:0,0:0,0:0:37.00:0	-
22_46641077_T/C	22	46641077	C	ENSG00000205643	ENST00000314567	Transcript	NON_SYNONYMOUS_CODING	708	284	95	S/N	aGt/aAt	-	ENSP=ENSP00000325301;PolyPhen=benign(0);SIFT=tolerated(0.75);HGNC=C22orf40	T	T/T,C/C	C	C	C	H/H,A/A	.	1	.	-1.35	0.001	0.782	645	1	AC=2;AF=0.50;AN=4;CAnc=C;DP=76;GAnc=C;GRP=-1.35;HRun=0;MQ=38.24;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=645;mSC=0.001;pSC=0.782	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:48:99:0,141,1839:0,0:0,0:0,0:22,25:0:38.24:0;1/1:28:84.23:1034,84,0:0,0:16,12:0,0:0,0:0:34.04:0	-
22_46752813_G/A	22	46752813	A	ENSG00000100416	ENST00000381019	Transcript	NON_SYNONYMOUS_CODING	1113	1093	365	T/A	Act/Gct	-	ENSP=ENSP00000370407;PolyPhen=benign(0.001);SIFT=tolerated(0.44);HGNC=TRMU	G	G/G,A/G	A	A	A	H/H,A/H	rs34591580	0.94	CpG	-8.63	0.028	0.249	759	1	1000gALT=A;AC=1;AF=0.25;AF1000g=0.06;AFR_AF=0.24;AMR_AF=0.01;AN=4;CAnc=A;CpG;DP=59;GAnc=A;GRP=-8.63;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=A;TS=HPGOMC;TSseq=G,A,A,A,A,G;bSC=759;mSC=0.028;pSC=0.249	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:43:83.39:0,83,1543:0,3:0,0:21,18:0,0:0:37.00:0;0/1:16:99:268,0,266:3,5:0,0:3,5:0,0:0:37.00:0	+
22_46805000_T/C	22	46805000	C	ENSG00000075275	ENST00000262738	Transcript	NON_SYNONYMOUS_CODING	5119	5119	1707	V/I	Gtc/Atc	-	ENSP=ENSP00000262738;PolyPhen=benign(0.01);SIFT=tolerated(1);HGNC=CELSR1	T	T/T,C/C	C	C	C	H/H,A/A	.	1	CpG	1.22	0.000	0.769	824	1	AC=2;AF=0.50;AN=4;CAnc=C;CpG;DP=63;GAnc=C;GRP=1.22;HRun=0;MQ=37.73;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=824;mSC=0.000;pSC=0.769	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:41:99:0,117,1535:0,0:0,0:0,0:22,18:0:37.73:0;1/1:22:66.21:866,66,0:0,0:15,7:0,0:0,0:0:37.00:0	-
22_47309290_C/T	22	47309290	T	ENSG00000054611	ENST00000380995	Transcript	NON_SYNONYMOUS_CODING	1231	935	312	L/P	cTt/cCt	-	ENSP=ENSP00000370383;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TBC1D22A	C	T/C,T/T	T	T	T	A/H,A/A	rs73478584	0.91	.	3.03	0.000	0.085	970	1	1000gALT=T;AC=3;AF=0.75;AF1000g=0.09;AFR_AF=0.29;AMR_AF=0.11;AN=4;ASN_AF=0.02;BaseQRankSum=-0.429;CAnc=T;DP=72;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=3.03;HRun=2;HaplotypeScore=0.9983;MQ=37.54;MQ0=3;MQRankSum=-1.552;Map20=1;OAnc=T;QD=11.49;ReadPosRankSum=0.547;TS=HPGOMC;TSseq=C,T,-,T,T,T;UR;bSC=970;mSC=0.000;pSC=0.085	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/1:42:99:513,0,770:0,0:15,7:0,0:14,6:0:37.54:1;1/1:30:84.27:1091,84,0:0,0:0,0:0,0:19,11:0:35.35:2	+
22_50660131_C/T	22	50660131	T	ENSG00000128159	ENST00000248846	Transcript	NON_SYNONYMOUS_CODING	2762	2657	886	E/G	gAg/gGg	-	ENSP=ENSP00000248846;PolyPhen=benign(0.009);SIFT=tolerated(1);HGNC=TUBGCP6	C	C/C,T/T	T	T	T	H/H,A/A	.	1	.	-6.69	0.000	0.113	535	1	AC=2;AF=0.50;AN=4;CAnc=T;DP=43;GAnc=T;GRP=-6.69;HRun=0;MQ=37.00;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;bSC=535;mSC=0.000;pSC=0.113	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:32:96.31:0,96,1260:0,0:18,14:0,0:0,0:0:37.00:0;1/1:11:30.10:393,30,0:0,0:0,0:0,0:4,7:0:37.00:0	-
22_50684256_T/C	22	50684256	C	ENSG00000100429	ENST00000216271	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2187	1834	612	D/N	Gac/Aac	-	ENSP=ENSP00000216271;PolyPhen=benign(0);SIFT=tolerated(0.65);HGNC=HDAC10	T	C/C,C/C	C	C	C	A/A,A/A	rs75596977	0.95	.	5.03	0.962	0.523	546	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.14;CAnc=C;DP=54;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=5.03;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.52;TS=HPGOMC;TSseq=T,C,C,C,C,C;bSC=546;mSC=0.962;pSC=0.523	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1574,120,0:0,0:18,22:0,0:0,0:0:37.00:0;1/1:14:42.13:547,42,0:0,0:6,8:0,0:0,0:0:37.00:0	-
22_50989678_A/G	22	50989678	G	ENSG00000217442	ENST00000402753	Transcript	NON_SYNONYMOUS_CODING	290	263	88	P/L	cCg/cTg	-	ENSP=ENSP00000385122;PolyPhen=unknown(0);HGNC=SYCE3	A	G/G,G/G	G	G	G	A/A,A/A	rs6009989	0.94	CpG	1.72	0.007	0.066	690	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.21;AMR_AF=0.04;AN=4;ASN_AF=0.01;BaseQRankSum=0.693;CAnc=G;CpG;DP=70;Dels=0.00;EUR_AF=0.03;FS=3.123;GAnc=G;GRP=1.72;HRun;HaplotypeScore=0.0000;MQ=37.75;MQ0=0;MQRankSum=-0.520;Map20=1;OAnc=G;QD=35.87;ReadPosRankSum=-1.473;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=690;mSC=0.007;pSC=0.066	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:77.38:1468,77,0:0,1:0,0:20,19:0,0:0:37.75:0;1/1:30:90.28:1161,90,0:0,0:0,0:18,12:0,0:0:37.00:0	-