#Uploaded_variation	Chrom	Pos	Allele	Gene	Feature	Feature_type	Consequence	cDNA_position	CDS_position	Protein_position	Amino_acids	Codons	Existing_variation	Extra	Human	Archaics_(AltaiNea,Denisova)	Ancestor	Gorilla	Orangutan	States	dbSNP	Human_1000G(Global)	Flag	GERP_score	Mammal_score	Primate_score	B_score	Mappability_score	VCF_info	VCF_format	VCF_values	Strand
X_9905697_A/G	X	9905697	G	ENSG00000146950	ENST00000380913	Transcript	NON_SYNONYMOUS_CODING	4201	4111	1371	I/V	Atc/Gtc	-	ENSP=ENSP00000370299;PolyPhen=benign(0.022);SIFT=tolerated(0.7);HGNC=SHROOM2	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	0.469	.	0.926	.	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=57;Dels=0.00;FS=0.000;GAnc=A;GRP=0.469;HRun=0;HaplotypeScore=3.5657;MQ=38.33;MQ0=0;Map20=1;OAnc=A;QD=38.01;TS=HPGOM;TSseq=A,A,A,A,A;pSC=0.926	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1440,111,0:0,0:0,0:23,14:0,0:0:38.33:0;1/1:20:60.19:787,60,0:0,0:0,0:13,7:0,0:0:37.00:0	+
X_17768315_C/T	X	17768315	T	ENSG00000047634	ENST00000380041	Transcript	NON_SYNONYMOUS_CODING	933	605	202	T/M	aCg/aTg	-	ENSP=ENSP00000369380;PolyPhen=benign(0);SIFT=tolerated(0.13);HGNC=SCML1	C	T/T,T/T	C	C	T	N/N,N/N	rs137929609	1.0	CpG	-3.8	0.000	0.024	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.00;AN=4;CAnc=C;CpG;DP=82;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.8;HRun=0;HaplotypeScore=0.0000;MQ=38.64;MQ0=0;Map20=1;OAnc=T;QD=38.21;TS=HPGOMC;TSseq=C,T,C,T,T,T;mSC=0.000;pSC=0.024	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2097,160,0:0,0:0,0:0,0:25,29:0:38.64:0;1/1:28:84.26:1103,84,0:0,0:0,0:0,0:13,15:0:37.00:0	+
X_18221980_C/A	X	18221980	A	ENSG00000177324	ENST00000380030	Transcript	NON_SYNONYMOUS_CODING	702	548	183	S/I	aGc/aTc	-	ENSP=ENSP00000369369;PolyPhen=possibly_damaging(0.459);SIFT=deleterious(0);HGNC=BEND2	C	A/A,A/A	C	C	C	N/N,N/N	rs75342823	0.98	.	-2.59	.	0.215	.	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.03;AN=4;BaseQRankSum=1.308;CAnc=C;DP=87;Dels=0.00;FS=3.478;GAnc=C;GRP=-2.59;HRun=0;HaplotypeScore=0.0000;MQ=38.73;MQ0=0;MQRankSum=1.308;Map20=1;OAnc=C;QD=35.78;ReadPosRankSum=-1.450;TS=HPGOMC;TSseq=C,C,C,C,C,C;pSC=0.215	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1858,107,0:27,23:0,1:0,0:0,0:0:38.73:0;1/1:36:99:1424,108,0:14,22:0,0:0,0:0,0:0:37.00:0	-
X_47774395_G/T	X	47774395	T	ENSG00000197779	ENST00000338637	Transcript	NON_SYNONYMOUS_CODING	599	350	117	G/V	gGt/gTt	-	ENSP=ENSP00000341151;PolyPhen=benign(0.214);SIFT=tolerated(0.33);HGNC=ZNF81	G	T/T,T/T	G	G	G	N/N,N/N	rs17147793	0.99	.	1.34	.	0.209	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.00;AN=4;CAnc=G;DP=102;Dels=0.00;FS=0.000;GAnc=G;GRP=1.34;HRun;HaplotypeScore=0.0000;MQ=37.49;MQ0=0;Map20=1;OAnc=G;QD=37.64;TS=HPGOMC;TSseq=G,G,G,G,G,G;pSC=0.209	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2329,178,0:0,0:0,0:0,0:27,34:0:37.49:0;1/1:41:99:1632,123,0:0,0:0,0:0,0:26,15:0:37.00:0	+
X_50345788_G/A	X	50345788	A	ENSG00000158352	ENST00000289292	Transcript	NON_SYNONYMOUS_CODING	4071	3787	1263	P/S	Cct/Tct	-	ENSP=ENSP00000289292;PolyPhen=probably_damaging(0.993);HGNC=SHROOM4	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	3.72	.	0.882	.	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=91;Dels=0.00;FS=0.000;GAnc=G;GRP=3.72;HRun;HaplotypeScore=0.9997;MQ=38.03;MQ0=0;Map20=1;OAnc=G;QD=38.08;TS=HPGOMC;TSseq=G,G,G,G,G,G;pSC=0.882	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2242,172,0:30,28:0,0:0,0:0,0:0:38.03:0;1/1:33:99:1301,99,0:17,16:0,0:0,0:0,0:0:37.00:0	-
X_51638312_C/T	X	51638312	T	ENSG00000179222	ENST00000326587	Transcript	NON_SYNONYMOUS_CODING	399	209	70	A/V	gCt/gTt	-	ENSP=ENSP00000325333;PolyPhen=possibly_damaging(0.698);SIFT=deleterious(0);HGNC=MAGED1	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	.	.	.	.	.	AC=4;AF=1.00;AN=4;CAnc=C;DP=60;Dels=0.00;FS=0.000;GAnc=C;HRun;HaplotypeScore=0.9997;MQ=39.37;MQ0=0;OAnc=C;QD=34.05;TS=HPGOMC;TSseq=C,-,C,C,C,C	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1293,102,0:0,0:0,0:0,0:20,16:0:39.37:0;1/1:23:69.22:908,69,0:0,0:0,0:0,0:10,13:0:37.00:0	+
X_73961555_T/C	X	73961555	C	ENSG00000050030	ENST00000055682	Transcript	NON_SYNONYMOUS_CODING	3454	2837	946	N/S	aAc/aGc	-	ENSP=ENSP00000055682;PolyPhen=benign(0.13);SIFT=tolerated(0.21);HGNC=KIAA2022	T	C/C,C/C	T	-	T	N/N,N/N	.	1	.	-0.151	0.999	0.705	.	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=87;Dels=0.00;FS=0.000;GRP=-0.151;HRun=0;HaplotypeScore=2.9523;MQ=37.98;MQ0=0;Map20=1;OAnc=T;QD=38.72;TS=HPOMC;TSseq=T,T,T,T,T;mSC=0.999;pSC=0.705	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2395,184,0:0,0:35,25:0,0:0,0:0:37.98:0;1/1:26:78.24:1020,78,0:0,0:14,12:0,0:0,0:0:37.00:0	-
X_76938100_T/C	X	76938100	C	ENSG00000085224	ENST00000373344	Transcript	NON_SYNONYMOUS_CODING	2863	2648	883	Q/R	cAa/cGa	-	ENSP=ENSP00000362441;PolyPhen=benign(0.001);HGNC=ATRX	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	0.297	0.987	0.317	.	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=83;Dels=0.00;FS=0.000;GAnc=T;GRP=0.297;HRun=0;HaplotypeScore=0.9997;MQ=40.59;MQ0=0;Map20=1;OAnc=T;QD=37.01;TS=HPGOMC;TSseq=T,T,T,T,T,C;mSC=0.987;pSC=0.317	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1810,141,0:0,0:23,24:0,1:0,0:0:40.59:0;1/1:35:99:1369,105,0:0,0:19,16:0,0:0,0:0:37.00:0	-
X_77392484_G/C	X	77392484	C	ENSG00000187325	ENST00000341864	Transcript	NON_SYNONYMOUS_CODING	504	409	137	P/A	Cct/Gct	-	ENSP=ENSP00000339917;PolyPhen=benign(0.001);SIFT=tolerated(0.61);HGNC=TAF9B	G	C/C,C/C	G	G	G	N/N,N/N	.	1	.	3.03	1.000	0.910	.	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.524;CAnc=G;DP=68;Dels=0.00;FS=0.000;GAnc=G;GRP=3.03;HRun=0;HaplotypeScore=1.9964;MQ=37.00;MQ0=0;MQRankSum=-0.282;Map20=1;OAnc=G;QD=34.78;ReadPosRankSum=0.201;TS=HPGO;TSseq=G,G,G,G;mSC=1.000;pSC=0.910	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:86.38:1563,86,0:0,0:27,14:1,0:1,0:0:37.00:0;1/1:24:72.23:950,72,0:0,0:12,12:0,0:0,0:0:37.00:0	-
X_83128470_G/A	X	83128470	A	ENSG00000183035	ENST00000329312	Transcript	NON_SYNONYMOUS_CODING	791	754	252	G/R	Gga/Aga	-	ENSP=ENSP00000331556;PolyPhen=unknown(0);SIFT=tolerated(0.13);HGNC=CYLC1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	-1.13	0.000	.	.	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=80;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.13;HRun=0;HaplotypeScore=1.9995;MQ=39.17;MQ0=0;Map20=1;OAnc=G;QD=35.71;TS=HPGOMC;TSseq=G,G,G,G,G,G;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:1961,150,0:23,31:0,0:0,0:0,0:0:39.17:0;1/1:26:78.25:1030,78,0:16,10:0,0:0,0:0,0:0:37.00:0	+
X_83129189_G/T	X	83129189	T	ENSG00000183035	ENST00000329312	Transcript	NON_SYNONYMOUS_CODING	1510	1473	491	E/D	gaG/gaT	-	ENSP=ENSP00000331556;PolyPhen=unknown(0);SIFT=tolerated(0.45);HGNC=CYLC1	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	-7.79	0.000	.	.	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=112;Dels=0.00;FS=0.000;GAnc=G;GRP=-7.79;HRun=2;HaplotypeScore=0.0000;MQ=38.64;MQ0=0;Map20=1;OAnc=G;QD=38.15;TS=HPGOMC;TSseq=G,G,G,G,G,G;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:72:99:2780,211,0:0,0:0,0:0,0:53,19:0:38.64:0;1/1:40:99:1587,120,0:0,0:0,0:0,0:22,18:0:37.00:0	+
X_106082584_T/G	X	106082584	G	ENSG00000133138	ENST00000276175	Transcript	NON_SYNONYMOUS_CODING	1273	1232	411	V/G	gTg/gGg	-	ENSP=ENSP00000276175;PolyPhen=benign(0.001);SIFT=tolerated(0.33);HGNC=TBC1D8B	T	G/G,G/G	T	T	T	N/N,N/N	.	1	.	-10.3	0.000	0.050	.	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=95;Dels=0.00;FS=0.000;GAnc=T;GRP=-10.3;HRun=2;HaplotypeScore=0.0000;MQ=38.61;MQ0=0;Map20=1;OAnc=T;QD=37.47;TS=HPGOMC;TSseq=T,T,T,T,C,T;mSC=0.000;pSC=0.050	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2094,160,0:0,1:0,0:31,22:0,0:0:38.61:0;1/1:40:99:1571,120,0:0,0:0,0:14,26:0,0:0:37.00:0	+
X_107037710_A/G	X	107037710	G	ENSG00000170935	ENST00000372379	Transcript	NON_SYNONYMOUS_CODING	260	260	87	H/R	cAt/cGt	-	ENSP=ENSP00000361454;PolyPhen=benign(0.073);SIFT=tolerated(0.08);HGNC=NCBP2L	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	3.62	0.001	0.054	.	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.030;CAnc=A;DP=98;Dels=0.00;FS=0.000;GAnc=A;GRP=3.62;HRun=0;HaplotypeScore=0.9997;MQ=38.55;MQ0=0;MQRankSum=-1.550;Map20=1;OAnc=A;QD=36.83;ReadPosRankSum=0.577;TS=HPGOMC;TSseq=A,A,A,A,A,A;mSC=0.001;pSC=0.054	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2133,129,0:0,1:0,0:27,28:0,0:0:38.55:0;1/1:41:99:1615,123,0:0,0:0,0:21,20:0,0:0:37.00:0	+
X_117732044_A/T	X	117732044	T	ENSG00000147251	ENST00000276202	Transcript	NON_SYNONYMOUS_CODING	2500	2437	813	I/F	Att/Ttt	-	ENSP=ENSP00000276202;PolyPhen=possibly_damaging(0.68);SIFT=deleterious(0);HGNC=DOCK11	A	T/T,T/T	A	A	A	N/N,N/N	rs16995229	0.95	.	4.36	1.000	0.868	.	0.5	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.06;AMR_AF=0.02;AN=4;CAnc=A;DP=91;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=A;GRP=4.36;HRun=2;HaplotypeScore=0.0000;MQ=41.01;MQ0=0;Map20=0.5;OAnc=A;QD=38.65;TS=HPGOMC;TSseq=A,A,A,A,A,A;mSC=1.000;pSC=0.868	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2236,172,0:0,0:0,0:0,0:34,23:0:41.01:0;1/1:34:99:1322,102,0:0,0:0,0:0,0:17,17:0:37.00:0	+
X_128927055_A/G	X	128927055	G	ENSG00000122122	ENST00000356892	Transcript	NON_SYNONYMOUS_CODING	1006	892	298	M/V	Atg/Gtg	-	ENSP=ENSP00000349359;PolyPhen=benign(0);SIFT=tolerated(0.31);HGNC=SASH3	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	2.22	0.603	0.646	.	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.144;CAnc=A;DP=72;Dels=0.00;FS=0.000;GAnc=A;GRP=2.22;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.516;Map20=1;OAnc=A;QD=35.50;ReadPosRankSum=0.794;TS=HPGOMC;TSseq=A,A,A,A,A,A;mSC=0.603;pSC=0.646	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1808,104,0:1,2:0,0:26,21:0,0:0:37.00:0;1/1:22:66.21:869,66,0:0,0:0,0:13,9:0,0:0:37.00:0	+
X_129373625_T/C	X	129373625	C	ENSG00000056277	ENST00000066465	Transcript	NON_SYNONYMOUS_CODING	578	424	142	I/V	Att/Gtt	-	ENSP=ENSP00000066465;PolyPhen=benign(0.001);SIFT=tolerated(0.3);HGNC=ZNF280C	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	0.994	0.003	0.013	.	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=96;Dels=0.00;FS=0.000;GAnc=T;GRP=0.994;HRun=0;HaplotypeScore=0.9332;MQ=37.98;MQ0=0;Map20=1;OAnc=T;QD=36.85;TS=HPGOMC;TSseq=T,T,T,T,C,G;mSC=0.003;pSC=0.013	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2281,178,0:0,0:32,28:0,1:0,0:0:37.98:0;1/1:35:99:1348,105,0:0,0:19,16:0,0:0,0:0:37.00:0	-
X_134155729_G/A	X	134155729	A	ENSG00000212747	ENST00000538706	Transcript	NON_SYNONYMOUS_CODING	439	439	147	H/Y	Cat/Tat	-	ENSP=ENSP00000442860;PolyPhen=benign(0.335);HGNC=FAM127C	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	2.09	.	0.486	.	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=68;Dels=0.00;FS=0.000;GAnc=G;GRP=2.09;HRun=0;HaplotypeScore=0.9867;MQ=37.45;MQ0=0;Map20=1;OAnc=G;QD=38.80;TS=HPGOM;TSseq=G,G,G,G,G;pSC=0.486	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1740,132,0:28,15:0,0:0,0:0,0:0:37.45:0;1/1:24:72.23:948,72,0:12,12:0,0:0,0:0,0:0:37.00:0	-
X_149680307_G/A	X	149680307	A	ENSG00000013619	ENST00000432680	Transcript	NON_SYNONYMOUS_CODING	2136	1961	654	R/Q	cGg/cAg	-	ENSP=ENSP00000414517;PolyPhen=benign(0.002);SIFT=tolerated(1);HGNC=MAMLD1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	-2.48	0.922	0.783	.	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=65;Dels=0.00;FS=0.000;GAnc=G;GRP=-2.48;HRun=0;HaplotypeScore=0.0000;MQ=39.21;MQ0=0;Map20=1;OAnc=G;QD=37.00;TS=HPGOMC;TSseq=G,G,G,G,G,G;mSC=0.922;pSC=0.783	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1439,108,0:19,18:0,0:0,0:0,1:0:39.21:0;1/1:27:81.26:1070,81,0:13,14:0,0:0,0:0,0:0:37.00:0	+
X_150817101_A/G	X	150817101	G	ENSG00000166049	ENST00000370357	Transcript	NON_SYNONYMOUS_CODING	889	644	215	Q/R	cAa/cGa	-	ENSP=ENSP00000359382;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=PASD1	A	G/G,G/G	A	A	A	N/N,N/N	rs144905518	1.0	.	-0.679	.	0.028	.	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.022;CAnc=A;DP=63;Dels=0.00;EUR_AF=0.00;FS=0.000;GAnc=A;GRP=-0.679;HRun=0;HaplotypeScore=0.0000;MQ=40.68;MQ0=0;MQRankSum=1.111;Map20=1;OAnc=A;QD=35.70;ReadPosRankSum=1.111;TS=HPGOMC;TSseq=A,A,A,A,A,A;pSC=0.028	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:77.34:1425,77,0:0,1:0,0:14,24:0,0:0:40.68:0;1/1:24:72.22:929,72,0:0,0:0,0:12,12:0,0:0:37.00:0	+
X_151092827_G/T	X	151092827	T	ENSG00000147381	ENST00000276344	Transcript	NON_SYNONYMOUS_CODING	909	691	231	V/L	Gtg/Ttg	-	ENSP=ENSP00000276344;PolyPhen=benign(0.061);SIFT=tolerated(0.23);HGNC=MAGEA4	G	T/T,T/T	G	G	G	N/N,N/N	.	1.0	.	-1.83	0.000	0.034	.	0.5	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.00;AMR_AF=0.00;AN=4;CAnc=G;DP=56;Dels=0.00;EUR_AF=0.00;FS=0.000;GAnc=G;GRP=-1.83;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=0.5;OAnc=G;QD=38.62;TS=HPGOMC;TSseq=G,G,G,G,G,G;mSC=0.000;pSC=0.034	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1462,111,0:0,0:0,0:0,0:15,22:0:37.81:0;1/1:19:57.17:712,57,0:0,0:0,0:0,0:10,9:0:35.86:0	+
X_153135008_G/C	X	153135008	C	ENSG00000198910	ENST00000361699	Transcript	NON_SYNONYMOUS_CODING	1245	1234	412	L/V	Ctc/Gtc	-	ENSP=ENSP00000355380;PolyPhen=benign(0.007);SIFT=tolerated(0.12);HGNC=L1CAM	G	C/C,C/C	G	G	G	N/N,N/N	.	1	.	0.0908	0.000	0.125	.	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=66;Dels=0.00;FS=0.000;GAnc=G;GRP=0.0908;HRun=3;HaplotypeScore=0.0000;MQ=38.41;MQ0=0;Map20=1;OAnc=G;QD=39.02;TS=HPGOMC;TSseq=G,G,-,G,G,G;mSC=0.000;pSC=0.125	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1672,126,0:0,0:24,18:0,0:0,0:0:38.41:0;1/1:24:72.23:948,72,0:0,0:16,8:0,0:0,0:0:37.00:0	-
X_154020521_A/G	X	154020521	G	ENSG00000130830	ENST00000369531	Transcript	NON_SYNONYMOUS_CODING	267	142	48	Y/H	Tac/Cac	-	ENSP=ENSP00000358544;PolyPhen=probably_damaging(0.945);SIFT=deleterious(0.01);HGNC=MPP1	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	5.19	1.000	0.929	.	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.933;CAnc=A;DP=63;Dels=0.00;FS=0.000;GAnc=A;GRP=5.19;HRun=0;HaplotypeScore=0.9997;MQ=37.77;MQ0=0;MQRankSum=0.578;Map20=1;OAnc=A;QD=35.74;ReadPosRankSum=1.644;TS=HPGOMC;TSseq=A,A,A,A,A,A;mSC=1.000;pSC=0.929	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:77.35:1427,77,0:1,0:0,0:21,14:0,0:0:37.77:0;1/1:24:69.22:911,69,0:0,0:0,0:11,13:0,0:0:37.00:0	-
1_1201486_G/C	1	1201486	C	ENSG00000160087	ENST00000339385	Transcript	NON_SYNONYMOUS_CODING	18	18	6	I/M	atC/atG	-	ENSP=ENSP00000340197;PolyPhen=possibly_damaging(0.713);SIFT=deleterious(0.04);HGNC=UBE2J2	G	C/C,C/C	G	G	G	N/N,N/N	.	1	CpG	-0.902	.	0.006	.	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.644;CAnc=G;CpG;DP=57;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.902;HRun;HaplotypeScore=0.8321;MQ=37.77;MQ0=0;MQRankSum=1.200;Map20=1;OAnc=G;QD=37.31;ReadPosRankSum=1.644;TS=HPGOMC;TSseq=G,G,G,G,A,T;pSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1488,114,0:0,0:21,17:0,1:0,0:0:37.77:0;1/1:18:54.17:712,54,0:0,0:11,7:0,0:0,0:0:37.00:0	-
1_1690544_T/C	1	1690544	C	ENSG00000008130	ENST00000344463	Transcript	NON_SYNONYMOUS_CODING	793	571	191	T/A	Act/Gct	-	ENSP=ENSP00000340925;PolyPhen=benign(0.011);SIFT=tolerated(0.75);HGNC=NADK	T	C/C,C/C	T	T	T	N/N,N/N	rs116344604	0.98	.	-7.03	.	0.016	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AN=4;BaseQRankSum=0.578;CAnc=T;DP=43;Dels=0.00;FS=3.174;GAnc=T;GRP=-7.03;HRun=0;HaplotypeScore=1.9576;MQ=39.17;MQ0=0;MQRankSum=-0.835;Map20=1;OAnc=T;QD=35.16;ReadPosRankSum=1.476;TS=HPGOMC;TSseq=T,T,T,T,T,C;pSC=0.016	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:27:41.25:982,41,0:0,0:14,12:0,0:0,1:0:39.17:0;1/1:16:48.14:606,48,0:0,0:10,6:0,0:0,0:0:37.00:0	-
1_1849480_G/A	1	1849480	A	ENSG00000178821	ENST00000378598	Transcript	NON_SYNONYMOUS_CODING	287	287	96	T/M	aCg/aTg	-	ENSP=ENSP00000367861;PolyPhen=unknown(0);HGNC=TMEM52	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	-8.41	.	.	799	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=62;Dels=0.00;FS=0.000;GAnc=G;GRP=-8.41;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.90;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=799	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1667,126,0:23,19:0,0:0,0:0,0:0:37.00:0;1/1:20:60.19:791,60,0:10,10:0,0:0,0:0,0:0:37.00:0	-
1_2252827_G/A	1	2252827	A	ENSG00000116151	ENST00000378531	Transcript	NON_SYNONYMOUS_CODING	1663	1489	497	R/W	Cgg/Tgg	-	ENSP=ENSP00000367792;PolyPhen=possibly_damaging(0.765);SIFT=deleterious(0);HGNC=MORN1	G	A/A,A/A	G	G	G	N/N,N/N	rs188024983	1.0	CpG	-1.98	0.000	0.012	917	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=41;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.98;HRun;HaplotypeScore=0.0000;MQ=39.43;MQ0=0;Map20=1;OAnc=G;QD=36.87;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=917;mSC=0.000;pSC=0.012	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:24:69.23:918,69,0:9,15:0,0:0,0:0,0:0:39.43:0;1/1:17:51.15:649,51,0:8,9:0,0:0,0:0,0:0:37.00:0	-
1_7869968_G/A	1	7869968	A	ENSG00000049246	ENST00000361923	Transcript	NON_SYNONYMOUS_CODING	1430	1255	419	V/M	Gtg/Atg	-	ENSP=ENSP00000355031;PolyPhen=benign(0.003);SIFT=deleterious(0.05);HGNC=PER3	G	A/A,A/A	G	G	G	N/N,N/N	rs35426314	0.99	CpG	0.403	0.000	0.294	670	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=62;Dels=0.00;FS=0.000;GAnc=G;GRP=0.403;HRun=0;HaplotypeScore=1.9995;MQ=37.45;MQ0=0;Map20=1;OAnc=G;QD=33.76;TS=HPGOMC;TSseq=G,G,-,G,G,G;bSC=670;mSC=0.000;pSC=0.294	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1519,117,0:19,25:0,0:0,0:0,0:0:37.45:0;1/1:18:54.17:698,54,0:11,7:0,0:0,0:0,0:0:37.00:0	+
1_7910976_T/G	1	7910976	G	ENSG00000049247	ENST00000054668	Transcript	NON_SYNONYMOUS_CODING	155	155	52	H/P	cAt/cCt	-	ENSP=ENSP00000054668;PolyPhen=benign(0.047);SIFT=tolerated(0.07);HGNC=UTS2	T	G/G,G/G	T	T	T	N/N,N/N	.	1	.	3.19	0.000	0.095	763	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.650;CAnc=T;DP=74;Dels=0.00;FS=0.000;GAnc=T;GRP=3.19;HRun;HaplotypeScore=1.9916;MQ=39.82;MQ0=0;MQRankSum=-0.650;Map20=1;OAnc=T;QD=36.58;ReadPosRankSum=0.072;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=763;mSC=0.000;pSC=0.095	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1789,104,0:0,0:0,0:25,21:1,0:0:39.82:0;1/1:26:78.26:1040,78,0:0,0:0,0:15,11:0,0:0:37.00:0	-
1_9780196_A/G	1	9780196	G	ENSG00000171608	ENST00000360563	Transcript	NON_SYNONYMOUS_CODING	1376	1261	421	T/A	Acg/Gcg	-	ENSP=ENSP00000353766;PolyPhen=benign(0.003);SIFT=tolerated(0.34);HGNC=PIK3CD	A	G/G,G/G	A	A	A	N/N,N/N	rs28730674	0.99	.	-0.546	0.031	0.094	590	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.04;CAnc=A;DP=49;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.546;HRun=0;HaplotypeScore=1.9993;MQ=38.78;MQ0=0;Map20=1;OAnc=A;QD=38.55;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=590;mSC=0.031;pSC=0.094	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1305,99,0:0,0:0,0:15,18:0,0:0:38.78:0;1/1:16:48.16:640,48,0:0,0:0,0:10,6:0,0:0:37.00:0	+
1_9780598_T/C	1	9780598	C	ENSG00000171608	ENST00000360563	Transcript	NON_SYNONYMOUS_CODING	1587	1472	491	M/T	aTg/aCg	-	ENSP=ENSP00000353766;PolyPhen=benign(0.002);SIFT=tolerated(0.22);HGNC=PIK3CD	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-6.44	0.000	0.000	590	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.549;CAnc=T;DP=54;Dels=0.00;FS=3.118;GAnc=T;GRP=-6.44;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-0.549;Map20=1;OAnc=T;QD=35.51;ReadPosRankSum=1.564;TS=HPGOMC;TSseq=T,T,T,T,C,T;bSC=590;mSC=0.000;pSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:83.39:1524,83,0:0,0:19,20:0,0:2,0:0:37.00:0;1/1:12:36.10:454,36,0:0,0:6,6:0,0:0,0:0:37.00:0	+
1_10363664_G/T	1	10363664	T	ENSG00000054523	ENST00000377083	Transcript	NON_SYNONYMOUS_CODING	2734	2421	807	M/I	atG/atT	-	ENSP=ENSP00000366287;PolyPhen=benign(0);SIFT=tolerated(0.49);HGNC=KIF1B	G	T/T,T/T	G	G	G	N/N,N/N	rs41274458	0.99	.	5.58	0.764	0.902	219	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AN=4;CAnc=G;DP=69;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=5.58;HRun;HaplotypeScore=0.9997;MQ=40.77;MQ0=0;Map20=1;OAnc=G;QD=37.05;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=219;mSC=0.764;pSC=0.902	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1441,111,0:0,0:0,0:0,0:21,16:0:40.77:0;1/1:31:93.29:1209,93,0:0,0:0,0:0,0:17,14:0:37.00:0	+
1_10521671_C/T	1	10521671	T	ENSG00000160049	ENST00000377038	Transcript	NON_SYNONYMOUS_CODING	940	872	291	R/Q	cGg/cAg	-	ENSP=ENSP00000366237;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DFFA	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	-1.53	0.759	0.504	661	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=61;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.53;HRun=0;HaplotypeScore=0.0000;MQ=38.64;MQ0=0;Map20=1;OAnc=C;QD=36.37;TS=HPGOMC;TSseq=C,T,C,C,C,C;bSC=661;mSC=0.759;pSC=0.504	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1342,102,0:0,0:0,0:0,0:16,19:0:38.64:0;1/1:25:72.24:960,72,0:0,0:0,0:0,0:13,12:0:37.00:0	-
1_11009703_C/T	1	11009703	T	ENSG00000175262	ENST00000377004	Transcript	NON_SYNONYMOUS_CODING	1268	1268	423	R/Q	cGg/cAg	-	ENSP=ENSP00000366203;PolyPhen=benign(0.001);SIFT=tolerated(0.81);HGNC=C1orf127	C	T/T,T/T	C	C	C	N/N,N/N	rs1281012	0.92	CpG	-6.39	0.000	0.003	867	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.25;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=57;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=-6.39;HRun=0;HaplotypeScore=1.9955;MQ=36.73;MQ0=0;Map20=1;OAnc=C;QD=38.42;TS=HPGOMC;TSseq=C,C,C,C,T,T;bSC=867;mSC=0.000;pSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1454,111,0:0,0:0,0:0,0:21,16:0:36.73:0;1/1:20:60.18:760,60,0:0,0:0,0:0,0:10,10:0:36.49:0	-
1_12198362_C/A	1	12198362	A	ENSG00000120949	ENST00000263932	Transcript	NON_SYNONYMOUS_CODING	1634	1412	471	T/N	aCc/aAc	-	ENSP=ENSP00000263932;PolyPhen=benign(0.36);SIFT=tolerated(0.15);HGNC=TNFRSF8	C	A/A,A/A	C	C	C	N/N,N/N	rs144498730	0.99	.	1.55	0.494	0.005	889	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=C;DP=61;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=1.55;HRun;HaplotypeScore=0.0000;MQ=39.14;MQ0=0;Map20=1;OAnc=C;QD=36.10;TS=HPGOMC;TSseq=C,C,C,C,N,T;bSC=889;mSC=0.494;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1513,120,0:24,16:0,0:0,0:0,0:0:39.14:0;1/1:20:60.19:791,60,0:9,11:0,0:0,0:0,0:0:37.00:0	+
1_19166893_C/T	1	19166893	T	ENSG00000179002	ENST00000375371	Transcript	NON_SYNONYMOUS_CODING	1742	1720	574	A/T	Gcc/Acc	-	ENSP=ENSP00000364520;PolyPhen=benign(0.012);SIFT=tolerated(0.59);HGNC=TAS1R2	C	T/T,T/T	C	C	C	N/N,N/N	rs6662276	0.93	CpG	-2.4	0.000	.	835	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.08;AMR_AF=0.02;AN=4;ASN_AF=0.11;CAnc=C;CpG;DP=60;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=-2.4;HRun=0;HaplotypeScore=0.0000;MQ=37.65;MQ0=0;Map20=1;OAnc=C;QD=37.57;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=835;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1761,135,0:0,0:0,0:0,0:26,20:0:37.65:0;1/1:14:42.14:559,42,0:0,0:0,0:0,0:8,6:0:37.00:0	-
1_19775375_G/A	1	19775375	A	ENSG00000077549	ENST00000264203	Transcript	NON_SYNONYMOUS_CODING	528	34	12	R/C	Cgc/Tgc	-	ENSP=ENSP00000264203;PolyPhen=benign(0.002);SIFT=deleterious(0.03);HGNC=CAPZB	G	A/A,A/A	G	G	G	N/N,N/N	rs79308175	0.92	CpG	1.17	0.027	0.018	739	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.15;AMR_AF=0.03;AN=4;ASN_AF=0.13;CAnc=G;CpG;DP=63;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=1.17;HRun;HaplotypeScore=0.9933;MQ=39.77;MQ0=0;Map20=1;OAnc=G;QD=38.00;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=739;mSC=0.027;pSC=0.018	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1629,123,0:26,15:0,0:0,0:0,0:0:39.77:0;1/1:21:63.21:834,63,0:8,13:0,0:0,0:0,0:0:37.00:0	-
1_20233086_G/A	1	20233086	A	ENSG00000169914	ENST00000375120	Transcript	NON_SYNONYMOUS_CODING	998	997	333	A/T	Gca/Aca	-	ENSP=ENSP00000364261;PolyPhen=benign(0.012);SIFT=tolerated(0.14);HGNC=OTUD3	G	A/A,A/A	G	G	G	N/N,N/N	rs10916668	0.95	.	3.67	0.995	0.458	717	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.01;AMR_AF=0.12;AN=4;ASN_AF=0.03;BaseQRankSum=-0.619;CAnc=G;DP=87;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=3.67;HRun=3;HaplotypeScore=0.0000;MQ=37.53;MQ0=0;MQRankSum=0.433;Map20=1;OAnc=G;QD=37.46;ReadPosRankSum=-1.114;TS=HPGOMC;TSseq=G,G,-,G,G,G;UR;bSC=717;mSC=0.995;pSC=0.458	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2131,129,0:37,18:0,0:1,0:0,0:0:37.53:0;1/1:31:93.30:1222,93,0:19,12:0,0:0,0:0,0:0:37.00:0	+
1_20971008_C/G	1	20971008	G	ENSG00000158828	ENST00000321556	Transcript	NON_SYNONYMOUS_CODING	896	802	268	L/V	Cta/Gta	-	ENSP=ENSP00000364204;PolyPhen=possibly_damaging(0.76);SIFT=tolerated(0.08);HGNC=PINK1	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	4.94	0.956	0.929	614	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=57;Dels=0.00;FS=0.000;GAnc=C;GRP=4.94;HRun=0;HaplotypeScore=1.5781;MQ=39.09;MQ0=0;Map20=1;OAnc=C;QD=38.30;TS=HPGOC;TSseq=C,C,C,C,C;UR;bSC=614;mSC=0.956;pSC=0.929	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1641,126,0:0,0:0,0:20,22:0,0:0:39.09:0;1/1:15:45.15:600,45,0:0,0:0,0:5,10:0,0:0:37.00:0	+
1_22974097_G/A	1	22974097	A	ENSG00000159189	ENST00000374637	Transcript	NON_SYNONYMOUS_CODING	806	559	187	V/I	Gtc/Atc	-	ENSP=ENSP00000363768;PolyPhen=benign(0.037);SIFT=tolerated(0.17);HGNC=C1QC	G	A/A,A/A	G	G	G	N/N,N/N	rs45487196	0.99	CpG	-3.07	0.000	0.054	761	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=G;CpG;DP=62;Dels=0.00;FS=0.000;GAnc=G;GRP=-3.07;HRun=0;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;Map20=1;OAnc=G;QD=36.99;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=761;mSC=0.000;pSC=0.054	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1365,105,0:23,13:0,0:0,0:0,0:0:37.83:0;1/1:26:78.25:1016,78,0:15,11:0,0:0,0:0,0:0:37.00:0	+
1_23689657_A/G	1	23689657	G	ENSG00000125945	ENST00000314011	Transcript	NON_SYNONYMOUS_CODING	355	218	73	V/A	gTa/gCa	-	ENSP=ENSP00000313582;PolyPhen=benign(0.003);SIFT=tolerated(0.77);HGNC=ZNF436	A	G/G,G/G	A	A	A	N/N,N/N	rs74875402	0.99	.	4.72	1.000	0.948	263	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=A;DP=90;Dels=0.00;FS=0.000;GAnc=A;GRP=4.72;HRun=0;HaplotypeScore=0.9997;MQ=39.02;MQ0=0;Map20=1;OAnc=A;QD=38.76;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=263;mSC=1.000;pSC=0.948	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2281,175,0:0,0:0,0:22,36:0,0:0:39.02:0;1/1:32:96.29:1237,96,0:0,0:0,0:16,16:0,0:0:37.00:0	-
1_24397636_A/G	1	24397636	G	ENSG00000142661	ENST00000329601	Transcript	NON_SYNONYMOUS_CODING	3284	3121	1041	F/L	Ttc/Ctc	-	ENSP=ENSP00000328415;PolyPhen=possibly_damaging(0.596);SIFT=tolerated(0.17);HGNC=MYOM3	A	G/G,G/G	A	A	A	N/N,N/N	rs16829083	0.99	.	5.54	0.986	0.793	724	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=A;DP=64;Dels=0.00;FS=0.000;GAnc=A;GRP=5.54;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.67;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=724;mSC=0.986;pSC=0.793	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1541,117,0:0,0:0,0:11,28:0,0:0:37.00:0;1/1:25:75.24:978,75,0:0,0:0,0:12,13:0,0:0:37.00:0	-
1_24684895_G/A	1	24684895	A	ENSG00000001460	ENST00000437986	Transcript	NON_SYNONYMOUS_CODING	1039	919	307	H/Y	Cat/Tat	-	ENSP=ENSP00000394930;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=C1orf201	G	A/A,A/A	G	G	G	N/N,N/N	rs74060310	0.95	.	-8.19	0.000	0.017	708	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.17;AMR_AF=0.02;AN=4;BaseQRankSum=1.397;CAnc=G;DP=71;Dels=0.00;EUR_AF=0.01;FS=3.087;GAnc=G;GRP=-8.19;HRun=0;HaplotypeScore=0.9958;MQ=37.00;MQ0=0;MQRankSum=-1.976;Map20=1;OAnc=G;QD=33.39;ReadPosRankSum=-0.659;TS=HPGOMC;TSseq=G,G,G,G,G,A;UR;bSC=708;mSC=0.000;pSC=0.017	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:65.32:1703,65,0:23,25:0,0:2,0:0,0:0:37.00:0;1/1:21:63.20:819,63,0:11,10:0,0:0,0:0,0:0:37.00:0	-
1_26371662_G/T	1	26371662	T	ENSG00000158014	ENST00000374276	Transcript	NON_SYNONYMOUS_CODING	334	97	33	L/M	Ctg/Atg	-	ENSP=ENSP00000363394;PolyPhen=possibly_damaging(0.472);SIFT=deleterious(0.05);HGNC=SLC30A2	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	-0.347	0.038	0.270	350	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=71;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.347;HRun=0;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;Map20=1;OAnc=G;QD=37.41;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=350;mSC=0.038;pSC=0.270	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1828,138,0:0,0:0,0:0,0:24,24:0:38.84:0;1/1:23:69.19:878,69,0:0,0:0,0:0,0:12,11:0:37.00:0	-
1_27682530_C/G	1	27682530	G	ENSG00000142733	ENST00000357582	Transcript	NON_SYNONYMOUS_CODING	3967	3698	1233	G/A	gGc/gCc	-	ENSP=ENSP00000350195;PolyPhen=benign(0.001);SIFT=tolerated(0.63);HGNC=MAP3K6	C	G/G,G/G	C	C	C	N/N,N/N	rs17162549	0.92	.	0.768	0.988	0.758	410	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.23;AMR_AF=0.05;AN=4;CAnc=C;DP=74;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=0.768;HRun;HaplotypeScore=0.9665;MQ=38.21;MQ0=0;Map20=1;OAnc=C;QD=38.00;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=410;mSC=0.988;pSC=0.758	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1895,144,0:0,0:0,0:24,23:0,1:0:38.21:0;1/1:25:75.22:951,75,0:0,0:0,0:15,10:0,0:0:36.60:0	-
1_32149760_C/T	1	32149760	T	ENSG00000084636	ENST00000271069	Transcript	NON_SYNONYMOUS_CODING	2595	2230	744	G/S	Ggc/Agc	-	ENSP=ENSP00000271069;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=COL16A1	C	T/T,T/T	C	C	C	N/N,N/N	rs34770879	0.98	CpG	5.49	0.968	0.385	579	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AN=4;ASN_AF=0.05;CAnc=C;CpG;DP=50;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=5.49;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.56;TS=HPGGOMC;TSseq=C,C,C,C,C,C,C,C;bSC=579;mSC=0.968;pSC=0.385	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:93.28:1203,93,0:0,0:0,0:0,0:15,17:0:37.00:0;1/1:18:54.17:707,54,0:0,0:0,0:0,0:6,12:0:37.00:0	-
1_36564142_C/G	1	36564142	G	ENSG00000171812	ENST00000303143	Transcript	NON_SYNONYMOUS_CODING	1147	1140	380	E/D	gaG/gaC	-	ENSP=ENSP00000305913;PolyPhen=unknown(0);SIFT=tolerated(0.29);HGNC=COL8A2	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	4.34	0.042	0.913	194	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=45;Dels=0.00;FS=0.000;GAnc=C;GRP=4.34;HRun=0;HaplotypeScore=2.9992;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.21;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=194;mSC=0.042;pSC=0.913	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:93.30:1228,93,0:0,1:0,0:20,11:0,1:0:37.00:0;1/1:12:36.12:480,36,0:0,0:0,0:5,7:0,0:0:37.00:0	-
1_40768344_C/T	1	40768344	T	ENSG00000049089	ENST00000372748	Transcript	NON_SYNONYMOUS_CODING	1838	1741	581	V/I	Gtt/Att	-	ENSP=ENSP00000361834;PolyPhen=benign(0.177);SIFT=tolerated(0.91);HGNC=COL9A2	C	T/T,T/T	C	C	C	N/N,N/N	rs3737821	0.94	CpG	0.495	.	0.842	712	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.20;AMR_AF=0.02;AN=4;ASN_AF=0.03;BaseQRankSum=0.609;CAnc=C;CpG;DP=52;Dels=0.00;EUR_AF=0.01;FS=3.641;GAnc=C;GRP=0.495;HRun=0;HaplotypeScore=4.9408;MQ=38.40;MQ0=0;MQRankSum=1.639;Map20=1;OAnc=C;QD=34.28;ReadPosRankSum=0.140;TS=HPGOMC;TSseq=C,C,C,C,C,T;UR;bSC=712;pSC=0.842	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:75.22:1370,75,0:0,0:1,0:0,0:17,21:0:38.40:0;1/1:13:39.12:499,39,0:0,0:0,0:0,0:8,5:0:37.00:0	-
1_44584638_A/G	1	44584638	G	ENSG00000171872	ENST00000372299	Transcript	NON_SYNONYMOUS_CODING	117	59	20	Q/R	cAg/cGg	-	ENSP=ENSP00000361373;PolyPhen=benign(0.014);SIFT=deleterious(0.04);HGNC=KLF17	A	G/G,G/G	A	A	A	N/N,N/N	.	1.0	.	1.25	0.013	0.079	633	0.5	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=A;DP=55;Dels=0.00;FS=0.000;GAnc=A;GRP=1.25;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=0.5;OAnc=A;QD=38.40;TS=HPGO;TSseq=A,A,A,A;bSC=633;mSC=0.013;pSC=0.079	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1646,126,0:0,0:0,0:20,21:0,0:0:37.00:0;1/1:13:39.12:496,39,0:0,0:0,0:7,6:0,0:0:37.00:0	+
1_46874246_C/T	1	46874246	T	ENSG00000117480	ENST00000243167	Transcript	NON_SYNONYMOUS_CODING	1151	1067	356	A/V	gCg/gTg	-	ENSP=ENSP00000243167;PolyPhen=probably_damaging(0.973);SIFT=deleterious(0.01);HGNC=FAAH	C	T/T,T/T	C	C	C	N/N,N/N	rs77101686	0.99	CpG	5.4	1.000	0.962	295	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=64;Dels=0.00;FS=0.000;GAnc=C;GRP=5.4;HRun=0;HaplotypeScore=3.9910;MQ=37.99;MQ0=0;Map20=1;OAnc=C;QD=37.47;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=295;mSC=1.000;pSC=0.962	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1906,147,0:0,0:0,0:0,0:19,31:0:37.99:0;1/1:14:42.14:560,42,0:0,0:0,0:0,0:5,9:0:37.00:0	+
1_54433353_G/T	1	54433353	T	ENSG00000116212	ENST00000319223	Transcript	NON_SYNONYMOUS_CODING	1239	1028	343	R/L	cGa/cTa	-	ENSP=ENSP00000318185;PolyPhen=benign(0);SIFT=tolerated(0.2);HGNC=LRRC42	G	T/T,T/T	G	-	G	N/N,N/N	rs35123335	0.99	CpG	-5.74	0.000	0.203	728	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=65;Dels=0.00;FS=0.000;GRP=-5.74;HRun=0;HaplotypeScore=0.9967;MQ=36.91;MQ0=0;Map20=1;OAnc=G;QD=36.18;TS=HPOM;TSseq=G,G,G,G;bSC=728;mSC=0.000;pSC=0.203	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1516,117,0:0,0:0,0:0,0:16,24:0:36.91:0;1/1:24:72.24:951,72,0:0,0:0,0:0,0:12,12:0:37.00:0	+
1_55307524_A/T	1	55307524	T	ENSG00000162398	ENST00000371273	Transcript	NON_SYNONYMOUS_CODING	1250	1235	412	Y/F	tAc/tTc	-	ENSP=ENSP00000360320;PolyPhen=benign(0.143);SIFT=tolerated(0.1);HGNC=C1orf177	A	T/T,T/T	A	A	A	N/N,N/N	.	1	RM	3.92	0.806	0.856	804	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=77;Dels=0.00;FS=0.000;GAnc=A;GRP=3.92;HRun=2;HaplotypeScore=0.0000;MQ=38.24;MQ0=0;Map20=1;OAnc=A;QD=38.78;RM;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=804;mSC=0.806;pSC=0.856	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1895,144,0:0,0:0,0:0,0:22,26:0:38.24:0;1/1:29:87.28:1150,87,0:0,0:0,0:0,0:9,20:0:37.00:0	+
1_59002282_A/C	1	59002282	C	ENSG00000162600	ENST00000358603	Transcript	NON_SYNONYMOUS_CODING	726	632	211	F/C	tTt/tGt	-	ENSP=ENSP00000351417;PolyPhen=probably_damaging(0.963);SIFT=deleterious(0);HGNC=OMA1	A	C/C,C/C	A	A	A	N/N,N/N	rs17117699	0.96	.	5.49	1.000	0.911	756	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.14;BaseQRankSum=0.940;CAnc=A;DP=94;Dels=0.00;EUR_AF=0.01;FS=2.997;GAnc=A;GRP=5.49;HRun=0;HaplotypeScore=1.9976;MQ=38.31;MQ0=0;MQRankSum=0.718;Map20=1;OAnc=A;QD=35.33;ReadPosRankSum=0.350;TS=HPGOMC;TSseq=A,N,A,A,A,A;UR;bSC=756;mSC=1.000;pSC=0.911	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2436,126,0:3,0:36,29:0,0:0,0:0:38.31:0;1/1:26:78.24:1007,78,0:0,0:14,12:0,0:0,0:0:37.00:0	-
1_59004617_G/A	1	59004617	A	ENSG00000162600	ENST00000358603	Transcript	NON_SYNONYMOUS_CODING	444	350	117	P/L	cCt/cTt	-	ENSP=ENSP00000351417;PolyPhen=benign(0.061);SIFT=tolerated(0.15);HGNC=OMA1	G	A/A,A/A	G	G	G	N/N,N/N	rs17117720	0.96	.	4.04	.	0.181	759	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.14;BaseQRankSum=1.155;CAnc=G;DP=70;Dels=0.00;EUR_AF=0.01;FS=3.324;GAnc=G;GRP=4.04;HRun;HaplotypeScore=0.9958;MQ=39.53;MQ0=0;MQRankSum=-1.042;Map20=1;OAnc=G;QD=33.71;ReadPosRankSum=-0.535;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=759;pSC=0.181	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:68.72:1584,69,0:19,25:0,0:1,1:0,0:0:39.53:0;1/1:24:72.24:954,72,0:11,13:0,0:0,0:0,0:0:37.00:0	-
1_62740264_T/C	1	62740264	C	ENSG00000132854	ENST00000371153	Transcript	NON_SYNONYMOUS_CODING	891	512	171	H/R	cAc/cGc	-	ENSP=ENSP00000360195;PolyPhen=benign(0.008);SIFT=tolerated(0.54);HGNC=KANK4	T	C/C,C/C	T	T	T	N/N,N/N	rs41309173	0.98	.	1.58	0.009	0.311	778	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.02;AN=4;CAnc=T;DP=55;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=1.58;HRun=0;HaplotypeScore=0.9958;MQ=36.69;MQ0=0;Map20=1;OAnc=T;QD=35.94;TS=HPGOMC;TSseq=T,T,-,T,T,T;bSC=778;mSC=0.009;pSC=0.311	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:93.29:1219,93,0:0,0:14,19:0,0:0,0:0:36.69:0;1/1:22:66.21:858,66,0:0,0:9,13:0,0:0,0:0:37.00:0	-
1_67558718_G/T	1	67558718	T	ENSG00000203963	ENST00000371006	Transcript	NON_SYNONYMOUS_CODING	1194	1173	391	N/K	aaC/aaA	-	ENSP=ENSP00000360045;PolyPhen=benign(0.002);SIFT=deleterious(0.05);HGNC=C1orf141	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	-1.6	0.000	0.015	765	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=125;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.6;HRun=3;HaplotypeScore=0.0000;MQ=38.01;MQ0=0;Map20=1;OAnc=G;QD=38.86;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=765;mSC=0.000;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:88:99:3420,262,0:0,0:0,0:0,0:27,60:0:38.01:0;1/1:37:99:1468,111,0:0,0:0,0:0,0:12,25:0:37.00:0	-
1_85589842_A/G	1	85589842	G	ENSG00000162643	ENST00000294664	Transcript	NON_SYNONYMOUS_CODING	2200	2020	674	T/A	Act/Gct	-	ENSP=ENSP00000294664;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=WDR63	A	G/G,G/G	A	A	A	N/N,N/N	rs17121745	0.94	.	0.436	0.345	0.081	750	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AMR_AF=0.04;AN=4;ASN_AF=0.11;BaseQRankSum=-0.423;CAnc=A;DP=79;Dels=0.00;EUR_AF=0.07;FS=3.108;GAnc=A;GRP=0.436;HRun=0;HaplotypeScore=1.9995;MQ=38.32;MQ0=0;MQRankSum=0.500;Map20=1;OAnc=A;QD=36.78;ReadPosRankSum=-0.577;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=750;mSC=0.345;pSC=0.081	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:95.42:1688,95,0:0,1:0,0:23,21:0,0:0:38.32:0;1/1:34:99:1334,102,0:0,0:0,0:13,21:0,0:0:37.00:0	+
1_91404797_G/A	1	91404797	A	ENSG00000122482	ENST00000337393	Transcript	NON_SYNONYMOUS_CODING	2355	2114	705	P/L	cCt/cTt	-	ENSP=ENSP00000337008;PolyPhen=probably_damaging(0.995);SIFT=tolerated(0.07);HGNC=ZNF644	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	2.32	0.003	0.315	386	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=70;Dels=0.00;FS=0.000;GAnc=G;GRP=2.32;HRun;HaplotypeScore=1.9955;MQ=38.15;MQ0=0;Map20=1;OAnc=G;QD=36.82;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=386;mSC=0.003;pSC=0.315	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1616,123,0:18,25:0,0:0,0:0,0:0:38.15:0;1/1:27:81.27:1073,81,0:11,16:0,0:0,0:0,0:0:37.00:0	-
1_110034074_G/A	1	110034074	A	ENSG00000162650	ENST00000369869	Transcript	NON_SYNONYMOUS_CODING	1231	770	257	R/H	cGt/cAt	-	ENSP=ENSP00000358885;PolyPhen=benign(0.26);SIFT=deleterious(0);HGNC=ATXN7L2	G	A/A,A/A	G	G	G	N/N,N/N	rs143266660	1.0	CpG	4.42	1.000	0.940	238	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=4.42;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.44;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=238;mSC=1.000;pSC=0.940	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:90.29:1186,90,0:17,13:0,0:0,0:0,0:0:37.00:0;1/1:22:66.18:843,66,0:12,10:0,0:0,0:0,0:0:37.00:0	+
1_117249108_A/G	1	117249108	G	ENSG00000203864	ENST00000369482	Transcript	NON_SYNONYMOUS_CODING	269	251	84	Q/R	cAg/cGg	-	ENSP=ENSP00000358494;PolyPhen=benign(0.166);HGNC=C1orf137	A	G/G,G/G	A	A	A	N/N,N/N	rs41503345	0.95	.	-2.22	0.000	0.042	911	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.22;AMR_AF=0.02;AN=4;CAnc=A;DP=86;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.22;HRun=2;HaplotypeScore=0.0000;MQ=39.21;MQ0=0;Map20=1;OAnc=A;QD=38.05;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=911;mSC=0.000;pSC=0.042	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2050,157,0:0,1:0,0:24,28:0,0:0:39.21:0;1/1:33:59.30:1182,59,0:0,1:0,0:18,14:0,0:0:37.00:0	+
1_117576550_G/A	1	117576550	A	ENSG00000134256	ENST00000256652	Transcript	NON_SYNONYMOUS_CODING	2951	2893	965	V/I	Gtc/Atc	-	ENSP=ENSP00000256652;PolyPhen=benign(0.003);SIFT=tolerated(0.48);HGNC=CD101	G	A/A,A/A	G	G	G	N/N,N/N	rs12097758	1.0	CpG	-7.52	0.000	0.816	844	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=89;Dels=0.00;FS=0.000;GAnc=G;GRP=-7.52;HRun=0;HaplotypeScore=1.9329;MQ=39.36;MQ0=0;Map20=1;OAnc=G;QD=35.81;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=844;mSC=0.000;pSC=0.816	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2253,175,0:26,36:0,0:0,0:0,0:0:39.36:0;1/1:27:81.26:1054,81,0:15,12:0,0:0,0:0,0:0:37.00:0	+
1_118516082_A/T	1	118516082	T	ENSG00000155761	ENST00000336338	Transcript	NON_SYNONYMOUS_CODING	6173	6107	2036	L/Q	cTg/cAg	-	ENSP=ENSP00000337804;PolyPhen=benign(0.03);SIFT=tolerated(0.52);HGNC=SPAG17	A	T/T,T/T	A	A	A	N/N,N/N	rs61729968	0.94	.	-0.573	0.341	0.058	448	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.15;AMR_AF=0.02;AN=4;ASN_AF=0.08;BaseQRankSum=1.347;CAnc=A;DP=89;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=-0.573;HRun=0;HaplotypeScore=0.9947;MQ=38.08;MQ0=0;MQRankSum=0.385;Map20=1;OAnc=A;QD=36.83;ReadPosRankSum=-0.834;TS=HPGOMC;TSseq=A,A,G,A,A,A;bSC=448;mSC=0.341;pSC=0.058	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2059,123,0:0,1:0,0:0,0:23,30:0:38.08:0;1/1:34:99:1350,102,0:0,0:0,0:0,0:18,16:0:37.00:0	-
1_118516181_G/C	1	118516181	C	ENSG00000155761	ENST00000336338	Transcript	NON_SYNONYMOUS_CODING	6074	6008	2003	A/G	gCa/gGa	-	ENSP=ENSP00000337804;PolyPhen=benign(0.003);SIFT=tolerated(0.39);HGNC=SPAG17	G	C/C,C/C	G	G	G	N/N,N/N	rs74114950	0.98	.	0.931	0.550	0.015	448	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=G;DP=87;Dels=0.01;FS=0.000;GAnc=G;GRP=0.931;HRun;HaplotypeScore=3.8993;MQ=38.16;MQ0=0;Map20=1;OAnc=G;QD=37.40;TS=HPGOMC;TSseq=G,G,G,G,T,G;bSC=448;mSC=0.550;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1940,150,0:0,0:27,22:0,0:0,0:0:38.16:0;1/1:36:99:1397,108,0:0,0:20,16:0,0:0,0:0:36.72:0	-
1_149906167_T/G	1	149906167	G	ENSG00000014914	ENST00000361405	Transcript	NON_SYNONYMOUS_CODING	851	600	200	E/D	gaA/gaC	-	ENSP=ENSP00000354941;PolyPhen=possibly_damaging(0.861);SIFT=tolerated(0.15);HGNC=MTMR11	T	G/G,G/G	T	T	T	N/N,N/N	rs41302101	0.96	.	3.81	1.000	0.949	188	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.04;AN=4;CAnc=T;DP=93;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=T;GRP=3.81;HRun=0;HaplotypeScore=1.9995;MQ=39.09;MQ0=0;Map20=1;OAnc=T;QD=37.63;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=188;mSC=1.000;pSC=0.949	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2140,166,0:0,1:0,0:24,31:0,0:0:39.09:0;1/1:37:99:1268,99,0:0,2:0,0:13,21:1,0:0:37.00:0	-
1_156641597_T/C	1	156641597	C	ENSG00000132688	ENST00000368223	Transcript	NON_SYNONYMOUS_CODING	2516	2383	795	I/V	Ata/Gta	-	ENSP=ENSP00000357206;PolyPhen=benign(0.008);SIFT=tolerated(0.26);HGNC=NES	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-3.87	0.014	0.088	688	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.561;CAnc=T;DP=62;Dels=0.00;FS=3.025;GAnc=T;GRP=-3.87;HRun;HaplotypeScore=0.9997;MQ=38.41;MQ0=0;MQRankSum=-0.502;Map20=1;OAnc=T;QD=35.18;ReadPosRankSum=-1.093;TS=HPGOMC;TSseq=T,T,T,T,T,C;UR;bSC=688;mSC=0.014;pSC=0.088	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:53.90:1510,54,0:0,0:18,22:0,0:0,2:0:38.41:0;1/1:20:60.19:778,60,0:0,0:7,13:0,0:0,0:0:37.00:0	-
1_158263379_A/G	1	158263379	G	ENSG00000158481	ENST00000368169	Transcript	NON_SYNONYMOUS_CODING	1316	1024	342	I/V	Ata/Gta	-	ENSP=ENSP00000357151;PolyPhen=benign(0);SIFT=tolerated(0.07);HGNC=CD1C	A	G/G,G/G	A	A	A	N/N,N/N	rs3138106	0.97	.	-5.1	0.000	0.279	878	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;BaseQRankSum=-0.348;CAnc=A;DP=106;Dels=0.00;FS=0.000;GAnc=A;GRP=-5.1;HRun=0;HaplotypeScore=0.9997;MQ=39.47;MQ0=0;MQRankSum=-0.812;Map20=1;OAnc=A;QD=35.31;ReadPosRankSum=-0.232;TS=HPGO;TSseq=A,A,A,A;UR;bSC=878;mSC=0.000;pSC=0.279	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:71:96.32:2540,96,0:1,3:0,0:29,38:0,0:0:39.47:0;1/1:35:99:1384,105,0:0,0:0,0:13,22:0,0:0:37.00:0	+
1_158576472_C/T	1	158576472	T	ENSG00000198967	ENST00000361284	Transcript	NON_SYNONYMOUS_CODING	244	244	82	L/F	Ctc/Ttc	-	ENSP=ENSP00000354707;PolyPhen=probably_damaging(0.995);SIFT=deleterious(0);HGNC=OR10Z1	C	T/T,T/T	C	C	C	N/N,N/N	rs76424590	0.97	.	5.36	0.992	0.055	580	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.13;AMR_AF=0.01;AN=4;BaseQRankSum=1.481;CAnc=C;DP=76;Dels=0.00;FS=0.000;GAnc=C;GRP=5.36;HRun;HaplotypeScore=3.9989;MQ=38.24;MQ0=0;MQRankSum=-0.404;Map20=1;OAnc=C;QD=33.88;ReadPosRankSum=-0.027;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=580;mSC=0.992;pSC=0.055	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:58.43:1659,58,0:0,0:1,1:0,0:16,29:0:38.24:0;1/1:28:84.27:1106,84,0:0,0:0,0:0,0:11,17:0:37.00:0	+
1_158648324_C/T	1	158648324	T	ENSG00000163554	ENST00000368147	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	817	679	227	E/K	Gaa/Aaa	-	ENSP=ENSP00000357129;PolyPhen=benign(0.008);SIFT=deleterious(0.03);HGNC=SPTA1	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	.	3.75	0.906	0.007	603	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;DP=88;Dels=0.00;FS=0.000;GAnc=C;GRP=3.75;HRun=4;HaplotypeScore=0.9894;MQ=38.12;MQ0=0;Map20=1;OAnc=C;QD=38.77;TS=HPGOMC;TSseq=C,C,C,C,C,T;bSC=603;mSC=0.906;pSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2088,160,0:0,0:0,0:0,0:32,21:0:38.12:0;1/1:35:99:1349,105,0:0,0:0,0:0,0:19,16:0:37.00:0	-
1_160801172_G/A	1	160801172	A	ENSG00000122223	ENST00000322302	Transcript	NON_SYNONYMOUS_CODING	810	787	263	R/C	Cgc/Tgc	-	ENSP=ENSP00000313619;PolyPhen=probably_damaging(0.999);SIFT=deleterious(0);HGNC=CD244	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	3.69	0.836	0.266	789	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=87;Dels=0.00;FS=0.000;GAnc=G;GRP=3.69;HRun=0;HaplotypeScore=1.9786;MQ=39.69;MQ0=0;Map20=1;OAnc=G;QD=39.15;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=789;mSC=0.836;pSC=0.266	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2147,163,0:27,27:0,0:0,0:0,0:0:39.69:0;1/1:33:99:1311,99,0:17,16:0,0:0,0:0,0:0:37.00:0	-
1_160811488_T/C	1	160811488	C	ENSG00000122223	ENST00000322302	Transcript	NON_SYNONYMOUS_CODING	288	265	89	N/D	Aac/Gac	-	ENSP=ENSP00000313619;PolyPhen=benign(0.176);SIFT=tolerated(0.6);HGNC=CD244	T	C/C,C/C	T	T	T	N/N,N/N	rs34846692	0.96	.	-4.72	0.000	0.004	789	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.14;AMR_AF=0.02;AN=4;CAnc=T;DP=87;Dels=0.00;FS=0.000;GAnc=T;GRP=-4.72;HRun;HaplotypeScore=0.9867;MQ=39.39;MQ0=0;Map20=1;OAnc=T;QD=38.09;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=789;mSC=0.000;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2356,184,0:0,0:35,25:0,0:0,0:0:39.39:0;1/1:26:78.24:1001,78,0:0,0:17,9:0,0:0,0:0:37.00:0	-
1_161680518_T/A	1	161680518	A	ENSG00000132185	ENST00000540926	Transcript	NON_SYNONYMOUS_CODING	386	93	31	F/L	ttT/ttA	-	ENSP=ENSP00000446380;PolyPhen=benign(0.006);SIFT=tolerated(0.66);HGNC=FCRLA	T	A/A,A/A	T	T	T	N/N,N/N	rs61801161	0.95	.	-0.913	0.012	0.466	775	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.04;AMR_AF=0.02;AN=4;ASN_AF=0.07;CAnc=T;DP=76;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=-0.913;HRun=0;HaplotypeScore=0.0000;MQ=37.69;MQ0=0;Map20=1;OAnc=T;QD=38.08;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=775;mSC=0.012;pSC=0.466	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1670,129,0:19,24:0,0:0,0:0,0:0:37.69:0;1/1:33:96.30:1234,96,0:13,20:0,0:0,0:0,0:0:36.89:0	+
1_169799880_G/T	1	169799880	T	ENSG00000000460	ENST00000286031	Transcript	NON_SYNONYMOUS_CODING	2141	1441	481	A/S	Gct/Tct	-	ENSP=ENSP00000286031;PolyPhen=probably_damaging(0.975);SIFT=deleterious(0);HGNC=C1orf112	G	T/T,T/T	G	G	G	N/N,N/N	rs2272920	0.95	.	6.05	1.000	0.547	485	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.01;AMR_AF=0.06;AN=4;ASN_AF=0.01;CAnc=G;DP=71;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=G;GRP=6.05;HRun=0;HaplotypeScore=0.0000;MQ=37.73;MQ0=0;Map20=1;OAnc=G;QD=37.87;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=485;mSC=1.000;pSC=0.547	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1586,120,0:0,0:0,0:0,0:14,27:0:37.73:0;1/1:30:90.28:1143,90,0:0,0:0,0:0,0:10,20:0:37.00:0	+
1_176668611_A/G	1	176668611	G	ENSG00000116183	ENST00000367662	Transcript	NON_SYNONYMOUS_CODING	4286	3122	1041	H/R	cAc/cGc	-	ENSP=ENSP00000356634;PolyPhen=benign(0.006);SIFT=tolerated(0.25);HGNC=PAPPA2	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-4.03	0.006	0.911	679	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.846;CAnc=A;DP=72;Dels=0.00;FS=3.324;GAnc=A;GRP=-4.03;HRun=0;HaplotypeScore=5.9211;MQ=37.69;MQ0=0;MQRankSum=-0.524;Map20=1;OAnc=A;QD=36.37;ReadPosRankSum=-0.363;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=679;mSC=0.006;pSC=0.911	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.40:1597,89,0:1,0:0,0:19,22:0,0:0:37.69:0;1/1:29:47.26:1017,47,0:0,1:0,0:14,14:0,0:0:37.00:0	+
1_182787951_C/T	1	182787951	T	ENSG00000135838	ENST00000445965	Transcript	NON_SYNONYMOUS_CODING	536	356	119	T/I	aCt/aTt	-	ENSP=ENSP00000414118;PolyPhen=possibly_damaging(0.697);SIFT=deleterious(0.04);HGNC=NPL	C	T/T,T/T	C	C	C	N/N,N/N	rs10911142	0.93	.	4.57	1.000	0.755	434	0.5	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.25;AMR_AF=0.04;AN=4;CAnc=C;DP=91;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=4.57;HRun;HaplotypeScore=0.0000;MQ=37.37;MQ0=2;Map20=0.5;OAnc=C;QD=37.92;TS=HPGOMC;TSseq=C,C,-,C,C,C;bSC=434;mSC=1.000;pSC=0.755	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1929,147,0:0,0:0,0:0,0:17,33:0:37.37:0;1/1:41:99:1530,117,0:0,0:1,0:0,0:17,23:0:35.80:2	+
1_186134246_A/T	1	186134246	T	ENSG00000143341	ENST00000271588	Transcript	NON_SYNONYMOUS_CODING	15489	15260	5087	D/V	gAt/gTt	-	ENSP=ENSP00000271588;PolyPhen=possibly_damaging(0.634);HGNC=HMCN1	A	T/T,T/T	A	A	A	N/N,N/N	rs41317507	0.92	.	5.27	1.000	0.591	644	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.26;AMR_AF=0.05;AN=4;ASN_AF=0.02;CAnc=A;DP=72;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=5.27;HRun;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;Map20=1;OAnc=A;QD=37.59;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=644;mSC=1.000;pSC=0.591	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1837,141,0:0,0:0,0:0,0:28,20:0:38.84:0;1/1:24:72.24:957,72,0:0,0:0,0:0,0:11,13:0:37.00:0	+
1_197396761_G/A	1	197396761	A	ENSG00000134376	ENST00000367397	Transcript	NON_SYNONYMOUS_CODING	1307	449	150	R/H	cGc/cAc	-	ENSP=ENSP00000356367;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CRB1	G	A/A,A/A	G	G	A	N/N,N/N	rs62636287	0.99	CpG	0.558	0.038	0.204	321	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.05;CAnc=G;CpG;DP=70;Dels=0.00;FS=0.000;GAnc=G;GRP=0.558;HRun=0;HaplotypeScore=0.9997;MQ=38.44;MQ0=0;Map20=1;OAnc=A;QD=35.88;TS=HPGOMC;TSseq=G,G,G,A,A,A;UR;bSC=321;mSC=0.038;pSC=0.204	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1504,114,0:21,20:0,0:0,0:0,0:0:38.44:0;1/1:29:87.28:1146,87,0:14,15:0,0:0,0:0,0:0:37.00:0	+
1_198668761_G/C	1	198668761	C	ENSG00000081237	ENST00000271610	Transcript	NON_SYNONYMOUS_CODING	655	484	162	D/H	Gac/Cac	-	ENSP=ENSP00000271610;PolyPhen=probably_damaging(0.973);SIFT=deleterious(0.02);HGNC=PTPRC	G	C/C,C/C	G	G	G	N/N,N/N	rs41269905	0.99	.	3.27	0.046	0.504	766	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;CAnc=G;DP=50;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=3.27;HRun=0;HaplotypeScore=0.0000;MQ=37.88;MQ0=0;Map20=1;OAnc=G;QD=37.95;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=766;mSC=0.046;pSC=0.504	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1323,102,0:0,0:17,17:0,0:0,0:0:37.88:0;1/1:16:48.15:623,48,0:0,0:7,9:0,0:0,0:0:37.00:0	+
1_200842641_C/T	1	200842641	T	ENSG00000170128	ENST00000304244	Transcript	NON_SYNONYMOUS_CODING	559	476	159	S/L	tCg/tTg	-	ENSP=ENSP00000301917;PolyPhen=benign(0.049);SIFT=tolerated(0.29);HGNC=GPR25	C	T/T,T/T	C	C	C	N/N,N/N	rs144298915	0.99	CpG	2.5	0.000	0.964	586	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=36;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=2.5;HRun;HaplotypeScore=0.9997;MQ=38.19;MQ0=0;Map20=1;OAnc=C;QD=38.27;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=586;mSC=0.000;pSC=0.964	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:25:75.24:990,75,0:0,0:0,0:0,0:17,8:0:38.19:0;1/1:11:33.10:429,33,0:0,0:0,0:0,0:5,6:0:37.00:0	+
1_202128493_G/A	1	202128493	A	ENSG00000143851	ENST00000308986	Transcript	NON_SYNONYMOUS_CODING	169	38	13	P/L	cCg/cTg	-	ENSP=ENSP00000311133;PolyPhen=benign(0.001);SIFT=tolerated(0.15);HGNC=PTPN7	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	-0.821	0.013	0.013	856	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.821;HRun=0;HaplotypeScore=1.9995;MQ=40.39;MQ0=0;Map20=1;OAnc=G;QD=38.00;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=856;mSC=0.013;pSC=0.013	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1325,102,0:17,16:0,0:0,0:0,0:0:40.39:0;1/1:20:60.19:783,60,0:11,9:0,0:0,0:0,0:0:37.00:0	-
1_202130700_G/A	1	202130700	A	ENSG00000143851	ENST00000477554	Transcript	NON_SYNONYMOUS_CODING	10	10	4	R/C	Cgt/Tgt	-	ENSP=ENSP00000418416;PolyPhen=unknown(0);HGNC=PTPN7	G	A/A,A/A	G	G	G	N/N,N/N	rs73085642	0.96	CpG	0.808	0.000	0.107	845	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=69;Dels=0.00;FS=0.000;GAnc=G;GRP=0.808;HRun=0;HaplotypeScore=0.0000;MQ=39.20;MQ0=0;Map20=1;OAnc=G;QD=34.40;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=845;mSC=0.000;pSC=0.107	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1409,105,0:17,23:0,0:0,0:0,0:0:39.20:0;1/1:29:87.28:1131,87,0:18,11:0,0:0,0:0,0:0:37.00:0	-
1_202287754_G/A	1	202287754	A	ENSG00000133067	ENST00000255432	Transcript	NON_SYNONYMOUS_CODING	2251	2167	723	V/M	Gtg/Atg	-	ENSP=ENSP00000255432;PolyPhen=possibly_damaging(0.556);SIFT=tolerated(0.44);HGNC=LGR6	G	A/A,A/A	G	G	G	N/N,N/N	rs75658797	0.91	CpG	2.58	0.020	0.982	534	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.08;AMR_AF=0.12;AN=4;ASN_AF=0.06;CAnc=G;CpG;DP=54;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=G;GRP=2.58;HRun=0;HaplotypeScore=0.0000;MQ=38.68;MQ0=0;Map20=1;OAnc=G;QD=37.38;TS=HPGOMC;TSseq=G,G,G,G,-,G;UR;bSC=534;mSC=0.020;pSC=0.982	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1341,102,0:14,21:0,0:0,0:0,0:0:38.68:0;1/1:19:57.18:733,57,0:12,7:0,0:0,0:0,0:0:37.00:0	+
1_203767822_T/G	1	203767822	G	ENSG00000257315	ENST00000550078	Transcript	NON_SYNONYMOUS_CODING	2386	1172	391	L/R	cTg/cGg	-	ENSP=ENSP00000447879;PolyPhen=benign(0.037);SIFT=tolerated(0.09);HGNC=ZBED6	T	G/G,G/G	T	T	T	N/N,N/N	rs6697388	0.91	.	-2.73	0.000	0.617	499	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.09;AMR_AF=0.08;AN=4;ASN_AF=0.04;CAnc=T;DP=80;Dels=0.00;EUR_AF=0.13;FS=0.000;GAnc=T;GRP=-2.73;HRun;HaplotypeScore=0.0000;MQ=38.77;MQ0=0;Map20=1;OAnc=T;QD=38.48;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=499;mSC=0.000;pSC=0.617	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1957,147,0:0,0:0,0:30,20:0,0:0:38.77:0;1/1:30:87.26:1128,87,0:0,1:0,0:14,15:0,0:0:37.00:0	+
1_207134410_T/G	1	207134410	G	ENSG00000162897	ENST00000324852	Transcript	NON_SYNONYMOUS_CODING	1286	811	271	T/P	Acc/Ccc	-	ENSP=ENSP00000316491;PolyPhen=probably_damaging(0.965);SIFT=deleterious(0);HGNC=FCAMR	T	G/G,G/G	T	T	T	N/N,N/N	rs3813953	0.99	.	-2	0.000	0.713	609	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.04;BaseQRankSum=0.053;CAnc=T;DP=59;Dels=0.00;FS=3.590;GAnc=T;GRP=-2;HRun=2;HaplotypeScore=0.5784;MQ=37.00;MQ0=0;MQRankSum=-1.313;Map20=1;OAnc=T;QD=34.97;ReadPosRankSum=-0.998;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=609;mSC=0.000;pSC=0.713	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:56.31:1187,56,0:0,0:0,0:13,19:1,0:0:37.00:0;1/1:26:75.25:1000,75,0:0,0:0,0:16,10:0,0:0:37.00:0	-
1_207196760_A/G	1	207196760	G	ENSG00000182795	ENST00000359470	Transcript	NON_SYNONYMOUS_CODING	599	349	117	S/P	Tcc/Ccc	-	ENSP=ENSP00000352447;PolyPhen=benign(0.004);SIFT=tolerated(0.28);HGNC=C1orf116	A	G/G,G/G	A	A	A	N/N,N/N	rs77877052	1.0	.	-1.95	0.000	0.163	572	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=A;DP=58;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.95;HRun=3;HaplotypeScore=4.8930;MQ=39.14;MQ0=0;Map20=1;OAnc=A;QD=37.42;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=572;mSC=0.000;pSC=0.163	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1567,120,0:0,0:0,0:17,23:0,0:0:39.14:0;1/1:17:51.17:680,51,0:0,0:0,0:4,13:0,0:0:37.00:0	-
1_208041366_T/C	1	208041366	C	ENSG00000203709	ENST00000415882	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	126	127	43	K/E	Aaa/Gaa	-	ENSP=ENSP00000390224;PolyPhen=benign(0.004);HGNC=C1orf132	T	C/C,C/C	T	T	T	N/N,N/N	rs74821401	0.96	.	2.29	1.000	0.326	889	0	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.04;AN=4;ASN_AF=0.06;BaseQRankSum=0.072;CAnc=T;DP=74;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=2.29;HRun;HaplotypeScore=0.6651;MQ=37.00;MQ0=0;MQRankSum=-1.588;Map20=0;OAnc=T;QD=35.88;ReadPosRankSum=0.000;TS=HPGOMC;TSseq=T,T,T,N,T,C;UR;bSC=889;mSC=1.000;pSC=0.326	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1791,104,0:0,0:30,17:0,0:2,0:0:37.00:0;1/1:25:72.22:914,72,0:0,0:14,10:0,0:0,1:0:37.00:0	-
1_209791929_G/T	1	209791929	T	ENSG00000196878	ENST00000356082	Transcript	NON_SYNONYMOUS_CODING	2912	2777	926	A/D	gCt/gAt	-	ENSP=ENSP00000348384;PolyPhen=probably_damaging(0.998);SIFT=deleterious(0.01);HGNC=LAMB3	G	T/T,T/T	G	G	G	N/N,N/N	rs2076222	0.92	.	4.1	0.008	0.745	819	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AMR_AF=0.06;AN=4;ASN_AF=0.24;CAnc=G;DP=68;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=4.1;HRun=0;HaplotypeScore=0.9997;MQ=37.27;MQ0=0;Map20=1;OAnc=G;QD=38.94;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=819;mSC=0.008;pSC=0.745	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1668,126,0:0,0:0,0:0,0:13,27:0:37.27:0;1/1:26:78.25:1021,78,0:0,0:0,0:0,0:18,8:0:37.00:0	-
1_209807815_T/C	1	209807815	C	ENSG00000196878	ENST00000356082	Transcript	NON_SYNONYMOUS_CODING	676	541	181	N/D	Aat/Gat	-	ENSP=ENSP00000348384;PolyPhen=benign(0.032);SIFT=tolerated(0.36);HGNC=LAMB3	T	C/C,C/C	T	T	T	N/N,N/N	rs2235542	0.92	.	3.42	0.063	0.789	845	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.08;AMR_AF=0.06;AN=4;ASN_AF=0.23;CAnc=T;DP=57;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=3.42;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.42;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=845;mSC=0.063;pSC=0.789	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:90.29:1186,90,0:0,0:13,16:0,0:0,0:0:37.00:0;1/1:27:81.26:1071,81,0:0,0:14,13:0,0:0,0:0:37.00:0	-
1_215799170_T/C	1	215799170	C	ENSG00000042781	ENST00000307340	Transcript	NON_SYNONYMOUS_CODING	15949	15562	5188	S/G	Agc/Ggc	-	ENSP=ENSP00000305941;PolyPhen=benign(0.139);SIFT=tolerated(0.11);HGNC=USH2A	T	C/C,C/C	T	T	T	N/N,N/N	rs58257972	0.99	.	5.93	1.000	0.861	563	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.05;CAnc=T;DP=92;Dels=0.00;FS=0.000;GAnc=T;GRP=5.93;HRun;HaplotypeScore=1.9989;MQ=38.12;MQ0=0;Map20=1;OAnc=T;QD=38.08;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=563;mSC=1.000;pSC=0.861	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2051,160,0:0,0:31,22:0,0:0,0:0:38.12:0;1/1:39:77.36:1441,77,0:0,0:16,22:0,0:1,0:0:37.00:0	-
1_223947081_A/G	1	223947081	G	ENSG00000162909	ENST00000295006	Transcript	NON_SYNONYMOUS_CODING	1736	1427	476	K/R	aAg/aGg	-	ENSP=ENSP00000295006;PolyPhen=benign(0.026);SIFT=tolerated(1);HGNC=CAPN2	A	G/G,G/G	A	A	A	N/N,N/N	rs9804140	0.94	.	3.33	0.995	0.882	679	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.18;AMR_AF=0.01;AN=4;ASN_AF=0.08;CAnc=A;DP=73;Dels=0.00;FS=0.000;GAnc=A;GRP=3.33;HRun;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;OAnc=A;QD=37.70;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=679;mSC=0.995;pSC=0.882	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1692,132,0:0,0:0,0:21,23:0,0:0:37.68:0;1/1:29:87.28:1139,87,0:0,0:0,0:13,16:0,0:0:37.00:0	+
1_227068398_G/T	1	227068398	T	ENSG00000143801	ENST00000366782	Transcript	NON_SYNONYMOUS_CODING	552	52	18	A/S	Gcc/Tcc	-	ENSP=ENSP00000355746;PolyPhen=benign(0.006);SIFT=tolerated(0.2);HGNC=PSEN2	G	T/T,T/T	G	G	G	N/N,N/N	rs111567390	0.91	.	-1.42	0.000	0.011	703	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.29;AMR_AF=0.07;AN=4;ASN_AF=0.05;BaseQRankSum=0.898;CAnc=G;DP=87;Dels=0.00;FS=3.174;GAnc=G;GRP=-1.42;HRun=0;HaplotypeScore=3.5776;MQ=37.00;MQ0=0;MQRankSum=0.962;Map20=1;OAnc=G;QD=35.53;ReadPosRankSum=0.898;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=703;mSC=0.000;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2058,123,0:0,0:0,0:1,0:28,28:0:37.00:0;1/1:30:90.29:1183,90,0:0,0:0,0:0,0:15,15:0:37.00:0	+
1_227219076_C/T	1	227219076	T	ENSG00000143776	ENST00000334218	Transcript	NON_SYNONYMOUS_CODING	4536	3593	1198	R/H	cGc/cAc	-	ENSP=ENSP00000335341;PolyPhen=benign(0.146);SIFT=deleterious(0.04);HGNC=CDC42BPA	C	T/T,T/T	C	C	C	N/N,N/N	rs961490	0.99	CpG	5.71	1.000	0.986	461	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.04;CAnc=C;CpG;DP=73;Dels=0.00;FS=0.000;GAnc=C;GRP=5.71;HRun=0;HaplotypeScore=0.0000;MQ=38.38;MQ0=0;Map20=1;OAnc=C;QD=38.87;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=461;mSC=1.000;pSC=0.986	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1704,129,0:0,0:0,0:0,0:16,27:0:38.38:0;1/1:30:90.28:1161,90,0:0,0:0,0:0,0:14,16:0:37.00:0	-
1_227923195_C/T	1	227923195	T	ENSG00000143740	ENST00000315781	Transcript	NON_SYNONYMOUS_CODING	499	85	29	P/S	Cct/Tct	-	ENSP=ENSP00000314157;PolyPhen=possibly_damaging(0.862);SIFT=tolerated(0.57);HGNC=SNAP47	C	T/T,T/T	C	C	C	N/N,N/N	rs114487068	0.99	.	-0.938	.	0.001	670	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=C;DP=41;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-0.938;HRun=0;HaplotypeScore=0.0000;MQ=37.97;MQ0=0;Map20=1;OAnc=C;QD=35.40;TS=HPGOM;TSseq=C,C,C,C,T;bSC=670;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:26:75.23:953,75,0:0,0:0,0:0,0:16,10:0:37.97:0;1/1:15:42.13:546,42,0:0,0:0,0:0,0:8,7:0:37.00:0	+
1_231830487_C/A	1	231830487	A	ENSG00000162946	ENST00000295051	Transcript	NON_SYNONYMOUS_CODING	1036	983	328	T/N	aCc/aAc	-	ENSP=ENSP00000295051;PolyPhen=benign(0.368);SIFT=tolerated(0.37);HGNC=DISC1	C	A/A,A/A	C	C	C	N/N,N/N	rs55795950	1.0	.	4.02	0.002	0.719	828	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=C;DP=60;Dels=0.00;FS=0.000;GAnc=C;GRP=4.02;HRun;HaplotypeScore=2.9647;MQ=37.99;MQ0=0;Map20=1;OAnc=C;QD=36.02;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=828;mSC=0.002;pSC=0.719	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:84.27:1114,84,0:14,16:0,0:0,0:0,0:0:37.99:0;1/1:30:50.29:1114,50,0:18,11:0,1:0,0:0,0:0:37.00:0	+
1_232144871_A/G	1	232144871	G	ENSG00000162946	ENST00000422590	Transcript	NON_SYNONYMOUS_CODING	591	592	198	T/A	Aca/Gca	-	ENSP=ENSP00000415147;PolyPhen=unknown(0);HGNC=DISC1	A	G/G,G/G	A	A	A	N/N,N/N	rs11122391	0.93	.	-0.525	0.000	0.157	946	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.28;AMR_AF=0.02;AN=4;ASN_AF=0.02;BaseQRankSum=-1.007;CAnc=A;DP=68;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.525;HRun=0;HaplotypeScore=1.9989;MQ=39.05;MQ0=0;MQRankSum=-0.524;Map20=1;OAnc=A;QD=36.38;ReadPosRankSum=0.604;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=946;mSC=0.000;pSC=0.157	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.40:1597,89,0:1,0:0,0:27,14:0,0:0:39.05:0;1/1:25:75.25:992,75,0:0,0:0,0:13,12:0,0:0:37.00:0	+
1_232940863_G/A	1	232940863	A	ENSG00000212916	ENST00000418460	Transcript	NON_SYNONYMOUS_CODING	221	94	32	D/N	Gat/Aat	-	ENSP=ENSP00000403208;PolyPhen=possibly_damaging(0.793);SIFT=deleterious(0);HGNC=KIAA1383	G	A/A,A/A	G	G	G	N/N,N/N	rs74927351	0.97	.	1.6	0.007	0.384	788	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.10;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=1.6;HRun;HaplotypeScore=0.0000;MQ=38.16;MQ0=0;Map20=1;OAnc=G;QD=39.01;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=788;mSC=0.007;pSC=0.384	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:2022,153,0:28,22:0,0:0,0:0,0:0:38.16:0;1/1:24:72.23:948,72,0:10,14:0,0:0,0:0,0:0:37.00:0	+
1_233353901_G/A	1	233353901	A	ENSG00000135749	ENST00000258229	Transcript	NON_SYNONYMOUS_CODING	2769	2534	845	A/V	gCg/gTg	-	ENSP=ENSP00000258229;PolyPhen=possibly_damaging(0.566);SIFT=tolerated(0.08);HGNC=PCNXL2	G	A/A,A/A	G	G	G	N/N,N/N	rs74503807	0.99	CpG	5.38	0.908	0.701	893	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.02;AN=4;BaseQRankSum=1.660;CAnc=G;CpG;DP=80;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=5.38;HRun=0;HaplotypeScore=0.9973;MQ=37.62;MQ0=0;MQRankSum=-1.588;Map20=1;OAnc=G;QD=37.26;ReadPosRankSum=-0.433;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=893;mSC=0.908;pSC=0.701	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1822,113,0:22,16:0,0:0,0:0,0:0:37.62:0;1/1:32:96.32:1280,96,0:23,9:0,0:0,0:0,0:0:37.00:0	-
1_234566016_A/G	1	234566016	G	ENSG00000059588	ENST00000040877	Transcript	NON_SYNONYMOUS_CODING	2426	2426	809	V/A	gTa/gCa	-	ENSP=ENSP00000040877;PolyPhen=benign(0.002);SIFT=tolerated(0.41);HGNC=TARBP1	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	2.94	0.019	0.801	835	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=79;Dels=0.00;FS=0.000;GAnc=A;GRP=2.94;HRun=0;HaplotypeScore=0.0000;MQ=39.53;MQ0=0;Map20=1;OAnc=A;QD=36.72;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=835;mSC=0.019;pSC=0.801	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1722,132,0:0,0:0,0:18,28:0,0:0:39.53:0;1/1:33:99:1272,99,0:0,0:0,0:18,15:0,0:0:37.00:0	-
1_246942158_C/T	1	246942158	T	ENSG00000223519	ENST00000451123	Transcript	NON_SYNONYMOUS_CODING	777	322	108	V/I	Gtc/Atc	-	ENSP=ENSP00000412987;PolyPhen=benign(0.005);SIFT=tolerated(0.63)	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	-2.99	0.026	0.578	711	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=72;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.99;HRun=0;HaplotypeScore=0.9933;MQ=38.32;MQ0=0;Map20=1;OAnc=C;QD=37.17;TS=HPGOM;TSseq=C,C,C,C,-;bSC=711;mSC=0.026;pSC=0.578	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1706,132,0:0,0:0,0:0,0:25,20:0:38.32:0;1/1:27:81.26:1064,81,0:0,0:0,0:0,0:11,16:0:37.00:0	-
1_248128725_G/A	1	248128725	A	ENSG00000187080	ENST00000366480	Transcript	NON_SYNONYMOUS_CODING	191	92	31	G/D	gGt/gAt	-	ENSP=ENSP00000355436;PolyPhen=benign(0.165);SIFT=deleterious(0.02);HGNC=OR2AK2	G	A/A,A/A	G	G	G	N/N,N/N	rs74153215	0.99	.	-3	0.000	.	964	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AN=4;CAnc=G;DP=114;Dels=0.00;FS=0.000;GAnc=G;GRP=-3;HRun=0;HaplotypeScore=0.0000;MQ=37.43;MQ0=0;Map20=1;OAnc=G;QD=38.52;TS=HPGO;TSseq=G,G,G,G;bSC=964;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:69:99:2691,205,0:33,36:0,0:0,0:0,0:0:37.43:0;1/1:45:99:1744,135,0:18,27:0,0:0,0:0,0:0:37.00:0	+
1_248129501_G/A	1	248129501	A	ENSG00000187080	ENST00000366480	Transcript	NON_SYNONYMOUS_CODING	967	868	290	A/T	Gca/Aca	-	ENSP=ENSP00000355436;PolyPhen=probably_damaging(0.939);SIFT=deleterious(0.01);HGNC=OR2AK2	G	A/A,A/A	G	G	G	N/N,N/N	rs74153221	0.99	.	-3.44	0.000	.	964	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AN=4;BaseQRankSum=-1.571;CAnc=G;DP=83;Dels=0.00;FS=0.000;GAnc=G;GRP=-3.44;HRun=0;HaplotypeScore=2.9913;MQ=36.77;MQ0=0;MQRankSum=1.652;Map20=1;OAnc=G;QD=36.59;ReadPosRankSum=1.249;TS=HPGO;TSseq=G,G,G,G;bSC=964;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1643,100,0:21,20:0,0:1,0:0,0:0:36.77:0;1/1:39:99:1525,117,0:19,20:0,0:0,0:0,0:0:37.29:0	+
2_17697057_C/G	2	17697057	G	ENSG00000214842	ENST00000399080	Transcript	NON_SYNONYMOUS_CODING	2650	2626	876	V/L	Gtt/Ctt	-	ENSP=ENSP00000382030;PolyPhen=benign(0.321);SIFT=tolerated(0.24);HGNC=RAD51AP2	C	G/G,G/G	C	C	C	N/N,N/N	rs17380212	0.98	.	1.98	0.044	0.192	547	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.03;AMR_AF=0.04;AN=4;CAnc=C;DP=92;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=1.98;HRun=0;HaplotypeScore=0.0000;MQ=39.95;MQ0=0;Map20=1;OAnc=C;QD=38.02;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=547;mSC=0.044;pSC=0.192	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2276,178,0:0,0:0,0:23,36:0,0:0:39.95:0;1/1:33:99:1313,99,0:0,0:0,0:12,21:0,0:0:37.00:0	-
2_17697404_C/A	2	17697404	A	ENSG00000214842	ENST00000399080	Transcript	NON_SYNONYMOUS_CODING	2303	2279	760	S/I	aGc/aTc	-	ENSP=ENSP00000382030;PolyPhen=benign(0.263);SIFT=deleterious(0.02);HGNC=RAD51AP2	C	A/A,A/A	C	C	C	N/N,N/N	rs76177128	0.98	.	-5.04	0.000	0.048	546	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.03;AMR_AF=0.04;AN=4;CAnc=C;DP=100;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=-5.04;HRun=0;HaplotypeScore=0.9665;MQ=38.66;MQ0=0;Map20=1;OAnc=C;QD=36.28;TS=HPGOMC;TSseq=C,C,C,T,C,C;UR;bSC=546;mSC=0.000;pSC=0.048	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:71:99:2609,205,0:22,49:0,0:0,0:0,0:0:38.66:0;1/1:29:87.28:1147,87,0:11,18:0,0:0,0:0,0:0:37.00:0	-
2_17698220_G/A	2	17698220	A	ENSG00000214842	ENST00000399080	Transcript	NON_SYNONYMOUS_CODING	1487	1463	488	T/I	aCt/aTt	-	ENSP=ENSP00000382030;PolyPhen=benign(0.002);SIFT=tolerated(0.2);HGNC=RAD51AP2	G	A/A,A/A	G	G	G	N/N,N/N	rs62130405	0.98	.	-0.617	0.000	0.040	546	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.03;AMR_AF=0.04;AN=4;CAnc=G;DP=117;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=-0.617;HRun;HaplotypeScore=1.6648;MQ=40.87;MQ0=0;Map20=1;OAnc=G;QD=38.60;TS=HPGOMC;TSseq=G,G,G,G,G,A;UR;bSC=546;mSC=0.000;pSC=0.040	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:74:99:2890,220,0:21,53:0,0:0,0:0,0:0:40.87:0;1/1:43:99:1701,129,0:14,29:0,0:0,0:0,0:0:37.00:0	-
2_18766036_C/G	2	18766036	G	ENSG00000185013	ENST00000304081	Transcript	NON_SYNONYMOUS_CODING	568	467	156	W/S	tGg/tCg	-	ENSP=ENSP00000305979;PolyPhen=probably_damaging(0.998);SIFT=tolerated(0.17);HGNC=NT5C1B	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	4.21	0.276	0.356	722	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.035;CAnc=C;DP=74;Dels=0.00;FS=0.000;GAnc=C;GRP=4.21;HRun=0;HaplotypeScore=2.9992;MQ=37.40;MQ0=0;MQRankSum=-1.520;Map20=1;OAnc=C;QD=36.41;ReadPosRankSum=-1.379;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=722;mSC=0.276;pSC=0.356	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1853,107,0:0,1:0,1:23,25:0,0:0:37.40:0;1/1:24:72.23:952,72,0:0,0:0,0:16,8:0,0:0:37.00:0	-
2_21238007_G/T	2	21238007	T	ENSG00000084674	ENST00000233242	Transcript	NON_SYNONYMOUS_CODING	3762	3634	1212	L/M	Ctg/Atg	-	ENSP=ENSP00000233242;PolyPhen=benign(0.058);SIFT=deleterious(0.03);HGNC=APOB	G	T/T,T/T	G	G	G	N/N,N/N	rs61736761	0.98	.	-1.25	0.386	0.011	401	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=G;DP=71;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.25;HRun=0;HaplotypeScore=0.0000;MQ=38.29;MQ0=0;Map20=1;OAnc=G;QD=37.88;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=401;mSC=0.386;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1776,135,0:0,0:0,0:0,0:19,26:0:38.29:0;1/1:25:75.23:965,75,0:0,0:0,0:0,0:13,12:0:37.00:0	-
2_26705331_C/T	2	26705331	T	ENSG00000115155	ENST00000272371	Transcript	NON_SYNONYMOUS_CODING	1649	1522	508	V/M	Gtg/Atg	-	ENSP=ENSP00000272371;PolyPhen=probably_damaging(0.996);SIFT=deleterious(0.02);HGNC=OTOF	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	3.36	0.791	0.675	569	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.227;CAnc=C;CpG;DP=62;Dels=0.00;FS=3.802;GAnc=C;GRP=3.36;HRun=0;HaplotypeScore=0.9947;MQ=38.24;MQ0=0;MQRankSum=-1.660;Map20=1;OAnc=C;QD=37.14;ReadPosRankSum=-1.227;TS=HPGOMC;TSseq=C,C,T,C,C,C;bSC=569;mSC=0.791;pSC=0.675	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1816,100,0:0,0:1,0:0,0:19,28:0:38.24:0;1/1:14:42.13:543,42,0:0,0:0,0:0,0:4,10:0:37.00:0	-
2_31590917_T/C	2	31590917	C	ENSG00000158125	ENST00000379416	Transcript	NON_SYNONYMOUS_CODING	2156	2107	703	I/V	Ata/Gta	-	ENSP=ENSP00000368727;PolyPhen=benign(0.111);SIFT=deleterious(0.03);HGNC=XDH	T	C/C,C/C	T	T	T	N/N,N/N	rs17011368	0.95	.	4.8	0.999	0.890	605	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.14;AMR_AF=0.03;AN=4;CAnc=T;DP=87;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=4.8;HRun=0;HaplotypeScore=0.9734;MQ=38.92;MQ0=0;Map20=1;OAnc=T;QD=37.44;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=605;mSC=0.999;pSC=0.890	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1755,135,0:0,0:24,22:0,0:0,0:0:38.92:0;1/1:41:99:1612,123,0:0,0:19,22:0,0:0,0:0:37.00:0	-
2_37319156_A/C	2	37319156	C	ENSG00000152133	ENST00000281932	Transcript	NON_SYNONYMOUS_CODING	223	105	35	E/D	gaA/gaC	-	ENSP=ENSP00000281932;PolyPhen=benign(0.257);SIFT=deleterious(0.03);HGNC=CCDC75	A	C/C,C/C	A	A	A	N/N,N/N	rs62621388	0.98	RM	2	0.665	0.961	572	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;BaseQRankSum=-0.852;CAnc=A;DP=103;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=A;GRP=2;HRun=0;HaplotypeScore=1.9576;MQ=37.47;MQ0=0;MQRankSum=-1.347;Map20=1;OAnc=A;QD=36.54;RM;ReadPosRankSum=1.182;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=572;mSC=0.665;pSC=0.961	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2371,150,0:1,0:31,28:0,0:1,0:0:37.47:0;1/1:39:99:1538,117,0:0,0:19,20:0,0:0,0:0:37.00:0	+
2_43804231_C/T	2	43804231	T	ENSG00000115970	ENST00000330266	Transcript	NON_SYNONYMOUS_CODING	97	97	33	G/R	Gga/Aga	-	ENSP=ENSP00000331105;PolyPhen=benign(0.018);SIFT=deleterious(0.04);HGNC=THADA	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	5.55	0.998	0.603	615	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.347;CAnc=C;CpG;DP=65;Dels=0.00;FS=0.000;GAnc=C;GRP=5.55;HRun=0;HaplotypeScore=1.9329;MQ=37.81;MQ0=0;MQRankSum=1.139;Map20=1;OAnc=C;QD=34.34;ReadPosRankSum=-1.040;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=615;mSC=0.998;pSC=0.603	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:65.34:1304,65,0:0,0:0,1:0,0:14,22:0:37.81:0;1/1:28:84.27:1113,84,0:0,0:0,0:0,0:17,11:0:37.00:0	-
2_43931194_A/C	2	43931194	C	ENSG00000152527	ENST00000282406	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	1835	1725	575	K/N	aaA/aaC	-	ENSP=ENSP00000282406;PolyPhen=benign(0.04);SIFT=tolerated(0.49);HGNC=PLEKHH2	A	C/C,C/C	A	A	A	N/N,N/N	.	1	.	1.16	0.996	0.475	824	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.644;CAnc=A;DP=72;Dels=0.00;FS=3.606;GAnc=A;GRP=1.16;HRun=0;HaplotypeScore=0.9665;MQ=37.00;MQ0=0;MQRankSum=0.044;Map20=1;OAnc=A;QD=37.03;ReadPosRankSum=-0.044;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=824;mSC=0.996;pSC=0.475	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:77.38:1477,77,0:1,0:16,22:0,0:0,0:0:37.00:0;1/1:33:99:1292,99,0:0,0:14,19:0,0:0,0:0:37.00:0	+
2_44073367_G/A	2	44073367	A	ENSG00000143921	ENST00000272286	Transcript	NON_SYNONYMOUS_CODING	329	239	80	C/Y	tGc/tAc	-	ENSP=ENSP00000272286;PolyPhen=benign(0);SIFT=deleterious(0.04);HGNC=ABCG8	G	A/A,A/A	G	G	G	N/N,N/N	rs80025980	0.98	.	2.68	0.020	0.004	809	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=G;DP=91;Dels=0.00;FS=0.000;GAnc=G;GRP=2.68;HRun=0;HaplotypeScore=0.0000;MQ=37.51;MQ0=0;Map20=1;OAnc=G;QD=37.04;TS=HPGOMC;TSseq=G,G,G,A,G,G;bSC=809;mSC=0.020;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2218,169,0:28,31:0,0:0,0:0,0:0:37.51:0;1/1:32:96.31:1255,96,0:18,14:0,0:0,0:0,0:0:37.00:0	+
2_61507459_T/C	2	61507459	C	ENSG00000115464	ENST00000263989	Transcript	NON_SYNONYMOUS_CODING	4720	4720	1574	I/V	Ata/Gta	-	ENSP=ENSP00000263989;PolyPhen=benign(0);SIFT=tolerated(0.59);HGNC=USP34	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-2.89	0.993	0.901	123	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.029;CAnc=T;DP=86;Dels=0.00;FS=0.000;GAnc=T;GRP=-2.89;HRun=0;HaplotypeScore=2.5778;MQ=37.51;MQ0=0;MQRankSum=-1.674;Map20=1;OAnc=T;QD=37.58;ReadPosRankSum=1.439;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=123;mSC=0.993;pSC=0.901	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2250,138,0:0,0:23,34:0,0:0,1:0:37.51:0;1/1:27:81.26:1058,81,0:0,0:13,14:0,0:0,0:0:37.00:0	-
2_63609160_T/C	2	63609160	C	ENSG00000143951	ENST00000272321	Transcript	NON_SYNONYMOUS_CODING	2033	1505	502	Y/C	tAt/tGt	-	ENSP=ENSP00000272321;PolyPhen=benign(0.005);SIFT=tolerated(0.22);HGNC=WDPCP	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-10.8	0.119	0.597	460	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=74;Dels=0.00;FS=0.000;GAnc=T;GRP=-10.8;HRun=0;HaplotypeScore=1.9576;MQ=37.66;MQ0=0;Map20=1;OAnc=T;QD=38.96;TS=HPGOMC;TSseq=T,T,T,T,C,T;UR;bSC=460;mSC=0.119;pSC=0.597	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1786,135,0:0,0:24,20:0,0:0,0:0:37.66:0;1/1:29:87.28:1154,87,0:0,0:11,18:0,0:0,0:0:37.00:0	-
2_67631129_G/A	2	67631129	A	ENSG00000143971	ENST00000272342	Transcript	NON_SYNONYMOUS_CODING	1445	1315	439	G/R	Gga/Aga	-	ENSP=ENSP00000272342;PolyPhen=benign(0.002);SIFT=tolerated(0.82);HGNC=ETAA1	G	A/A,A/A	G	G	G	N/N,N/N	rs35777125	0.96	.	-1.05	0.000	.	661	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.05;AN=4;CAnc=G;DP=83;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=G;GRP=-1.05;HRun;HaplotypeScore=1.9944;MQ=40.53;MQ0=0;Map20=1;OAnc=G;QD=38.22;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=661;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2211,169,0:37,20:0,0:0,0:0,0:0:40.53:0;1/1:26:78.25:1034,78,0:14,12:0,0:0,0:0,0:0:37.00:0	+
2_69240651_G/A	2	69240651	A	ENSG00000169604	ENST00000303714	Transcript	NON_SYNONYMOUS_CODING	342	20	7	R/K	aGa/aAa	-	ENSP=ENSP00000301945;PolyPhen=benign(0.001);HGNC=ANTXR1	G	A/A,A/A	G	G	G	N/N,N/N	rs28365986	0.96	.	-2.76	0.970	.	839	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.13;CAnc=G;DP=41;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=-2.76;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.49;TS=HPGO;TSseq=G,G,G,G;UR;bSC=839;mSC=0.970	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:84.27:1111,84,0:16,11:0,0:0,0:0,0:0:37.00:0;1/1:13:39.12:510,39,0:2,11:0,0:0,0:0,0:0:37.00:0	+
2_71211883_G/T	2	71211883	T	ENSG00000144031	ENST00000360589	Transcript	NON_SYNONYMOUS_CODING	1080	1046	349	R/L	cGt/cTt	-	ENSP=ENSP00000353796;PolyPhen=benign(0.001);SIFT=tolerated(0.77);HGNC=ANKRD53	G	T/T,T/T	G	G	G	N/N,N/N	rs11688921	0.99	CpG	-0.16	0.000	.	741	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=79;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=-0.16;HRun=2;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.70;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=741;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1774,135,0:0,0:0,0:0,0:26,19:0:37.00:0;1/1:34:99:1282,99,0:0,0:0,0:0,0:21,13:0:36.40:0	+
2_71650080_C/T	2	71650080	T	ENSG00000075292	ENST00000264447	Transcript	NON_SYNONYMOUS_CODING	3750	3436	1146	P/S	Cct/Tct	-	ENSP=ENSP00000264447;PolyPhen=benign(0.226);SIFT=tolerated(0.23);HGNC=ZNF638	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	0.366	0.573	.	415	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.180;CAnc=C;DP=86;Dels=0.00;FS=0.000;GAnc=C;GRP=0.366;HRun=0;HaplotypeScore=3.9568;MQ=38.18;MQ0=0;MQRankSum=-0.151;Map20=1;OAnc=C;QD=33.67;ReadPosRankSum=0.393;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=415;mSC=0.573	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:43.38:1447,43,0:0,0:1,1:0,0:23,16:0:38.18:0;1/1:44:99:1709,132,0:0,0:0,0:0,0:21,23:0:37.00:0	+
2_73435582_C/T	2	73435582	T	ENSG00000214513	ENST00000398468	Transcript	NON_SYNONYMOUS_CODING	846	437	146	T/M	aCg/aTg	-	ENSP=ENSP00000381486;PolyPhen=possibly_damaging(0.646);SIFT=deleterious(0.03);HGNC=NOTO	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	-2.79	0.000	.	538	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=77;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.79;HRun=0;HaplotypeScore=0.0000;MQ=38.48;MQ0=0;Map20=1;OAnc=C;QD=37.87;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=538;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1548,117,0:0,0:0,0:0,0:23,16:0:38.48:0;1/1:37:99:1414,111,0:0,0:0,0:0,0:17,20:0:37.00:0	+
2_74642544_C/T	2	74642544	T	ENSG00000159239	ENST00000290390	Transcript	NON_SYNONYMOUS_CODING	988	679	227	G/R	Ggg/Agg	-	ENSP=ENSP00000290390;PolyPhen=benign(0.008);SIFT=tolerated(0.52);HGNC=C2orf81	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	.	.	.	124	.	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=43;Dels=0.00;FS=0.000;GAnc=C;HRun=0;HaplotypeScore=0.0000;MQ=36.65;MQ0=0;OAnc=C;QD=36.08;TS=HPGOMC;TSseq=C,-,C,C,C,C;bSC=124	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:84.26:1079,84,0:0,0:0,0:0,0:15,14:0:36.65:0;1/1:14:42.14:560,42,0:0,0:0,0:0,0:9,5:0:37.00:0	-
2_74684500_A/G	2	74684500	G	ENSG00000115274	ENST00000233331	Transcript	NON_SYNONYMOUS_CODING	674	580	194	M/V	Atg/Gtg	-	ENSP=ENSP00000233331;PolyPhen=benign(0);SIFT=tolerated(0.27);HGNC=INO80B	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	4.3	0.967	.	99	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=51;Dels=0.00;FS=0.000;GAnc=A;GRP=4.3;HRun=0;HaplotypeScore=1.9864;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.57;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=99;mSC=0.967	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1306,99,0:0,0:0,0:15,18:0,0:0:37.00:0;1/1:18:54.17:692,54,0:0,0:0,0:7,11:0,0:0:37.00:0	+
2_74689432_C/T	2	74689432	T	ENSG00000115275	ENST00000233616	Transcript	NON_SYNONYMOUS_CODING	1647	1484	495	R/Q	cGa/cAa	-	ENSP=ENSP00000233616;PolyPhen=benign(0.046);SIFT=deleterious(0.04);HGNC=MOGS	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	4.31	1.000	.	99	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=57;Dels=0.02;FS=0.000;GAnc=C;GRP=4.31;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=35.17;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=99;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:93.30:1229,93,0:0,0:0,0:0,0:17,16:0:37.00:0;1/1:23:69.23:912,69,0:0,0:0,0:0,0:8,15:0:37.00:0	-
2_84880445_G/C	2	84880445	C	ENSG00000115423	ENST00000237449	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	5089	5081	1694	G/A	gGa/gCa	-	ENSP=ENSP00000237449;PolyPhen=benign(0.128);SIFT=tolerated(0.72);HGNC=DNAH6	G	C/C,C/C	G	G	G	N/N,N/N	rs28375417	0.91	.	5.03	1.000	.	628	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.05;AMR_AF=0.12;AN=4;ASN_AF=0.06;CAnc=G;DP=95;Dels=0.00;EUR_AF=0.13;FS=0.000;GAnc=G;GRP=5.03;HRun=0;HaplotypeScore=0.9997;MQ=38.53;MQ0=0;Map20=1;OAnc=G;QD=36.87;TS=HPGOMC;TSseq=G,G,G,-,G,G;bSC=628;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2172,169,0:0,1:16,38:0,0:1,0:0:38.53:0;1/1:37:99:1453,111,0:0,0:15,22:0,0:0,0:0:37.00:0	+
2_86260785_C/T	2	86260785	T	ENSG00000068654	ENST00000263857	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	4539	4160	1387	R/Q	cGg/cAg	-	ENSP=ENSP00000263857;PolyPhen=benign(0.002);SIFT=tolerated(0.26);HGNC=POLR1A	C	T/T,T/T	C	C	C	N/N,N/N	rs78239085	0.97	CpG	0.278	0.225	.	349	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AN=4;ASN_AF=0.10;BaseQRankSum=-1.733;CAnc=C;CpG;DP=60;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=0.278;HRun=0;HaplotypeScore=0.0000;MQ=40.30;MQ0=0;MQRankSum=0.578;Map20=1;OAnc=C;QD=33.52;ReadPosRankSum=1.523;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=349;mSC=0.225	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:59.31:1206,59,0:0,0:1,0:0,0:20,14:0:40.30:0;1/1:25:75.24:980,75,0:0,0:0,0:0,0:14,11:0:37.00:0	-
2_98804493_C/T	2	98804493	T	ENSG00000168658	ENST00000435344	Transcript	NON_SYNONYMOUS_CODING	1631	1367	456	P/L	cCc/cTc	-	ENSP=ENSP00000401959;PolyPhen=benign(0.132);SIFT=tolerated(0.79);HGNC=VWA3B	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	3.89	0.999	.	591	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.718;CAnc=C;DP=74;Dels=0.00;FS=6.472;GAnc=C;GRP=3.89;HRun=0;HaplotypeScore=2.9897;MQ=38.51;MQ0=0;MQRankSum=0.668;Map20=1;OAnc=C;QD=34.02;ReadPosRankSum=1.213;TS=HPGOMC;TSseq=C,C,C,T,C,C;UR;bSC=591;mSC=0.999	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:80.85:1802,81,0:0,0:2,0:0,0:24,26:0:38.51:0;1/1:22:66.22:873,66,0:0,0:0,0:0,0:8,14:0:37.00:0	+
2_110053570_C/T	2	110053570	T	ENSG00000172985	ENST00000309415	Transcript	NON_SYNONYMOUS_CODING	1796	1796	599	T/M	aCg/aTg	-	ENSP=ENSP00000309186;PolyPhen=possibly_damaging(0.719);SIFT=deleterious(0.02);HGNC=SH3RF3	C	T/T,T/T	C	C	C	N/N,N/N	rs117843818	0.98	CpG	2.82	0.000	.	892	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.06;CAnc=C;CpG;DP=53;Dels=0.00;FS=0.000;GAnc=C;GRP=2.82;HRun=0;HaplotypeScore=0.0000;MQ=36.68;MQ0=0;Map20=1;OAnc=C;QD=36.39;TS=HPGOMC;TSseq=C,C,C,C,T,C;UR;bSC=892;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:93.29:1198,93,0:0,0:0,0:0,0:14,18:0:36.68:0;1/1:21:63.18:822,63,0:0,0:0,0:0,0:11,10:0:37.00:0	+
2_112786049_G/A	2	112786049	A	ENSG00000153208	ENST00000295408	Transcript	NON_SYNONYMOUS_CODING	2865	2608	870	V/I	Gtt/Att	-	ENSP=ENSP00000295408;PolyPhen=benign(0.004);SIFT=tolerated(1);HGNC=MERTK	G	A/A,A/A	G	G	G	N/N,N/N	rs2230517	0.93	CpG	-3	0.002	.	632	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.21;AMR_AF=0.04;AN=4;CAnc=G;CpG;DP=80;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=-3;HRun=0;HaplotypeScore=0.9894;MQ=38.14;MQ0=0;Map20=1;OAnc=G;QD=36.12;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=632;mSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1911,147,0:26,26:0,0:0,0:0,0:0:38.14:0;1/1:28:84.26:1082,84,0:15,13:0,0:0,0:0,0:0:37.00:0	+
2_137928320_C/T	2	137928320	T	ENSG00000144229	ENST00000272643	Transcript	NON_SYNONYMOUS_CODING	1535	1535	512	T/M	aCg/aTg	-	ENSP=ENSP00000272643;PolyPhen=benign(0.006);SIFT=tolerated(0.54);HGNC=THSD7B	C	T/T,T/T	C	C	C	N/N,N/N	rs61746979	0.97	CpG	-0.0378	0.614	0.139	836	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.09;AN=4;ASN_AF=0.01;BaseQRankSum=1.155;CAnc=C;CpG;DP=86;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=-0.0378;HRun=0;HaplotypeScore=0.9997;MQ=38.43;MQ0=0;MQRankSum=1.328;Map20=1;OAnc=C;QD=36.45;ReadPosRankSum=0.577;TS=HPGOMC;TSseq=C,C,C,C,C,T;UR;bSC=836;mSC=0.614;pSC=0.139	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2293,141,0:0,0:0,1:0,0:22,38:0:38.43:0;1/1:24:72.23:929,72,0:0,0:0,0:0,0:10,14:0:37.00:0	+
2_152372974_C/T	2	152372974	T	ENSG00000183091	ENST00000172853	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	17949	17801	5934	G/E	gGg/gAg	-	ENSP=ENSP00000172853;PolyPhen=benign(0.415);SIFT=tolerated(1);HGNC=NEB	C	T/T,T/T	C	C	C	N/N,N/N	rs3732309	0.99	.	5.58	1.000	0.301	106	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.04;BaseQRankSum=1.039;CAnc=C;DP=89;Dels=0.00;FS=0.000;GAnc=C;GRP=5.58;HRun=0;HaplotypeScore=0.0000;MQ=38.14;MQ0=0;MQRankSum=0.970;Map20=1;OAnc=C;QD=35.78;ReadPosRankSum=1.663;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=106;mSC=1.000;pSC=0.301	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1893,110,0:0,0:0,1:0,0:21,30:0:38.14:0;1/1:37:99:1467,111,0:0,0:0,0:0,0:16,21:0:37.00:0	-
2_166781158_G/A	2	166781158	A	ENSG00000123607	ENST00000243344	Transcript	NON_SYNONYMOUS_CODING	1555	1417	473	L/F	Ctt/Ttt	-	ENSP=ENSP00000243344;PolyPhen=benign(0.047);SIFT=tolerated(0.1);HGNC=TTC21B	G	A/A,A/A	G	G	G	N/N,N/N	rs2163649	0.96	.	1.72	0.991	0.909	357	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.11;AN=4;ASN_AF=0.08;CAnc=G;DP=79;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=1.72;HRun=2;HaplotypeScore=2.6637;MQ=38.67;MQ0=0;Map20=1;OAnc=G;QD=38.20;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=357;mSC=0.991;pSC=0.909	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2058,157,0:33,20:0,0:0,0:0,0:0:38.67:0;1/1:26:78.25:1013,78,0:11,15:0,0:0,0:0,0:0:37.00:0	-
2_167055393_T/C	2	167055393	C	ENSG00000169432	ENST00000303354	Transcript	NON_SYNONYMOUS_CODING	6100	5759	1920	D/G	gAt/gGt	-	ENSP=ENSP00000304748;PolyPhen=benign(0.013);SIFT=tolerated(0.11);HGNC=SCN9A	T	C/C,C/C	T	T	T	N/N,N/N	rs3750904	0.93	.	3.43	1.000	0.901	526	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.01;AMR_AF=0.20;AN=4;ASN_AF=0.13;BaseQRankSum=-0.619;CAnc=T;DP=88;Dels=0.00;FS=0.000;GAnc=T;GRP=3.43;HRun;HaplotypeScore=3.9971;MQ=39.09;MQ0=0;MQRankSum=-0.309;Map20=1;OAnc=T;QD=36.55;ReadPosRankSum=-0.247;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=526;mSC=1.000;pSC=0.901	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2080,128,0:0,0:19,36:0,0:0,1:0:39.09:0;1/1:32:96.31:1265,96,0:0,0:15,17:0,0:0,0:0:37.00:0	-
2_180634235_C/A	2	180634235	A	ENSG00000144331	ENST00000410066	Transcript	NON_SYNONYMOUS_CODING	852	248	83	S/I	aGc/aTc	-	ENSP=ENSP00000386845;PolyPhen=benign(0.038);SIFT=deleterious(0.02);HGNC=ZNF385B	C	A/A,A/A	C	C	C	N/N,N/N	rs148987445	1.0	.	6.06	0.971	0.346	728	0.5	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;BaseQRankSum=-1.073;CAnc=C;DP=57;Dels=0.00;FS=0.000;GAnc=C;GRP=6.06;HRun=0;HaplotypeScore=0.9958;MQ=38.41;MQ0=0;MQRankSum=-1.485;Map20=0.5;OAnc=C;QD=37.11;ReadPosRankSum=0.165;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=728;mSC=0.971;pSC=0.346	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:86.41:1592,86,0:17,23:0,1:0,0:0,0:0:38.41:0;1/1:15:45.13:575,45,0:10,5:0,0:0,0:0,0:0:37.00:0	-
2_197537115_T/G	2	197537115	G	ENSG00000144395	ENST00000389175	Transcript	NON_SYNONYMOUS_CODING	1118	983	328	L/W	tTg/tGg	-	ENSP=ENSP00000373827;PolyPhen=probably_damaging(0.997);SIFT=deleterious(0);HGNC=CCDC150	T	G/G,G/G	T	T	T	N/N,N/N	rs148697217	1.0	.	4.84	1.000	0.066	462	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;BaseQRankSum=-1.082;CAnc=T;DP=85;Dels=0.00;FS=2.737;GAnc=T;GRP=4.84;HRun;HaplotypeScore=4.9654;MQ=37.20;MQ0;MQRankSum=-1.082;Map20=1;OAnc=T;QD=34.93;ReadPosRankSum=-1.435;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=462;mSC=1.000;pSC=0.066	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:88.53:2024,89,0:0,0:0,0:35,19:2,0:0:37.20:1;1/1:28:84.27:1088,84,0:0,0:0,0:21,7:0,0:0:37.00:0	+
2_206057945_G/A	2	206057945	A	ENSG00000116117	ENST00000349953	Transcript	NON_SYNONYMOUS_CODING	2041	2041	681	A/T	Gca/Aca	-	ENSP=ENSP00000340280;PolyPhen=benign(0.005);SIFT=tolerated(0.29);HGNC=PARD3B	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	-0.53	0.001	0.985	885	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.796;CAnc=G;DP=64;Dels=0.00;FS=4.221;GAnc=G;GRP=-0.53;HRun;HaplotypeScore=0.0000;MQ=39.37;MQ0=0;MQRankSum=-1.077;Map20=1;OAnc=G;QD=35.57;ReadPosRankSum=1.545;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=885;mSC=0.001;pSC=0.985	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:71.34:1349,71,0:13,23:0,0:1,0:0,0:0:39.37:0;1/1:27:81.26:1064,81,0:10,17:0,0:0,0:0,0:0:37.00:0	+
2_207170241_A/G	2	207170241	G	ENSG00000204186	ENST00000374423	Transcript	NON_SYNONYMOUS_CODING	1375	989	330	H/R	cAt/cGt	-	ENSP=ENSP00000363545;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=ZDBF2	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-0.728	0.001	0.116	389	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=86;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.728;HRun=0;HaplotypeScore=0.0000;MQ=37.55;MQ0=0;Map20=1;OAnc=A;QD=38.64;TS=HPGOMC;TSseq=A,A,A,A,A,G;bSC=389;mSC=0.001;pSC=0.116	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2120,163,0:0,0:0,0:28,26:0,0:0:37.55:0;1/1:32:56.30:1173,56,0:0,1:0,0:13,18:0,0:0:37.00:0	+
2_207171573_G/A	2	207171573	A	ENSG00000204186	ENST00000374423	Transcript	NON_SYNONYMOUS_CODING	2707	2321	774	R/Q	cGg/cAg	-	ENSP=ENSP00000363545;PolyPhen=benign(0.17);SIFT=tolerated(0.32);HGNC=ZDBF2	G	A/A,A/A	G	G	G	N/N,N/N	.	1.0	CpG	0.613	0.000	0.935	389	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=67;Dels=0.00;FS=0.000;GAnc=G;GRP=0.613;HRun=0;HaplotypeScore=0.0000;MQ=39.97;MQ0=0;Map20=1;OAnc=G;QD=35.75;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=389;mSC=0.000;pSC=0.935	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1427,111,0:19,19:0,0:0,0:0,0:0:39.97:0;1/1:28:84.27:1108,84,0:12,16:0,0:0,0:0,0:0:37.00:0	+
2_210682568_G/T	2	210682568	T	ENSG00000144406	ENST00000272845	Transcript	NON_SYNONYMOUS_CODING	1619	1585	529	A/S	Gcc/Tcc	-	ENSP=ENSP00000272845;PolyPhen=benign(0.189);SIFT=tolerated(0.22);HGNC=UNC80	G	T/T,T/T	G	G	G	N/N,N/N	rs143103069	0.99	.	6.07	1.000	0.924	469	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;CAnc=G;DP=63;Dels=0.00;FS=0.000;GAnc=G;GRP=6.07;HRun=0;HaplotypeScore=0.0000;MQ=38.44;MQ0=0;Map20=1;OAnc=G;QD=37.08;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=469;mSC=1.000;pSC=0.924	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1553,120,0:0,0:0,0:0,0:16,25:0:38.44:0;1/1:22:66.21:852,66,0:0,0:0,0:0,0:13,9:0:36.54:0	+
2_210704106_T/G	2	210704106	G	ENSG00000144406	ENST00000272845	Transcript	NON_SYNONYMOUS_CODING	3221	3187	1063	S/A	Tca/Gca	-	ENSP=ENSP00000272845;PolyPhen=possibly_damaging(0.883);SIFT=tolerated(0.07);HGNC=UNC80	T	G/G,G/G	T	T	T	N/N,N/N	rs148484278	0.99	.	5.54	0.998	0.110	533	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;BaseQRankSum=0.000;CAnc=T;DP=83;Dels=0.00;FS=3.979;GAnc=T;GRP=5.54;HRun=0;HaplotypeScore=2.9992;MQ=38.19;MQ0=0;MQRankSum=-0.693;Map20=1;OAnc=T;QD=37.39;ReadPosRankSum=-0.970;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=533;mSC=0.998;pSC=0.110	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1902,110,0:0,0:0,0:30,19:0,1:0:38.19:0;1/1:33:99:1281,99,0:0,0:0,0:21,12:0,0:0:37.00:0	+
2_215914446_C/G	2	215914446	G	ENSG00000144452	ENST00000272895	Transcript	NON_SYNONYMOUS_CODING	817	597	199	W/C	tgG/tgC	-	ENSP=ENSP00000272895;PolyPhen=possibly_damaging(0.508);SIFT=deleterious(0.02);HGNC=ABCA12	C	G/G,G/G	C	C	C	N/N,N/N	rs16853238	0.94	.	6.05	0.998	0.759	665	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.23;AMR_AF=0.03;AN=4;BaseQRankSum=0.165;CAnc=C;DP=73;Dels=0.00;FS=0.000;GAnc=C;GRP=6.05;HRun=0;HaplotypeScore=0.9997;MQ=37.71;MQ0=0;MQRankSum=-0.165;Map20=1;OAnc=C;QD=36.63;ReadPosRankSum=0.413;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=665;mSC=0.998;pSC=0.759	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:86.40:1571,86,0:0,0:1,0:23,17:0,0:0:37.71:0;1/1:31:93.30:1214,93,0:0,0:0,0:15,16:0,0:0:37.00:0	-
2_218770086_G/A	2	218770086	A	ENSG00000079308	ENST00000413554	Transcript	NON_SYNONYMOUS_CODING	99	83	28	P/L	cCg/cTg	-	ENSP=ENSP00000400383;PolyPhen=unknown(0);HGNC=TNS1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	-4.02	0.000	0.000	878	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=68;Dels=0.00;FS=0.000;GAnc=G;GRP=-4.02;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.80;TS=HPGOMC;TSseq=G,G,G,A,G,A;bSC=878;mSC=0.000;pSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1857,141,0:24,23:0,0:0,0:0,0:0:37.00:0;1/1:21:60.19:781,60,0:9,12:0,0:0,0:0,0:0:37.00:0	-
2_219507302_C/T	2	219507302	T	ENSG00000115568	ENST00000411696	Transcript	NON_SYNONYMOUS_CODING	4717	3937	1313	A/T	Gca/Aca	-	ENSP=ENSP00000398798;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=ZNF142	C	T/T,T/T	C	C	C	N/N,N/N	rs3821033	0.92	.	-7.18	0.000	0.643	96	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.13;AMR_AF=0.03;AN=4;ASN_AF=0.14;CAnc=C;DP=60;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=-7.18;HRun=0;HaplotypeScore=1.9944;MQ=38.73;MQ0=0;Map20=1;OAnc=C;QD=38.26;TS=HPGOMC;TSseq=C,C,C,C,C,N;UR;bSC=96;mSC=0.000;pSC=0.643	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1334,102,0:0,0:0,0:0,0:24,10:0:38.73:0;1/1:26:75.22:957,75,0:0,0:0,0:0,0:18,8:0:37.00:0	-
2_219562677_G/A	2	219562677	A	ENSG00000163482	ENST00000295709	Transcript	NON_SYNONYMOUS_CODING	3289	3010	1004	V/I	Gtc/Atc	-	ENSP=ENSP00000295709;PolyPhen=benign(0.003);SIFT=tolerated(0.85);HGNC=STK36	G	A/A,A/A	G	G	G	N/N,N/N	rs55633575	0.96	.	-8.5	0.001	0.107	114	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.17;AMR_AF=0.01;AN=4;CAnc=G;DP=77;Dels=0.00;FS=0.000;GAnc=G;GRP=-8.5;HRun=0;HaplotypeScore=0.0000;MQ=39.00;MQ0=0;Map20=1;OAnc=G;QD=37.07;TS=HPGOMC;TSseq=G,G,G,G,A,G;UR;bSC=114;mSC=0.001;pSC=0.107	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1664,126,0:25,19:0,0:0,0:0,0:0:39.00:0;1/1:33:99:1299,99,0:19,14:0,0:0,0:0,0:0:37.00:0	+
2_219563958_T/G	2	219563958	G	ENSG00000163482	ENST00000295709	Transcript	NON_SYNONYMOUS_CODING	3970	3691	1231	C/G	Tgc/Ggc	-	ENSP=ENSP00000295709;PolyPhen=benign(0.026);SIFT=tolerated(0.32);HGNC=STK36	T	G/G,G/G	T	T	T	N/N,N/N	rs73079079	0.96	.	5.77	1.000	0.728	114	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.17;AMR_AF=0.01;AN=4;CAnc=T;DP=56;Dels=0.00;FS=0.000;GAnc=T;GRP=5.77;HRun;HaplotypeScore=0.0000;MQ=37.64;MQ0=0;Map20=1;OAnc=T;QD=37.65;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=114;mSC=1.000;pSC=0.728	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.29:1200,93,0:0,0:0,0:17,13:0,0:0:37.64:0;1/1:25:75.22:952,75,0:0,0:0,0:14,11:0,0:0:37.00:0	+
2_224824484_C/T	2	224824484	T	ENSG00000135900	ENST00000258383	Transcript	NON_SYNONYMOUS_CODING	482	413	138	T/I	aCa/aTa	-	ENSP=ENSP00000258383;PolyPhen=possibly_damaging(0.684);SIFT=tolerated(0.12);HGNC=MRPL44	C	T/T,T/T	C	C	C	N/N,N/N	rs11546406	0.95	.	4.83	0.952	0.060	762	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.20;AMR_AF=0.01;AN=4;BaseQRankSum=0.766;CAnc=C;DP=81;Dels=0.00;FS=0.000;GAnc=C;GRP=4.83;HRun=0;HaplotypeScore=1.9156;MQ=39.05;MQ0=0;MQRankSum=0.121;Map20=1;OAnc=C;QD=36.72;ReadPosRankSum=-1.330;TS=HPGOMC;TSseq=C,C,C,T,C,C;bSC=762;mSC=0.952;pSC=0.060	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.40:1612,89,0:0,0:0,1:0,0:15,27:0:39.05:0;1/1:38:99:1496,114,0:0,0:0,0:0,0:23,15:0:37.00:0	+
2_231775646_A/C	2	231775646	C	ENSG00000135898	ENST00000392039	Transcript	NON_SYNONYMOUS_CODING	458	32	11	L/R	cTg/cGg	-	ENSP=ENSP00000375893;PolyPhen=benign(0.001);SIFT=deleterious(0.04);HGNC=GPR55	A	C/C,C/C	A	A	A	N/N,N/N	.	1	.	4.17	0.656	0.001	883	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.466;CAnc=A;DP=81;Dels=0.00;FS=3.181;GAnc=A;GRP=4.17;HRun;HaplotypeScore=1.8664;MQ=38.67;MQ0=0;MQRankSum=1.133;Map20=1;OAnc=A;QD=36.15;ReadPosRankSum=0.533;TS=HPGO;TSseq=A,A,A,A;UR;bSC=883;mSC=0.656;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1949,116,0:1,0:24,27:0,0:1,0:0:38.67:0;1/1:28:84.27:1108,84,0:0,0:11,17:0,0:0,0:0:37.00:0	-
2_234627791_A/G	2	234627791	G	ENSG00000244474	ENST00000373409	Transcript	NON_SYNONYMOUS_CODING	368	325	109	R/G	Aga/Gga	-	ENSP=ENSP00000362508;PolyPhen=benign(0.004);SIFT=tolerated(0.44);HGNC=UGT1A4	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-0.382	0.000	0.118	819	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=107;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.382;HRun;HaplotypeScore=1.9995;MQ=36.83;MQ0=0;Map20=1;OAnc=A;QD=37.41;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=819;mSC=0.000;pSC=0.118	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2277,175,0:0,1:0,0:35,24:0,0:0:36.83:0;1/1:47:99:1779,101,0:1,0:0,0:29,17:0,0:0:37.00:0	+
2_238449108_G/T	2	238449108	T	ENSG00000115648	ENST00000264605	Transcript	NON_SYNONYMOUS_CODING	1516	1222	408	A/S	Gcc/Tcc	-	ENSP=ENSP00000264605;PolyPhen=benign(0.004);SIFT=tolerated(0.89);HGNC=MLPH	G	T/T,T/T	G	G	G	N/N,N/N	rs61737681	0.95	.	0.753	0.001	0.045	964	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.10;AMR_AF=0.04;AN=4;ASN_AF=0.06;CAnc=G;DP=66;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=0.753;HRun=0;HaplotypeScore=0.9958;MQ=36.72;MQ0=0;Map20=1;OAnc=G;QD=35.25;TS=HPGOMC;TSseq=G,G,G,G,G,A;bSC=964;mSC=0.001;pSC=0.045	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1302,99,0:0,0:0,0:0,0:21,15:0:36.72:0;1/1:30:90.29:1183,90,0:0,0:0,0:0,0:14,16:0:37.00:0	+
2_241535385_C/G	2	241535385	G	ENSG00000142330	ENST00000391982	Transcript	NON_SYNONYMOUS_CODING	1490	1313	438	P/R	cCt/cGt	-	ENSP=ENSP00000375842;PolyPhen=benign(0.347);SIFT=deleterious(0);HGNC=CAPN10	C	G/G,G/G	C	C	-	N/N,N/N	.	1	.	1.68	0.000	0.522	970	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=75;Dels=0.00;FS=0.000;GAnc=C;GRP=1.68;HRun=0;HaplotypeScore=0.0000;MQ=36.72;MQ0=0;Map20=1;QD=38.80;TS=HPGMC;TSseq=C,C,C,C,C;bSC=970;mSC=0.000;pSC=0.522	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1430,108,0:0,0:0,0:15,20:0,0:0:36.72:0;1/1:39:99:1534,117,0:0,0:0,0:18,21:0,0:0:37.00:0	+
2_241808347_A/G	2	241808347	G	ENSG00000172482	ENST00000307503	Transcript	NON_SYNONYMOUS_CODING	452	65	22	N/S	aAc/aGc	-	ENSP=ENSP00000302620;PolyPhen=benign(0);SIFT=tolerated(0.95);HGNC=AGXT	A	G/G,G/G	A	A	A	N/N,N/N	rs34885252	0.96	.	-8.85	0.000	0.107	958	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.08;AN=4;ASN_AF=0.09;CAnc=A;DP=43;Dels=0.00;FS=0.000;GAnc=A;GRP=-8.85;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=37.52;TS=HPGOMC;TSseq=A,A,A,A,A,C;bSC=958;mSC=0.000;pSC=0.107	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.25:1121,87,0:0,0:0,0:12,16:0,0:0:37.00:0;1/1:14:42.13:543,42,0:0,0:0,0:7,7:0,0:0:37.00:0	+
2_241874893_G/A	2	241874893	A	ENSG00000226321	ENST00000430980	Transcript	NON_SYNONYMOUS_CODING	1739	1739	580	R/H	cGc/cAc	-	ENSP=ENSP00000387851;PolyPhen=benign(0.16);SIFT=tolerated(0.16)	G	A/A,A/A	G	G	G	N/N,N/N	rs78656795	0.93	CpG	0.624	.	0.197	964	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.07;AMR_AF=0.01;AN=4;ASN_AF=0.19;CAnc=G;CpG;DP=54;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=0.624;HRun=0;HaplotypeScore=0.0000;MQ=36.89;MQ0=0;Map20=1;OAnc=G;QD=37.54;TS=HPGO;TSseq=G,G,G,G;bSC=964;pSC=0.197	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1610,123,0:19,23:0,0:0,0:0,0:0:36.89:0;1/1:12:33.11:432,33,0:4,8:0,0:0,0:0,0:0:37.00:0	+
3_361547_T/G	3	361547	G	ENSG00000134121	ENST00000256509	Transcript	NON_SYNONYMOUS_CODING	730	88	30	S/A	Tca/Gca	-	ENSP=ENSP00000256509;PolyPhen=benign(0.064);SIFT=tolerated(0.16);HGNC=CHL1	T	G/G,G/G	T	T	T	N/N,N/N	rs116261368	0.99	.	4.91	0.995	0.100	963	0.5	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;ASN_AF=0.01;CAnc=T;DP=78;Dels=0.00;FS=0.000;GAnc=T;GRP=4.91;HRun=0;HaplotypeScore=0.0000;MQ=38.16;MQ0=0;Map20=0.5;OAnc=T;QD=39.15;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=963;mSC=0.995;pSC=0.100	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:2030,153,0:0,0:0,0:31,20:0,0:0:38.16:0;1/1:27:81.25:1044,81,0:0,0:0,0:15,12:0,0:0:36.63:0	+
3_9918776_A/G	3	9918776	G	ENSG00000187288	ENST00000336832	Transcript	NON_SYNONYMOUS_CODING	321	181	61	Y/H	Tac/Cac	-	ENSP=ENSP00000338642;PolyPhen=benign(0.001);SIFT=tolerated(0.61);HGNC=CIDEC	A	G/G,G/G	A	A	A	N/N,N/N	rs79419480	0.99	.	1.33	0.005	0.894	648	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=A;DP=54;Dels=0.00;FS=0.000;GAnc=A;GRP=1.33;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.82;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=648;mSC=0.005;pSC=0.894	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.31:1237,93,0:0,0:0,0:12,19:0,0:0:37.00:0;1/1:23:69.21:877,69,0:0,0:0,0:13,10:0,0:0:37.00:0	-
3_10242070_A/G	3	10242070	G	ENSG00000134070	ENST00000256458	Transcript	NON_SYNONYMOUS_CODING	385	295	99	I/V	Atc/Gtc	-	ENSP=ENSP00000256458;PolyPhen=benign(0.002);SIFT=tolerated(0.21);HGNC=IRAK2	A	G/G,G/G	A	A	A	N/N,N/N	rs55898544	0.99	.	-2.55	0.005	0.740	721	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.03;BaseQRankSum=-0.485;CAnc=A;DP=71;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.55;HRun=0;HaplotypeScore=1.5781;MQ=38.07;MQ0=0;MQRankSum=-1.732;Map20=1;OAnc=A;QD=36.14;ReadPosRankSum=-0.485;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=721;mSC=0.005;pSC=0.740	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1876,106,0:0,2:0,0:20,28:0,0:0:38.07:0;1/1:20:60.19:789,60,0:0,0:0,0:8,12:0,0:0:37.00:0	+
3_25900275_T/G	3	25900275	G	ENSG00000230891	ENST00000451284	Transcript	NON_SYNONYMOUS_CODING	681	238	80	T/P	Act/Cct	-	ENSP=ENSP00000389880;PolyPhen=possibly_damaging(0.74)	T	G/G,G/G	T	T	T	N/N,N/N	.	1	.	0.235	0.090	0.128	830	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.449;CAnc=T;DP=84;Dels=0.00;FS=3.707;GAnc=T;GRP=0.235;HRun;HaplotypeScore=2.9992;MQ=38.10;MQ0=0;MQRankSum=1.540;Map20=1;OAnc=T;QD=37.09;ReadPosRankSum=-0.385;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=830;mSC=0.090;pSC=0.128	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2036,123,0:0,0:0,0:21,31:1,0:0:38.10:0;1/1:30:90.29:1182,90,0:0,0:0,0:18,12:0,0:0:37.00:0	-
3_28365855_G/A	3	28365855	A	ENSG00000163512	ENST00000479665	Transcript	NON_SYNONYMOUS_CODING	1389	857	286	P/L	cCc/cTc	-	ENSP=ENSP00000419371;PolyPhen=benign(0.001);SIFT=tolerated(0.29);HGNC=AZI2	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	3.35	0.000	0.482	600	0.333333	AC=4;AF=1.00;AN=4;CAnc=G;DP=94;Dels=0.00;FS=0.000;GAnc=G;GRP=3.35;HRun=0;HaplotypeScore=0.0000;MQ=37.77;MQ0;Map20=0.333333;OAnc=G;QD=35.61;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=600;mSC=0.000;pSC=0.482	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:1956,153,0:27,27:0,0:0,0:0,0:0:37.77:0;1/1:40:99:1512,117,0:16,23:0,0:0,1:0,0:0:36.20:1	-
3_31839284_A/G	3	31839284	G	ENSG00000144645	ENST00000428241	Transcript	NON_SYNONYMOUS_CODING	116	116	39	I/T	aTt/aCt	-	ENSP=ENSP00000399200;PolyPhen=unknown(0);HGNC=OSBPL10	A	G/G,G/G	A	A	A	N/N,N/N	rs11129464	0.96	RM	-3.49	0.000	0.011	938	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.12;AMR_AF=0.03;AN=4;ASN_AF=0.01;CAnc=A;DP=86;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=-3.49;HRun=0;HaplotypeScore=0.0000;MQ=37.60;MQ0=0;Map20=1;OAnc=A;QD=38.89;RM;TS=HPGOMC;TSseq=A,A,A,A,A,G;UR;bSC=938;mSC=0.000;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1978,150,0:0,0:0,0:30,20:0,0:0:37.60:0;1/1:36:99:1429,108,0:0,0:0,0:19,17:0,0:0:37.00:0	-
3_38454497_C/T	3	38454497	T	ENSG00000093217	ENST00000207870	Transcript	NON_SYNONYMOUS_CODING	1694	1604	535	P/L	cCg/cTg	-	ENSP=ENSP00000207870;PolyPhen=benign(0.001);SIFT=tolerated(0.7);HGNC=XYLB	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	-1.44	0.000	.	529	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=71;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.44;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.70;TS=HPGOMC;TSseq=C,C,C,C,T,C;UR;bSC=529;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1503,114,0:0,0:0,0:0,0:20,19:0:37.00:0;1/1:32:96.31:1273,96,0:0,0:0,0:0,0:11,21:0:37.00:0	+
3_40528807_T/C	3	40528807	C	ENSG00000177873	ENST00000314686	Transcript	NON_SYNONYMOUS_CODING	1163	758	253	F/S	tTc/tCc	-	ENSP=ENSP00000322529;PolyPhen=possibly_damaging(0.842);SIFT=deleterious(0);HGNC=ZNF619	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	2.64	0.012	.	734	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.428;CAnc=T;DP=92;Dels=0.00;FS=0.000;GAnc=T;GRP=2.64;HRun;HaplotypeScore=0.9995;MQ=38.04;MQ0=0;MQRankSum=-1.550;Map20=1;OAnc=T;QD=37.60;ReadPosRankSum=0.821;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=734;mSC=0.012	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2176,134,0:0,0:31,25:0,0:1,0:0:38.04:0;1/1:35:99:1351,105,0:0,0:14,21:0,0:0,0:0:37.00:0	+
3_44819619_G/A	3	44819619	A	ENSG00000163808	ENST00000326047	Transcript	NON_SYNONYMOUS_CODING	408	259	87	A/T	Gca/Aca	-	ENSP=ENSP00000324020;PolyPhen=benign(0.114);SIFT=tolerated(0.21);HGNC=KIF15	G	A/A,A/A	G	G	T	N/N,N/N	.	1	CpG	4.25	0.997	.	308	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.938;CAnc=G;CpG;DP=82;Dels=0.00;FS=0.000;GAnc=G;GRP=4.25;HRun=0;HaplotypeScore=1.9995;MQ=39.34;MQ0=0;MQRankSum=-1.227;Map20=1;OAnc=T;QD=35.22;ReadPosRankSum=0.866;TS=HPGOMC;TSseq=G,G,G,T,T,T;UR;bSC=308;mSC=0.997	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1794,104,0:18,28:0,0:0,1:0,0:0:39.34:0;1/1:32:96.28:1218,96,0:13,19:0,0:0,0:0,0:0:37.00:0	+
3_44867592_C/G	3	44867592	G	ENSG00000163808	ENST00000326047	Transcript	NON_SYNONYMOUS_CODING	2760	2611	871	Q/E	Caa/Gaa	-	ENSP=ENSP00000324020;PolyPhen=benign(0.104);SIFT=tolerated(0.25);HGNC=KIF15	C	G/G,G/G	C	C	C	N/N,N/N	rs114793043	0.99	.	4.85	1.000	.	297	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AN=4;CAnc=C;DP=83;Dels=0.00;FS=0.000;GAnc=C;GRP=4.85;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.74;TS=HPGOMC;TSseq=C,C,C,C,C,G;UR;bSC=297;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1893,144,0:0,0:0,0:29,17:0,0:0:37.00:0;1/1:35:99:1358,105,0:0,0:0,0:13,22:0,0:0:37.00:0	+
3_44882586_C/G	3	44882586	G	ENSG00000163808	ENST00000326047	Transcript	NON_SYNONYMOUS_CODING	3590	3441	1147	H/Q	caC/caG	-	ENSP=ENSP00000324020;PolyPhen=benign(0.113);SIFT=tolerated(0.22);HGNC=KIF15	C	G/G,G/G	C	C	C	N/N,N/N	rs80007780	0.99	.	-5.01	0.924	.	297	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AN=4;BaseQRankSum=-0.448;CAnc=C;DP=79;Dels=0.00;FS=0.000;GAnc=C;GRP=-5.01;HRun=0;HaplotypeScore=1.9891;MQ=39.48;MQ0=0;MQRankSum=0.290;Map20=1;OAnc=C;QD=34.71;ReadPosRankSum=-0.132;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=297;mSC=0.924	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:58.44:1664,58,0:0,0:1,1:21,24:0,0:0:39.48:0;1/1:32:96.31:1255,96,0:0,0:0,0:14,18:0,0:0:37.00:0	+
3_44893288_A/C	3	44893288	C	ENSG00000163808	ENST00000326047	Transcript	NON_SYNONYMOUS_CODING	3965	3816	1272	E/D	gaA/gaC	-	ENSP=ENSP00000324020;PolyPhen=benign(0.003);SIFT=tolerated(0.11);HGNC=KIF15	A	C/C,C/C	A	A	A	N/N,N/N	rs17076986	0.99	.	3.22	0.033	.	307	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AN=4;BaseQRankSum=-0.042;CAnc=A;DP=72;Dels=0.00;FS=0.000;GAnc=A;GRP=3.22;HRun=0;HaplotypeScore=1.9995;MQ=37.71;MQ0=0;MQRankSum=0.211;Map20=1;OAnc=A;QD=35.75;ReadPosRankSum=-0.718;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=307;mSC=0.033	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:83.39:1535,83,0:0,1:14,25:0,0:1,0:0:37.71:0;1/1:30:90.29:1186,90,0:0,0:12,18:0,0:0,0:0:37.00:0	+
3_44935105_A/G	3	44935105	G	ENSG00000163810	ENST00000296125	Transcript	NON_SYNONYMOUS_CODING	535	467	156	K/R	aAa/aGa	-	ENSP=ENSP00000296125;PolyPhen=benign(0.203);SIFT=tolerated(0.1);HGNC=TGM4	A	G/G,G/G	A	A	A	N/N,N/N	rs74776426	0.98	.	-4.63	0.000	.	565	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.02;AN=4;CAnc=A;DP=70;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=-4.63;HRun=0;HaplotypeScore=1.9984;MQ=38.44;MQ0=0;Map20=1;OAnc=A;QD=38.31;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=565;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1604,123,0:0,0:0,0:17,24:0,0:0:38.44:0;1/1:29:87.27:1123,87,0:0,0:0,0:20,9:0,0:0:37.00:0	+
3_46586622_T/C	3	46586622	C	ENSG00000163827	ENST00000296144	Transcript	NON_SYNONYMOUS_CODING	429	247	83	T/A	Act/Gct	-	ENSP=ENSP00000296144;PolyPhen=benign(0);SIFT=tolerated(0.21);HGNC=LRRC2	T	C/C,C/C	T	T	T	N/N,N/N	rs17286758	0.91	.	-5.48	0.000	.	405	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.08;AMR_AF=0.06;AN=4;ASN_AF=0.12;CAnc=T;DP=78;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=T;GRP=-5.48;HRun=0;HaplotypeScore=0.0000;MQ=36.05;MQ0=2;Map20=1;OAnc=T;QD=35.86;TS=HPGOMC;TSseq=T,T,T,T,N,C;UR;bSC=405;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2041,156,0:0,0:22,33:0,0:1,0:0:36.05:2;1/1:22:66.18:828,66,0:0,0:8,14:0,0:0,0:0:35.42:0	-
3_49162298_C/T	3	49162298	T	ENSG00000172037	ENST00000305544	Transcript	NON_SYNONYMOUS_CODING	3098	2945	982	R/Q	cGg/cAg	-	ENSP=ENSP00000307156;PolyPhen=benign(0.032);SIFT=tolerated(0.53);HGNC=LAMB2	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	-0.617	0.000	.	0	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;CpG;DP=76;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.617;HRun=0;HaplotypeScore=1.5449;MQ=37.73;MQ0=0;Map20=1;OAnc=C;QD=36.51;TS=HPGOMC;TSseq=C,C,C,C,C,T;UR;bSC=0;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1530,117,0:0,0:0,0:0,0:24,17:0:37.73:0;1/1:35:99:1323,102,0:0,0:0,0:0,0:17,18:0:37.00:0	-
3_49314128_C/T	3	49314128	T	ENSG00000188315	ENST00000343010	Transcript	NON_SYNONYMOUS_CODING	1215	178	60	V/M	Gtg/Atg	-	ENSP=ENSP00000341139;PolyPhen=benign(0.005);SIFT=tolerated(0.11);HGNC=C3orf62	C	T/T,T/T	C	C	C	N/N,N/N	rs61749312	0.98	CpG	-1.75	0.000	.	1	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=66;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.75;HRun=0;HaplotypeScore=0.9665;MQ=38.35;MQ0=0;Map20=1;OAnc=C;QD=36.43;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=1;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1636,126,0:0,0:0,0:0,0:21,21:0:38.35:0;1/1:22:63.21:840,63,0:0,0:0,0:0,0:13,9:0:37.00:0	-
3_50617351_C/T	3	50617351	T	ENSG00000114735	ENST00000232854	Transcript	NON_SYNONYMOUS_CODING	1399	847	283	R/W	Cgg/Tgg	-	ENSP=ENSP00000232854;PolyPhen=benign(0.024);SIFT=tolerated(0.14);HGNC=HEMK1	C	T/T,T/T	C	C	C	N/N,N/N	rs182186502	1.0	CpG	-1.55	0.218	.	9	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-0.709;CAnc=C;CpG;DP=67;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.55;HRun=0;HaplotypeScore=2.9942;MQ=38.35;MQ0=0;MQRankSum=-1.732;Map20=1;OAnc=C;QD=36.47;ReadPosRankSum=0.079;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=9;mSC=0.218	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:87.70:1638,88,0:0,0:1,0:0,0:27,16:0:38.35:0;1/1:23:69.22:905,69,0:0,0:0,0:0,0:13,10:0:37.00:0	+
3_52433151_A/T	3	52433151	T	ENSG00000114841	ENST00000273600	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2632	2632	878	R/W	Agg/Tgg	-	ENSP=ENSP00000273600;PolyPhen=benign(0.027);SIFT=deleterious(0.04);HGNC=DNAH1	A	T/T,T/T	A	A	A	N/N,N/N	rs61734637	0.99	.	-1.8	0.154	.	68	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=A;DP=86;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.8;HRun=0;HaplotypeScore=0.0000;MQ=38.21;MQ0=0;Map20=1;OAnc=A;QD=38.17;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=68;mSC=0.154	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1903,144,0:0,0:0,0:0,0:20,29:0:38.21:0;1/1:37:99:1480,111,0:0,0:0,0:0,0:18,19:0:37.00:0	+
3_58835038_C/T	3	58835038	T	ENSG00000163689	ENST00000394474	Transcript	NON_SYNONYMOUS_CODING	2111	431	144	R/Q	cGg/cAg	-	ENSP=ENSP00000377984;PolyPhen=benign(0.001);SIFT=tolerated(0.36);HGNC=C3orf67	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	0.968	0.000	.	401	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=84;Dels=0.00;FS=0.000;GAnc=C;GRP=0.968;HRun=0;HaplotypeScore=0.0000;MQ=39.60;MQ0=0;Map20=1;OAnc=C;QD=37.43;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=401;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2129,163,0:0,0:0,0:0,0:19,36:0:39.60:0;1/1:28:84.27:1088,84,0:0,0:0,0:0,0:13,15:0:37.00:0	-
3_63813325_A/G	3	63813325	G	ENSG00000163632	ENST00000295896	Transcript	NON_SYNONYMOUS_CODING	604	494	165	Q/R	cAg/cGg	-	ENSP=ENSP00000295896;PolyPhen=benign(0);SIFT=tolerated(0.8);HGNC=C3orf49	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-5.24	0.001	.	509	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=80;Dels=0.00;FS=0.000;GAnc=A;GRP=-5.24;HRun=3;HaplotypeScore=0.0000;MQ=40.08;MQ0=0;Map20=1;OAnc=A;QD=38.10;TS=HPGOMC;TSseq=A,A,A,A,A,G;UR;bSC=509;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1824,141,0:0,0:0,0:29,17:0,0:0:40.08:0;1/1:33:99:1278,99,0:0,0:0,0:15,18:0,0:0:37.00:0	+
3_64008349_G/A	3	64008349	A	ENSG00000163636	ENST00000492933	Transcript	NON_SYNONYMOUS_CODING	327	274	92	P/S	Ccg/Tcg	-	ENSP=ENSP00000418695;PolyPhen=benign(0);SIFT=tolerated(0.46);HGNC=PSMD6	G	A/A,A/A	G	G	G	N/N,N/N	rs17069696	0.96	.	-2.42	0.000	.	522	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.03;AN=4;BaseQRankSum=-1.368;CAnc=G;DP=78;Dels=0.00;FS=0.000;GAnc=G;GRP=-2.42;HRun=0;HaplotypeScore=0.0000;MQ=37.79;MQ0=0;MQRankSum=-0.730;Map20=1;OAnc=G;QD=36.37;ReadPosRankSum=0.912;TS=HPGOMC;TSseq=G,G,G,G,A,C;UR;bSC=522;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:74.35:1415,74,0:21,16:0,0:1,0:0,0:0:37.79:0;1/1:40:99:1588,120,0:20,20:0,0:0,0:0,0:0:37.00:0	-
3_97806515_C/T	3	97806515	T	ENSG00000196578	ENST00000358642	Transcript	STOP_GAINED	499	499	167	R/*	Cga/Tga	-	ENSP=ENSP00000351466;HGNC=OR5AC2	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	1.27	0.065	.	782	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=90;Dels=0.00;FS=0.000;GAnc=C;GRP=1.27;HRun=0;HaplotypeScore=0.0000;MQ=39.02;MQ0=0;Map20=1;OAnc=C;QD=37.04;TS=HPGOM;TSseq=C,C,C,T,-;bSC=782;mSC=0.065	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2181,166,0:0,0:0,0:0,0:22,35:0:39.02:0;1/1:32:96.31:1267,96,0:0,0:0,0:0,0:13,19:0:37.00:0	+
3_100948418_G/A	3	100948418	A	ENSG00000081148	ENST00000193391	Transcript	NON_SYNONYMOUS_CODING	3627	3439	1147	P/S	Cct/Tct	-	ENSP=ENSP00000193391;PolyPhen=benign(0.016);SIFT=tolerated(0.78);HGNC=IMPG2	G	A/A,A/A	G	G	G	N/N,N/N	rs111784356	0.99	.	1.19	0.999	.	320	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=G;DP=79;Dels=0.00;FS=0.000;GAnc=G;GRP=1.19;HRun=0;HaplotypeScore=0.0000;MQ=38.08;MQ0=0;Map20=1;OAnc=G;QD=37.27;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=320;mSC=0.999	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2083,160,0:29,26:0,0:0,0:0,0:0:38.08:0;1/1:24:69.22:901,69,0:17,6:1,0:0,0:0,0:0:37.00:0	-
3_101390760_A/G	3	101390760	G	ENSG00000066422	ENST00000461821	Transcript	NON_SYNONYMOUS_CODING	812	608	203	L/S	tTg/tCg	-	ENSP=ENSP00000417369;PolyPhen=unknown(0);HGNC=ZBTB11	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	3.83	0.003	.	195	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=84;Dels=0.00;FS=0.000;GAnc=A;GRP=3.83;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.92;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=195;mSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2135,163,0:0,0:0,0:35,19:0,0:0:37.00:0;1/1:30:90.30:1196,90,0:0,0:0,0:11,19:0,0:0:37.00:0	-
3_108475945_C/T	3	108475945	T	ENSG00000163515	ENST00000295755	Transcript	NON_SYNONYMOUS_CODING	287	88	30	V/I	Gtt/Att	-	ENSP=ENSP00000295755;PolyPhen=benign(0.009);SIFT=tolerated(0.92);HGNC=RETNLB	C	T/T,T/T	C	C	-	N/N,N/N	rs148314795	1.0	CpG	-9.21	0.000	.	592	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=0.704;CAnc=C;CpG;DP=75;Dels=0.00;FS=0.000;GAnc=C;GRP=-9.21;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=0.592;Map20=1;OAnc=-;QD=33.63;ReadPosRankSum=-1.606;TS=HPGOMC;TSseq=C,C,C,-,-,-;UR;bSC=592;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:49.41:1546,49,0:0,0:1,1:0,0:24,19:0:37.00:0;1/1:30:90.28:1182,90,0:0,0:0,0:0,0:16,14:0:37.00:0	-
3_113187675_G/C	3	113187675	C	ENSG00000163611	ENST00000295872	Transcript	NON_SYNONYMOUS_CODING	1083	823	275	L/V	Cta/Gta	-	ENSP=ENSP00000295872;PolyPhen=benign(0.007);SIFT=tolerated(0.64);HGNC=SPICE1	G	C/C,C/C	G	G	G	N/N,N/N	rs16861032	0.94	.	0.647	0.523	.	372	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.07;AMR_AF=0.03;AN=4;ASN_AF=0.09;CAnc=G;DP=72;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=0.647;HRun=0;HaplotypeScore=0.0000;MQ=38.12;MQ0=0;Map20=1;OAnc=G;QD=37.94;TS=HPGOMC;TSseq=G,G,-,G,G,A;UR;bSC=372;mSC=0.523	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1702,132,0:0,0:20,23:0,0:0,0:0:38.12:0;1/1:28:84.28:1115,84,0:0,0:13,15:0,0:0,0:0:37.00:0	-
3_120067877_G/T	3	120067877	T	ENSG00000163428	ENST00000295628	Transcript	NON_SYNONYMOUS_CODING	310	214	72	L/M	Ctg/Atg	-	ENSP=ENSP00000295628;PolyPhen=benign(0.243);SIFT=tolerated(0.2);HGNC=LRRC58	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	4.51	1.000	.	588	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=45;Dels=0.00;FS=0.000;GAnc=G;GRP=4.51;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.67;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=588;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1314,99,0:0,0:0,0:0,0:17,17:0:37.00:0;1/1:11:33.08:422,33,0:0,0:0,0:0,0:4,7:0:37.00:0	-
3_130285929_C/T	3	130285929	T	ENSG00000206384	ENST00000358511	Transcript	NON_SYNONYMOUS_CODING	1697	1666	556	P/S	Cct/Tct	-	ENSP=ENSP00000351310;PolyPhen=possibly_damaging(0.618);SIFT=deleterious(0.04);HGNC=COL6A6	C	T/T,T/T	C	C	C	N/N,N/N	rs59021909	0.91	.	5.24	0.319	.	758	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.25;AMR_AF=0.04;AN=4;ASN_AF=0.08;BaseQRankSum=-1.732;CAnc=C;DP=82;Dels=0.00;EUR_AF=0.02;FS=3.195;GAnc=C;GRP=5.24;HRun=0;HaplotypeScore=0.9665;MQ=38.80;MQ0=0;MQRankSum=-0.722;Map20=1;OAnc=C;QD=36.35;ReadPosRankSum=0.000;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=758;mSC=0.319	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1814,104,0:0,0:0,1:0,0:26,20:0:38.80:0;1/1:33:99:1311,99,0:0,0:0,0:0,0:18,15:0:37.00:0	+
3_131068509_A/G	3	131068509	G	ENSG00000114670	ENST00000510688	Transcript	NON_SYNONYMOUS_CODING	1954	1730	577	K/R	aAa/aGa	-	ENSP=ENSP00000423458;PolyPhen=benign(0);SIFT=deleterious(0);HGNC=NEK11	A	G/G,G/G	A	A	A	N/N,N/N	rs12632399	0.97	.	-4.61	0.000	.	654	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.10;CAnc=A;DP=84;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=-4.61;HRun=0;HaplotypeScore=2.6645;MQ=39.19;MQ0=0;Map20=1;OAnc=A;QD=38.37;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=654;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1913,147,0:0,0:0,0:25,24:0,0:0:39.19:0;1/1:35:99:1395,105,0:0,0:0,0:17,18:0,0:0:37.00:0	+
3_133336155_C/G	3	133336155	G	ENSG00000163781	ENST00000260810	Transcript	NON_SYNONYMOUS_CODING	3740	3608	1203	G/A	gGa/gCa	-	ENSP=ENSP00000260810;PolyPhen=benign(0.124);SIFT=tolerated(0.6);HGNC=TOPBP1	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	0.118	0.455	.	477	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.217;CAnc=C;DP=74;Dels=0.00;FS=0.000;GAnc=C;GRP=0.118;HRun=0;HaplotypeScore=0.0000;MQ=38.24;MQ0=0;MQRankSum=1.011;Map20=1;OAnc=C;QD=36.94;ReadPosRankSum=-1.011;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=477;mSC=0.455	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1806,104,0:0,0:1,0:23,23:0,0:0:38.24:0;1/1:26:78.25:1026,78,0:0,0:0,0:12,14:0,0:0:37.00:0	-
3_167023573_C/T	3	167023573	T	ENSG00000169064	ENST00000307529	Transcript	NON_SYNONYMOUS_CODING	1670	1583	528	S/N	aGc/aAc	-	ENSP=ENSP00000305065;PolyPhen=benign(0.007);SIFT=tolerated(0.25);HGNC=ZBBX	C	T/T,T/T	C	C	C	N/N,N/N	rs140166106	0.99	.	-0.114	0.002	.	759	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;BaseQRankSum=1.607;CAnc=C;DP=84;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=-0.114;HRun=3;HaplotypeScore=1.9989;MQ=37.96;MQ0=0;MQRankSum=-0.722;Map20=1;OAnc=C;QD=35.49;ReadPosRankSum=0.886;TS=HPGOMC;TSseq=C,C,C,T,C,C;UR;bSC=759;mSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:76.97:2234,77,0:0,0:1,2:0,0:23,35:0:37.96:0;1/1:22:66.21:866,66,0:0,0:0,0:0,0:5,17:0:37.00:0	-
3_172642069_C/T	3	172642069	T	ENSG00000144962	ENST00000351008	Transcript	NON_SYNONYMOUS_CODING	1451	1267	423	V/M	Gtg/Atg	-	ENSP=ENSP00000341765;PolyPhen=possibly_damaging(0.77);SIFT=tolerated(0.07);HGNC=SPATA16	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	0.992	0.970	.	737	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=84;Dels=0.00;FS=0.000;GAnc=C;GRP=0.992;HRun;HaplotypeScore=0.0000;MQ=38.84;MQ0=0;Map20=1;OAnc=C;QD=35.56;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=737;mSC=0.970	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1740,132,0:0,0:0,0:0,0:28,19:0:38.84:0;1/1:36:99:1421,108,0:0,0:0,0:0,0:19,17:0:37.00:0	-
3_184070901_C/T	3	184070901	T	ENSG00000114859	ENST00000265593	Transcript	NON_SYNONYMOUS_CODING	2235	2063	688	R/Q	cGg/cAg	-	ENSP=ENSP00000265593;PolyPhen=benign(0.002);SIFT=tolerated(0.34);HGNC=CLCN2	C	T/T,T/T	C	C	C	N/N,N/N	rs111656822	0.99	CpG	0.405	0.058	.	482	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=53;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=0.405;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.34;TS=HPGOMC;TSseq=C,C,-,C,C,C;bSC=482;mSC=0.058	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1298,99,0:0,0:0,0:0,0:16,16:0:37.00:0;1/1:20:60.18:765,60,0:0,0:0,0:0,0:8,12:0:37.00:0	-
3_186917764_G/T	3	186917764	T	ENSG00000175077	ENST00000312295	Transcript	NON_SYNONYMOUS_CODING	728	698	233	G/V	gGc/gTc	-	ENSP=ENSP00000311712;PolyPhen=benign(0.029);SIFT=deleterious(0.03);HGNC=RTP1	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	5.74	0.989	.	761	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=5.74;HRun=0;HaplotypeScore=5.5691;MQ=37.76;MQ0=0;Map20=1;OAnc=G;QD=36.31;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=761;mSC=0.989	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1921,150,0:1,0:0,0:0,0:25,26:0:37.76:0;1/1:23:66.21:850,66,0:0,0:0,0:0,0:9,14:0:35.66:0	+
3_190573340_G/C	3	190573340	C	ENSG00000205835	ENST00000442080	Transcript	NON_SYNONYMOUS_CODING	749	749	250	T/R	aCa/aGa	-	ENSP=ENSP00000406164;PolyPhen=benign(0.34);SIFT=tolerated(0.29);HGNC=GMNC	G	C/C,C/C	G	G	G	N/N,N/N	rs111544243	0.99	.	2.71	0.002	.	853	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=G;DP=83;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=2.71;HRun=0;HaplotypeScore=0.9997;MQ=38.16;MQ0=0;Map20=1;OAnc=G;QD=37.66;TS=HPGOM;TSseq=G,G,G,G,G;bSC=853;mSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1954,153,0:0,0:18,31:0,0:0,0:0:38.16:0;1/1:32:96.30:1250,96,0:0,0:13,19:0,0:0,0:0:37.00:0	-
3_190573374_C/G	3	190573374	G	ENSG00000205835	ENST00000442080	Transcript	NON_SYNONYMOUS_CODING	715	715	239	E/Q	Gag/Cag	-	ENSP=ENSP00000406164;PolyPhen=benign(0.347);SIFT=tolerated(0.28);HGNC=GMNC	C	G/G,G/G	C	C	C	N/N,N/N	rs111524664	0.99	.	2.93	0.005	.	853	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=C;DP=84;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=2.93;HRun=0;HaplotypeScore=0.9979;MQ=38.14;MQ0=0;Map20=1;OAnc=C;QD=38.25;TS=HPGOM;TSseq=C,C,C,C,C;bSC=853;mSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2022,156,0:0,0:0,0:16,34:0,0:0:38.14:0;1/1:32:96.31:1266,96,0:0,0:0,0:20,12:0,0:0:37.00:0	-
3_194146248_T/C	3	194146248	C	ENSG00000133657	ENST00000256031	Transcript	NON_SYNONYMOUS_CODING	3538	3136	1046	T/A	Aca/Gca	-	ENSP=ENSP00000256031;PolyPhen=benign(0);SIFT=tolerated(0.91);HGNC=ATP13A3	T	C/C,C/C	T	T	T	N/N,N/N	rs189073215	1.0	.	0.329	0.997	.	542	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.246;CAnc=T;DP=90;Dels=0.00;FS=3.409;GAnc=T;GRP=0.329;HRun=0;HaplotypeScore=1.7319;MQ=39.56;MQ0=0;MQRankSum=-0.577;Map20=1;OAnc=T;QD=36.80;ReadPosRankSum=-1.428;TS=HPGOMC;TSseq=T,T,T,T,C,T;bSC=542;mSC=0.997	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2131,139,0:0,0:25,31:0,0:1,0:0:39.56:0;1/1:33:59.31:1207,59,0:0,0:18,14:0,0:0,1:0:37.00:0	-
3_194180616_T/C	3	194180616	C	ENSG00000133657	ENST00000256031	Transcript	NON_SYNONYMOUS_CODING	712	310	104	N/D	Aat/Gat	-	ENSP=ENSP00000256031;PolyPhen=benign(0.002);SIFT=tolerated(0.72);HGNC=ATP13A3	T	C/C,C/C	T	T	T	N/N,N/N	.	1.0	.	-1.64	0.049	.	581	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=T;DP=94;Dels=0.00;FS=0.000;GAnc=T;GRP=-1.64;HRun=0;HaplotypeScore=0.0000;MQ=39.90;MQ0=0;Map20=1;OAnc=T;QD=38.63;TS=HPGOMC;TSseq=T,T,T,T,T,C;bSC=581;mSC=0.049	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2351,181,0:0,0:31,29:0,0:0,0:0:39.90:0;1/1:34:99:1344,102,0:0,0:20,14:0,0:0,0:0:37.00:0	-
3_197687252_A/C	3	197687252	C	ENSG00000185621	ENST00000330198	Transcript	NON_SYNONYMOUS_CODING	182	160	54	T/P	Act/Cct	-	ENSP=ENSP00000328829;PolyPhen=benign(0.134);SIFT=tolerated(0.13);HGNC=LMLN	A	C/C,C/C	A	-	A	N/N,N/N	rs114780577	0.98	.	-5.61	0.000	.	764	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.02;AN=4;BaseQRankSum=0.683;CAnc=A;DP=45;Dels=0.00;EUR_AF=0.02;FS=3.424;GRP=-5.61;HRun;HaplotypeScore=0.0000;MQ=39.65;MQ0=0;MQRankSum=1.523;Map20=1;OAnc=A;QD=36.18;ReadPosRankSum=0.263;TS=HPOMC;TSseq=A,A,A,A,A;bSC=764;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:59.31:1227,59,0:0,1:18,14:0,0:0,0:0:39.65:0;1/1:12:36.11:469,36,0:0,0:7,5:0,0:0,0:0:37.00:0	+
4_983394_C/T	4	983394	T	ENSG00000145217	ENST00000361661	Transcript	NON_SYNONYMOUS_CODING	1711	1333	445	V/I	Gtc/Atc	-	ENSP=ENSP00000354721;PolyPhen=benign(0.028);SIFT=tolerated(1);HGNC=SLC26A1	C	T/T,T/T	C	C	C	N/N,N/N	rs144218313	1.0	CpG	-0.402	0.000	0.982	730	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;CpG;DP=53;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.402;HRun=0;HaplotypeScore=2.9953;MQ=36.73;MQ0=0;Map20=1;OAnc=C;QD=36.38;TS=HPGOMC;TSseq=C,C,N,C,C,C;bSC=730;mSC=0.000;pSC=0.982	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1416,108,0:0,1:0,0:0,0:18,18:0:36.73:0;1/1:15:45.15:600,45,0:0,0:0,0:0,0:6,9:0:37.00:0	-
4_2659543_C/A	4	2659543	A	ENSG00000125386	ENST00000324666	Transcript	NON_SYNONYMOUS_CODING	803	452	151	T/N	aCc/aAc	-	ENSP=ENSP00000324587;PolyPhen=benign(0.287);SIFT=deleterious(0);HGNC=FAM193A	C	A/A,A/A	C	C	C	N/N,N/N	rs34435530	1.0	.	2.22	1.000	0.740	624	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;BaseQRankSum=1.096;CAnc=C;DP=82;Dels=0.00;FS=3.285;GAnc=C;GRP=2.22;HRun=4;HaplotypeScore=2.9992;MQ=38.77;MQ0=0;MQRankSum=-1.308;Map20=1;OAnc=C;QD=36.26;ReadPosRankSum=0.389;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=624;mSC=1.000;pSC=0.740	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1846,107,0:26,23:0,1:0,0:0,0:0:38.77:0;1/1:32:96.31:1259,96,0:20,12:0,0:0,0:0,0:0:37.00:0	+
4_2941327_G/A	4	2941327	A	ENSG00000087269	ENST00000314262	Transcript	NON_SYNONYMOUS_CODING	2294	2245	749	L/F	Ctc/Ttc	-	ENSP=ENSP00000315674;PolyPhen=benign(0.2);SIFT=tolerated(0.7);HGNC=NOP14	G	A/A,A/A	G	G	G	N/N,N/N	rs149423815	1.0	.	-0.491	0.001	0.623	624	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;DP=71;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.491;HRun;HaplotypeScore=0.0000;MQ=37.64;MQ0=0;Map20=1;OAnc=G;QD=37.44;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=624;mSC=0.001;pSC=0.623	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1793,135,0:17,30:0,0:0,0:0,0:0:37.64:0;1/1:24:72.24:956,72,0:11,13:0,0:0,0:0,0:0:37.00:0	-
4_2990546_A/G	4	2990546	G	ENSG00000125388	ENST00000345167	Transcript	NON_SYNONYMOUS_CODING	395	145	49	I/V	Att/Gtt	-	ENSP=ENSP00000264764;PolyPhen=benign(0.052);SIFT=tolerated(0.42);HGNC=GRK4	A	G/G,G/G	A	A	A	N/N,N/N	rs142548315	1.0	.	1.72	0.007	0.578	628	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.125;CAnc=A;DP=77;Dels=0.00;FS=0.000;GAnc=A;GRP=1.72;HRun=0;HaplotypeScore=0.9997;MQ=38.88;MQ0=0;MQRankSum=-0.317;Map20=1;OAnc=A;QD=33.06;ReadPosRankSum=-1.586;TS=HPGOC;TSseq=A,A,A,N,G;UR;bSC=628;mSC=0.007;pSC=0.578	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:49.43:1521,49,0:1,3:0,0:18,22:0,0:0:38.88:0;1/1:32:56.30:1163,56,0:0,1:0,0:10,21:0,0:0:37.00:0	+
4_4276210_G/A	4	4276210	A	ENSG00000145220	ENST00000343470	Transcript	NON_SYNONYMOUS_CODING	957	716	239	P/L	cCt/cTt	-	ENSP=ENSP00000345917;PolyPhen=benign(0.002);SIFT=tolerated(0.29);HGNC=LYAR	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	2.19	0.000	0.038	895	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.535;CAnc=G;DP=57;Dels=0.00;FS=0.000;GAnc=G;GRP=2.19;HRun;HaplotypeScore=0.9989;MQ=39.43;MQ0=0;MQRankSum=-0.347;Map20=1;OAnc=G;QD=36.02;ReadPosRankSum=-1.238;TS=HPGOMC;TSseq=G,G,G,G,G,-;bSC=895;mSC=0.000;pSC=0.038	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:70.09:1330,70,0:17,17:0,0:0,0:0,0:0:39.43:0;1/1:21:63.20:814,63,0:10,11:0,0:0,0:0,0:0:37.00:0	-
4_4864299_G/A	4	4864299	A	ENSG00000163132	ENST00000468421	Transcript	NON_SYNONYMOUS_CODING	145	141	47	M/I	atG/atA	-	ENSP=ENSP00000446928;PolyPhen=unknown(0);HGNC=MSX1	G	A/A,A/A	G	G	G	N/N,N/N	rs10000804	0.97	RM	2.6	0.003	0.003	951	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.03;AN=4;CAnc=G;DP=65;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=G;GRP=2.6;HRun=0;HaplotypeScore=3.9910;MQ=36.74;MQ0=0;Map20=1;OAnc=G;QD=35.69;RM;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=951;mSC=0.003;pSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1425,108,0:18,20:1,0:0,0:0,0:0:36.74:0;1/1:26:78.25:1020,78,0:14,12:0,0:0,0:0,0:0:37.00:0	+
4_6303534_C/T	4	6303534	T	ENSG00000109501	ENST00000226760	Transcript	NON_SYNONYMOUS_CODING	2182	2012	671	A/V	gCg/gTg	-	ENSP=ENSP00000226760;PolyPhen=benign(0.058);SIFT=tolerated(0.45);HGNC=WFS1	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	-8.29	0.020	0.122	970	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=2.235;CAnc=C;CpG;DP=67;Dels=0.00;FS=2.601;GAnc=C;GRP=-8.29;HRun=0;HaplotypeScore=5.9845;MQ=38.08;MQ0=0;MQRankSum=-2.049;Map20=1;OAnc=C;QD=32.19;ReadPosRankSum=0.140;TS=HPGOMC;TSseq=C,C,C,T,C,C;bSC=970;mSC=0.020;pSC=0.122	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:33.23:1514,33,0:0,0:1,1:0,0:17,26:0:38.08:0;1/1:21:63.21:838,63,0:0,0:0,0:0,0:12,9:0:37.00:0	+
4_13606393_G/A	4	13606393	A	ENSG00000038219	ENST00000040738	Transcript	NON_SYNONYMOUS_CODING	2267	2131	711	P/S	Cca/Tca	-	ENSP=ENSP00000040738;PolyPhen=benign(0.006);SIFT=deleterious(0.03);HGNC=BOD1L	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	0.267	0.063	0.927	604	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=108;Dels=0.00;FS=0.000;GAnc=G;GRP=0.267;HRun=0;HaplotypeScore=0.9933;MQ=38.22;MQ0=0;Map20=1;OAnc=G;QD=38.24;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=604;mSC=0.063;pSC=0.927	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:73:99:2825,217,0:23,49:0,0:0,0:0,0:0:38.22:0;1/1:35:99:1371,105,0:15,20:0,0:0,0:0,0:0:37.00:0	-
4_15937717_G/C	4	15937717	C	ENSG00000137440	ENST00000259988	Transcript	NON_SYNONYMOUS_CODING	657	539	180	T/S	aCc/aGc	-	ENSP=ENSP00000259988;PolyPhen=benign(0.181);SIFT=tolerated(0.33);HGNC=FGFBP1	G	C/C,C/C	G	G	G	N/N,N/N	.	1	.	0.791	.	0.016	917	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=64;Dels=0.00;FS=0.000;GAnc=G;GRP=0.791;HRun=0;HaplotypeScore=1.9995;MQ=38.32;MQ0=0;Map20=1;OAnc=G;QD=38.35;TS=HPGOMC;TSseq=G,G,G,-,G,G;UR;bSC=917;pSC=0.016	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1759,135,0:0,0:22,23:0,0:0,0:0:38.32:0;1/1:19:57.18:734,57,0:0,0:6,13:0,0:0,0:0:37.00:0	-
4_17710905_G/C	4	17710905	C	ENSG00000047662	ENST00000265018	Transcript	NON_SYNONYMOUS_CODING	717	504	168	H/Q	caC/caG	-	ENSP=ENSP00000265018;PolyPhen=benign(0.149);SIFT=tolerated(0.1);HGNC=FAM184B	G	C/C,C/C	G	G	G	N/N,N/N	rs79121259	0.99	CpG	-5.36	0.192	0.622	791	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.03;CAnc=G;CpG;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=-5.36;HRun;HaplotypeScore=3.9987;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.54;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=791;mSC=0.192;pSC=0.622	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1574,120,0:0,0:22,18:0,0:0,0:0:37.00:0;1/1:12:36.11:462,36,0:0,0:6,6:0,0:0,0:0:37.00:0	-
4_22749148_G/A	4	22749148	A	ENSG00000249948	ENST00000508166	Transcript	NON_SYNONYMOUS_CODING	618	516	172	M/I	atG/atA	-	ENSP=ENSP00000427458;PolyPhen=benign(0.012);SIFT=tolerated(0.42);HGNC=GBA3	G	A/A,A/A	G	G	G	N/N,N/N	rs36090352	0.97	.	-1.61	0.000	0.150	843	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.14;AMR_AF=0.01;AN=4;BaseQRankSum=0.963;CAnc=G;DP=76;Dels=0.00;FS=3.522;GAnc=G;GRP=-1.61;HRun=0;HaplotypeScore=2.9910;MQ=39.88;MQ0=0;MQRankSum=1.059;Map20=1;OAnc=G;QD=34.94;ReadPosRankSum=0.481;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=843;mSC=0.000;pSC=0.150	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:70.55:1326,71,0:15,20:0,0:1,0:0,0:0:39.88:0;1/1:39:99:1534,117,0:17,22:0,0:0,0:0,0:0:37.00:0	+
4_71554844_T/G	4	71554844	G	ENSG00000132467	ENST00000254803	Transcript	NON_SYNONYMOUS_CODING	649	450	150	S/R	agT/agG	-	ENSP=ENSP00000254803;PolyPhen=benign(0.16);SIFT=tolerated(0.17);HGNC=UTP3	T	G/G,G/G	T	T	T	N/N,N/N	.	1	.	-0.281	1.000	0.940	545	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=50;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.281;HRun;HaplotypeScore=0.0000;MQ=36.69;MQ0=0;Map20=1;OAnc=T;QD=38.19;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=545;mSC=1.000;pSC=0.940	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1293,99,0:0,0:0,0:14,18:0,0:0:36.69:0;1/1:17:51.16:662,51,0:0,0:0,0:6,11:0,0:0:37.00:0	+
4_77231149_A/G	4	77231149	G	ENSG00000118804	ENST00000237642	Transcript	NON_SYNONYMOUS_CODING	1817	1073	358	H/R	cAc/cGc	-	ENSP=ENSP00000237642;PolyPhen=probably_damaging(0.98);SIFT=deleterious(0);HGNC=STBD1	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-0.298	0.716	0.927	623	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=76;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.298;HRun=0;HaplotypeScore=0.9997;MQ=38.44;MQ0=0;Map20=1;OAnc=A;QD=37.46;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=623;mSC=0.716;pSC=0.927	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1569,120,0:0,0:1,0:18,20:0,0:0:38.44:0;1/1:35:99:1366,105,0:0,0:0,0:23,12:0,0:0:37.00:0	+
4_77296802_C/T	4	77296802	T	ENSG00000163749	ENST00000434846	Transcript	STOP_GAINED	1256	1085	362	W/*	tGg/tAg	-	ENSP=ENSP00000401742;HGNC=CCDC158	C	T/T,T/T	C	C	C	N/N,N/N	rs7686674	0.96	.	4.07	1.000	0.896	501	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;CAnc=C;DP=97;Dels=0.00;FS=0.000;GAnc=C;GRP=4.07;HRun=0;HaplotypeScore=0.9958;MQ=37.70;MQ0=0;Map20=1;OAnc=C;QD=37.15;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=501;mSC=1.000;pSC=0.896	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2150,166,0:0,0:0,0:0,0:34,23:0:37.70:0;1/1:40:99:1571,120,0:0,0:0,0:0,0:23,17:0:36.75:0	-
4_79173675_A/G	4	79173675	G	ENSG00000138759	ENST00000264895	Transcript	NON_SYNONYMOUS_CODING	879	439	147	S/G	Agc/Ggc	-	ENSP=ENSP00000264895;PolyPhen=benign(0.017);SIFT=tolerated(0.32);HGNC=FRAS1	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	1.38	0.994	0.970	580	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=62;Dels=0.00;FS=0.000;GAnc=A;GRP=1.38;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=1;OAnc=A;QD=38.25;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=580;mSC=0.994;pSC=0.970	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1448,111,0:0,0:0,0:14,23:0,0:0:37.81:0;1/1:25:75.24:991,75,0:0,0:0,0:8,17:0,0:0:37.00:0	+
4_79186200_C/T	4	79186200	T	ENSG00000138759	ENST00000264895	Transcript	NON_SYNONYMOUS_CODING	1065	625	209	P/S	Cct/Tct	-	ENSP=ENSP00000264895;PolyPhen=probably_damaging(0.976);SIFT=deleterious(0.02);HGNC=FRAS1	C	T/T,T/T	C	C	C	N/N,N/N	rs7699637	0.97	.	4.3	0.946	0.757	528	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.02;AN=4;CAnc=C;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=4.3;HRun=0;HaplotypeScore=1.7337;MQ=38.10;MQ0=0;Map20=1;OAnc=C;QD=38.58;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=528;mSC=0.946;pSC=0.757	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1769,135,0:0,0:0,0:0,0:21,24:0:38.10:0;1/1:25:75.25:997,75,0:0,0:0,0:0,0:12,13:0:37.00:0	+
4_79186257_T/C	4	79186257	C	ENSG00000138759	ENST00000264895	Transcript	NON_SYNONYMOUS_CODING	1122	682	228	Y/H	Tac/Cac	-	ENSP=ENSP00000264895;PolyPhen=benign(0.056);SIFT=tolerated(0.07);HGNC=FRAS1	T	C/C,C/C	T	T	T	N/N,N/N	rs7682296	0.97	.	-0.0756	0.000	0.355	528	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.02;AN=4;CAnc=T;DP=58;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.0756;HRun=0;HaplotypeScore=1.9981;MQ=37.85;MQ0=0;Map20=1;OAnc=T;QD=37.48;TS=HPGOMC;TSseq=T,T,T,T,T,C;bSC=528;mSC=0.000;pSC=0.355	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1345,102,0:0,1:14,20:0,0:0,0:0:37.85:0;1/1:23:41.56:847,42,0:0,0:12,10:0,0:0,1:0:37.00:0	+
4_79240131_A/C	4	79240131	C	ENSG00000138759	ENST00000264895	Transcript	NON_SYNONYMOUS_CODING	2568	2128	710	I/L	Ata/Cta	-	ENSP=ENSP00000264895;PolyPhen=benign(0.001);SIFT=tolerated(0.74);HGNC=FRAS1	A	C/C,C/C	A	A	A	N/N,N/N	rs345512	0.96	.	3.26	0.529	0.506	639	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.18;AMR_AF=0.01;AN=4;CAnc=A;DP=76;Dels=0.00;FS=0.000;GAnc=A;GRP=3.26;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.51;TS=HPGOMC;TSseq=A,A,A,A,A,C;bSC=639;mSC=0.529;pSC=0.506	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1689,129,0:0,0:22,21:0,0:0,0:0:37.00:0;1/1:33:96.30:1250,96,0:0,0:19,14:0,0:0,0:0:37.00:0	+
4_80328483_C/T	4	80328483	T	ENSG00000196475	ENST00000358842	Transcript	NON_SYNONYMOUS_CODING	890	872	291	R/H	cGt/cAt	-	ENSP=ENSP00000351706;PolyPhen=benign(0.006);SIFT=tolerated(0.16);HGNC=GK2	C	T/T,T/T	C	C	C	N/N,N/N	rs143875620	1.0	CpG	-2.81	0.002	0.955	778	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;CpG;DP=106;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.81;HRun=0;HaplotypeScore=0.9973;MQ=37.45;MQ0=0;Map20=1;OAnc=C;QD=36.89;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=778;mSC=0.002;pSC=0.955	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:66:99:2468,190,0:0,0:0,0:0,0:31,34:0:37.45:0;1/1:40:99:1586,120,0:0,0:0,0:0,0:20,20:0:37.00:0	-
4_84361071_G/A	4	84361071	A	ENSG00000163312	ENST00000295488	Transcript	NON_SYNONYMOUS_CODING	1916	1753	585	P/S	Cct/Tct	-	ENSP=ENSP00000295488;PolyPhen=benign(0.055);SIFT=tolerated(0.1);HGNC=HELQ	G	A/A,A/A	G	G	G	N/N,N/N	rs6817280	0.94	.	5.68	1.000	0.984	597	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.25;AMR_AF=0.03;AN=4;CAnc=G;DP=102;Dels=0.00;FS=0.000;GAnc=G;GRP=5.68;HRun;HaplotypeScore=0.0000;MQ=39.65;MQ0=0;Map20=1;OAnc=G;QD=38.92;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=597;mSC=1.000;pSC=0.984	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:66:99:2602,199,0:44,22:0,0:0,0:0,0:0:39.65:0;1/1:36:99:1366,105,0:18,18:0,0:0,0:0,0:0:37.00:0	-
4_88231488_T/C	4	88231488	C	ENSG00000170509	ENST00000302219	Transcript	NON_SYNONYMOUS_CODING	656	611	204	D/G	gAt/gGt	-	ENSP=ENSP00000305438;PolyPhen=benign(0.231);SIFT=deleterious(0);HGNC=HSD17B13	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	3.95	0.186	0.458	670	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=74;Dels=0.00;FS=0.000;GAnc=T;GRP=3.95;HRun;HaplotypeScore=0.9997;MQ=39.48;MQ0=0;Map20=1;OAnc=T;QD=38.67;TS=HPGOMC;TSseq=T,T,T,T,-,T;bSC=670;mSC=0.186;pSC=0.458	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1851,141,0:0,0:31,15:0,0:0,0:0:39.48:0;1/1:27:81.24:1018,81,0:0,0:12,15:0,0:0,0:0:37.00:0	-
4_103952869_G/C	4	103952869	C	ENSG00000164038	ENST00000339611	Transcript	NON_SYNONYMOUS_CODING	2115	1243	415	P/A	Cca/Gca	-	ENSP=ENSP00000345241;PolyPhen=benign(0.025);SIFT=tolerated(0.31);HGNC=SLC9B2	G	C/C,C/C	G	G	G	N/N,N/N	rs72943528	0.99	.	4.1	0.994	0.861	575	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=G;DP=87;Dels=0.00;FS=0.000;GAnc=G;GRP=4.1;HRun=0;HaplotypeScore=0.0000;MQ=40.93;MQ0=0;Map20=1;OAnc=G;QD=38.29;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=575;mSC=0.994;pSC=0.861	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1986,153,0:0,0:24,27:0,0:0,0:0:40.93:0;1/1:36:99:1388,108,0:0,0:25,11:0,0:0,0:0:37.00:0	-
4_113353311_G/A	4	113353311	A	ENSG00000073331	ENST00000177648	Transcript	NON_SYNONYMOUS_CODING	2808	2608	870	G/S	Ggc/Agc	-	ENSP=ENSP00000177648;PolyPhen=benign(0.031);SIFT=tolerated(0.35);HGNC=ALPK1	G	A/A,A/A	G	G	G	N/N,N/N	rs2074380	0.98	CpG	3.17	0.004	0.064	649	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.08;CAnc=G;CpG;DP=74;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=3.17;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=39.01;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=649;mSC=0.004;pSC=0.064	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1671,126,0:19,23:0,0:0,0:0,0:0:37.00:0;1/1:32:96.31:1265,96,0:23,9:0,0:0,0:0,0:0:37.00:0	+
4_113353433_A/C	4	113353433	C	ENSG00000073331	ENST00000177648	Transcript	NON_SYNONYMOUS_CODING	2930	2730	910	E/D	gaA/gaC	-	ENSP=ENSP00000177648;PolyPhen=benign(0.03);SIFT=deleterious(0);HGNC=ALPK1	A	C/C,C/C	A	A	A	N/N,N/N	rs35308602	0.98	.	2.77	0.958	0.819	648	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.07;CAnc=A;DP=75;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=2.77;HRun=0;HaplotypeScore=0.0000;MQ=36.58;MQ0=0;Map20=1;OAnc=A;QD=38.55;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=648;mSC=0.958;pSC=0.819	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1884,144,0:0,0:25,23:0,0:0,0:0:36.58:0;1/1:27:78.25:1022,78,0:0,0:10,16:1,0:0,0:0:37.00:0	+
4_113353449_A/G	4	113353449	G	ENSG00000073331	ENST00000177648	Transcript	NON_SYNONYMOUS_CODING	2946	2746	916	N/D	Aac/Gac	-	ENSP=ENSP00000177648;PolyPhen=benign(0.006);SIFT=tolerated(0.23);HGNC=ALPK1	A	G/G,G/G	A	A	A	N/N,N/N	rs2074381	0.98	.	0.324	0.000	0.371	648	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.07;CAnc=A;DP=82;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=0.324;HRun=0;HaplotypeScore=1.9916;MQ=37.20;MQ0=0;Map20=1;OAnc=A;QD=38.69;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=648;mSC=0.000;pSC=0.371	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1929,147,0:0,0:0,0:29,20:0,0:0:37.20:0;1/1:33:99:1313,99,0:0,0:0,0:15,18:0,0:0:37.00:0	+
4_122068316_T/G	4	122068316	G	ENSG00000050730	ENST00000057513	Transcript	NON_SYNONYMOUS_CODING	838	623	208	E/A	gAa/gCa	-	ENSP=ENSP00000057513;PolyPhen=probably_damaging(0.996);SIFT=deleterious(0);HGNC=TNIP3	T	G/G,G/G	T	T	T	N/N,N/N	rs75386686	0.98	.	5.07	1.000	0.760	799	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=-0.115;CAnc=T;DP=84;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=5.07;HRun=0;HaplotypeScore=1.9891;MQ=38.48;MQ0=0;MQRankSum=-0.866;Map20=1;OAnc=T;QD=37.51;ReadPosRankSum=0.982;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=799;mSC=1.000;pSC=0.760	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2284,141,0:0,0:0,0:26,33:0,1:0:38.48:0;1/1:24:72.24:959,72,0:0,0:0,0:12,12:0,0:0:37.00:0	-
4_133367542_T/C	4	133367542	C	ENSG00000248369	ENST00000504357	Transcript	NON_SYNONYMOUS_CODING	313	202	68	M/V	Atg/Gtg	-	ENSP=ENSP00000423591;PolyPhen=unknown(0)	T	C/C,C/C	T	T	T	N/N,N/N	.	1	RM	0.225	0.199	0.226	963	0	AC=4;AF=1.00;AN=4;CAnc=T;DP=90;Dels=0.00;FS=0.000;GAnc=T;GRP=0.225;HRun=0;HaplotypeScore=0.0000;MQ=37.43;MQ0;Map20=0;OAnc=T;QD=38.65;RM;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=963;mSC=0.199;pSC=0.226	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:2004,153,0:0,0:27,24:0,0:0,0:0:37.43:0;1/1:39:99:1496,114,0:0,0:18,21:0,0:0,0:0:36.23:1	-
4_144359252_A/T	4	144359252	T	ENSG00000109458	ENST00000262994	Transcript	NON_SYNONYMOUS_CODING	996	694	232	M/L	Atg/Ttg	-	ENSP=ENSP00000262994;PolyPhen=benign(0.001);SIFT=tolerated(0.06);HGNC=GAB1	A	T/T,T/T	A	A	A	N/N,N/N	.	1	.	1.3	0.943	0.943	745	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=87;Dels=0.00;FS=0.000;GAnc=A;GRP=1.3;HRun;HaplotypeScore=2.9445;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.87;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=745;mSC=0.943;pSC=0.943	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1976,150,0:0,0:0,0:0,0:24,25:0:37.00:0;1/1:37:99:1460,111,0:0,0:0,0:0,0:17,20:0:37.00:0	+
4_154525138_A/G	4	154525138	G	ENSG00000121210	ENST00000240487	Transcript	NON_SYNONYMOUS_CODING	2305	2305	769	T/A	Aca/Gca	-	ENSP=ENSP00000240487;PolyPhen=benign(0.031);SIFT=tolerated(0.66);HGNC=KIAA0922	A	G/G,G/G	A	A	A	N/N,N/N	rs36023829	0.97	.	-11.1	0.000	0.826	777	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.12;AN=4;BaseQRankSum=1.310;CAnc=A;DP=75;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=-11.1;HRun=0;HaplotypeScore=2.9992;MQ=39.04;MQ0=0;MQRankSum=-0.211;Map20=1;OAnc=A;QD=36.67;ReadPosRankSum=-0.296;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=777;mSC=0.000;pSC=0.826	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:83.39:1537,83,0:0,1:0,0:20,19:0,0:0:39.04:0;1/1:34:96.32:1280,96,0:0,0:0,0:15,19:0,0:0:37.00:0	+
4_155241735_C/T	4	155241735	T	ENSG00000197410	ENST00000357232	Transcript	NON_SYNONYMOUS_CODING	3451	3451	1151	A/T	Gca/Aca	-	ENSP=ENSP00000349768;PolyPhen=probably_damaging(0.981);SIFT=deleterious(0.03);HGNC=DCHS2	C	T/T,T/T	C	C	C	N/N,N/N	rs79535970	0.97	.	5.59	0.057	0.929	603	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.04;AN=4;CAnc=C;DP=78;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=C;GRP=5.59;HRun;HaplotypeScore=0.0000;MQ=39.85;MQ0=0;Map20=1;OAnc=C;QD=36.44;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=603;mSC=0.057;pSC=0.929	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1891,144,0:0,0:0,0:0,0:25,26:0:39.85:0;1/1:27:81.25:1048,81,0:0,0:0,0:0,0:14,13:0:37.00:0	-
4_155411948_C/A	4	155411948	A	ENSG00000197410	ENST00000339452	Transcript	NON_SYNONYMOUS_CODING	921	560	187	R/L	cGc/cTc	-	ENSP=ENSP00000345062;PolyPhen=benign(0.28);SIFT=tolerated(0.18);HGNC=DCHS2	C	A/A,A/A	C	C	C	N/N,N/N	rs184619033	1.0	CpG	4.72	0.001	0.723	752	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;BaseQRankSum=0.612;CAnc=C;CpG;DP=52;Dels=0.00;FS=0.000;GAnc=C;GRP=4.72;HRun=0;HaplotypeScore=2.9992;MQ=37.83;MQ0=0;MQRankSum=1.325;Map20=1;OAnc=C;QD=33.72;ReadPosRankSum=-1.325;TS=HPGOMC;TSseq=C,C,-,C,C,C;UR;bSC=752;mSC=0.001;pSC=0.723	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:62.31:1247,62,0:18,16:1,0:0,0:0,0:0:37.83:0;1/1:16:48.15:620,48,0:9,7:0,0:0,0:0,0:0:37.00:0	-
4_185599489_G/A	4	185599489	A	ENSG00000164306	ENST00000508001	Transcript	NON_SYNONYMOUS_CODING	59	59	20	S/N	aGt/aAt	-	ENSP=ENSP00000424639;PolyPhen=benign(0.001);SIFT=deleterious(0);HGNC=CCDC111	G	A/A,A/A	G	G	G	N/N,N/N	rs34985821	0.93	.	-1.91	0.000	0.006	685	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.03;AMR_AF=0.11;AN=4;CAnc=G;DP=112;Dels=0.00;EUR_AF=0.12;FS=0.000;GAnc=G;GRP=-1.91;HRun;HaplotypeScore=0.0000;MQ=38.62;MQ0=0;Map20=1;OAnc=G;QD=37.07;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=685;mSC=0.000;pSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:73:99:2739,208,0:38,34:0,0:0,0:0,0:0:38.62:0;1/1:39:99:1557,117,0:21,18:0,0:0,0:0,0:0:37.00:0	+
4_187077200_T/A	4	187077200	A	ENSG00000109794	ENST00000227065	Transcript	NON_SYNONYMOUS_CODING	1009	430	144	W/R	Tgg/Agg	-	ENSP=ENSP00000227065;PolyPhen=benign(0.005);SIFT=tolerated(0.85);HGNC=FAM149A	T	A/A,A/A	T	T	T	N/N,N/N	rs147196705	1.0	.	-10.9	0.000	0.030	816	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=1.075;CAnc=T;DP=85;Dels=0.00;FS=0.000;GAnc=T;GRP=-10.9;HRun=3;HaplotypeScore=0.9997;MQ=38.67;MQ0=0;MQRankSum=-1.732;Map20=1;OAnc=T;QD=36.38;ReadPosRankSum=-1.493;TS=HPGOMC;TSseq=T,T,T,T,-,T;bSC=816;mSC=0.000;pSC=0.030	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2179,130,0:29,28:0,0:0,0:1,0:0:38.67:0;1/1:26:78.24:994,78,0:13,13:0,0:0,0:0,0:0:36.22:0	+
5_1232408_G/A	5	1232408	A	ENSG00000164363	ENST00000296821	Transcript	NON_SYNONYMOUS_CODING	358	235	79	G/S	Ggc/Agc	-	ENSP=ENSP00000296821;PolyPhen=probably_damaging(1);SIFT=deleterious(0);HGNC=SLC6A18	G	A/A,A/A	G	G	G	N/N,N/N	rs113861454	0.96	CpG	5.45	0.957	0.425	934	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.03;AMR_AF=0.10;AN=4;CAnc=G;CpG;DP=71;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=G;GRP=5.45;HRun=0;HaplotypeScore=0.0000;MQ=37.66;MQ0=0;Map20=1;OAnc=G;QD=39.06;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=934;mSC=0.957;pSC=0.425	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1791,135,0:23,21:0,0:0,0:0,0:0:37.66:0;1/1:26:78.24:1012,78,0:15,11:0,0:0,0:0,0:0:37.00:0	+
5_26988427_T/G	5	26988427	G	ENSG00000113100	ENST00000231021	Transcript	NON_SYNONYMOUS_CODING	187	14	5	H/P	cAt/cCt	-	ENSP=ENSP00000231021;PolyPhen=benign(0.002);SIFT=tolerated(0.06);HGNC=CDH9	T	G/G,G/G	T	T	T	N/N,N/N	.	1	.	-0.662	0.000	0.566	891	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.033;CAnc=T;DP=59;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.662;HRun=2;HaplotypeScore=1.9827;MQ=40.05;MQ0=0;MQRankSum=1.536;Map20=1;OAnc=T;QD=32.88;ReadPosRankSum=-0.686;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=891;mSC=0.000;pSC=0.566	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:34.36:1282,34,0:0,0:0,0:17,18:1,1:0:40.05:0;1/1:21:63.20:829,63,0:0,0:0,0:8,13:0,0:0:37.00:0	-
5_32712565_G/A	5	32712565	A	ENSG00000113389	ENST00000265074	Transcript	NON_SYNONYMOUS_CODING	1026	683	228	G/D	gGt/gAt	-	ENSP=ENSP00000265074;PolyPhen=benign(0.173);SIFT=tolerated(0.45);HGNC=NPR3	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	4.01	1.000	0.902	845	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.588;CAnc=G;DP=83;Dels=0.00;FS=0.000;GAnc=G;GRP=4.01;HRun=0;HaplotypeScore=1.9829;MQ=41.00;MQ0=0;MQRankSum=1.227;Map20=1;OAnc=G;QD=34.22;ReadPosRankSum=-1.372;TS=HPGOMC;TSseq=G,G,G,G,G,-;bSC=845;mSC=1.000;pSC=0.902	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1744,115,0:26,23:0,0:1,0:0,0:0:41.00:0;1/1:33:93.30:1230,93,0:19,14:0,0:0,0:0,0:0:36.69:0	+
5_34908877_T/C	5	34908877	C	ENSG00000113456	ENST00000341754	Transcript	NON_SYNONYMOUS_CODING	1741	842	281	E/G	gAg/gGg	-	ENSP=ENSP00000340879;PolyPhen=benign(0.029);SIFT=deleterious(0.01);HGNC=RAD1	T	C/C,C/C	T	T	T	N/N,N/N	rs1805327	0.97	.	5.73	0.998	0.602	515	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.04;AN=4;ASN_AF=0.03;BaseQRankSum=0.282;CAnc=T;DP=81;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=5.73;HRun;HaplotypeScore=2.9991;MQ=37.00;MQ0=0;MQRankSum=-0.932;Map20=1;OAnc=T;QD=36.10;ReadPosRankSum=0.759;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=515;mSC=0.998;pSC=0.602	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:91.54:2091,92,0:0,0:35,20:0,0:1,1:0:37.00:0;1/1:24:72.23:936,72,0:0,0:12,12:0,0:0,0:0:37.00:0	-
5_35084647_T/C	5	35084647	C	ENSG00000113494	ENST00000231423	Transcript	NON_SYNONYMOUS_CODING	315	298	100	I/V	Atc/Gtc	-	ENSP=ENSP00000231423;PolyPhen=benign(0.002);SIFT=tolerated(0.51);HGNC=PRLR	T	C/C,C/C	T	T	T	N/N,N/N	rs78705921	0.95	.	3.4	0.822	0.197	728	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.13;AMR_AF=0.04;AN=4;ASN_AF=0.04;BaseQRankSum=-0.433;CAnc=T;DP=73;Dels=0.00;EUR_AF=0.02;FS=3.233;GAnc=T;GRP=3.4;HRun=0;HaplotypeScore=0.0000;MQ=37.75;MQ0=0;MQRankSum=0.000;Map20=1;OAnc=T;QD=36.58;ReadPosRankSum=-0.693;TS=HPGOMC;TSseq=T,T,T,T,C,T;UR;bSC=728;mSC=0.822;pSC=0.197	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:80.38:1496,80,0:0,0:18,21:0,0:1,0:0:37.75:0;1/1:33:59.31:1218,59,0:0,0:14,18:0,0:1,0:0:37.00:0	-
5_37351447_G/C	5	37351447	C	ENSG00000113569	ENST00000231498	Transcript	NON_SYNONYMOUS_CODING	772	568	190	L/V	Ctt/Gtt	-	ENSP=ENSP00000231498;PolyPhen=benign(0.164);SIFT=tolerated(0.21);HGNC=NUP155	G	C/C,C/C	G	G	G	N/N,N/N	.	1	.	5.83	1.000	0.718	175	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=90;Dels=0.00;FS=0.000;GAnc=G;GRP=5.83;HRun=0;HaplotypeScore=0.0000;MQ=40.59;MQ0=0;Map20=1;OAnc=G;QD=37.31;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=175;mSC=1.000;pSC=0.718	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2421,190,0:0,0:34,29:0,0:0,0:0:40.59:0;1/1:26:78.25:1023,78,0:0,0:14,12:0,0:0,0:0:37.00:0	-
5_38438408_A/C	5	38438408	C	ENSG00000164318	ENST00000322350	Transcript	NON_SYNONYMOUS_CODING	2661	2315	772	K/T	aAg/aCg	-	ENSP=ENSP00000313084;PolyPhen=benign(0.011);SIFT=tolerated(0.46);HGNC=EGFLAM	A	C/C,C/C	A	A	A	N/N,N/N	.	1	.	-6.64	0.378	0.246	829	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.195;CAnc=A;DP=80;Dels=0.00;FS=0.000;GAnc=A;GRP=-6.64;HRun=0;HaplotypeScore=1.9325;MQ=37.52;MQ0=0;MQRankSum=-1.732;Map20=1;OAnc=A;QD=36.88;ReadPosRankSum=-0.060;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=829;mSC=0.378;pSC=0.246	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2172,138,0:0,1:24,32:0,0:0,0:0:37.52:0;1/1:22:63.21:835,63,0:0,0:12,9:0,0:0,1:0:37.00:0	+
5_64859187_G/A	5	64859187	A	ENSG00000113593	ENST00000261308	Transcript	NON_SYNONYMOUS_CODING	122	50	17	R/Q	cGg/cAg	-	ENSP=ENSP00000261308;PolyPhen=benign(0.04);SIFT=tolerated(0.08);HGNC=PPWD1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	4.74	0.995	0.534	270	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=67;Dels=0.00;FS=0.000;GAnc=G;GRP=4.74;HRun=0;HaplotypeScore=0.9665;MQ=38.55;MQ0=0;Map20=1;OAnc=G;QD=36.61;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=270;mSC=0.995;pSC=0.534	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1424,108,0:23,15:0,0:0,0:0,0:0:38.55:0;1/1:29:87.29:1157,87,0:13,16:0,0:0,0:0,0:0:37.00:0	+
5_64925797_A/G	5	64925797	G	ENSG00000253251	ENST00000510585	Transcript	NON_SYNONYMOUS_CODING	845	383	128	K/R	aAg/aGg	-	ENSP=ENSP00000424007;PolyPhen=benign(0);SIFT=tolerated(0.83)	A	G/G,G/G	A	A	A	N/N,N/N	rs7714222	0.97	.	0.0889	0.000	0.693	234	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.01;AN=4;CAnc=A;DP=93;Dels=0.00;FS=0.000;GAnc=A;GRP=0.0889;HRun;HaplotypeScore=1.9623;MQ=38.53;MQ0=0;Map20=1;OAnc=A;QD=37.93;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=234;mSC=0.000;pSC=0.693	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2233,175,0:0,0:0,0:33,25:0,0:0:38.53:0;1/1:35:99:1384,105,0:0,0:0,0:15,20:0,0:0:37.00:0	+
5_73236680_T/C	5	73236680	C	ENSG00000214944	ENST00000287898	Transcript	NON_SYNONYMOUS_CODING	5082	4906	1636	S/P	Tcc/Ccc	-	ENSP=ENSP00000287898;PolyPhen=benign(0.004);SIFT=tolerated(0.15)	T	C/C,C/C	T	T	T	N/N,N/N	rs282414	0.96	.	2.93	0.005	0.609	844	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.16;BaseQRankSum=-0.848;CAnc=T;DP=69;Dels=0.00;FS=0.000;GAnc=T;GRP=2.93;HRun=3;HaplotypeScore=0.0000;MQ=39.48;MQ0=0;MQRankSum=1.290;Map20=1;OAnc=T;QD=36.76;ReadPosRankSum=-0.995;TS=HPGOMC;TSseq=T,T,T,T,-,T;UR;bSC=844;mSC=0.005;pSC=0.609	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1761,101,0:0,0:18,27:0,0:0,1:0:39.48:0;1/1:22:66.22:880,66,0:0,0:10,12:0,0:0,0:0:37.00:0	+
5_79355594_C/G	5	79355594	G	ENSG00000113296	ENST00000350881	Transcript	NON_SYNONYMOUS_CODING	1043	853	285	R/G	Cgc/Ggc	-	ENSP=ENSP00000339730;PolyPhen=benign(0.033);SIFT=tolerated(0.19);HGNC=THBS4	C	G/G,G/G	C	C	C	N/N,N/N	.	1	CpG	1.85	0.000	0.797	569	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.948;CAnc=C;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=C;GRP=1.85;HRun;HaplotypeScore=2.6989;MQ=38.55;MQ0=0;MQRankSum=0.163;Map20=1;OAnc=C;QD=34.27;ReadPosRankSum=-0.163;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=569;mSC=0.000;pSC=0.797	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:34.35:1335,34,0:0,0:1,1:15,21:0,0:0:38.55:0;1/1:12:36.09:452,36,0:0,0:0,0:7,5:0,0:0:37.00:0	+
5_89979518_C/T	5	89979518	T	ENSG00000164199	ENST00000296619	Transcript	NON_SYNONYMOUS_CODING	5780	5780	1927	T/M	aCg/aTg	-	ENSP=ENSP00000296619;PolyPhen=benign(0.02);SIFT=tolerated(0.13);HGNC=GPR98	C	T/T,T/T	C	C	C	N/N,N/N	rs17544552	0.94	CpG	-10.6	0.000	0.316	235	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.08;AMR_AF=0.07;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=76;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=C;GRP=-10.6;HRun=0;HaplotypeScore=0.9973;MQ=38.27;MQ0=0;Map20=1;OAnc=C;QD=36.74;TS=HPGOMC;TSseq=C,C,T,C,C,C;UR;bSC=235;mSC=0.000;pSC=0.316	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1613,123,0:0,0:0,0:0,0:20,22:0:38.27:0;1/1:33:99:1308,99,0:0,0:0,0:0,0:13,20:0:37.00:0	+
5_127666327_G/T	5	127666327	T	ENSG00000138829	ENST00000262464	Transcript	NON_SYNONYMOUS_CODING	4722	4283	1428	T/N	aCc/aAc	-	ENSP=ENSP00000262464;PolyPhen=benign(0.331);SIFT=deleterious(0);HGNC=FBN2	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	5.14	0.139	0.887	425	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=56;Dels=0.00;FS=0.000;GAnc=G;GRP=5.14;HRun;HaplotypeScore=0.0000;MQ=38.68;MQ0=0;Map20=1;OAnc=G;QD=33.68;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=425;mSC=0.139;pSC=0.887	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:93.30:1212,93,0:0,0:0,0:0,0:20,15:0:38.68:0;1/1:21:63.21:831,63,0:0,0:0,0:0,0:8,13:0:37.00:0	-
5_127670871_T/C	5	127670871	C	ENSG00000138829	ENST00000262464	Transcript	NON_SYNONYMOUS_CODING	4403	3964	1322	T/A	Aca/Gca	-	ENSP=ENSP00000262464;PolyPhen=benign(0.059);SIFT=tolerated(0.08);HGNC=FBN2	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	5.09	0.980	0.811	425	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=81;Dels=0.00;FS=0.000;GAnc=T;GRP=5.09;HRun=0;HaplotypeScore=0.0000;MQ=39.29;MQ0=0;Map20=1;OAnc=T;QD=38.32;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=425;mSC=0.980;pSC=0.811	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1987,153,0:0,0:17,34:0,0:0,0:0:39.29:0;1/1:30:90.29:1175,90,0:0,0:14,16:0,0:0,0:0:37.00:0	-
5_130517930_A/C	5	130517930	C	ENSG00000186687	ENST00000379380	Transcript	NON_SYNONYMOUS_CODING	311	100	34	I/L	Ata/Cta	-	ENSP=ENSP00000368688;PolyPhen=benign(0.001);SIFT=tolerated(0.43);HGNC=LYRM7	A	C/C,C/C	A	A	A	N/N,N/N	.	1.0	.	2.33	1.000	0.771	369	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-0.600;CAnc=A;DP=81;Dels=0.00;FS=0.000;GAnc=A;GRP=2.33;HRun=0;HaplotypeScore=0.9997;MQ=40.33;MQ0=0;MQRankSum=0.999;Map20=1;OAnc=A;QD=36.51;ReadPosRankSum=1.599;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=369;mSC=1.000;pSC=0.771	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1932,116,0:1,0:30,21:0,0:0,0:0:40.33:0;1/1:29:87.26:1098,87,0:0,0:14,15:0,0:0,0:0:36.61:0	+
5_131396406_C/T	5	131396406	T	ENSG00000164399	ENST00000296870	Transcript	NON_SYNONYMOUS_CODING	185	7	3	R/C	Cgc/Tgc	-	ENSP=ENSP00000296870;PolyPhen=unknown(0);SIFT=deleterious(0.02);HGNC=IL3	C	T/T,T/T	C	C	C	N/N,N/N	rs35415145	0.99	CpG	-2.42	0.000	0.019	380	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=C;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.42;HRun=0;HaplotypeScore=1.9916;MQ=36.72;MQ0=0;Map20=1;OAnc=C;QD=37.17;TS=HPGOMC;TSseq=C,C,C,T,C,C;bSC=380;mSC=0.000;pSC=0.019	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1371,105,0:0,0:0,0:0,0:16,19:0:36.72:0;1/1:14:42.13:550,42,0:0,0:0,0:0,0:3,11:0:37.00:0	+
5_132387979_T/A	5	132387979	A	ENSG00000170606	ENST00000304858	Transcript	NON_SYNONYMOUS_CODING	326	37	13	C/S	Tgc/Agc	-	ENSP=ENSP00000302961;PolyPhen=probably_damaging(0.993);SIFT=tolerated(0.1);HGNC=HSPA4	T	A/A,A/A	T	T	T	N/N,N/N	rs61745470	0.99	.	4.61	1.000	0.983	398	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.02;AN=4;CAnc=T;DP=46;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=4.61;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.85;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=398;mSC=1.000;pSC=0.983	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1393,105,0:19,16:0,0:0,0:0,0:0:37.00:0;1/1:11:33.11:433,33,0:8,3:0,0:0,0:0,0:0:37.00:0	+
5_134347297_A/C	5	134347297	C	ENSG00000152705	ENST00000282611	Transcript	NON_SYNONYMOUS_CODING	1267	1181	394	K/T	aAg/aCg	-	ENSP=ENSP00000282611;PolyPhen=benign(0.093);SIFT=deleterious(0.01);HGNC=CATSPER3	A	C/C,C/C	A	A	A	N/N,N/N	.	1	.	2.17	0.000	0.135	580	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=65;Dels=0.00;FS=0.000;GAnc=A;GRP=2.17;HRun=0;HaplotypeScore=0.9997;MQ=39.20;MQ0=0;Map20=1;OAnc=A;QD=36.77;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=580;mSC=0.000;pSC=0.135	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1504,114,0:0,0:23,15:0,0:2,0:0:39.20:0;1/1:25:72.23:949,72,0:0,0:16,8:0,0:1,0:0:37.00:0	+
5_137500540_T/C	5	137500540	C	ENSG00000112983	ENST00000230901	Transcript	NON_SYNONYMOUS_CODING	1829	1813	605	T/A	Aca/Gca	-	ENSP=ENSP00000230901;PolyPhen=benign(0);SIFT=tolerated(0.75);HGNC=BRD8	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-3.88	0.475	0.971	44	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=78;Dels=0.00;FS=0.000;GAnc=T;GRP=-3.88;HRun=0;HaplotypeScore=0.0000;MQ=38.96;MQ0=0;Map20=1;OAnc=T;QD=38.18;TS=HPGOMC;TSseq=T,T,T,T,N,T;UR;bSC=44;mSC=0.475;pSC=0.971	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1751,135,0:0,0:23,22:0,0:0,0:0:38.96:0;1/1:33:99:1300,99,0:0,0:16,17:0,0:0,0:0:37.00:0	-
5_138728483_A/G	5	138728483	G	ENSG00000228672	ENST00000434752	Transcript	NON_SYNONYMOUS_CODING	2403	2288	763	A/V	gCa/gTa	-	ENSP=ENSP00000416033;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=C5orf65	G	A/A,A/A	G	G	G	N/N,N/N	rs10078623	0.97	.	1.23	0.000	0.127	301	1	1000gALT=G;AC=0;AF=0.00;AF1000g=0.97;AFR_AF=0.93;AMR_AF=0.99;AN=4;ASN_AF=0.97;CAnc=G;DP=51;EUR_AF=1.00;GAnc=G;GRP=1.23;MQ=37.77;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=A,G,G,G,G,G;bSC=301;mSC=0.000;pSC=0.127	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:39:99:0,105,1379:14,25:0,0:0,0:0,0:0:37.77:0;0/0:12:36.12:0,36,480:9,3:0,0:0,0:0,0:0:37.00:0	-
5_139946888_G/A	5	139946888	A	ENSG00000176087	ENST00000323146	Transcript	NON_SYNONYMOUS_CODING	1241	134	45	R/Q	cGa/cAa	-	ENSP=ENSP00000327133;PolyPhen=benign(0);SIFT=tolerated(0.35);HGNC=SLC35A4	G	A/A,A/A	G	G	G	N/N,N/N	rs61745336	0.97	CpG	-1.94	0.930	0.799	30	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.02;AN=4;CAnc=G;CpG;DP=53;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.94;HRun;HaplotypeScore=0.9997;MQ=36.94;MQ0=0;Map20=1;OAnc=G;QD=36.28;TS=HPGOMC;TSseq=G,G,G,G,G,N;UR;bSC=30;mSC=0.930;pSC=0.799	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1303,99,0:9,26:0,0:0,0:0,0:0:36.94:0;1/1:18:54.18:713,54,0:9,9:0,0:0,0:0,0:0:37.00:0	+
5_140579367_G/A	5	140579367	A	ENSG00000197479	ENST00000354757	Transcript	NON_SYNONYMOUS_CODING	20	20	7	R/H	cGc/cAc	-	ENSP=ENSP00000346802;PolyPhen=benign(0.002);SIFT=tolerated(0.1);HGNC=PCDHB11	G	A/A,A/A	G	-	G	N/N,N/N	rs917535	0.94	CpG	.	.	.	.	.	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.21;AMR_AF=0.05;AN=4;CAnc=G;CpG;DP=68;Dels=0.00;EUR_AF=0.02;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=39.53;MQ0=0;OAnc=G;QD=36.50;TS=HPOM;TSseq=G,-,G,-	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1712,129,0:22,24:0,0:0,0:0,0:0:39.53:0;1/1:22:66.20:828,66,0:13,9:0,0:0,0:0,0:0:37.00:0	+
5_140682958_C/A	5	140682958	A	ENSG00000120329	ENST00000239451	Transcript	NON_SYNONYMOUS_CODING	655	475	159	G/C	Ggt/Tgt	-	ENSP=ENSP00000239451;PolyPhen=possibly_damaging(0.671);SIFT=tolerated(0.06);HGNC=SLC25A2	C	A/A,A/A	C	C	C	N/N,N/N	rs10075302	0.96	.	-0.484	0.096	0.315	158	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.03;AMR_AF=0.04;AN=4;ASN_AF=0.04;CAnc=C;DP=90;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=-0.484;HRun=0;HaplotypeScore=0.0000;MQ=37.48;MQ0=0;Map20=1;OAnc=C;QD=36.02;TS=HPGOMC;TSseq=C,C,C,C,C,-;bSC=158;mSC=0.096;pSC=0.315	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2266,175,0:27,34:0,0:0,0:0,0:0:37.48:0;1/1:28:44.27:1029,44,0:13,14:1,0:0,0:0,0:0:37.00:0	-
5_140864784_C/T	5	140864784	T	ENSG00000242419	ENST00000306593	Transcript	NON_SYNONYMOUS_CODING	44	44	15	A/V	gCt/gTt	-	ENSP=ENSP00000306918;PolyPhen=benign(0.015);SIFT=tolerated(0.47);HGNC=PCDHGC4	C	T/T,T/T	C	C	C	N/N,N/N	rs138463062	1.0	.	3.91	0.999	0.917	40	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=C;DP=80;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=3.91;HRun;HaplotypeScore=4.9789;MQ=38.15;MQ0=0;Map20=1;OAnc=C;QD=36.16;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=40;mSC=0.999;pSC=0.917	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2058,159,0:0,0:0,0:0,0:21,35:0:38.15:0;1/1:24:72.23:941,72,0:0,0:0,0:0,0:10,14:0:37.00:0	+
5_145252377_C/T	5	145252377	T	ENSG00000204928	ENST00000377976	Transcript	NON_SYNONYMOUS_CODING	155	155	52	S/N	aGt/aAt	-	ENSP=ENSP00000367214;PolyPhen=possibly_damaging(0.741);SIFT=tolerated(0.24);HGNC=GRXCR2	C	T/T,T/T	C	C	C	N/N,N/N	rs34892428	0.95	.	5.07	1.000	0.933	769	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.11;AMR_AF=0.04;AN=4;CAnc=C;DP=69;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=5.07;HRun;HaplotypeScore=0.0000;MQ=36.77;MQ0=0;Map20=1;OAnc=C;QD=34.85;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=769;mSC=1.000;pSC=0.933	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1532,117,0:0,0:0,0:0,0:21,20:0:36.77:0;1/1:26:78.26:1036,78,0:0,0:0,0:0,0:12,14:0:37.00:0	-
5_159821755_A/T	5	159821755	T	ENSG00000221886	ENST00000408953	Transcript	NON_SYNONYMOUS_CODING	1251	743	248	M/K	aTg/aAg	-	ENSP=ENSP00000386184;PolyPhen=possibly_damaging(0.582);SIFT=deleterious(0);HGNC=C5orf54	A	T/T,T/T	A	A	A	N/N,N/N	rs113463292	1.0	RM	2.84	0.996	0.920	767	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=A;DP=65;Dels=0.00;FS=0.000;GAnc=A;GRP=2.84;HRun;HaplotypeScore=0.0000;MQ=37.88;MQ0=0;Map20=1;OAnc=A;QD=37.95;RM;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=767;mSC=0.996;pSC=0.920	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1323,102,0:0,0:0,0:0,0:16,18:0:37.88:0;1/1:31:93.30:1224,93,0:0,0:0,0:0,0:15,16:0:37.00:0	-
5_173416495_G/T	5	173416495	T	ENSG00000185056	ENST00000340147	Transcript	NON_SYNONYMOUS_CODING	334	229	77	V/F	Gtc/Ttc	-	ENSP=ENSP00000340887;PolyPhen=benign(0.2);SIFT=deleterious(0.01);HGNC=C5orf47	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	2.26	0.006	0.008	808	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=50;Dels=0.00;FS=0.000;GAnc=G;GRP=2.26;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.64;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=808;mSC=0.006;pSC=0.008	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1313,99,0:0,0:0,0:0,0:11,23:0:37.00:0;1/1:16:48.14:596,48,0:0,0:0,0:0,0:9,7:0:37.00:0	+
5_175811233_C/T	5	175811233	T	ENSG00000048162	ENST00000341213	Transcript	NON_SYNONYMOUS_CODING	921	460	154	D/N	Gac/Aac	-	ENSP=ENSP00000340662;PolyPhen=probably_damaging(0.98);SIFT=deleterious(0);HGNC=NOP16	C	T/T,T/T	C	C	C	N/N,N/N	rs1065206	0.94	.	4.47	0.989	0.051	730	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.13;AMR_AF=0.06;AN=4;CAnc=C;DP=83;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=C;GRP=4.47;HRun;HaplotypeScore=0.0000;MQ=37.54;MQ0=0;Map20=1;OAnc=C;QD=39.12;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=730;mSC=0.989;pSC=0.051	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2184,166,0:0,0:0,0:0,0:30,24:0:37.54:0;1/1:28:84.28:1119,84,0:0,0:0,0:0,0:15,13:0:37.00:0	-
5_176638506_G/C	5	176638506	C	ENSG00000165671	ENST00000347982	Transcript	NON_SYNONYMOUS_CODING	2400	2299	767	A/P	Gcc/Ccc	-	ENSP=ENSP00000343209;PolyPhen=benign(0.326);SIFT=tolerated(0.18);HGNC=NSD1	G	C/C,C/C	G	G	G	N/N,N/N	rs28932179	0.98	.	-7.92	0.008	0.370	374	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=G;DP=87;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=-7.92;HRun=3;HaplotypeScore=0.9997;MQ=38.96;MQ0=0;Map20=1;OAnc=G;QD=38.73;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=374;mSC=0.008;pSC=0.370	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1776,135,0:0,0:18,26:0,0:0,0:0:38.96:0;1/1:42:99:1660,126,0:0,0:25,17:0,0:0,0:0:37.00:0	+
5_176721119_G/A	5	176721119	A	ENSG00000165671	ENST00000347982	Transcript	NON_SYNONYMOUS_CODING	6044	5943	1981	M/I	atG/atA	-	ENSP=ENSP00000343209;PolyPhen=benign(0.027);SIFT=deleterious(0.01);HGNC=NSD1	G	A/A,A/A	G	G	G	N/N,N/N	rs35848863	0.96	.	1.47	0.754	0.980	359	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.08;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=-1.238;CAnc=G;DP=80;Dels=0.00;EUR_AF=0.04;FS=6.492;GAnc=G;GRP=1.47;HRun=0;HaplotypeScore=0.0000;MQ=38.21;MQ0=0;MQRankSum=-0.025;Map20=1;OAnc=G;QD=35.47;ReadPosRankSum=1.491;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=359;mSC=0.754;pSC=0.980	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:67.44:1771,67,0:21,26:0,0:2,0:0,0:0:38.21:0;1/1:31:93.29:1196,93,0:17,14:0,0:0,0:0,0:0:37.00:0	+
5_180432662_C/G	5	180432662	G	ENSG00000168903	ENST00000342868	Transcript	NON_SYNONYMOUS_CODING	1375	1191	397	S/R	agC/agG	-	ENSP=ENSP00000341787;PolyPhen=benign(0.064);SIFT=tolerated(0.06);HGNC=BTNL3	C	G/G,G/G	C	-	C	N/N,N/N	rs7726604	0.91	.	-0.964	0.000	0.000	.	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.25;AMR_AF=0.07;AN=4;ASN_AF=0.02;CAnc=C;DP=71;Dels=0.00;EUR_AF=0.05;FS=0.000;GRP=-0.964;HRun;HaplotypeScore=0.0000;MQ=38.35;MQ0=0;Map20=1;OAnc=C;QD=36.08;TS=HPO;TSseq=C,C,T;mSC=0.000;pSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1621,126,0:0,0:0,0:25,18:1,0:0:38.35:0;1/1:27:81.27:1075,81,0:0,0:0,0:10,17:0,0:0:37.00:0	+
5_180432666_C/G	5	180432666	G	ENSG00000168903	ENST00000342868	Transcript	NON_SYNONYMOUS_CODING	1379	1195	399	P/A	Ccc/Gcc	-	ENSP=ENSP00000341787;PolyPhen=benign(0.003);SIFT=tolerated(0.26);HGNC=BTNL3	C	G/G,G/G	C	-	C	N/N,N/N	rs7726607	0.91	.	-4.88	0.000	0.004	.	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.25;AMR_AF=0.07;AN=4;ASN_AF=0.02;CAnc=C;DP=69;Dels=0.00;EUR_AF=0.05;FS=0.000;GRP=-4.88;HRun=0;HaplotypeScore=0.0000;MQ=38.38;MQ0=0;Map20=1;OAnc=C;QD=37.83;TS=HPO;TSseq=C,C,C;mSC=0.000;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1660,129,0:0,0:0,0:26,17:0,0:0:38.38:0;1/1:26:78.25:1034,78,0:0,0:0,0:10,16:0,0:0:37.00:0	+
5_180432747_C/G	5	180432747	G	ENSG00000168903	ENST00000342868	Transcript	NON_SYNONYMOUS_CODING	1460	1276	426	Q/E	Cag/Gag	-	ENSP=ENSP00000341787;PolyPhen=possibly_damaging(0.511);SIFT=tolerated(0.13);HGNC=BTNL3	C	G/G,G/G	C	-	C	N/N,N/N	rs59220426	0.91	.	-5.86	0.000	0.015	.	0.5	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.25;AMR_AF=0.07;AN=4;ASN_AF=0.02;CAnc=C;DP=70;Dels=0.00;EUR_AF=0.05;FS=0.000;GRP=-5.86;HRun=0;HaplotypeScore=0.0000;MQ=38.55;MQ0=0;Map20=0.5;OAnc=C;QD=38.64;TS=HPO;TSseq=C,C,C;mSC=0.000;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1501,114,0:0,0:0,0:18,20:0,0:0:38.55:0;1/1:32:96.32:1280,96,0:0,0:0,0:17,15:0,0:0:37.00:0	+
6_4069561_A/G	6	4069561	G	ENSG00000145975	ENST00000274673	Transcript	NON_SYNONYMOUS_CODING	1300	896	299	M/T	aTg/aCg	-	ENSP=ENSP00000274673;PolyPhen=benign(0.007);SIFT=tolerated(0.15);HGNC=FAM217A	A	G/G,G/G	A	A	A	N/N,N/N	.	1.0	.	-5.56	0.000	0.530	634	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=0.764;CAnc=A;DP=96;Dels=0.00;FS=2.640;GAnc=A;GRP=-5.56;HRun=0;HaplotypeScore=0.0000;MQ=38.55;MQ0=0;MQRankSum=0.109;Map20=1;OAnc=A;QD=33.53;ReadPosRankSum=-1.128;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=634;mSC=0.000;pSC=0.530	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:53.97:1944,54,0:0,4:0,0:17,36:0,0:0:38.55:0;1/1:39:77.38:1473,77,0:0,1:0,0:18,20:0,0:0:37.00:0	-
6_9809852_T/C	6	9809852	C	ENSG00000181355	ENST00000460363	Transcript	NON_SYNONYMOUS_CODING	488	439	147	M/V	Atg/Gtg	-	ENSP=ENSP00000419718;PolyPhen=benign(0.004);SIFT=tolerated(0.3);HGNC=OFCC1	T	C/C,C/C	T	T	T	N/N,N/N	rs190877727	1.0	.	-0.739	0.000	0.007	932	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=T;DP=78;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=-0.739;HRun=0;HaplotypeScore=1.9995;MQ=38.75;MQ0=0;Map20=1;OAnc=T;QD=37.57;TS=HPGOMC;TSseq=T,T,T,T,T,C;bSC=932;mSC=0.000;pSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1724,135,0:0,0:18,27:0,0:0,0:0:38.75:0;1/1:33:99:1295,99,0:0,0:17,16:0,0:0,0:0:37.00:0	-
6_9809872_T/G	6	9809872	G	ENSG00000181355	ENST00000460363	Transcript	NON_SYNONYMOUS_CODING	468	419	140	Q/P	cAg/cCg	-	ENSP=ENSP00000419718;PolyPhen=benign(0);SIFT=tolerated(0.22);HGNC=OFCC1	T	G/G,G/G	T	T	T	N/N,N/N	rs182976546	1.0	.	4.09	0.000	0.009	932	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=T;DP=77;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=4.09;HRun;HaplotypeScore=0.9789;MQ=38.08;MQ0=0;Map20=1;OAnc=T;QD=37.29;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=932;mSC=0.000;pSC=0.009	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1748,135,0:0,1:0,0:14,30:0,0:0:38.08:0;1/1:31:93.30:1235,93,0:0,0:0,0:16,15:0,0:0:37.00:0	-
6_9809899_G/T	6	9809899	T	ENSG00000181355	ENST00000460363	Transcript	NON_SYNONYMOUS_CODING	441	392	131	T/K	aCa/aAa	-	ENSP=ENSP00000419718;PolyPhen=possibly_damaging(0.525);SIFT=tolerated(0.07);HGNC=OFCC1	G	T/T,T/T	G	G	G	N/N,N/N	rs187311635	1.0	.	-1.49	0.000	0.815	933	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;DP=100;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=-1.49;HRun;HaplotypeScore=1.7876;MQ=38.27;MQ0=0;Map20=1;OAnc=G;QD=38.92;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=933;mSC=0.000;pSC=0.815	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2446,187,0:0,0:0,0:0,0:22,39:0:38.27:0;1/1:38:99:1494,114,0:0,0:0,0:0,0:19,19:0:37.00:0	-
6_9933177_T/C	6	9933177	C	ENSG00000181355	ENST00000316020	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	286	286	96	K/E	Aaa/Gaa	-	ENSP=ENSP00000325053;PolyPhen=probably_damaging(0.985);SIFT=tolerated(0.2);HGNC=OFCC1	T	C/C,C/C	T	T	T	N/N,N/N	rs73720669	0.96	.	5.84	1.000	0.935	803	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.18;AMR_AF=0.01;AN=4;CAnc=T;DP=92;Dels=0.00;FS=0.000;GAnc=T;GRP=5.84;HRun=0;HaplotypeScore=0.0000;MQ=39.02;MQ0=0;Map20=1;OAnc=T;QD=38.42;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=803;mSC=1.000;pSC=0.935	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2261,175,0:0,0:34,24:0,0:0,0:0:39.02:0;1/1:34:99:1344,102,0:0,0:22,12:0,0:0,0:0:37.00:0	-
6_9977741_G/A	6	9977741	A	ENSG00000181355	ENST00000316020	Transcript	NON_SYNONYMOUS_CODING	61	61	21	P/S	Ccc/Tcc	-	ENSP=ENSP00000325053;PolyPhen=possibly_damaging(0.862);SIFT=deleterious(0);HGNC=OFCC1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	1.43	0.001	0.785	910	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=1.43;HRun;HaplotypeScore=0.0000;MQ=37.43;MQ0=0;Map20=1;OAnc=G;QD=36.78;TS=HPGOM;TSseq=G,G,G,G,G;bSC=910;mSC=0.001;pSC=0.785	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1725,132,0:24,21:0,0:0,0:0,0:0:37.43:0;1/1:29:87.26:1125,87,0:12,17:0,0:0,0:0,0:0:37.00:0	-
6_13612048_C/T	6	13612048	T	ENSG00000124523	ENST00000359782	Transcript	NON_SYNONYMOUS_CODING	1055	830	277	T/M	aCg/aTg	-	ENSP=ENSP00000352830;PolyPhen=possibly_damaging(0.584);SIFT=deleterious(0.05);HGNC=SIRT5	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	2.69	0.000	0.894	714	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.371;CAnc=C;CpG;DP=90;Dels=0.00;FS=0.000;GAnc=C;GRP=2.69;HRun=0;HaplotypeScore=1.9987;MQ=38.58;MQ0=0;MQRankSum=-0.990;Map20=1;OAnc=C;QD=37.34;ReadPosRankSum=1.547;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=714;mSC=0.000;pSC=0.894	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2124,129,0:0,0:0,1:0,0:23,32:0:38.58:0;1/1:34:99:1355,102,0:0,0:0,0:0,0:16,18:0:37.00:0	+
6_17541324_A/G	6	17541324	G	ENSG00000112186	ENST00000229922	Transcript	NON_SYNONYMOUS_CODING	1479	947	316	Y/C	tAt/tGt	-	ENSP=ENSP00000229922;PolyPhen=benign(0.035);SIFT=tolerated(0.16);HGNC=CAP2	A	G/G,G/G	A	A	A	N/N,N/N	rs34206659	0.98	.	-5.54	0.000	.	788	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.02;AN=4;CAnc=A;DP=73;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=-5.54;HRun=0;HaplotypeScore=0.0000;MQ=37.71;MQ0=0;Map20=1;OAnc=A;QD=38.20;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=788;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1637,123,0:0,0:0,0:27,15:0,0:0:37.71:0;1/1:31:93.28:1182,93,0:0,0:0,0:15,16:0,0:0:37.00:0	+
6_25969631_C/T	6	25969631	T	ENSG00000112343	ENST00000349458	Transcript	STOP_GAINED	914	490	164	R/*	Cga/Tga	-	ENSP=ENSP00000230099;HGNC=TRIM38	C	T/T,T/T	C	C	C	N/N,N/N	rs76757832	0.97	CpG	3.95	0.009	.	498	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AN=4;ASN_AF=0.06;CAnc=C;CpG;DP=82;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=3.95;HRun=0;HaplotypeScore=0.0000;MQ=37.58;MQ0=0;Map20=1;OAnc=C;QD=31.33;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=498;mSC=0.009	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1662,126,0:0,0:0,0:0,0:36,16:0:37.58:0;1/1:30:90.29:1183,90,0:0,0:0,0:0,0:18,12:0:37.00:0	+
6_29323838_A/C	6	29323838	C	ENSG00000243729	ENST00000377151	Transcript	NON_SYNONYMOUS_CODING	286	135	45	I/M	atT/atG	-	ENSP=ENSP00000366356;PolyPhen=possibly_damaging(0.487);SIFT=deleterious(0.04);HGNC=OR5V1	A	C/C,C/C	A	A	A	N/N,N/N	rs116575779	0.98	.	-3.19	0.000	0.449	779	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.03;CAnc=A;DP=75;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=-3.19;HRun=0;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;OAnc=A;QD=38.61;TS=HPGOM;TSseq=A,A,A,A,A;bSC=779;mSC=0.000;pSC=0.449	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1732,132,0:0,0:28,16:0,0:0,0:0:37.68:0;1/1:31:90.28:1152,90,0:0,0:20,11:0,0:0,0:0:36.67:0	-
6_29455505_T/G	6	29455505	G	ENSG00000204687	ENST00000377127	Transcript	NON_SYNONYMOUS_CODING	234	175	59	T/P	Acc/Ccc	-	ENSP=ENSP00000366331;PolyPhen=benign(0.001);SIFT=tolerated(0.14);HGNC=MAS1L	T	G/G,G/G	T	T	T	N/N,N/N	rs145164303	0.99	.	-1.92	0.000	0.234	824	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=T;DP=97;Dels=0.00;FS=0.000;GAnc=T;GRP=-1.92;HRun=2;HaplotypeScore=0.9958;MQ=37.88;MQ0=0;Map20=1;OAnc=T;QD=38.34;TS=HPGO;TSseq=T,T,T,T;bSC=824;mSC=0.000;pSC=0.234	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2065,160,0:0,0:0,0:27,26:0,0:0:37.88:0;1/1:44:99:1674,132,0:0,0:0,0:21,23:0,0:0:37.00:0	-
6_31596972_C/T	6	31596972	T	ENSG00000204469	ENST00000376007	Transcript	NON_SYNONYMOUS_CODING	2019	1817	606	P/L	cCt/cTt	-	ENSP=ENSP00000365175;PolyPhen=probably_damaging(0.938);HGNC=PRRC2A	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	4.69	1.000	0.689	873	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.630;CAnc=C;DP=74;Dels=0.00;FS=0.000;GAnc=C;GRP=4.69;HRun;HaplotypeScore=0.0000;MQ=38.29;MQ0=0;MQRankSum=-1.496;Map20=1;OAnc=C;QD=34.98;ReadPosRankSum=1.024;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=873;mSC=1.000;pSC=0.689	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:92.41:1642,92,0:0,0:1,0:0,0:26,19:0:38.29:0;1/1:28:84.27:1109,84,0:0,0:0,0:0,0:16,12:0:37.00:0	+
6_31600100_C/G	6	31600100	G	ENSG00000204469	ENST00000376007	Transcript	NON_SYNONYMOUS_CODING	3852	3650	1217	P/R	cCt/cGt	-	ENSP=ENSP00000365175;PolyPhen=unknown(0);HGNC=PRRC2A	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	4.42	0.999	0.819	867	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=59;Dels=0.00;FS=0.000;GAnc=C;GRP=4.42;HRun=0;HaplotypeScore=1.9981;MQ=38.60;MQ0=0;Map20=1;OAnc=C;QD=37.94;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=867;mSC=0.999;pSC=0.819	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1437,108,0:0,0:0,0:20,16:0,0:0:38.60:0;1/1:22:63.18:820,63,0:0,0:0,0:12,10:0,0:0:37.00:0	+
6_31601389_A/T	6	31601389	T	ENSG00000204469	ENST00000376007	Transcript	NON_SYNONYMOUS_CODING	4755	4553	1518	Y/F	tAc/tTc	-	ENSP=ENSP00000365175;PolyPhen=unknown(0);HGNC=PRRC2A	A	T/T,T/T	A	A	A	N/N,N/N	.	1	.	-0.39	0.051	0.417	867	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=35;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.39;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=34.62;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=867;mSC=0.051;pSC=0.417	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:24:66.21:864,66,0:0,0:0,0:0,0:13,11:0:37.00:0;1/1:11:33.11:440,33,0:0,0:0,0:0,0:4,7:0:37.00:0	+
6_31795560_C/T	6	31795560	T	ENSG00000204388	ENST00000542758	Transcript	NON_SYNONYMOUS_CODING	49	35	12	S/L	tCg/tTg	-	ENSP=ENSP00000441608;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=HSPA1B	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	-4.17	.	0.000	900	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.290;CAnc=C;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=-4.17;HRun=3;HaplotypeScore=0.0000;MQ=39.48;MQ0=0;MQRankSum=-0.627;Map20=1;OAnc=C;QD=37.00;ReadPosRankSum=-1.143;TS=HPGOMC;TSseq=C,C,G,C,T,C;bSC=900;pSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1772,101,0:0,0:1,0:0,0:23,23:0:39.48:0;1/1:16:48.16:633,48,0:0,0:0,0:0,0:7,9:0:37.00:0	+
6_32906586_C/T	6	32906586	T	ENSG00000242574	ENST00000416244	Transcript	NON_SYNONYMOUS_CODING	407	212	71	S/N	aGc/aAc	-	ENSP=ENSP00000391010;PolyPhen=benign(0.002);SIFT=tolerated(0.47);HGNC=HLA-DMB	C	T/T,T/T	C	C	C	N/N,N/N	rs117238467	0.98	.	-10.1	0.000	0.006	923	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;BaseQRankSum=-1.069;CAnc=C;DP=83;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-10.1;HRun;HaplotypeScore=1.5781;MQ=38.03;MQ0=0;MQRankSum=0.553;Map20=1;OAnc=C;QD=36.07;ReadPosRankSum=0.774;TS=HPGOMC;TSseq=C,C,C,C,G,T;bSC=923;mSC=0.000;pSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1764,101,0:0,0:0,1:0,0:23,23:0:38.03:0;1/1:35:99:1382,105,0:0,0:0,0:0,0:16,19:0:37.00:0	-
6_32906652_T/A	6	32906652	A	ENSG00000242574	ENST00000416244	Transcript	NON_SYNONYMOUS_CODING	341	146	49	D/V	gAt/gTt	-	ENSP=ENSP00000391010;PolyPhen=benign(0.029);SIFT=tolerated(0.35);HGNC=HLA-DMB	T	A/A,A/A	T	T	T	N/N,N/N	rs145269231	0.98	.	3.85	1.000	0.921	923	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=T;DP=69;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=3.85;HRun;HaplotypeScore=0.5784;MQ=37.77;MQ0=0;Map20=1;OAnc=T;QD=35.21;TS=HPGOMC;TSseq=T,T,T,A,T,T;bSC=923;mSC=1.000;pSC=0.921	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1406,108,0:20,19:0,0:0,0:0,0:0:37.77:0;1/1:30:90.29:1177,90,0:13,17:0,0:0,0:0,0:0:37.00:0	-
6_32906716_T/C	6	32906716	C	ENSG00000242574	ENST00000416244	Transcript	NON_SYNONYMOUS_CODING	277	82	28	T/A	Acc/Gcc	-	ENSP=ENSP00000391010;PolyPhen=benign(0.005);SIFT=tolerated(0.12);HGNC=HLA-DMB	T	C/C,C/C	T	T	T	N/N,N/N	rs115374159	0.98	.	-1.89	0.075	0.154	923	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=T;DP=57;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=-1.89;HRun=0;HaplotypeScore=0.9997;MQ=37.85;MQ0=0;Map20=1;OAnc=T;QD=34.57;TS=HPGOMC;TSseq=T,A,T,T,T,T;bSC=923;mSC=0.075;pSC=0.154	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:96.30:1243,96,0:0,1:17,17:0,0:0,0:0:37.85:0;1/1:22:66.20:843,66,0:0,0:10,12:0,0:0,0:0:37.00:0	-
6_32917411_C/T	6	32917411	T	ENSG00000204257	ENST00000374843	Transcript	NON_SYNONYMOUS_CODING	715	629	210	R/H	cGc/cAc	-	ENSP=ENSP00000363976;PolyPhen=benign(0.035);SIFT=tolerated(0.07);HGNC=HLA-DMA	C	T/T,T/T	C	C	C	N/N,N/N	rs41555121	0.98	CpG	2.2	0.639	0.963	923	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=101;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=2.2;HRun=0;HaplotypeScore=0.0000;MQ=37.52;MQ0=0;Map20=1;OAnc=C;QD=36.25;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=923;mSC=0.639;pSC=0.963	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2136,163,0:0,0:0,0:0,0:35,23:0:37.52:0;1/1:43:99:1676,129,0:0,0:0,0:0,0:26,17:0:37.00:0	-
6_32917498_C/G	6	32917498	G	ENSG00000204257	ENST00000374843	Transcript	NON_SYNONYMOUS_CODING	628	542	181	G/A	gGa/gCa	-	ENSP=ENSP00000363976;PolyPhen=possibly_damaging(0.454);SIFT=deleterious(0.03);HGNC=HLA-DMA	C	G/G,G/G	C	C	C	N/N,N/N	rs6926628	0.98	.	4.27	0.832	0.814	923	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;BaseQRankSum=1.310;CAnc=C;DP=66;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=4.27;HRun=0;HaplotypeScore=1.9977;MQ=39.09;MQ0=0;MQRankSum=-1.564;Map20=1;OAnc=C;QD=35.24;ReadPosRankSum=-0.465;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=923;mSC=0.832;pSC=0.814	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:89.95:1513,90,0:0,0:1,0:21,19:1,0:0:39.09:0;1/1:24:72.23:939,72,0:0,0:0,0:10,14:0,0:0:37.00:0	-
6_32945625_C/T	6	32945625	T	ENSG00000204256	ENST00000374825	Transcript	NON_SYNONYMOUS_CODING	3122	1421	474	A/V	gCc/gTc	-	ENSP=ENSP00000363958;PolyPhen=benign(0.003);SIFT=tolerated(0.44);HGNC=BRD2	C	T/T,T/T	C	C	-	N/N,N/N	rs114171019	0.98	.	2.73	0.969	0.952	923	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=1.088;CAnc=C;DP=69;Dels=0.00;EUR_AF=0.04;FS=3.928;GAnc=C;GRP=2.73;HRun=0;HaplotypeScore=0.0000;MQ=37.65;MQ0=0;MQRankSum=1.330;Map20=1;QD=33.35;ReadPosRankSum=0.846;TS=HPGMC;TSseq=C,C,C,C,C;bSC=923;mSC=0.969;pSC=0.952	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:86.40:1567,86,0:0,0:0,1:0,0:27,17:0:37.65:0;1/1:23:69.23:917,69,0:0,0:0,0:0,0:14,9:0:37.00:0	+
6_34512064_C/T	6	34512064	T	ENSG00000124664	ENST00000374037	Transcript	NON_SYNONYMOUS_CODING	584	169	57	A/T	Gcc/Acc	-	ENSP=ENSP00000363149;PolyPhen=benign(0.011);SIFT=tolerated(0.15);HGNC=SPDEF	C	T/T,T/T	C	C	C	N/N,N/N	rs2233639	0.91	CpG	-1.44	0.035	0.649	626	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.19;AMR_AF=0.07;AN=4;ASN_AF=0.10;BaseQRankSum=-0.053;CAnc=C;CpG;DP=50;Dels=0.00;EUR_AF=0.01;FS=3.724;GAnc=C;GRP=-1.44;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=C;QD=36.03;ReadPosRankSum=0.158;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=626;mSC=0.035;pSC=0.649	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:59.32:1222,59,0:0,0:1,0:0,0:13,17:0:37.00:0;1/1:17:48.14:614,48,0:0,0:0,0:0,0:6,11:0:37.00:0	-
6_34826672_A/G	6	34826672	G	ENSG00000065060	ENST00000192788	Transcript	NON_SYNONYMOUS_CODING	2710	2539	847	R/G	Agg/Ggg	-	ENSP=ENSP00000192788;PolyPhen=benign(0);SIFT=tolerated(0.41);HGNC=UHRF1BP1	A	G/G,G/G	A	A	A	N/N,N/N	rs75133930	1.0	.	1.77	0.001	0.955	292	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=A;DP=50;Dels=0.00;FS=0.000;GAnc=A;GRP=1.77;HRun=2;HaplotypeScore=0.0000;MQ=38.96;MQ0=0;Map20=1;OAnc=A;QD=37.79;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=292;mSC=0.001;pSC=0.955	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:90.27:1167,90,0:0,0:0,0:13,17:0,0:0:38.96:0;1/1:20:60.18:776,60,0:0,0:0,0:8,12:0,0:0:37.00:0	+
6_34839431_T/A	6	34839431	A	ENSG00000065060	ENST00000192788	Transcript	NON_SYNONYMOUS_CODING	4223	4052	1351	V/E	gTg/gAg	-	ENSP=ENSP00000192788;PolyPhen=possibly_damaging(0.772);SIFT=deleterious(0);HGNC=UHRF1BP1	T	A/A,A/A	T	T	T	N/N,N/N	rs35032786	0.99	.	6.08	0.994	0.982	290	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;ASN_AF=0.02;CAnc=T;DP=86;Dels=0.00;FS=0.000;GAnc=T;GRP=6.08;HRun=0;HaplotypeScore=3.9871;MQ=36.83;MQ0=0;Map20=1;OAnc=T;QD=38.31;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=290;mSC=0.994;pSC=0.982	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2293,175,0:32,26:0,0:0,0:1,0:0:36.83:0;1/1:27:81.26:1074,81,0:16,11:0,0:0,0:0,0:0:37.00:0	+
6_39398931_C/T	6	39398931	T	ENSG00000164627	ENST00000229913	Transcript	NON_SYNONYMOUS_CODING	159	5	2	R/K	aGa/aAa	-	ENSP=ENSP00000229913;PolyPhen=benign(0.001);SIFT=tolerated(0.15);HGNC=KIF6	C	T/T,T/T	C	C	C	N/N,N/N	rs61748649	0.99	.	2.68	1.000	0.745	887	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.02;AN=4;CAnc=C;DP=103;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=2.68;HRun;HaplotypeScore=1.9786;MQ=39.82;MQ0=0;Map20=1;OAnc=C;QD=37.78;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=887;mSC=1.000;pSC=0.745	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:72:99:2753,214,0:0,0:0,0:0,0:35,36:0:39.82:0;1/1:31:93.30:1215,93,0:0,0:0,0:0,0:17,14:0:37.00:0	-
6_46111057_T/C	6	46111057	C	ENSG00000001561	ENST00000321037	Transcript	NON_SYNONYMOUS_CODING	1301	1042	348	F/L	Ttt/Ctt	-	ENSP=ENSP00000318066;PolyPhen=probably_damaging(0.997);SIFT=tolerated(0.36);HGNC=ENPP4	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	5.9	0.818	0.975	535	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=70;Dels=0.00;FS=0.000;GAnc=T;GRP=5.9;HRun=0;HaplotypeScore=1.9995;MQ=39.71;MQ0=0;Map20=1;OAnc=T;QD=38.01;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=535;mSC=0.818;pSC=0.975	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1667,126,0:0,0:18,24:0,1:0,0:0:39.71:0;1/1:27:81.26:1054,81,0:0,0:12,15:0,0:0,0:0:37.00:0	+
6_49518599_T/C	6	49518599	C	ENSG00000197261	ENST00000529246	Transcript	NON_SYNONYMOUS_CODING	487	94	32	F/L	Ttt/Ctt	-	ENSP=ENSP00000434602;PolyPhen=benign(0.321);SIFT=tolerated(0.44);HGNC=C6orf141	T	C/C,C/C	T	T	T	N/N,N/N	rs45551532	0.96	.	3.27	0.001	0.118	772	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=T;DP=42;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=T;GRP=3.27;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=36.81;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=772;mSC=0.001;pSC=0.118	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:87.27:1137,87,0:0,0:22,8:0,0:0,0:0:37.00:0;1/1:12:36.12:473,36,0:0,0:6,6:0,0:0,0:0:37.00:0	+
6_51732719_C/G	6	51732719	G	ENSG00000170927	ENST00000340994	Transcript	NON_SYNONYMOUS_CODING	7936	7675	2559	V/L	Gtt/Ctt	-	ENSP=ENSP00000341097;PolyPhen=benign(0.001);SIFT=tolerated(0.5);HGNC=PKHD1	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	-2.48	0.894	0.870	567	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.606;CAnc=C;DP=82;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.48;HRun=0;HaplotypeScore=0.0000;MQ=37.43;MQ0=0;MQRankSum=1.871;Map20=1;OAnc=C;QD=35.52;ReadPosRankSum=-0.922;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=567;mSC=0.894;pSC=0.870	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:61.44:1702,61,0:0,0:1,1:24,20:0,0:0:37.43:0;1/1:35:99:1375,105,0:0,0:0,0:21,14:0,0:0:37.00:0	-
6_64004844_C/T	6	64004844	T	ENSG00000146166	ENST00000370657	Transcript	NON_SYNONYMOUS_CODING	171	137	46	G/E	gGa/gAa	-	ENSP=ENSP00000359691;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=LGSN	C	T/T,T/T	C	C	C	N/N,N/N	rs35691434	0.97	.	1.02	.	.	654	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.13;AMR_AF=0.01;AN=4;CAnc=C;DP=102;Dels=0.00;FS=0.000;GAnc=C;GRP=1.02;HRun;HaplotypeScore=4.9976;MQ=38.06;MQ0=0;Map20=1;OAnc=C;QD=38.18;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=654	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2171,166,0:0,0:0,0:0,0:18,38:0:38.06:0;1/1:46:99:1820,138,0:0,0:0,0:0,0:26,20:0:37.00:0	-
6_107780479_C/G	6	107780479	G	ENSG00000164494	ENST00000369031	Transcript	NON_SYNONYMOUS_CODING	290	11	4	R/P	cGg/cCg	-	ENSP=ENSP00000358027;PolyPhen=probably_damaging(0.952);SIFT=deleterious(0);HGNC=PDSS2	C	G/G,G/G	C	C	C	N/N,N/N	rs3734676	0.97	CpG	1.17	1.000	0.798	720	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.01;AN=4;ASN_AF=0.11;CAnc=C;CpG;DP=53;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=1.17;HRun;HaplotypeScore=0.0000;MQ=38.03;MQ0=0;Map20=1;OAnc=C;QD=38.65;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=720;mSC=1.000;pSC=0.798	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.28:1154,87,0:0,0:0,0:18,11:0,0:0:38.03:0;1/1:24:72.23:945,72,0:0,0:0,0:14,10:0,0:0:37.00:0	-
6_109480425_C/A	6	109480425	A	ENSG00000183137	ENST00000368970	Transcript	NON_SYNONYMOUS_CODING	877	827	276	T/N	aCc/aAc	-	ENSP=ENSP00000357966;PolyPhen=benign(0.023);SIFT=deleterious(0.01);HGNC=CEP57L1	C	A/A,A/A	C	C	C	N/N,N/N	rs79037789	0.99	.	2.82	0.249	0.018	552	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=C;DP=96;Dels=0.00;FS=0.000;GAnc=C;GRP=2.82;HRun;HaplotypeScore=2.9328;MQ=38.03;MQ0=0;Map20=1;OAnc=C;QD=37.02;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=552;mSC=0.249;pSC=0.018	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2180,169,0:24,33:0,0:0,0:0,0:0:38.03:0;1/1:38:99:1468,111,0:19,19:0,0:0,0:0,0:0:37.00:0	+
6_109802832_C/G	6	109802832	G	ENSG00000112365	ENST00000230122	Transcript	NON_SYNONYMOUS_CODING	566	398	133	S/T	aGc/aCc	-	ENSP=ENSP00000230122;PolyPhen=benign(0.098);SIFT=tolerated(0.48);HGNC=ZBTB24	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	1.55	0.037	0.946	244	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=82;Dels=0.00;FS=0.000;GAnc=C;GRP=1.55;HRun;HaplotypeScore=0.0000;MQ=41.62;MQ0=0;Map20=1;OAnc=C;QD=36.69;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=244;mSC=0.037;pSC=0.946	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1611,123,0:0,1:0,0:15,27:0,0:0:41.62:0;1/1:39:99:1469,114,0:0,0:0,0:19,20:0,0:0:37.00:0	-
6_117010525_G/A	6	117010525	A	ENSG00000196911	ENST00000356348	Transcript	NON_SYNONYMOUS_CODING	178	47	16	S/N	aGt/aAt	-	ENSP=ENSP00000348704;PolyPhen=benign(0.006);SIFT=tolerated(0.85);HGNC=KPNA5	G	A/A,A/A	G	G	G	N/N,N/N	rs137898003	1.0	.	4.3	0.998	0.894	373	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.02;AN=4;CAnc=G;DP=92;Dels=0.00;FS=0.000;GAnc=G;GRP=4.3;HRun=4;HaplotypeScore=0.0000;MQ=37.48;MQ0=0;Map20=1;OAnc=G;QD=38.65;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=373;mSC=0.998;pSC=0.894	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2429,184,0:42,19:0,0:0,0:0,0:0:37.48:0;1/1:30:90.30:1199,90,0:17,13:0,0:0,0:0,0:0:37.00:0	+
6_137519238_A/G	6	137519238	G	ENSG00000027697	ENST00000367739	Transcript	NON_SYNONYMOUS_CODING	1522	1400	467	L/P	cTt/cCt	-	ENSP=ENSP00000356713;PolyPhen=benign(0.104);SIFT=tolerated(0.14);HGNC=IFNGR1	A	G/G,G/G	A	A	A	N/N,N/N	rs1887415	0.98	.	1.96	0.323	0.110	900	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.03;CAnc=A;DP=63;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=1.96;HRun;HaplotypeScore=0.0000;MQ=37.77;MQ0=0;Map20=1;OAnc=A;QD=38.84;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=900;mSC=0.323;pSC=0.110	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1548,117,0:0,0:0,0:23,16:0,0:0:37.77:0;1/1:24:72.23:952,72,0:0,0:0,0:15,9:0,0:0:37.00:0	-
6_146185565_G/T	6	146185565	T	ENSG00000146414	ENST00000367507	Transcript	NON_SYNONYMOUS_CODING	1392	362	121	S/Y	tCc/tAc	-	ENSP=ENSP00000356477;PolyPhen=benign(0.01);SIFT=deleterious(0.01);HGNC=SHPRH	G	T/T,T/T	G	G	G	N/N,N/N	rs117306655	0.98	.	-0.878	0.002	0.162	272	0.333333	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.06;BaseQRankSum=-0.627;CAnc=G;DP=74;Dels=0.01;FS=4.168;GAnc=G;GRP=-0.878;HRun=0;HaplotypeScore=2.9660;MQ=40.86;MQ0;MQRankSum=-0.405;Map20=0.333333;OAnc=G;QD=32.90;ReadPosRankSum=-1.732;TS=HPGOMC;TSseq=G,G,G,G,G,-;bSC=272;mSC=0.002;pSC=0.162	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1777,101,0:0,0:0,0:1,0:22,30:0:40.86:1;1/1:20:60.20:792,60,0:0,0:0,0:0,0:9,11:0:38.07:0	-
6_151336663_G/A	6	151336663	A	ENSG00000120254	ENST00000367321	Transcript	NON_SYNONYMOUS_CODING	2694	2420	807	R/H	cGc/cAc	-	ENSP=ENSP00000356290;PolyPhen=possibly_damaging(0.672);SIFT=tolerated(0.08);HGNC=MTHFD1L	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	5.1	0.928	0.958	907	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.733;CAnc=G;CpG;DP=90;Dels=0.00;FS=0.000;GAnc=G;GRP=5.1;HRun=0;HaplotypeScore=2.9992;MQ=38.08;MQ0=0;MQRankSum=-0.200;Map20=1;OAnc=G;QD=35.27;ReadPosRankSum=-0.133;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=907;mSC=0.928;pSC=0.958	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:1973,117,0:32,22:0,0:1,0:0,0:0:38.08:0;1/1:35:99:1390,105,0:16,19:0,0:0,0:0,0:0:36.71:0	+
6_167754975_G/T	6	167754975	T	ENSG00000120440	ENST00000239587	Transcript	NON_SYNONYMOUS_CODING	1675	1587	529	Q/H	caG/caT	-	ENSP=ENSP00000239587;PolyPhen=possibly_damaging(0.792);SIFT=deleterious(0);HGNC=TTLL2	G	T/T,T/T	G	G	G	N/N,N/N	rs12528714	0.96	.	0.779	0.000	0.015	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.09;AN=4;ASN_AF=0.07;CAnc=G;DP=55;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=0.779;HRun;HaplotypeScore=1.9916;MQ=38.73;MQ0=0;Map20=1;OAnc=G;QD=38.10;TS=HPGOM;TSseq=G,G,G,G,G;mSC=0.000;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1328,102,0:0,0:0,0:0,0:20,13:0:38.73:0;1/1:21:63.20:827,63,0:0,0:0,0:0,0:9,12:0:37.00:0	+
6_170034604_T/C	6	170034604	C	ENSG00000184465	ENST00000333572	Transcript	NON_SYNONYMOUS_CODING	2541	2021	674	K/R	aAg/aGg	-	ENSP=ENSP00000330265;PolyPhen=benign(0.002);SIFT=tolerated(0.86);HGNC=WDR27	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-1.85	0.000	0.406	840	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=67;Dels=0.00;FS=0.000;GAnc=T;GRP=-1.85;HRun;HaplotypeScore=0.0000;MQ=37.71;MQ0=0;Map20=1;OAnc=T;QD=38.27;TS=HPGOMC;TSseq=T,T,T,-,T,T;bSC=840;mSC=0.000;pSC=0.406	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1640,126,0:0,0:17,23:0,0:0,0:0:37.71:0;1/1:25:75.25:994,75,0:0,0:13,12:0,0:0,0:0:37.00:0	-
7_1132691_C/T	7	1132691	T	ENSG00000164850	ENST00000342452	Transcript	NON_SYNONYMOUS_CODING	118	118	40	L/F	Ctc/Ttc	-	ENSP=ENSP00000341512;PolyPhen=unknown(0);HGNC=GPER	C	T/T,T/T	C	C	C	N/N,N/N	rs1133041	0.94	.	-1.12	0.000	0.007	851	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AMR_AF=0.01;AN=4;ASN_AF=0.21;CAnc=C;DP=69;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-1.12;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.61;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=851;mSC=0.000;pSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1423,108,0:0,0:0,0:0,0:22,14:0:37.00:0;1/1:33:96.31:1272,96,0:0,0:0,0:0,0:16,17:0:37.00:0	+
7_2473130_G/C	7	2473130	C	ENSG00000136213	ENST00000258711	Transcript	NON_SYNONYMOUS_CODING	991	856	286	A/P	Gcc/Ccc	-	ENSP=ENSP00000258711;PolyPhen=probably_damaging(0.948);SIFT=tolerated(0.07);HGNC=CHST12	G	C/C,C/C	G	G	G	N/N,N/N	.	1.0	CpG	0.572	0.311	0.956	856	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=0.572;HRun=3;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.45;TS=HPGOC;TSseq=G,G,G,G,G;bSC=856;mSC=0.311;pSC=0.956	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1531,120,0:0,0:16,23:0,0:0,0:0:37.00:0;1/1:12:36.12:480,36,0:0,0:9,3:0,0:0,0:0:37.00:0	+
7_2578238_C/T	7	2578238	T	ENSG00000106009	ENST00000340611	Transcript	NON_SYNONYMOUS_CODING	2188	1931	644	R/Q	cGa/cAa	-	ENSP=ENSP00000339637;PolyPhen=benign(0.004);SIFT=tolerated(0.46);HGNC=BRAT1	C	T/T,T/T	C	C	C	N/N,N/N	rs62907961	0.92	CpG	1.39	.	0.464	873	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.02;AMR_AF=0.15;AN=4;CAnc=C;CpG;DP=44;Dels=0.00;EUR_AF=0.15;FS=0.000;GAnc=C;GRP=1.39;HRun;HaplotypeScore=0.9867;MQ=40.66;MQ0=0;Map20=1;OAnc=C;QD=35.87;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=873;pSC=0.464	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1253,99,0:0,0:0,0:0,0:14,19:0:40.66:0;1/1:10:30.10:392,30,0:0,0:0,0:0,0:5,5:0:37.00:0	-
7_11676519_G/C	7	11676519	C	ENSG00000005108	ENST00000262042	Transcript	NON_SYNONYMOUS_CODING	512	260	87	A/G	gCt/gGt	-	ENSP=ENSP00000262042;PolyPhen=possibly_damaging(0.873);SIFT=deleterious(0.02);HGNC=THSD7A	G	C/C,C/C	G	G	G	N/N,N/N	.	1	.	6.02	0.988	0.923	928	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=60;Dels=0.00;FS=0.000;GAnc=G;GRP=6.02;HRun;HaplotypeScore=0.0000;MQ=40.30;MQ0=0;Map20=1;OAnc=G;QD=36.57;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=928;mSC=0.988;pSC=0.923	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1313,102,0:0,0:11,23:0,0:0,1:0:40.30:0;1/1:25:75.24:968,75,0:0,0:8,17:0,0:0,0:0:36.60:0	-
7_21598500_A/G	7	21598500	G	ENSG00000105877	ENST00000328843	Transcript	NON_SYNONYMOUS_CODING	607	576	192	I/M	atA/atG	-	ENSP=ENSP00000330671;PolyPhen=benign(0.107);SIFT=tolerated(0.07);HGNC=DNAH11	A	G/G,G/G	A	A	A	N/N,N/N	rs72655972	0.98	.	4.89	0.997	0.940	695	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.04;AN=4;ASN_AF=0.06;CAnc=A;DP=75;Dels=0.00;FS=0.000;GAnc=A;GRP=4.89;HRun;HaplotypeScore=0.9332;MQ=36.78;MQ0=0;Map20=1;OAnc=A;QD=37.70;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=695;mSC=0.997;pSC=0.940	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1767,135,0:0,0:0,0:32,14:0,0:0:36.78:0;1/1:29:87.28:1135,87,0:0,0:0,0:16,13:0,0:0:37.00:0	+
7_21788239_C/G	7	21788239	G	ENSG00000105877	ENST00000328843	Transcript	NON_SYNONYMOUS_CODING	8604	8573	2858	A/G	gCt/gGt	-	ENSP=ENSP00000330671;PolyPhen=possibly_damaging(0.531);SIFT=deleterious(0);HGNC=DNAH11	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	5.15	0.298	0.913	764	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=60;Dels=0.00;FS=0.000;GAnc=C;GRP=5.15;HRun;HaplotypeScore=0.0000;MQ=39.06;MQ0=0;Map20=1;OAnc=C;QD=38.18;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=764;mSC=0.298;pSC=0.913	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1484,114,0:0,0:0,0:18,20:0,0:0:39.06:0;1/1:22:66.21:852,66,0:0,0:0,0:8,14:0,0:0:37.00:0	+
7_23313149_C/T	7	23313149	T	ENSG00000136235	ENST00000258733	Transcript	NON_SYNONYMOUS_CODING	1734	1439	480	S/L	tCg/tTg	-	ENSP=ENSP00000258733;PolyPhen=benign(0.375);SIFT=deleterious(0.01);HGNC=GPNMB	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	0.634	0.000	0.267	501	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;CpG;DP=67;Dels=0.00;FS=0.000;GAnc=C;GRP=0.634;HRun;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.16;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=501;mSC=0.000;pSC=0.267	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1827,138,0:0,0:0,0:0,0:15,31:0:37.00:0;1/1:20:60.20:789,60,0:0,0:0,0:0,0:9,11:0:37.00:0	+
7_23313162_G/A	7	23313162	A	ENSG00000136235	ENST00000258733	Transcript	NON_SYNONYMOUS_CODING	1747	1452	484	M/I	atG/atA	-	ENSP=ENSP00000258733;PolyPhen=benign(0.002);SIFT=tolerated(0.35);HGNC=GPNMB	G	A/A,A/A	G	G	G	N/N,N/N	.	1.0	.	-3.77	0.000	0.367	501	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;DP=72;Dels=0.00;FS=0.000;GAnc=G;GRP=-3.77;HRun=0;HaplotypeScore=0.0000;MQ=37.64;MQ0=0;Map20=1;OAnc=G;QD=37.14;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=501;mSC=0.000;pSC=0.367	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1779,135,0:15,31:0,0:0,0:0,0:0:37.64:0;1/1:25:75.24:990,75,0:10,15:0,0:0,0:0,0:0:37.00:0	+
7_29606333_T/C	7	29606333	C	ENSG00000176532	ENST00000319694	Transcript	STOP_LOST	1100	388	130	*/Q	Tag/Cag	-	ENSP=ENSP00000317836;HGNC=PRR15	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	5.43	0.138	0.444	829	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=51;Dels=0.00;FS=0.000;GAnc=T;GRP=5.43;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=37.71;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=829;mSC=0.138;pSC=0.444	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.26:1240,96,0:0,0:15,17:0,0:0,0:0:37.00:0;1/1:19:57.18:748,57,0:0,0:5,14:0,0:0,0:0:37.00:0	+
7_30795448_G/A	7	30795448	A	ENSG00000241644	ENST00000013222	Transcript	NON_SYNONYMOUS_CODING	789	773	258	R/H	cGc/cAc	-	ENSP=ENSP00000013222;PolyPhen=possibly_damaging(0.764);SIFT=deleterious(0);HGNC=INMT	G	A/A,A/A	G	G	G	N/N,N/N	rs6970605	0.96	CpG	2.51	0.075	0.553	917	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.14;AMR_AF=0.01;AN=4;BaseQRankSum=1.073;CAnc=G;CpG;DP=68;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=2.51;HRun=0;HaplotypeScore=4.8552;MQ=38.64;MQ0=0;MQRankSum=-0.578;Map20=1;OAnc=G;QD=36.55;ReadPosRankSum=1.568;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=917;mSC=0.075;pSC=0.553	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:86.40:1568,86,0:26,14:0,0:1,0:0,0:0:38.64:0;1/1:26:78.25:1026,78,0:12,14:0,0:0,0:0,0:0:37.00:0	+
7_38433726_T/G	7	38433726	G	ENSG00000078053	ENST00000325590	Transcript	NON_SYNONYMOUS_CODING	1430	1361	454	K/T	aAg/aCg	-	ENSP=ENSP00000317441;PolyPhen=benign(0.058);SIFT=tolerated(0.26);HGNC=AMPH	T	G/G,G/G	T	T	T	N/N,N/N	rs35024632	0.92	.	2.1	0.950	0.374	783	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AMR_AF=0.05;AN=4;ASN_AF=0.19;CAnc=T;DP=60;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=T;GRP=2.1;HRun=0;HaplotypeScore=2.9992;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=37.39;TS=HPGOM;TSseq=T,T,T,T,T;bSC=783;mSC=0.950;pSC=0.374	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1416,108,0:0,0:0,0:14,22:0,1:0:37.00:0;1/1:23:63.19:817,63,0:0,0:0,0:8,15:0,0:0:37.00:0	-
7_42004062_G/A	7	42004062	A	ENSG00000106571	ENST00000395925	Transcript	NON_SYNONYMOUS_CODING	4694	4609	1537	R/C	Cgc/Tgc	-	ENSP=ENSP00000379258;PolyPhen=probably_damaging(0.989);SIFT=deleterious(0.04);HGNC=GLI3	G	A/A,A/A	G	G	G	N/N,N/N	rs35364414	0.98	CpG	6.03	1.000	0.792	769	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;BaseQRankSum=0.182;CAnc=G;CpG;DP=61;Dels=0.00;EUR_AF=0.05;FS=3.493;GAnc=G;GRP=6.03;HRun=0;HaplotypeScore=1.6648;MQ=39.25;MQ0=0;MQRankSum=-1.459;Map20=1;OAnc=G;QD=35.45;ReadPosRankSum=-0.821;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=769;mSC=1.000;pSC=0.792	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:74.35:1415,74,0:21,17:0,0:0,1:0,0:0:39.25:0;1/1:22:63.21:840,63,0:10,12:0,0:0,0:0,0:0:37.00:0	-
7_42212180_C/T	7	42212180	T	ENSG00000106571	ENST00000437480	Transcript	NON_SYNONYMOUS_CODING	361	230	77	G/E	gGa/gAa	-	ENSP=ENSP00000407963;PolyPhen=unknown(0);HGNC=GLI3	C	T/T,T/T	C	C	C	N/N,N/N	rs2286293	0.92	.	0.415	0.000	0.099	929	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.05;AMR_AF=0.11;AN=4;ASN_AF=0.04;CAnc=C;DP=73;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=C;GRP=0.415;HRun;HaplotypeScore=0.9979;MQ=38.38;MQ0=0;Map20=1;OAnc=C;QD=37.75;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=929;mSC=0.000;pSC=0.099	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1656,126,0:0,0:0,0:0,0:19,24:0:38.38:0;1/1:30:90.29:1171,90,0:0,0:0,0:0,0:14,16:0:37.00:0	-
7_44747578_G/A	7	44747578	A	ENSG00000105953	ENST00000222673	Transcript	NON_SYNONYMOUS_CODING	3094	3052	1018	V/I	Gtc/Atc	-	ENSP=ENSP00000222673;PolyPhen=benign(0.019);SIFT=deleterious(0.02);HGNC=OGDH	G	A/A,A/A	G	G	G	N/N,N/N	rs2070607	0.95	CpG	4.12	0.997	0.390	698	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.05;AMR_AF=0.06;AN=4;ASN_AF=0.08;CAnc=G;CpG;DP=62;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=4.12;HRun=0;HaplotypeScore=0.0000;MQ=36.78;MQ0=0;Map20=1;OAnc=G;QD=37.03;TS=HPGO;TSseq=G,G,G,A;bSC=698;mSC=0.997;pSC=0.390	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1737,132,0:27,19:0,0:0,0:0,0:0:36.78:0;1/1:16:48.16:640,48,0:11,5:0,0:0,0:0,0:0:37.00:0	+
7_45217015_T/C	7	45217015	C	ENSG00000122679	ENST00000242249	Transcript	NON_SYNONYMOUS_CODING	204	166	56	W/R	Tgg/Cgg	-	ENSP=ENSP00000242249;PolyPhen=probably_damaging(1);SIFT=deleterious(0);HGNC=RAMP3	T	C/C,C/C	T	T	T	N/N,N/N	rs2074654	0.94	.	1.79	0.998	0.900	867	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.02;AMR_AF=0.09;AN=4;ASN_AF=0.10;CAnc=T;DP=67;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=1.79;HRun=0;HaplotypeScore=0.9997;MQ=39.22;MQ0=0;Map20=1;OAnc=T;QD=38.62;TS=HPGOMC;TSseq=T,C,T,T,T,T;bSC=867;mSC=0.998;pSC=0.900	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1732,132,0:0,0:20,24:0,0:0,0:0:39.22:0;1/1:23:69.22:911,69,0:0,0:12,11:0,0:0,0:0:37.00:0	+
7_48065476_A/G	7	48065476	G	ENSG00000164744	ENST00000297325	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	342	182	61	V/A	gTa/gCa	-	ENSP=ENSP00000297325;PolyPhen=benign(0.029);SIFT=deleterious(0);HGNC=SUN3	A	G/G,G/G	A	A	A	N/N,N/N	rs111512605	1.0	.	5.18	0.581	0.888	762	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-1.431;CAnc=A;DP=73;Dels=0.00;FS=0.000;GAnc=A;GRP=5.18;HRun=0;HaplotypeScore=0.9997;MQ=40.14;MQ0=0;MQRankSum=1.130;Map20=1;OAnc=A;QD=36.66;ReadPosRankSum=0.000;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=762;mSC=0.581;pSC=0.888	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:98.43:1719,98,0:1,0:0,0:25,18:0,0:0:40.14:0;1/1:27:81.26:1054,81,0:0,0:0,0:11,16:0,0:0:37.00:0	-
7_51096830_C/G	7	51096830	G	ENSG00000106078	ENST00000265136	Transcript	NON_SYNONYMOUS_CODING	2129	1963	655	A/P	Gct/Cct	-	ENSP=ENSP00000265136;PolyPhen=benign(0.345);SIFT=tolerated(0.11);HGNC=COBL	C	G/G,G/G	C	C	C	N/N,N/N	rs112568753	0.98	.	-1.78	.	0.244	846	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.06;AMR_AF=0.06;AN=4;CAnc=C;DP=83;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.78;HRun;HaplotypeScore=0.0000;MQ=37.54;MQ0=0;Map20=1;OAnc=C;QD=38.01;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=846;pSC=0.244	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2123,163,0:0,0:0,0:14,40:0,0:0:37.54:0;1/1:28:84.27:1098,84,0:0,0:0,0:18,10:0,0:0:37.00:0	-
7_51096913_G/A	7	51096913	A	ENSG00000106078	ENST00000265136	Transcript	NON_SYNONYMOUS_CODING	2046	1880	627	T/M	aCg/aTg	-	ENSP=ENSP00000265136;PolyPhen=benign(0.007);SIFT=tolerated(0.12);HGNC=COBL	G	A/A,A/A	G	G	G	N/N,N/N	rs146220939	0.99	CpG	-11	.	0.067	846	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.06;AN=4;CAnc=G;CpG;DP=81;Dels=0.00;FS=0.000;GAnc=G;GRP=-11;HRun=0;HaplotypeScore=2.7618;MQ=37.96;MQ0=0;Map20=1;OAnc=G;QD=38.16;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=846;pSC=0.067	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2399,184,0:28,33:0,0:0,0:0,0:0:37.96:0;1/1:19:57.19:747,57,0:12,7:0,0:0,0:0,0:0:37.00:0	-
7_73731971_C/T	7	73731971	T	ENSG00000106665	ENST00000223398	Transcript	NON_SYNONYMOUS_CODING	422	95	32	A/V	gCg/gTg	-	ENSP=ENSP00000223398;PolyPhen=benign(0.002);SIFT=tolerated(0.3);HGNC=CLIP2	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	2.58	0.003	0.140	895	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=67;Dels=0.00;FS=0.000;GAnc=C;GRP=2.58;HRun=0;HaplotypeScore=0.9973;MQ=38.38;MQ0=0;Map20=1;OAnc=C;QD=36.10;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=895;mSC=0.003;pSC=0.140	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1585,123,0:0,0:1,0:0,0:25,15:0:38.38:0;1/1:24:72.23:950,72,0:0,0:0,0:0,0:14,10:0:37.00:0	+
7_82582258_T/G	7	82582258	G	ENSG00000186472	ENST00000333891	Transcript	NON_SYNONYMOUS_CODING	8349	8011	2671	T/P	Act/Cct	-	ENSP=ENSP00000334319;PolyPhen=unknown(0);HGNC=PCLO	T	G/G,G/G	T	T	T	N/N,N/N	rs10261848	0.95	.	-0.945	0.001	0.301	523	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.19;AMR_AF=0.02;AN=4;CAnc=T;DP=90;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.945;HRun;HaplotypeScore=1.5781;MQ=37.54;MQ0=0;Map20=1;OAnc=T;QD=38.49;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=523;mSC=0.001;pSC=0.301	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2150,163,0:0,0:0,0:25,30:0,0:0:37.54:0;1/1:35:99:1367,105,0:0,0:0,0:19,16:0,0:0:37.00:0	-
7_82583280_C/T	7	82583280	T	ENSG00000186472	ENST00000333891	Transcript	NON_SYNONYMOUS_CODING	7327	6989	2330	R/Q	cGa/cAa	-	ENSP=ENSP00000334319;PolyPhen=unknown(0);HGNC=PCLO	C	T/T,T/T	C	C	A	N/N,N/N	rs17148149	0.93	CpG	-0.0138	0.001	0.128	529	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.28;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=90;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.0138;HRun=2;HaplotypeScore=1.9971;MQ=38.08;MQ0=0;Map20=1;OAnc=A;QD=39.33;TS=HPGOMC;TSseq=C,A,C,A,A,N;bSC=529;mSC=0.001;pSC=0.128	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2196,166,0:0,0:0,0:0,0:21,34:0:38.08:0;1/1:35:99:1373,105,0:0,0:0,0:0,0:18,17:0:37.00:0	-
7_99117452_C/T	7	99117452	T	ENSG00000196652	ENST00000326775	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	679	556	186	L/F	Ctt/Ttt	-	ENSP=ENSP00000322872;PolyPhen=possibly_damaging(0.628);SIFT=deleterious(0.03);HGNC=ZKSCAN5	C	T/T,T/T	C	C	C	N/N,N/N	rs73711300	1.0	.	3.24	0.984	0.946	185	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=82;Dels=0.00;FS=0.000;GAnc=C;GRP=3.24;HRun=2;HaplotypeScore=1.9662;MQ=39.17;MQ0=0;Map20=1;OAnc=C;QD=36.55;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=185;mSC=0.984;pSC=0.946	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2007,156,0:0,0:0,0:0,0:25,27:0:39.17:0;1/1:28:81.27:1075,81,0:0,0:0,0:0,0:9,19:0:37.00:0	+
7_99128842_T/G	7	99128842	G	ENSG00000196652	ENST00000326775	Transcript	NON_SYNONYMOUS_CODING	1613	1490	497	V/G	gTt/gGt	-	ENSP=ENSP00000322872;PolyPhen=benign(0.343);SIFT=tolerated(0.41);HGNC=ZKSCAN5	T	G/G,G/G	T	T	T	N/N,N/N	rs60466806	1.0	.	-2.35	0.008	0.080	184	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-0.843;CAnc=T;DP=108;Dels=0.00;FS=3.129;GAnc=T;GRP=-2.35;HRun;HaplotypeScore=2.9889;MQ=38.57;MQ0=0;MQRankSum=0.843;Map20=1;OAnc=T;QD=37.05;ReadPosRankSum=0.234;TS=HPGOMC;TSseq=T,T,T,T,T,G;bSC=184;mSC=0.008;pSC=0.080	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:75:99:2811,183,0:1,0:0,0:37,33:0,1:0:38.57:0;1/1:33:99:1279,99,0:0,0:0,0:17,16:0,0:0:37.00:0	+
7_99474007_T/C	7	99474007	C	ENSG00000244623	ENST00000316368	Transcript	NON_SYNONYMOUS_CODING	674	650	217	Y/C	tAt/tGt	-	ENSP=ENSP00000313936;PolyPhen=probably_damaging(0.999);SIFT=deleterious(0);HGNC=OR2AE1	T	C/C,C/C	T	T	-	N/N,N/N	rs60737583	0.94	.	3.62	0.050	0.168	351	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.26;AMR_AF=0.03;AN=4;CAnc=T;DP=95;Dels=0.00;FS=0.000;GAnc=T;GRP=3.62;HRun=0;HaplotypeScore=0.0000;MQ=38.87;MQ0=0;Map20=1;QD=38.76;TS=HPGM;TSseq=T,T,T,T;bSC=351;mSC=0.050;pSC=0.168	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2475,190,0:0,0:32,31:0,0:0,0:0:38.87:0;1/1:32:96.32:1278,96,0:0,0:17,15:0,0:0,0:0:37.00:0	-
7_100086231_C/T	7	100086231	T	ENSG00000166924	ENST00000300179	Transcript	NON_SYNONYMOUS_CODING	1046	887	296	P/L	cCg/cTg	-	ENSP=ENSP00000300179;PolyPhen=benign(0.043);SIFT=tolerated(0.21);HGNC=NYAP1	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	-0.164	0.000	0.310	137	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.164;HRun=0;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;Map20=1;OAnc=C;QD=38.02;TS=HPGOMC;TSseq=C,C,C,T,C,N;bSC=137;mSC=0.000;pSC=0.310	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1402,105,0:0,0:0,0:0,0:16,20:0:37.83:0;1/1:14:42.14:560,42,0:0,0:0,0:0,0:8,6:0:37.00:0	+
7_100491685_C/T	7	100491685	T	ENSG00000087085	ENST00000241069	Transcript	NON_SYNONYMOUS_CODING	276	169	57	G/R	Ggg/Agg	-	ENSP=ENSP00000241069;PolyPhen=benign(0.003);SIFT=deleterious(0.01);HGNC=ACHE	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	3.97	0.265	0.583	370	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=C;GRP=3.97;HRun=0;HaplotypeScore=0.0000;MQ=36.73;MQ0=0;Map20=1;OAnc=C;QD=34.11;TS=HPGOMC;TSseq=C,N,C,C,C,C;bSC=370;mSC=0.265;pSC=0.583	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1329,102,0:0,0:0,0:0,0:20,17:0:36.73:0;1/1:12:33.11:435,33,0:0,0:0,0:0,0:5,7:0:37.00:0	-
7_102448819_T/G	7	102448819	G	ENSG00000222011	ENST00000409231	Transcript	NON_SYNONYMOUS_CODING	978	798	266	S/R	agT/agG	-	ENSP=ENSP00000387066;PolyPhen=probably_damaging(0.938);SIFT=deleterious(0);HGNC=FAM185A	T	G/G,G/G	T	T	C	N/N,N/N	rs79250295	0.99	.	4.84	1.000	0.883	543	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;CAnc=T;DP=74;Dels=0.00;FS=0.000;GAnc=T;GRP=4.84;HRun;HaplotypeScore=0.0000;MQ=39.05;MQ0=0;Map20=1;OAnc=C;QD=37.85;TS=HPGOMC;TSseq=T,T,T,C,C,C;bSC=543;mSC=1.000;pSC=0.883	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1660,129,0:0,0:0,0:22,21:0,0:0:39.05:0;1/1:31:93.30:1234,93,0:0,0:0,0:15,16:0,0:0:37.00:0	+
7_103018910_C/T	7	103018910	T	ENSG00000170615	ENST00000306312	Transcript	NON_SYNONYMOUS_CODING	2030	1768	590	A/T	Gca/Aca	-	ENSP=ENSP00000304783;PolyPhen=benign(0.377);SIFT=tolerated(0.28);HGNC=SLC26A5	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	4.53	0.624	0.489	542	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=91;Dels=0.01;FS=0.000;GAnc=C;GRP=4.53;HRun=0;HaplotypeScore=0.0000;MQ=37.99;MQ0=0;Map20=1;OAnc=C;QD=35.11;TS=HPGOMC;TSseq=C,C,C,C,-,C;bSC=542;mSC=0.624;pSC=0.489	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2139,166,0:0,0:0,0:0,0:23,36:0:37.99:0;1/1:30:90.30:1197,90,0:0,0:0,0:0,0:13,17:0:37.00:0	-
7_103018975_A/G	7	103018975	G	ENSG00000170615	ENST00000306312	Transcript	NON_SYNONYMOUS_CODING	1965	1703	568	M/T	aTg/aCg	-	ENSP=ENSP00000304783;PolyPhen=benign(0.011);SIFT=tolerated(0.06);HGNC=SLC26A5	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	4.16	0.998	0.610	542	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.443;CAnc=A;DP=73;Dels=0.00;FS=0.000;GAnc=A;GRP=4.16;HRun=0;HaplotypeScore=0.9997;MQ=37.69;MQ0=0;MQRankSum=0.927;Map20=1;OAnc=A;QD=36.19;ReadPosRankSum=-0.685;TS=HPGOMC;TSseq=A,A,A,A,-,A;bSC=542;mSC=0.998;pSC=0.610	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.40:1589,89,0:0,1:0,0:20,22:0,0:0:37.69:0;1/1:30:50.29:1111,50,0:0,1:0,0:15,14:0,0:0:37.00:0	-
7_117432492_G/A	7	117432492	A	ENSG00000077063	ENST00000160373	Transcript	NON_SYNONYMOUS_CODING	850	758	253	T/I	aCt/aTt	-	ENSP=ENSP00000160373;PolyPhen=benign(0.062);SIFT=tolerated(0.05);HGNC=CTTNBP2	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	5.77	0.956	0.975	523	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.052;CAnc=G;DP=83;Dels=0.00;FS=0.000;GAnc=G;GRP=5.77;HRun;HaplotypeScore=0.0000;MQ=38.41;MQ0=0;MQRankSum=1.670;Map20=1;OAnc=G;QD=37.00;ReadPosRankSum=-1.299;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=523;mSC=0.956;pSC=0.975	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2105,139,0:23,32:0,0:0,1:0,0:0:38.41:0;1/1:27:81.26:1045,81,0:12,15:0,0:0,0:0,0:0:37.00:0	-
7_122338502_G/T	7	122338502	T	ENSG00000188050	ENST00000340112	Transcript	NON_SYNONYMOUS_CODING	709	471	157	N/K	aaC/aaA	-	ENSP=ENSP00000344489;PolyPhen=probably_damaging(0.999);SIFT=deleterious(0.02);HGNC=RNF133	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	5.62	0.291	0.939	576	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=123;Dels=0.00;FS=0.000;GAnc=G;GRP=5.62;HRun=2;HaplotypeScore=2.9629;MQ=38.16;MQ0=0;Map20=1;OAnc=G;QD=38.75;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=576;mSC=0.291;pSC=0.939	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:77:99:3017,232,0:0,0:0,0:0,0:39,36:0:38.16:0;1/1:46:99:1814,138,0:0,0:0,0:0,0:28,18:0:37.00:0	-
7_133812173_G/C	7	133812173	C	ENSG00000155530	ENST00000285928	Transcript	NON_SYNONYMOUS_CODING	122	53	18	R/T	aGa/aCa	-	ENSP=ENSP00000285928;PolyPhen=unknown(0);SIFT=tolerated(0.29);HGNC=LRGUK	G	C/C,C/C	G	G	G	N/N,N/N	rs143684679	1.0	.	2.47	0.003	0.410	748	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;DP=49;Dels=0.00;FS=0.000;GAnc=G;GRP=2.47;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.87;TS=HPGOMC;TSseq=G,G,G,A,G,G;bSC=748;mSC=0.003;pSC=0.410	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.29:1160,87,0:0,0:12,17:0,0:0,0:0:37.00:0;1/1:20:60.17:769,60,0:0,0:12,8:0,0:0,0:0:37.00:0	+
7_158662137_C/T	7	158662137	T	ENSG00000126870	ENST00000397143	Transcript	NON_SYNONYMOUS_CODING	1	1	1	R/C	Cgc/Tgc	-	ENSP=ENSP00000380330;PolyPhen=unknown(0);HGNC=WDR60	C	T/T,T/T	C	C	C	N/N,N/N	rs76968696	0.97	CpG	-2.97	.	0.115	856	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AN=4;ASN_AF=0.13;CAnc=C;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.97;HRun=0;HaplotypeScore=0.0000;MQ=39.50;MQ0=0;Map20=1;OAnc=C;QD=35.80;TS=HPGOMC;TSseq=C,C,C,C,C,T;bSC=856;pSC=0.115	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1286,99,0:0,0:0,0:0,0:20,14:0:39.50:0;1/1:19:57.19:758,57,0:0,0:0,0:0,0:10,9:0:37.00:0	+
8_1877480_T/G	8	1877480	G	ENSG00000104728	ENST00000262112	Transcript	NON_SYNONYMOUS_CODING	2938	2938	980	S/A	Tcc/Gcc	-	ENSP=ENSP00000262112;PolyPhen=benign(0.035);SIFT=tolerated(0.8);HGNC=ARHGEF10	T	G/G,G/G	T	T	T	N/N,N/N	rs17683288	0.97	.	2.66	1.000	0.935	934	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.05;AN=4;CAnc=T;DP=87;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=T;GRP=2.66;HRun=0;HaplotypeScore=0.9997;MQ=37.64;MQ0=0;Map20=1;OAnc=T;QD=39.12;TS=HPGOMC;TSseq=T,T,T,T,G,T;bSC=934;mSC=1.000;pSC=0.935	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1872,141,0:0,0:0,0:25,22:0,0:0:37.64:0;1/1:40:80.37:1461,80,0:0,0:0,0:16,23:0,1:0:37.00:0	+
8_6299654_T/C	8	6299654	C	ENSG00000147316	ENST00000344683	Transcript	NON_SYNONYMOUS_CODING	723	647	216	I/T	aTt/aCt	-	ENSP=ENSP00000342924;PolyPhen=possibly_damaging(0.438);SIFT=tolerated(0.2);HGNC=MCPH1	T	C/C,C/C	T	T	T	N/N,N/N	rs75741316	0.99	.	1.68	0.010	0.148	886	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.03;CAnc=T;DP=85;Dels=0.00;FS=0.000;GAnc=T;GRP=1.68;HRun=0;HaplotypeScore=0.0000;MQ=39.29;MQ0=0;Map20=1;OAnc=T;QD=38.40;TS=HPGOMC;TSseq=T,T,T,T,T,C;bSC=886;mSC=0.010;pSC=0.148	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1991,153,0:0,0:18,33:0,0:0,0:0:39.29:0;1/1:34:99:1335,102,0:0,0:12,22:0,0:0,0:0:37.00:0	+
8_8748266_G/A	8	8748266	A	ENSG00000147324	ENST00000276282	Transcript	NON_SYNONYMOUS_CODING	2890	2303	768	P/L	cCg/cTg	-	ENSP=ENSP00000276282;PolyPhen=possibly_damaging(0.833);SIFT=deleterious(0.02);HGNC=MFHAS1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	2.33	.	.	701	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=51;Dels=0.00;FS=0.000;GAnc=G;GRP=2.33;HRun=0;HaplotypeScore=0.0000;MQ=39.50;MQ0=0;Map20=1;OAnc=G;QD=36.24;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=701	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1301,99,0:16,19:0,0:0,0:0,0:0:39.50:0;1/1:16:48.14:618,48,0:7,9:0,0:0,0:0,0:0:37.00:0	-
8_8999019_C/T	8	8999019	T	ENSG00000173281	ENST00000310455	Transcript	NON_SYNONYMOUS_CODING	294	143	48	G/E	gGa/gAa	-	ENSP=ENSP00000308318;PolyPhen=benign(0.005);SIFT=tolerated(0.45);HGNC=PPP1R3B	C	T/T,T/T	C	C	C	N/N,N/N	rs3748140	0.97	.	5.75	.	.	854	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.07;AMR_AF=0.01;AN=4;ASN_AF=0.04;CAnc=C;DP=70;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=5.75;HRun=2;HaplotypeScore=0.0000;MQ=38.19;MQ0=0;Map20=1;OAnc=C;QD=38.51;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=854	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1958,150,0:0,0:0,0:0,0:21,29:0:38.19:0;1/1:20:60.19:767,60,0:0,0:0,0:0,0:10,10:0:37.00:0	-
8_10480498_C/T	8	10480498	T	ENSG00000183638	ENST00000382483	Transcript	NON_SYNONYMOUS_CODING	438	214	72	V/M	Gtg/Atg	-	ENSP=ENSP00000371923;PolyPhen=benign(0.339);SIFT=tolerated(0.44);HGNC=RP1L1	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	-2.92	.	.	917	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=51;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.92;HRun=0;HaplotypeScore=0.9332;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.45;TS=HPGOMC;TSseq=C,N,T,C,C,T;bSC=917	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:96.31:1269,96,0:0,0:0,0:0,0:15,18:0:37.00:0;1/1:18:54.17:704,54,0:0,0:0,0:0,0:13,5:0:36.44:0	-
8_11704650_C/T	8	11704650	T	ENSG00000164733	ENST00000345125	Transcript	NON_SYNONYMOUS_CODING	927	704	235	S/N	aGc/aAc	-	ENSP=ENSP00000342070;PolyPhen=benign(0);SIFT=tolerated(0.79);HGNC=CTSB	C	T/T,T/T	C	C	C	N/N,N/N	rs17573	0.96	.	-9.77	.	.	840	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.18;AN=4;CAnc=C;DP=75;Dels=0.00;FS=0.000;GAnc=C;GRP=-9.77;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.83;TS=HPGOMC;TSseq=C,C,C,C,C,T;bSC=840	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1741,132,0:0,0:0,0:0,0:17,27:0:37.00:0;1/1:31:93.30:1228,93,0:0,0:0,0:0,0:15,16:0:37.00:0	-
8_17510766_C/G	8	17510766	G	ENSG00000129422	ENST00000262102	Transcript	NON_SYNONYMOUS_CODING	3538	3313	1105	E/Q	Gaa/Caa	-	ENSP=ENSP00000262102;PolyPhen=possibly_damaging(0.901);SIFT=tolerated(0.16);HGNC=MTUS1	C	G/G,G/G	C	C	C	N/N,N/N	rs61733705	0.99	.	4.5	1.000	0.829	791	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=C;DP=93;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=4.5;HRun=0;HaplotypeScore=1.9662;MQ=38.55;MQ0=0;Map20=1;OAnc=C;QD=38.62;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=791;mSC=1.000;pSC=0.829	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2543,196,0:0,0:0,0:21,40:0,0:0:38.55:0;1/1:28:84.27:1108,84,0:0,0:0,0:16,12:0,0:0:37.00:0	-
8_18729529_C/G	8	18729529	G	ENSG00000156011	ENST00000327040	Transcript	NON_SYNONYMOUS_CODING	948	845	282	G/A	gGg/gCg	-	ENSP=ENSP00000324127;PolyPhen=benign(0.089);SIFT=tolerated(0.4);HGNC=PSD3	C	G/G,G/G	C	C	C	N/N,N/N	rs78452893	0.94	.	1.83	.	0.961	878	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.11;AMR_AF=0.09;AN=4;CAnc=C;DP=59;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=1.83;HRun=0;HaplotypeScore=0.0000;MQ=38.10;MQ0=0;Map20=1;OAnc=C;QD=35.34;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=878;pSC=0.961	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1305,102,0:0,2:0,0:16,18:0,0:0:38.10:0;1/1:23:69.22:903,69,0:0,0:0,0:13,10:0,0:0:36.56:0	-
8_21929924_A/G	8	21929924	G	ENSG00000158856	ENST00000265800	Transcript	NON_SYNONYMOUS_CODING	964	692	231	K/R	aAg/aGg	-	ENSP=ENSP00000265800;PolyPhen=possibly_damaging(0.59);SIFT=tolerated(0.59);HGNC=EPB49	A	G/G,G/G	A	A	A	N/N,N/N	rs113027572	0.99	RM	5.15	1.000	0.892	725	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=0.549;CAnc=A;DP=74;Dels=0.00;EUR_AF=0.01;FS=3.118;GAnc=A;GRP=5.15;HRun=2;HaplotypeScore=0.9997;MQ=37.73;MQ0=0;MQRankSum=-1.479;Map20=1;OAnc=A;QD=36.84;RM;ReadPosRankSum=-0.380;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=725;mSC=1.000;pSC=0.892	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:83.39:1543,83,0:1,0:0,0:19,21:0,0:0:37.73:0;1/1:33:99:1313,99,0:0,0:0,0:21,12:0,0:0:37.00:0	+
8_22675196_T/C	8	22675196	C	ENSG00000134020	ENST00000256404	Transcript	NON_SYNONYMOUS_CODING	403	311	104	E/G	gAa/gGa	-	ENSP=ENSP00000256404;PolyPhen=benign(0.147);SIFT=tolerated(0.07);HGNC=PEBP4	T	C/C,C/C	T	T	T	N/N,N/N	rs34057411	0.98	.	0.0128	0.000	0.422	912	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.01;AN=4;CAnc=T;DP=59;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=0.0128;HRun;HaplotypeScore=0.0000;MQ=38.68;MQ0=0;Map20=1;OAnc=T;QD=38.44;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=912;mSC=0.000;pSC=0.422	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1379,105,0:0,0:21,14:0,0:0,0:0:38.68:0;1/1:24:72.22:939,72,0:0,0:10,14:0,0:0,0:0:37.00:0	-
8_23294550_T/C	8	23294550	C	ENSG00000197217	ENST00000356206	Transcript	NON_SYNONYMOUS_CODING	1483	1247	416	Q/R	cAg/cGg	-	ENSP=ENSP00000348536;PolyPhen=benign(0.01);SIFT=tolerated(0.12);HGNC=ENTPD4	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	0.193	0.992	0.827	640	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=86;Dels=0.00;FS=0.000;GAnc=T;GRP=0.193;HRun;HaplotypeScore=1.9995;MQ=37.55;MQ0=0;Map20=1;OAnc=T;QD=38.18;TS=HPGOMC;TSseq=T,T,T,T,T,G;bSC=640;mSC=0.992;pSC=0.827	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2095,160,0:0,0:23,30:0,1:0,0:0:37.55:0;1/1:32:96.32:1277,96,0:0,0:19,13:0,0:0,0:0:37.00:0	-
8_24193065_A/G	8	24193065	G	ENSG00000042980	ENST00000265769	Transcript	NON_SYNONYMOUS_CODING	1588	1478	493	N/S	aAt/aGt	-	ENSP=ENSP00000265769;PolyPhen=probably_damaging(0.999);SIFT=deleterious(0);HGNC=ADAM28	A	G/G,G/G	A	A	A	N/N,N/N	rs7001647	0.99	.	5.69	0.999	0.440	763	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AN=4;BaseQRankSum=0.075;CAnc=A;DP=69;Dels=0.00;FS=0.000;GAnc=A;GRP=5.69;HRun=0;HaplotypeScore=0.0000;MQ=38.29;MQ0=0;MQRankSum=-1.657;Map20=1;OAnc=A;QD=37.38;ReadPosRankSum=-1.130;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=763;mSC=0.999;pSC=0.440	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:93.73:1752,94,0:0,1:0,0:19,25:0,0:0:38.29:0;1/1:23:69.22:913,69,0:0,0:0,0:10,13:0,0:0:37.00:0	+
8_24193188_C/T	8	24193188	T	ENSG00000042980	ENST00000437154	Transcript	NON_SYNONYMOUS_CODING	1640	1601	534	A/V	gCg/gTg	-	ENSP=ENSP00000393699;PolyPhen=possibly_damaging(0.718);SIFT=tolerated(0.57);HGNC=ADAM28	C	T/T,T/T	C	C	C	N/N,N/N	rs6982284	0.99	CpG	-5.68	0.000	0.008	764	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AN=4;CAnc=C;CpG;DP=76;Dels=0.00;FS=0.000;GAnc=C;GRP=-5.68;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.26;TS=HPGOMC;TSseq=C,T,C,T,C,C;bSC=764;mSC=0.000;pSC=0.008	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1784,135,0:0,0:0,0:0,0:25,22:0:37.00:0;1/1:29:87.29:1160,87,0:0,0:0,0:0,0:21,8:0:37.00:0	+
8_24199218_C/A	8	24199218	A	ENSG00000042980	ENST00000265769	Transcript	NON_SYNONYMOUS_CODING	1888	1778	593	T/K	aCa/aAa	-	ENSP=ENSP00000265769;PolyPhen=benign(0.014);SIFT=tolerated(0.63);HGNC=ADAM28	C	A/A,A/A	C	C	C	N/N,N/N	rs36041430	0.91	.	-11.7	0.000	0.883	769	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.24;AMR_AF=0.02;AN=4;ASN_AF=0.09;CAnc=C;DP=100;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=-11.7;HRun=2;HaplotypeScore=0.0000;MQ=38.73;MQ0=0;Map20=1;OAnc=C;QD=38.32;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=769;mSC=0.000;pSC=0.883	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2639,202,0:39,29:0,0:0,0:0,0:0:38.73:0;1/1:32:96.31:1248,96,0:19,13:0,0:0,0:0,0:0:37.00:0	+
8_24207399_G/C	8	24207399	C	ENSG00000042980	ENST00000397649	Transcript	NON_SYNONYMOUS_CODING	2160	1258	420	A/P	Gct/Cct	-	ENSP=ENSP00000380770;PolyPhen=benign(0.098);SIFT=deleterious(0.01);HGNC=ADAM28	G	C/C,C/C	G	G	G	N/N,N/N	rs7829944	0.93	.	3.24	1.000	0.066	824	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.12;AMR_AF=0.02;AN=4;ASN_AF=0.10;CAnc=G;DP=58;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=3.24;HRun;HaplotypeScore=0.0000;MQ=38.30;MQ0=0;Map20=1;OAnc=G;QD=38.64;TS=HPGOMC;TSseq=G,G,G,-,G,G;bSC=824;mSC=1.000;pSC=0.066	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1501,114,0:0,0:15,23:0,0:0,0:0:38.30:0;1/1:20:60.16:753,60,0:0,0:12,8:0,0:0,0:0:37.00:0	+
8_24250809_T/C	8	24250809	C	ENSG00000134028	ENST00000256412	Transcript	NON_SYNONYMOUS_CODING	462	242	81	I/T	aTc/aCc	-	ENSP=ENSP00000256412;PolyPhen=benign(0.003);SIFT=tolerated(0.92);HGNC=ADAMDEC1	T	C/C,C/C	T	T	T	N/N,N/N	rs77012108	0.98	.	-10.9	0.000	0.142	682	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.01;AN=4;BaseQRankSum=-0.685;CAnc=T;DP=68;Dels=0.00;FS=0.000;GAnc=T;GRP=-10.9;HRun;HaplotypeScore=0.9997;MQ=39.71;MQ0=0;MQRankSum=0.524;Map20=1;OAnc=T;QD=35.92;ReadPosRankSum=1.168;TS=HPGOMC;TSseq=T,C,T,T,T,T;bSC=682;mSC=0.000;pSC=0.142	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.38:1578,89,0:0,0:22,20:0,0:1,0:0:39.71:0;1/1:25:75.24:987,75,0:0,0:15,10:0,0:0,0:0:37.00:0	+
8_24251659_T/C	8	24251659	C	ENSG00000134028	ENST00000256412	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	582	362	121	M/T	aTg/aCg	-	ENSP=ENSP00000256412;PolyPhen=benign(0.014);SIFT=tolerated(0.33);HGNC=ADAMDEC1	T	C/C,C/C	T	T	T	N/N,N/N	rs7007084	0.98	.	-0.309	0.578	0.430	681	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=T;DP=85;Dels=0.00;FS=0.000;GAnc=T;GRP=-0.309;HRun=0;HaplotypeScore=0.9997;MQ=38.19;MQ0=0;Map20=1;OAnc=T;QD=37.98;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=681;mSC=0.578;pSC=0.430	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1932,147,0:0,0:24,25:0,0:1,0:0:38.19:0;1/1:35:65.32:1271,65,0:0,0:20,14:0,0:0,1:0:37.00:0	+
8_27657082_A/G	8	27657082	G	ENSG00000171320	ENST00000305188	Transcript	NON_SYNONYMOUS_CODING	1760	1522	508	I/V	Att/Gtt	-	ENSP=ENSP00000306999;PolyPhen=benign(0.001);SIFT=tolerated(0.29);HGNC=ESCO2	A	G/G,G/G	A	A	A	N/N,N/N	rs114956994	0.98	.	-5.23	0.038	0.053	509	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.01;AN=4;ASN_AF=0.04;CAnc=A;DP=88;Dels=0.00;FS=0.000;GAnc=A;GRP=-5.23;HRun=0;HaplotypeScore=0.0000;MQ=37.58;MQ0=0;Map20=1;OAnc=A;QD=38.07;TS=HPGOMC;TSseq=A,A,A,A,G,A;bSC=509;mSC=0.038;pSC=0.053	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2013,153,0:0,1:0,0:25,26:0,0:0:37.58:0;1/1:36:99:1400,108,0:0,0:0,0:19,17:0,0:0:37.00:0	+
8_30704174_G/A	8	30704174	A	ENSG00000133863	ENST00000256246	Transcript	NON_SYNONYMOUS_CODING	2435	2360	787	P/L	cCg/cTg	-	ENSP=ENSP00000256246;PolyPhen=possibly_damaging(0.573);SIFT=tolerated(0.06);HGNC=TEX15	G	A/A,A/A	G	G	G	N/N,N/N	.	1.0	CpG	-1.71	0.000	0.753	350	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=83;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.71;HRun=0;HaplotypeScore=0.0000;MQ=37.45;MQ0=0;Map20=1;OAnc=G;QD=36.67;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=350;mSC=0.000;pSC=0.753	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1646,129,0:19,24:0,0:0,0:0,0:0:37.45:0;1/1:39:99:1525,117,0:18,21:0,0:0,0:0,0:0:37.00:0	-
8_39525584_A/G	8	39525584	G	ENSG00000168619	ENST00000265707	Transcript	NON_SYNONYMOUS_CODING	1439	1394	465	N/S	aAt/aGt	-	ENSP=ENSP00000265707;PolyPhen=possibly_damaging(0.772);SIFT=tolerated(0.05);HGNC=ADAM18	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	5.36	1.000	0.913	758	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=92;Dels=0.00;FS=0.000;GAnc=A;GRP=5.36;HRun=0;HaplotypeScore=0.9997;MQ=39.06;MQ0=0;Map20=1;OAnc=A;QD=37.99;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=758;mSC=1.000;pSC=0.913	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2199,169,0:0,0:0,0:20,37:0,0:0:39.06:0;1/1:35:99:1312,102,0:0,0:0,0:14,21:0,0:0:37.00:0	+
8_41791515_T/G	8	41791515	G	ENSG00000083168	ENST00000265713	Transcript	NON_SYNONYMOUS_CODING	4635	4223	1408	E/A	gAa/gCa	-	ENSP=ENSP00000265713;PolyPhen=possibly_damaging(0.785);HGNC=KAT6A	T	G/G,G/G	T	T	T	N/N,N/N	.	1	.	4.79	0.010	0.812	305	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=77;Dels=0.00;FS=0.000;GAnc=T;GRP=4.79;HRun=0;HaplotypeScore=0.0000;MQ=37.62;MQ0=0;Map20=1;OAnc=T;QD=38.83;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=305;mSC=0.010;pSC=0.812	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1897,144,0:0,0:0,0:17,31:0,0:0:37.62:0;1/1:29:87.28:1150,87,0:0,0:0,0:17,12:0,0:0:37.00:0	-
8_42232344_C/T	8	42232344	T	ENSG00000104371	ENST00000220812	Transcript	NON_SYNONYMOUS_CODING	537	350	117	G/E	gGg/gAg	-	ENSP=ENSP00000220812;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=DKK4	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	1.36	0.002	0.419	413	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.184;CAnc=C;DP=69;Dels=0.00;FS=3.933;GAnc=C;GRP=1.36;HRun=0;HaplotypeScore=0.0000;MQ=37.62;MQ0=0;MQRankSum=1.511;Map20=1;OAnc=C;QD=36.49;ReadPosRankSum=-1.585;TS=HPGOMC;TSseq=C,C,C,T,C,C;bSC=413;mSC=0.002;pSC=0.419	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1785,101,0:0,0:1,0:0,0:19,27:0:37.62:0;1/1:21:63.21:840,63,0:0,0:0,0:0,0:13,8:0:37.00:0	-
8_82441767_G/T	8	82441767	T	ENSG00000197416	ENST00000360464	Transcript	NON_SYNONYMOUS_CODING	215	152	51	T/K	aCa/aAa	-	ENSP=ENSP00000353650;PolyPhen=probably_damaging(0.952);SIFT=tolerated(0.08);HGNC=FABP12	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	3.84	0.219	0.972	849	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=90;Dels=0.00;FS=0.000;GAnc=G;GRP=3.84;HRun=2;HaplotypeScore=0.0000;MQ=38.43;MQ0=0;Map20=1;OAnc=G;QD=37.29;TS=HPGO;TSseq=G,G,G,G;bSC=849;mSC=0.219;pSC=0.972	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2345,181,0:0,0:0,0:0,0:26,36:0:38.43:0;1/1:28:84.27:1088,84,0:0,0:0,0:0,0:17,11:0:37.00:0	-
8_87581566_A/G	8	87581566	G	ENSG00000170289	ENST00000517327	Transcript	NON_SYNONYMOUS_CODING	326	326	109	L/P	cTg/cCg	-	ENSP=ENSP00000428329;PolyPhen=unknown(0);HGNC=CNGB3	A	G/G,G/G	A	A	A	N/N,N/N	rs73269535	0.96	RM	-0.967	0.012	0.177	660	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.01;AN=4;CAnc=A;DP=68;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=-0.967;HRun=2;HaplotypeScore=0.0000;MQ=39.14;MQ0=0;Map20=1;OAnc=A;QD=37.62;RM;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=660;mSC=0.012;pSC=0.177	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1576,123,0:0,0:0,0:21,19:0,0:0:39.14:0;1/1:27:81.26:1061,81,0:0,0:0,0:16,11:0,0:0:37.00:0	-
8_88365925_T/A	8	88365925	A	ENSG00000176571	ENST00000518476	Transcript	NON_SYNONYMOUS_CODING	1265	1214	405	I/N	aTt/aAt	-	ENSP=ENSP00000430073;PolyPhen=probably_damaging(0.995);SIFT=deleterious(0);HGNC=CNBD1	T	A/A,A/A	T	T	T	N/N,N/N	rs186699266	1.0	.	4.98	0.909	0.894	874	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=T;DP=80;Dels=0.00;FS=0.000;GAnc=T;GRP=4.98;HRun;HaplotypeScore=1.9891;MQ=39.34;MQ0=0;Map20=1;OAnc=T;QD=36.44;TS=HPGOMC;TSseq=T,T,T,T,N,T;bSC=874;mSC=0.909;pSC=0.894	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1855,141,0:24,25:0,0:0,1:0,0:0:39.34:0;1/1:30:90.29:1181,90,0:16,14:0,0:0,0:0,0:0:37.00:0	+
8_97892231_C/G	8	97892231	G	ENSG00000104324	ENST00000220763	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	1057	847	283	Q/E	Cag/Gag	-	ENSP=ENSP00000220763;PolyPhen=benign(0.005);SIFT=tolerated(0.72);HGNC=CPQ	C	G/G,G/G	C	C	C	N/N,N/N	rs149951331	1.0	.	3.84	0.976	0.905	780	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;BaseQRankSum=-0.699;CAnc=C;DP=90;Dels=0.00;FS=0.000;GAnc=C;GRP=3.84;HRun=0;HaplotypeScore=2.8661;MQ=38.04;MQ0=0;MQRankSum=-0.456;Map20=1;OAnc=C;QD=37.80;ReadPosRankSum=0.334;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=780;mSC=0.976;pSC=0.905	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2188,132,0:0,0:1,0:39,17:0,0:0:38.04:0;1/1:33:99:1303,99,0:0,0:0,0:14,19:0,0:0:37.00:0	+
8_125989649_G/A	8	125989649	A	ENSG00000180938	ENST00000319286	Transcript	NON_SYNONYMOUS_CODING	1293	1139	380	G/E	gGa/gAa	-	ENSP=ENSP00000319305;PolyPhen=possibly_damaging(0.829);SIFT=deleterious(0);HGNC=ZNF572	G	A/A,A/A	G	G	G	N/N,N/N	rs10105106	0.94	.	4.22	0.961	0.400	669	0	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.21;AMR_AF=0.05;AN=4;CAnc=G;DP=102;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=4.22;HRun;HaplotypeScore=0.9997;MQ=37.95;MQ0=0;Map20=0;OAnc=G;QD=38.57;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=669;mSC=0.961;pSC=0.400	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2463,187,0:34,29:0,0:0,0:0,0:0:37.95:0;1/1:39:87.75:1472,88,0:19,19:0,0:1,0:0,0:0:36.74:0	+
8_133740053_C/A	8	133740053	A	ENSG00000165071	ENST00000356838	Transcript	NON_SYNONYMOUS_CODING	753	610	204	D/Y	Gat/Tat	-	ENSP=ENSP00000349296;PolyPhen=probably_damaging(0.986);SIFT=tolerated(0.09);HGNC=TMEM71	C	A/A,A/A	C	C	C	N/N,N/N	rs34962342	1.0	.	0.357	0.066	0.509	537	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-0.333;CAnc=C;DP=90;Dels=0.00;FS=4.607;GAnc=C;GRP=0.357;HRun=0;HaplotypeScore=0.9665;MQ=37.58;MQ0=0;MQRankSum=0.933;Map20=1;OAnc=C;QD=37.45;ReadPosRankSum=0.267;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=537;mSC=0.066;pSC=0.509	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1980,117,0:34,17:0,1:0,0:0,0:0:37.58:0;1/1:38:99:1495,114,0:21,17:0,0:0,0:0,0:0:37.00:0	-
8_133854926_A/G	8	133854926	G	ENSG00000129292	ENST00000220847	Transcript	NON_SYNONYMOUS_CODING	2530	715	239	M/V	Atg/Gtg	-	ENSP=ENSP00000220847;PolyPhen=benign(0.006);SIFT=tolerated(1);HGNC=PHF20L1	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-4.53	0.001	0.919	288	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=86;Dels=0.00;FS=0.000;GAnc=A;GRP=-4.53;HRun=0;HaplotypeScore=0.9469;MQ=38.70;MQ0=0;Map20=1;OAnc=A;QD=38.13;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=288;mSC=0.001;pSC=0.919	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2016,156,0:0,0:0,0:37,14:0,0:0:38.70:0;1/1:34:99:1348,102,0:0,0:0,0:18,16:0,0:0:37.00:0	+
8_133900495_G/A	8	133900495	A	ENSG00000042832	ENST00000220616	Transcript	NON_SYNONYMOUS_CODING	2483	2443	815	G/R	Gga/Aga	-	ENSP=ENSP00000220616;PolyPhen=benign(0.002);SIFT=tolerated(0.89);HGNC=TG	G	A/A,A/A	G	G	G	N/N,N/N	rs16904774	0.95	CpG	-1.19	0.000	0.342	288	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.10;AMR_AF=0.01;AN=4;ASN_AF=0.08;BaseQRankSum=-0.301;CAnc=G;CpG;DP=73;Dels=0.00;EUR_AF=0.02;FS=3.522;GAnc=G;GRP=-1.19;HRun=0;HaplotypeScore=1.9995;MQ=38.26;MQ0=0;MQRankSum=-0.603;Map20=1;OAnc=G;QD=35.41;ReadPosRankSum=-1.281;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=288;mSC=0.000;pSC=0.342	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:95.43:1697,95,0:25,21:0,0:0,1:0,0:0:38.26:0;1/1:26:78.25:1025,78,0:17,9:0,0:0,0:0,0:0:37.00:0	+
8_134024152_T/C	8	134024152	C	ENSG00000042832	ENST00000220616	Transcript	NON_SYNONYMOUS_CODING	6309	6269	2090	L/P	cTg/cCg	-	ENSP=ENSP00000220616;PolyPhen=possibly_damaging(0.89);SIFT=deleterious(0);HGNC=TG	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	3.16	0.997	0.021	798	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=61;Dels=0.00;FS=0.000;GAnc=T;GRP=3.16;HRun;HaplotypeScore=0.0000;MQ=39.31;MQ0=0;Map20=1;OAnc=T;QD=38.61;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=798;mSC=0.997;pSC=0.021	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1500,114,0:0,0:22,15:0,0:0,0:0:39.31:0;1/1:23:69.22:893,69,0:0,0:12,11:0,0:0,0:0:37.00:0	+
8_142228550_C/T	8	142228550	T	ENSG00000022567	ENST00000024061	Transcript	NON_SYNONYMOUS_CODING	1344	1036	346	G/S	Ggc/Agc	-	ENSP=ENSP00000024061;PolyPhen=benign(0.013);SIFT=tolerated(0.14);HGNC=SLC45A4	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	2.7	0.000	0.052	783	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=2.7;HRun=0;HaplotypeScore=2.9911;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.54;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=783;mSC=0.000;pSC=0.052	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1921,147,0:0,0:0,0:0,0:28,19:0:37.00:0;1/1:14:42.14:548,42,0:0,0:0,0:0,0:7,7:0:37.00:0	-
8_144990587_C/T	8	144990587	T	ENSG00000178209	ENST00000322810	Transcript	NON_SYNONYMOUS_CODING	13983	13813	4605	A/T	Gcg/Acg	-	ENSP=ENSP00000323856;PolyPhen=unknown(0);HGNC=PLEC	C	T/T,T/T	C	C	-	N/N,N/N	rs187321200	1.0	CpG	3.11	0.005	0.872	550	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-0.815;CAnc=C;CpG;DP=56;Dels=0.00;FS=0.000;GAnc=C;GRP=3.11;HRun=0;HaplotypeScore=0.9997;MQ=37.83;MQ0=0;MQRankSum=-1.529;Map20=1;QD=34.78;ReadPosRankSum=-0.102;TS=HPG;TSseq=C,C,C;bSC=550;mSC=0.005;pSC=0.872	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:62.33:1285,62,0:0,0:0,1:0,0:14,21:0:37.83:0;1/1:20:60.20:800,60,0:0,0:0,0:0,0:12,8:0:37.00:0	-
8_145512853_C/T	8	145512853	T	ENSG00000170727	ENST00000307404	Transcript	NON_SYNONYMOUS_CODING	262	232	78	D/N	Gac/Aac	-	ENSP=ENSP00000304151;PolyPhen=possibly_damaging(0.641);SIFT=tolerated(0.65);HGNC=BOP1	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	-2.73	0.000	.	804	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=84;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.73;HRun;HaplotypeScore=1.9971;MQ=36.59;MQ0=0;Map20=1;OAnc=C;QD=38.48;TS=HPGOMC;TSseq=C,C,C,C,T,C;bSC=804;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1918,147,0:0,0:0,0:0,0:21,27:0:36.59:0;1/1:35:99:1347,105,0:0,0:0,0:0,0:9,26:0:37.00:0	-
8_145626861_T/G	8	145626861	G	ENSG00000071894	ENST00000349769	Transcript	NON_SYNONYMOUS_CODING	364	269	90	K/T	aAg/aCg	-	ENSP=ENSP00000339353;PolyPhen=benign(0.006);SIFT=tolerated(0.56);HGNC=CPSF1	T	G/G,G/G	T	T	-	N/N,N/N	.	1	.	4.09	.	0.881	450	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=49;Dels=0.00;FS=0.000;GAnc=T;GRP=4.09;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;QD=38.32;TS=HPGC;TSseq=T,T,T,T;bSC=450;pSC=0.881	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1451,111,0:0,0:0,0:17,19:0,0:0:37.00:0;1/1:12:36.11:470,36,0:0,0:0,0:7,5:0,0:0:37.00:0	-
9_2718415_G/C	9	2718415	C	ENSG00000168263	ENST00000382082	Transcript	NON_SYNONYMOUS_CODING	914	676	226	V/L	Gtc/Ctc	-	ENSP=ENSP00000371514;PolyPhen=benign(0);SIFT=tolerated(0.71);HGNC=KCNV2	G	C/C,C/C	G	G	G	N/N,N/N	.	0.99	.	2.94	0.000	0.086	900	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=G;DP=50;Dels=0.00;FS=0.000;GAnc=G;GRP=2.94;HRun=0;HaplotypeScore=0.9997;MQ=38.68;MQ0=0;Map20=1;OAnc=G;QD=38.30;TS=HPGOMC;TSseq=G,G,G,G,G,T;bSC=900;mSC=0.000;pSC=0.086	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1374,105,0:0,0:15,20:0,0:0,0:0:38.68:0;1/1:15:45.14:589,45,0:0,0:11,4:0,0:0,0:0:37.00:0	+
9_21481483_G/A	9	21481483	A	ENSG00000184995	ENST00000448696	Transcript	STOP_GAINED	830	211	71	Q/*	Cag/Tag	-	ENSP=ENSP00000418018;HGNC=IFNE	G	A/A,A/A	G	G	G	N/N,N/N	rs2039381	0.94	.	3.84	0.002	0.697	829	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.08;AMR_AF=0.05;AN=4;ASN_AF=0.15;BaseQRankSum=1.641;CAnc=G;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=3.84;HRun=0;HaplotypeScore=0.0000;MQ=39.90;MQ0=0;MQRankSum=-0.547;Map20=1;OAnc=G;QD=35.46;ReadPosRankSum=-0.365;TS=HPGOM;TSseq=G,G,G,G,G;bSC=829;mSC=0.002;pSC=0.697	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1452,111,0:20,19:0,0:0,1:0,0:0:39.90:0;1/1:35:99:1391,105,0:19,16:0,0:0,0:0,0:0:37.00:0	-
9_27524615_C/T	9	27524615	T	ENSG00000147896	ENST00000276943	Transcript	NON_SYNONYMOUS_CODING	304	281	94	A/V	gCc/gTc	-	ENSP=ENSP00000276943;PolyPhen=benign(0.014);SIFT=tolerated(0.65);HGNC=IFNK	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	2.7	0.013	0.177	752	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.088;CAnc=C;DP=73;Dels=0.00;FS=3.112;GAnc=C;GRP=2.7;HRun=0;HaplotypeScore=1.9995;MQ=38.38;MQ0=0;MQRankSum=0.443;Map20=1;OAnc=C;QD=37.00;ReadPosRankSum=1.088;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=752;mSC=0.013;pSC=0.177	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.41:1624,89,0:0,0:1,0:0,0:20,22:0:38.38:0;1/1:30:90.29:1182,90,0:0,0:0,0:0,0:18,12:0:37.00:0	+
9_34459025_G/T	9	34459025	T	ENSG00000122735	ENST00000242317	Transcript	NON_SYNONYMOUS_CODING	193	22	8	A/S	Gct/Tct	-	ENSP=ENSP00000242317;PolyPhen=benign(0.002);SIFT=tolerated(0.38);HGNC=DNAI1	G	T/T,T/T	G	G	G	N/N,N/N	rs11547035	0.96	.	2.59	0.000	0.079	282	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=G;DP=64;Dels=0.01;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=2.59;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.70;TS=HPGOMC;TSseq=G,G,G,G,G,A;bSC=282;mSC=0.000;pSC=0.079	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1277,99,0:0,0:0,0:0,0:17,16:0:37.00:0;1/1:30:90.29:1182,90,0:0,0:0,0:0,0:13,17:0:37.00:0	+
9_35108136_C/T	9	35108136	T	ENSG00000005238	ENST00000322813	Transcript	NON_SYNONYMOUS_CODING	447	136	46	G/R	Ggg/Agg	-	ENSP=ENSP00000319897;PolyPhen=benign(0.001);SIFT=tolerated(0.06);HGNC=FAM214B	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	3.83	1.000	0.934	167	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-0.520;CAnc=C;CpG;DP=56;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=3.83;HRun=0;HaplotypeScore=3.9196;MQ=39.05;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=C;QD=32.58;ReadPosRankSum=-0.347;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=167;mSC=1.000;pSC=0.934	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:72.64:1434,73,0:0,0:0,1:0,0:21,21:0:39.05:0;1/1:13:39.12:509,39,0:0,0:0,0:0,0:8,5:0:37.00:0	-
9_35612978_G/A	9	35612978	A	ENSG00000137101	ENST00000259633	Transcript	NON_SYNONYMOUS_CODING	825	701	234	P/L	cCg/cTg	-	ENSP=ENSP00000259633;PolyPhen=benign(0.163);SIFT=tolerated(0.21);HGNC=CD72	G	A/A,A/A	G	G	G	N/N,N/N	rs34791102	0.95	CpG	3.81	0.368	0.069	245	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.11;AMR_AF=0.01;AN=4;ASN_AF=0.01;BaseQRankSum=-1.122;CAnc=G;CpG;DP=91;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=3.81;HRun=0;HaplotypeScore=2.9947;MQ=39.13;MQ0=0;MQRankSum=-0.939;Map20=1;OAnc=G;QD=34.52;ReadPosRankSum=-1.763;TS=HPGOMC;TSseq=G,A,A,G,G,G;bSC=245;mSC=0.368;pSC=0.069	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:79.50:1932,80,0:28,25:0,0:1,1:0,0:0:39.13:0;1/1:36:99:1415,108,0:18,18:0,0:0,0:0,0:0:37.00:0	-
9_35677793_C/T	9	35677793	T	ENSG00000107159	ENST00000378357	Transcript	NON_SYNONYMOUS_CODING	951	847	283	P/S	Ccg/Tcg	-	ENSP=ENSP00000367608;PolyPhen=probably_damaging(0.944);SIFT=tolerated(0.06);HGNC=CA9	C	T/T,T/T	C	-	C	N/N,N/N	rs76894152	1.0	.	5.25	0.988	0.854	252	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;DP=80;Dels=0.00;FS=0.000;GRP=5.25;HRun=0;HaplotypeScore=5.9356;MQ=39.39;MQ0=0;Map20=1;OAnc=C;QD=36.80;TS=HPOMC;TSseq=C,C,C,C,C;bSC=252;mSC=0.988;pSC=0.854	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2131,166,0:0,0:0,0:0,0:34,21:0:39.39:0;1/1:23:66.21:868,66,0:0,0:0,0:0,0:16,7:0:37.00:0	+
9_37784876_T/G	9	37784876	G	ENSG00000107371	ENST00000327304	Transcript	NON_SYNONYMOUS_CODING	179	166	56	N/H	Aat/Cat	-	ENSP=ENSP00000323046;PolyPhen=possibly_damaging(0.541);SIFT=tolerated(0.17);HGNC=EXOSC3	T	G/G,G/G	T	T	T	N/N,N/N	.	1	.	3.51	0.210	0.392	568	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=54;Dels=0.00;FS=0.000;GAnc=T;GRP=3.51;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=39.11;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=568;mSC=0.210;pSC=0.392	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1480,111,0:0,0:0,0:18,19:0,0:0:37.00:0;1/1:17:51.16:660,51,0:0,0:0,0:10,7:0,0:0:37.00:0	-
9_37784989_C/G	9	37784989	G	ENSG00000107371	ENST00000327304	Transcript	NON_SYNONYMOUS_CODING	66	53	18	R/P	cGc/cCc	-	ENSP=ENSP00000323046;PolyPhen=probably_damaging(0.945);SIFT=deleterious(0.01);HGNC=EXOSC3	C	G/G,G/G	C	C	C	N/N,N/N	.	1	CpG	5.27	0.798	0.137	568	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=41;Dels=0.00;FS=0.000;GAnc=C;GRP=5.27;HRun;HaplotypeScore=0.9665;MQ=38.10;MQ0=0;Map20=1;OAnc=C;QD=37.25;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=568;mSC=0.798;pSC=0.137	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:27:78.26:1039,78,0:0,1:0,0:9,17:0,0:0:38.10:0;1/1:14:42.14:560,42,0:0,0:0,0:6,8:0,0:0:37.00:0	-
9_37784990_G/A	9	37784990	A	ENSG00000107371	ENST00000327304	Transcript	NON_SYNONYMOUS_CODING	65	52	18	R/C	Cgc/Tgc	-	ENSP=ENSP00000323046;PolyPhen=probably_damaging(0.952);SIFT=deleterious(0);HGNC=EXOSC3	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	5.27	0.789	0.137	568	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=39;Dels=0.00;FS=0.000;GAnc=G;GRP=5.27;HRun=0;HaplotypeScore=0.9665;MQ=38.14;MQ0=0;Map20=1;OAnc=G;QD=37.02;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=568;mSC=0.789;pSC=0.137	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:26:75.25:995,75,0:9,17:0,0:0,0:0,0:0:38.14:0;1/1:13:39.13:520,39,0:5,8:0,0:0,0:0,0:0:37.00:0	-
9_71998936_C/T	9	71998936	T	ENSG00000135063	ENST00000257515	Transcript	NON_SYNONYMOUS_CODING	1118	698	233	T/I	aCt/aTt	-	ENSP=ENSP00000257515;PolyPhen=benign(0.001);SIFT=tolerated(0.13);HGNC=FAM189A2	C	T/T,T/T	C	C	C	N/N,N/N	rs35386391	0.99	.	2.77	0.619	0.633	733	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=C;DP=80;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=2.77;HRun;HaplotypeScore=1.9944;MQ=38.99;MQ0=0;Map20=1;OAnc=C;QD=37.72;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=733;mSC=0.619;pSC=0.633	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1617,123,0:0,0:0,0:0,0:27,15:0:38.99:0;1/1:38:99:1511,114,0:0,0:0,0:0,0:20,18:0:37.00:0	+
9_72459437_C/T	9	72459437	T	ENSG00000204711	ENST00000377197	Transcript	NON_SYNONYMOUS_CODING	244	157	53	R/C	Cgt/Tgt	-	ENSP=ENSP00000366402;PolyPhen=possibly_damaging(0.73);SIFT=tolerated(0.09);HGNC=C9orf135	C	T/T,T/T	C	C	C	N/N,N/N	rs55859531	0.98	CpG	-0.0725	0.013	0.710	788	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AN=4;CAnc=C;CpG;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.0725;HRun=0;HaplotypeScore=0.0000;MQ=40.68;MQ0=0;Map20=1;OAnc=C;QD=36.17;TS=HPGOM;TSseq=C,C,C,C,C;bSC=788;mSC=0.013;pSC=0.710	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1444,111,0:0,0:0,0:0,0:14,24:0:40.68:0;1/1:31:93.30:1217,93,0:0,0:0,0:0,0:14,17:0:37.00:0	+
9_74687591_C/T	9	74687591	T	ENSG00000204669	ENST00000424431	Transcript	NON_SYNONYMOUS_CODING	143	47	16	R/Q	cGg/cAg	-	ENSP=ENSP00000412956;PolyPhen=benign(0);HGNC=C9orf57	C	T/T,T/T	C	C	-	N/N,N/N	rs111947240	0.95	CpG,RM	0	0.300	0.115	860	0.5	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.09;AMR_AF=0.06;AN=4;BaseQRankSum=1.578;CAnc=C;CpG;DP=73;Dels=0.00;EUR_AF=0.05;FS=3.108;GAnc=C;GRP=0;HRun=0;HaplotypeScore=0.9933;MQ=37.17;MQ0=2;MQRankSum=-1.039;Map20=0.5;OAnc=-;QD=35.28;RM;ReadPosRankSum=-0.808;TS=HPGOMC;TSseq=C,C,T,-,-,-;bSC=860;mSC=0.300;pSC=0.115	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1656,104,0:0,0:0,1:0,0:24,21:0:37.17:1;1/1:27:78.24:1009,78,0:0,0:0,0:0,0:15,12:0:35.88:1	-
9_97365815_T/A	9	97365815	A	ENSG00000165140	ENST00000375326	Transcript	NON_SYNONYMOUS_CODING	1062	865	289	M/L	Atg/Ttg	-	ENSP=ENSP00000364475;PolyPhen=benign(0.003);SIFT=tolerated(0.15);HGNC=FBP1	T	A/A,A/A	T	T	T	N/N,N/N	rs145771944	1.0	.	4.09	0.998	0.876	707	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=T;DP=77;Dels=0.00;FS=0.000;GAnc=T;GRP=4.09;HRun;HaplotypeScore=0.0000;MQ=37.64;MQ0=0;Map20=1;OAnc=T;QD=37.07;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=707;mSC=0.998;pSC=0.876	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1775,135,0:31,16:0,0:0,0:0,0:0:37.64:0;1/1:30:90.29:1176,90,0:12,18:0,0:0,0:0,0:0:37.00:0	-
9_101778272_A/C	9	101778272	C	ENSG00000204291	ENST00000375001	Transcript	NON_SYNONYMOUS_CODING	1941	1518	506	E/D	gaA/gaC	-	ENSP=ENSP00000364140;PolyPhen=benign(0.015);HGNC=COL15A1	A	C/C,C/C	A	A	A	N/N,N/N	rs35250850	0.94	.	-1.03	0.001	0.431	804	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.09;AMR_AF=0.04;AN=4;CAnc=A;DP=71;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=A;GRP=-1.03;HRun=0;HaplotypeScore=1.9995;MQ=38.19;MQ0=0;Map20=1;OAnc=A;QD=37.36;TS=HPGOMC;TSseq=A,A,A,A,G,A;bSC=804;mSC=0.001;pSC=0.431	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1901,147,0:0,0:16,33:0,0:1,0:0:38.19:0;1/1:21:60.18:769,60,0:0,0:13,8:0,0:0,0:0:37.00:0	+
9_101787280_C/A	9	101787280	A	ENSG00000204291	ENST00000375001	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2402	1979	660	P/Q	cCg/cAg	-	ENSP=ENSP00000364140;PolyPhen=benign(0.076);HGNC=COL15A1	C	A/A,A/A	C	C	C	N/N,N/N	rs138655830	1.0	CpG	1.59	0.959	0.611	763	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.016;CAnc=C;CpG;DP=46;Dels=0.00;FS=3.163;GAnc=C;GRP=1.59;HRun=0;HaplotypeScore=0.9947;MQ=38.96;MQ0=0;MQRankSum=-1.255;Map20=1;OAnc=C;QD=34.33;ReadPosRankSum=1.016;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=763;mSC=0.959;pSC=0.611	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:47.28:1063,47,0:15,14:0,1:0,0:0,0:0:38.96:0;1/1:16:48.16:640,48,0:7,9:0,0:0,0:0,0:0:37.00:0	+
9_101825372_C/T	9	101825372	T	ENSG00000204291	ENST00000375001	Transcript	NON_SYNONYMOUS_CODING	4055	3632	1211	A/V	gCc/gTc	-	ENSP=ENSP00000364140;PolyPhen=benign(0.003);HGNC=COL15A1	C	T/T,T/T	C	C	C	N/N,N/N	rs185270581	1.0	.	1.34	0.176	0.186	662	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-1.516;CAnc=C;DP=88;Dels=0.00;FS=0.000;GAnc=C;GRP=1.34;HRun=0;HaplotypeScore=1.9944;MQ=37.61;MQ0=0;MQRankSum=1.444;Map20=1;OAnc=C;QD=35.99;ReadPosRankSum=-0.217;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=662;mSC=0.176;pSC=0.186	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1796,104,0:0,0:0,1:0,0:18,29:0:37.61:0;1/1:39:99:1499,117,0:0,0:0,0:0,0:24,15:0:36.74:0	+
9_116187302_C/G	9	116187302	G	ENSG00000157653	ENST00000288462	Transcript	NON_SYNONYMOUS_CODING	1257	811	271	P/A	Cca/Gca	-	ENSP=ENSP00000288462;PolyPhen=probably_damaging(0.926);SIFT=deleterious(0.05);HGNC=C9orf43	C	G/G,G/G	C	C	C	N/N,N/N	rs111748634	0.97	.	4.11	0.823	0.580	546	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=C;DP=86;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=4.11;HRun=0;HaplotypeScore=3.9285;MQ=38.19;MQ0=0;Map20=1;OAnc=C;QD=37.79;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=546;mSC=0.823;pSC=0.580	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1923,147,0:0,0:0,0:22,27:0,0:0:38.19:0;1/1:36:99:1421,108,0:0,0:0,0:20,16:0,0:0:37.00:0	+
9_116929987_G/A	9	116929987	A	ENSG00000196739	ENST00000356083	Transcript	NON_SYNONYMOUS_CODING	543	152	51	R/Q	cGg/cAg	-	ENSP=ENSP00000348385;PolyPhen=unknown(0);SIFT=tolerated(0.3);HGNC=COL27A1	G	A/A,A/A	G	G	G	N/N,N/N	rs141549766	1.0	CpG	-0.594	0.934	0.959	848	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.594;HRun=0;HaplotypeScore=0.5784;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.94;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=848;mSC=0.934;pSC=0.959	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.31:1240,93,0:18,12:0,0:0,0:0,0:0:37.00:0;1/1:23:66.19:841,66,0:10,13:0,0:0,0:0,0:0:37.00:0	+
9_125289167_G/A	9	125289167	A	ENSG00000171505	ENST00000304880	Transcript	NON_SYNONYMOUS_CODING	406	406	136	P/S	Ccc/Tcc	-	ENSP=ENSP00000306974;PolyPhen=benign(0.143);SIFT=tolerated(0.08);HGNC=OR1N1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	2.82	0.000	0.881	809	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=79;Dels=0.00;FS=0.000;GAnc=G;GRP=2.82;HRun=0;HaplotypeScore=0.9993;MQ=38.19;MQ0=0;Map20=1;OAnc=G;QD=36.25;TS=HPGOC;TSseq=G,G,G,G,G;bSC=809;mSC=0.000;pSC=0.881	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1845,141,0:28,22:0,0:0,0:0,0:0:38.19:0;1/1:29:87.27:1140,87,0:13,16:0,0:0,0:0,0:0:37.00:0	-
9_125424053_G/A	9	125424053	A	ENSG00000173679	ENST00000309623	Transcript	NON_SYNONYMOUS_CODING	59	59	20	R/Q	cGa/cAa	-	ENSP=ENSP00000310773;PolyPhen=benign(0.014);SIFT=tolerated(1);HGNC=OR1L1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	1.02	0.000	0.146	830	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.471;CAnc=G;CpG;DP=81;Dels=0.00;FS=0.000;GAnc=G;GRP=1.02;HRun;HaplotypeScore=2.5602;MQ=38.64;MQ0=0;MQRankSum=1.667;Map20=1;OAnc=G;QD=36.59;ReadPosRankSum=0.360;TS=HPGOMC;TSseq=G,G,G,G,G,A;bSC=830;mSC=0.000;pSC=0.146	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2009,125,0:20,33:0,0:0,1:0,0:0:38.64:0;1/1:27:81.27:1076,81,0:18,9:0,0:0,0:0,0:0:37.00:0	+
9_125424224_T/G	9	125424224	G	ENSG00000173679	ENST00000309623	Transcript	NON_SYNONYMOUS_CODING	230	230	77	I/S	aTt/aGt	-	ENSP=ENSP00000310773;PolyPhen=possibly_damaging(0.528);SIFT=deleterious(0.03);HGNC=OR1L1	T	G/G,G/G	T	T	T	N/N,N/N	.	1	.	0.685	0.000	0.118	830	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=85;Dels=0.00;FS=0.000;GAnc=T;GRP=0.685;HRun=0;HaplotypeScore=0.0000;MQ=37.56;MQ0=0;Map20=1;OAnc=T;QD=38.29;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=830;mSC=0.000;pSC=0.118	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2062,159,0:0,0:0,0:21,31:0,0:0:37.56:0;1/1:32:96.27:1230,96,0:0,0:0,0:14,18:0,0:0:37.00:0	+
9_126136934_G/A	9	126136934	A	ENSG00000148204	ENST00000373629	Transcript	NON_SYNONYMOUS_CODING	2470	2470	824	A/T	Gct/Act	-	ENSP=ENSP00000362732;PolyPhen=benign(0.268);SIFT=deleterious(0.02);HGNC=CRB2	G	A/A,A/A	G	G	G	N/N,N/N	.	1.0	CpG	5.02	0.002	.	742	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=G;GRP=5.02;HRun=0;HaplotypeScore=0.9997;MQ=37.73;MQ0=0;Map20=1;OAnc=G;QD=36.73;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=742;mSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1539,117,0:21,20:0,0:0,0:0,0:0:37.73:0;1/1:22:66.21:860,66,0:13,9:0,0:0,0:0,0:0:37.00:0	+
9_127217402_G/T	9	127217402	T	ENSG00000180264	ENST00000334810	Transcript	NON_SYNONYMOUS_CODING	1445	1445	482	R/L	cGt/cTt	-	ENSP=ENSP00000335156;PolyPhen=benign(0.009);SIFT=tolerated(0.17);HGNC=GPR144	G	T/T,T/T	G	G	G	N/N,N/N	.	1	CpG	-2.7	0.000	0.244	814	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=G;GRP=-2.7;HRun;HaplotypeScore=0.0000;MQ=39.71;MQ0=0;Map20=1;OAnc=G;QD=37.68;TS=HPGOMC;TSseq=G,G,G,C,G,A;bSC=814;mSC=0.000;pSC=0.244	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1653,126,0:0,0:0,0:0,0:26,17:0:39.71:0;1/1:20:60.19:783,60,0:0,0:0,0:0,0:7,13:0:37.00:0	+
9_133057987_A/G	9	133057987	G	ENSG00000148357	ENST00000415566	Transcript	NON_SYNONYMOUS_CODING	716	716	239	N/S	aAc/aGc	-	ENSP=ENSP00000389272;PolyPhen=benign(0);SIFT=tolerated(0.15);HGNC=HMCN2	A	G/G,G/G	A	A	A	N/N,N/N	rs10988681	0.98	.	-3.46	.	0.900	960	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.03;AN=4;CAnc=A;DP=81;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=A;GRP=-3.46;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=39.04;TS=HPGOMC;TSseq=A,A,A,N,A,A;bSC=960;pSC=0.900	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2063,157,0:0,0:0,0:27,25:0,0:0:37.00:0;1/1:29:87.28:1153,87,0:0,0:0,0:14,15:0,0:0:37.00:0	+
9_135930467_G/A	9	135930467	A	ENSG00000148308	ENST00000372089	Transcript	NON_SYNONYMOUS_CODING	1234	805	269	E/K	Gag/Aag	-	ENSP=ENSP00000361161;PolyPhen=benign(0.322);SIFT=deleterious(0);HGNC=GTF3C5	G	A/A,A/A	G	G	-	N/N,N/N	rs183530428	1.0	CpG	-0.926	0.000	.	769	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=37;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=-0.926;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;QD=37.03;TS=HPGMC;TSseq=G,G,G,G,A;bSC=769;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:25:72.24:959,72,0:16,9:0,0:0,0:0,0:0:37.00:0;1/1:12:36.12:480,36,0:8,4:0,0:0,0:0,0:0:37.00:0	+
9_136906991_A/G	9	136906991	G	ENSG00000169925	ENST00000303407	Transcript	NON_SYNONYMOUS_CODING	1484	1298	433	V/A	gTg/gCg	-	ENSP=ENSP00000305918;PolyPhen=benign(0.181);SIFT=tolerated(1);HGNC=BRD3	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	3.84	0.005	0.100	791	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=56;Dels=0.00;FS=0.000;GAnc=A;GRP=3.84;HRun=0;HaplotypeScore=2.9889;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=35.01;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=791;mSC=0.005;pSC=0.100	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:96.31:1258,96,0:0,0:0,0:12,22:1,0:0:37.00:0;1/1:21:63.19:802,63,0:0,0:0,0:14,7:0,0:0:37.00:0	-
9_139277766_C/T	9	139277766	T	ENSG00000165684	ENST00000298532	Transcript	NON_SYNONYMOUS_CODING	2224	1855	619	A/T	Gcg/Acg	-	ENSP=ENSP00000298532;PolyPhen=benign(0);SIFT=tolerated(0.64);HGNC=SNAPC4	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	-6.84	0.000	0.010	546	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.634;CAnc=C;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=C;GRP=-6.84;HRun=0;HaplotypeScore=0.9997;MQ=37.54;MQ0=0;MQRankSum=1.634;Map20=1;OAnc=C;QD=34.51;ReadPosRankSum=-0.842;TS=HPGOMC;TSseq=C,C,C,C,C,T;bSC=546;mSC=0.000;pSC=0.010	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:77.67:1310,78,0:0,0:0,0:0,0:17,19:0:37.54:0;1/1:17:51.17:680,51,0:0,0:0,0:0,0:9,8:0:37.00:0	-
9_139848309_C/T	9	139848309	T	ENSG00000184925	ENST00000371633	Transcript	NON_SYNONYMOUS_CODING	341	341	114	A/V	gCg/gTg	-	ENSP=ENSP00000360696;PolyPhen=possibly_damaging(0.739);SIFT=tolerated(0.64);HGNC=LCN12	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	0.915	.	0.020	889	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=49;Dels=0.00;FS=0.000;GAnc=C;GRP=0.915;HRun=0;HaplotypeScore=1.9852;MQ=36.73;MQ0=0;Map20=1;OAnc=C;QD=30.29;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=889;pSC=0.020	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:90.27:1154,90,0:0,0:0,0:0,0:22,15:0:36.73:0;1/1:12:33.10:419,33,0:0,0:0,0:0,0:9,3:0:36.15:0	+
9_139983339_A/G	9	139983339	G	ENSG00000177239	ENST00000371589	Transcript	NON_SYNONYMOUS_CODING	420	347	116	E/G	gAg/gGg	-	ENSP=ENSP00000360645;PolyPhen=benign(0);SIFT=tolerated(0.18);HGNC=MAN1B1	A	G/G,G/G	A	A	A	N/N,N/N	rs115335100	0.99	.	3.56	.	0.141	923	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=A;DP=73;Dels=0.01;FS=0.000;GAnc=A;GRP=3.56;HRun=2;HaplotypeScore=0.9665;MQ=38.92;MQ0=0;Map20=1;OAnc=A;QD=37.88;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=923;pSC=0.141	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1775,135,0:0,0:0,0:23,22:0,0:0:38.92:0;1/1:27:81.26:1043,81,0:0,0:0,0:14,13:0,0:0:37.00:0	+
9_140139289_C/T	9	140139289	T	ENSG00000188163	ENST00000388932	Transcript	NON_SYNONYMOUS_CODING	849	794	265	G/E	gGg/gAg	-	ENSP=ENSP00000373584;PolyPhen=benign(0);HGNC=FAM166A	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	-2.02	0.000	0.019	784	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.02;HRun=0;HaplotypeScore=0.0000;MQ=38.68;MQ0=0;Map20=1;OAnc=C;QD=33.92;TS=HPGOMC;TSseq=C,C,C,N,C,T;bSC=784;mSC=0.000;pSC=0.019	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:93.29:1220,93,0:0,0:0,0:0,0:15,19:0:38.68:0;1/1:28:84.26:1106,84,0:0,0:0,0:0,0:18,10:0:37.00:0	-
9_140396133_G/A	9	140396133	A	ENSG00000130653	ENST00000277531	Transcript	NON_SYNONYMOUS_CODING	1632	1445	482	A/V	gCa/gTa	-	ENSP=ENSP00000277531;PolyPhen=possibly_damaging(0.889);SIFT=deleterious(0.01);HGNC=PNPLA7	G	A/A,A/A	G	G	-	N/N,N/N	.	1	.	3.33	0.008	0.094	878	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.427;CAnc=G;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=3.33;HRun=0;HaplotypeScore=1.9968;MQ=37.81;MQ0=0;MQRankSum=-1.733;Map20=1;QD=33.53;ReadPosRankSum=-1.529;TS=HPGMC;TSseq=G,G,G,G,G;bSC=878;mSC=0.008;pSC=0.094	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:67.08:1274,67,0:17,19:0,0:0,1:0,0:0:37.81:0;1/1:15:42.14:548,42,0:9,5:0,0:0,0:1,0:0:37.00:0	-
9_140409877_C/A	9	140409877	A	ENSG00000130653	ENST00000277531	Transcript	NON_SYNONYMOUS_CODING	1291	1104	368	E/D	gaG/gaT	-	ENSP=ENSP00000277531;PolyPhen=benign(0.005);SIFT=tolerated(0.54);HGNC=PNPLA7	C	A/A,A/A	C	C	C	N/N,N/N	rs3750379	0.94	.	.	.	.	900	.	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.23;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=C;DP=64;Dels=0.00;FS=0.000;GAnc=C;HRun=0;HaplotypeScore=0.0000;MQ=38.64;MQ0=0;OAnc=C;QD=35.79;TS=HPGOMC;TSseq=C,-,C,N,-,C;bSC=900	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1321,102,0:17,19:0,0:0,0:0,0:0:38.64:0;1/1:28:84.27:1112,84,0:15,13:0,0:0,0:0,0:0:37.00:0	-
10_14816448_G/A	10	14816448	A	ENSG00000065809	ENST00000181796	Transcript	NON_SYNONYMOUS_CODING	449	215	72	A/V	gCt/gTt	-	ENSP=ENSP00000181796;PolyPhen=benign(0.002);SIFT=tolerated(0.13);HGNC=FAM107B	G	A/A,A/A	G	G	G	N/N,N/N	rs11259332	0.94	.	3.25	0.004	0.190	911	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AMR_AF=0.01;AN=4;ASN_AF=0.22;CAnc=G;DP=87;Dels=0.00;FS=0.000;GAnc=G;GRP=3.25;HRun;HaplotypeScore=0.0000;MQ=38.03;MQ0=0;Map20=1;OAnc=G;QD=37.40;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=911;mSC=0.004;pSC=0.190	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2202,169,0:23,35:0,0:0,0:0,0:0:38.03:0;1/1:29:87.25:1098,87,0:16,13:0,0:0,0:0,0:0:37.00:0	-
10_14862140_C/A	10	14862140	A	ENSG00000185267	ENST00000378442	Transcript	NON_SYNONYMOUS_CODING	601	97	33	A/S	Gca/Tca	-	ENSP=ENSP00000367703;PolyPhen=benign(0.145);SIFT=tolerated(1);HGNC=CDNF	C	A/A,A/A	C	C	C	N/N,N/N	rs61740068	0.99	.	5.9	0.849	0.737	594	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AMR_AF=0.01;AN=4;BaseQRankSum=-1.039;CAnc=C;DP=81;Dels=0.00;FS=0.000;GAnc=C;GRP=5.9;HRun=0;HaplotypeScore=1.9995;MQ=39.41;MQ0=0;MQRankSum=0.485;Map20=1;OAnc=C;QD=36.98;ReadPosRankSum=1.455;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=594;mSC=0.849;pSC=0.737	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1882,110,0:34,14:1,0:0,0:0,0:0:39.41:0;1/1:31:93.30:1227,93,0:19,12:0,0:0,0:0,0:0:36.88:0	-
10_15256297_C/G	10	15256297	G	ENSG00000148468	ENST00000378116	Transcript	NON_SYNONYMOUS_CODING	1297	1290	430	E/D	gaG/gaC	-	ENSP=ENSP00000367356;PolyPhen=possibly_damaging(0.719);SIFT=tolerated(0.5);HGNC=FAM171A1	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	-1.31	0.985	0.956	720	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.702;CAnc=C;DP=53;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.31;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=0.047;Map20=1;OAnc=C;QD=36.04;ReadPosRankSum=-0.796;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=720;mSC=0.985;pSC=0.956	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:71.35:1366,71,0:0,0:0,1:12,24:0,0:0:37.00:0;1/1:16:48.16:640,48,0:0,0:0,0:10,6:0,0:0:37.00:0	-
10_15719621_C/G	10	15719621	G	ENSG00000077943	ENST00000378076	Transcript	NON_SYNONYMOUS_CODING	1000	646	216	V/L	Gtg/Ctg	-	ENSP=ENSP00000367316;PolyPhen=benign(0.023);SIFT=tolerated(1);HGNC=ITGA8	C	G/G,G/G	C	C	C	N/N,N/N	rs7895372	0.97	.	4.62	0.573	0.509	888	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.01;AN=4;CAnc=C;DP=80;Dels=0.00;FS=0.000;GAnc=C;GRP=4.62;HRun=0;HaplotypeScore=0.9997;MQ=40.05;MQ0=0;Map20=1;OAnc=C;QD=38.35;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=888;mSC=0.573;pSC=0.509	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2219,172,0:0,0:0,0:26,31:0,0:0:40.05:0;1/1:23:69.22:903,69,0:0,0:0,0:13,10:0,0:0:37.00:0	-
10_19616498_A/G	10	19616498	G	ENSG00000204740	ENST00000377266	Transcript	NON_SYNONYMOUS_CODING	1510	1510	504	I/V	Atc/Gtc	-	ENSP=ENSP00000366477;PolyPhen=benign(0.083);SIFT=tolerated(0.5);HGNC=C10orf112	A	G/G,G/G	A	A	A	N/N,N/N	rs143588256	1.0	.	3.84	0.066	0.116	953	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=A;DP=69;Dels=0.00;FS=0.000;GAnc=A;GRP=3.84;HRun=0;HaplotypeScore=0.0000;MQ=38.33;MQ0=0;Map20=1;OAnc=A;QD=38.34;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=953;mSC=0.066;pSC=0.116	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1643,126,0:0,0:0,0:19,21:0,0:0:38.33:0;1/1:27:81.26:1053,81,0:0,0:0,0:17,10:0,0:0:37.00:0	+
10_19678129_C/T	10	19678129	T	ENSG00000204740	ENST00000377266	Transcript	NON_SYNONYMOUS_CODING	2632	2632	878	R/W	Cgg/Tgg	-	ENSP=ENSP00000366477;PolyPhen=benign(0);SIFT=tolerated(0.13);HGNC=C10orf112	C	T/T,T/T	C	C	T	N/N,N/N	.	0.96	CpG	-0.488	0.000	0.006	929	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.05;AMR_AF=0.09;AN=4;ASN_AF=0.03;BaseQRankSum=-0.877;CAnc=C;CpG;DP=86;Dels=0.00;FS=7.525;GAnc=C;GRP=-0.488;HRun=0;HaplotypeScore=3.9978;MQ=40.58;MQ0=0;MQRankSum=0.652;Map20=1;OAnc=T;QD=34.84;ReadPosRankSum=-0.112;TS=HPGOMC;TSseq=C,C,C,T,T,T;bSC=929;mSC=0.000;pSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:82.51:1949,83,0:0,0:2,0:0,0:21,31:0:40.58:0;1/1:31:93.31:1240,93,0:0,0:0,0:0,0:15,16:0:37.00:0	+
10_25197541_C/T	10	25197541	T	ENSG00000099256	ENST00000376376	Transcript	NON_SYNONYMOUS_CODING	430	413	138	S/N	aGc/aAc	-	ENSP=ENSP00000365556;PolyPhen=benign(0.013);SIFT=deleterious(0.02);HGNC=PRTFDC1	C	T/T,T/T	C	C	C	N/N,N/N	rs78357420	0.97	RM	-0.518	0.012	0.011	847	0	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.02;AN=4;ASN_AF=0.10;CAnc=C;DP=66;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.518;HRun;HaplotypeScore=0.0000;MQ=36.52;MQ0;Map20=0;OAnc=C;QD=36.54;RM;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=847;mSC=0.012;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1458,111,0:0,0:1,0:0,0:20,18:0:36.52:1;1/1:27:81.27:1080,81,0:0,0:0,0:0,0:19,8:0:37.00:0	-
10_38345465_G/C	10	38345465	C	ENSG00000189180	ENST00000307441	Transcript	NON_SYNONYMOUS_CODING	2410	2410	804	D/H	Gat/Cat	-	ENSP=ENSP00000304268;PolyPhen=benign(0);SIFT=tolerated(0.48);HGNC=ZNF33A	G	C/C,C/C	G	G	-	N/N,N/N	rs10508862	0.95	.	-1.36	0.000	.	679	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AMR_AF=0.09;AN=4;CAnc=G;DP=80;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=G;GRP=-1.36;HRun=0;HaplotypeScore=0.9997;MQ=38.96;MQ0=0;Map20=1;QD=38.63;TS=HPG;TSseq=G,G,G;bSC=679;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1771,135,0:0,0:26,19:0,0:0,0:0:38.96:0;1/1:35:99:1380,105,0:0,0:15,20:0,0:0,0:0:37.00:0	+
10_43971248_C/G	10	43971248	G	ENSG00000243660	ENST00000315429	Transcript	NON_SYNONYMOUS_CODING	175	176	59	P/R	cCg/cGg	-	ENSP=ENSP00000314093;PolyPhen=benign(0.217);SIFT=deleterious(0);HGNC=ZNF487P	C	G/G,G/G	C	C	T	N/N,N/N	rs11816311	0.97	CpG	-0.81	0.000	0.373	809	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.01;AN=4;ASN_AF=0.04;BaseQRankSum=-1.212;CAnc=C;CpG;DP=75;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=-0.81;HRun;HaplotypeScore=0.0000;MQ=38.05;MQ0=0;MQRankSum=-1.858;Map20=1;OAnc=T;QD=34.22;ReadPosRankSum=-0.781;TS=HPGOMC;TSseq=C,C,C,T,T,T;UR;bSC=809;mSC=0.000;pSC=0.373	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:55.42:1607,55,0:0,0:1,1:24,20:0,0:0:38.05:0;1/1:29:84.24:1027,84,0:0,0:0,0:18,11:0,0:0:35.81:0	+
10_43971579_T/G	10	43971579	G	ENSG00000243660	ENST00000315429	Transcript	NON_SYNONYMOUS_CODING	247	248	83	V/G	gTg/gGg	-	ENSP=ENSP00000314093;PolyPhen=possibly_damaging(0.772);SIFT=deleterious(0);HGNC=ZNF487P	T	G/G,G/G	T	T	T	N/N,N/N	rs41306552	0.97	.	1.45	0.000	0.061	809	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.01;AN=4;ASN_AF=0.04;CAnc=T;DP=92;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=1.45;HRun=2;HaplotypeScore=0.9665;MQ=38.90;MQ0=0;Map20=1;OAnc=T;QD=38.63;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=809;mSC=0.000;pSC=0.061	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2428,187,0:0,0:0,0:26,36:0,0:0:38.90:0;1/1:30:50.29:1120,50,0:0,0:0,0:10,19:0,1:0:37.00:0	+
10_45467204_T/C	10	45467204	C	ENSG00000107551	ENST00000374411	Transcript	NON_SYNONYMOUS_CODING	319	319	107	C/R	Tgt/Cgt	-	ENSP=ENSP00000363532;PolyPhen=possibly_damaging(0.694);SIFT=deleterious(0);HGNC=RASSF4	T	C/C,C/C	T	T	T	N/N,N/N	rs2274886	0.94	.	4.21	0.056	0.221	813	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.06;AMR_AF=0.02;AN=4;ASN_AF=0.12;CAnc=T;DP=70;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=4.21;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.73;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=813;mSC=0.056;pSC=0.221	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1660,126,0:0,0:18,24:0,0:0,0:0:37.00:0;1/1:28:84.27:1098,84,0:0,0:10,18:0,0:0,0:0:37.00:0	+
10_51584644_A/G	10	51584644	G	ENSG00000138293	ENST00000344348	Transcript	NON_SYNONYMOUS_CODING	883	743	248	N/S	aAt/aGt	-	ENSP=ENSP00000344552;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=NCOA4	A	G/G,G/G	A	A	A	N/N,N/N	rs117257055	0.99	.	-0.178	0.868	0.558	690	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=A;DP=86;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.178;HRun=0;HaplotypeScore=0.0000;MQ=35.85;MQ0=4;Map20=1;OAnc=A;QD=35.00;TS=HPGOM;TSseq=A,A,G,A,G;bSC=690;mSC=0.868;pSC=0.558	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1818,144,0:0,0:0,0:21,30:0,0:0:35.85:2;1/1:35:99:1222,99,0:0,0:0,0:16,19:0,0:0:33.86:2	+
10_60562867_A/T	10	60562867	T	ENSG00000122870	ENST00000263103	Transcript	NON_SYNONYMOUS_CODING	948	924	308	E/D	gaA/gaT	-	ENSP=ENSP00000263103;PolyPhen=possibly_damaging(0.622);SIFT=tolerated(0.42);HGNC=BICC1	A	T/T,T/T	A	A	A	N/N,N/N	rs77500675	0.97	.	-2.4	0.994	0.973	775	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.10;AMR_AF=0.02;AN=4;CAnc=A;DP=64;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.4;HRun=0;HaplotypeScore=0.9997;MQ=37.73;MQ0=0;Map20=1;OAnc=A;QD=36.81;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=775;mSC=0.994;pSC=0.973	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1542,117,0:0,0:0,0:0,0:24,17:0:37.73:0;1/1:23:66.22:880,66,0:0,0:0,0:0,0:14,9:0:37.00:0	+
10_71874784_C/T	10	71874784	T	ENSG00000042286	ENST00000307864	Transcript	NON_SYNONYMOUS_CODING	1076	862	288	D/N	Gac/Aac	-	ENSP=ENSP00000312370;PolyPhen=benign(0.04);SIFT=tolerated(0.75);HGNC=AIFM2	C	T/T,T/T	C	C	C	N/N,N/N	rs2271694	0.94	CpG	4.02	0.013	0.361	814	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.01;AMR_AF=0.10;AN=4;ASN_AF=0.15;BaseQRankSum=0.866;CAnc=C;CpG;DP=63;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=4.02;HRun;HaplotypeScore=0.9997;MQ=39.17;MQ0=0;MQRankSum=0.289;Map20=1;OAnc=C;QD=36.00;ReadPosRankSum=0.193;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=814;mSC=0.013;pSC=0.361	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:68.34:1329,68,0:0,0:0,1:0,0:15,20:0:39.17:0;1/1:27:81.25:1055,81,0:0,0:0,0:0,0:18,9:0:37.00:0	-
10_75562523_T/C	10	75562523	C	ENSG00000166507	ENST00000299641	Transcript	NON_SYNONYMOUS_CODING	3037	2066	689	D/G	gAt/gGt	-	ENSP=ENSP00000299641;PolyPhen=benign(0);SIFT=tolerated(0.06);HGNC=NDST2	T	C/C,C/C	T	T	T	N/N,N/N	rs73274599	0.99	.	2.29	0.999	0.880	32	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;BaseQRankSum=1.057;CAnc=T;DP=91;Dels=0.00;FS=0.000;GAnc=T;GRP=2.29;HRun;HaplotypeScore=0.9997;MQ=38.08;MQ0=0;MQRankSum=0.697;Map20=1;OAnc=T;QD=35.48;ReadPosRankSum=-2.181;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=32;mSC=0.999;pSC=0.880	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:91.15:1984,91,0:0,0:26,26:0,0:1,1:0:38.08:0;1/1:36:99:1382,108,0:0,0:19,17:0,0:0,0:0:37.00:0	-
10_79799959_C/A	10	79799959	A	ENSG00000138326	ENST00000435275	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	533	391	131	Q/K	Cag/Aag	-	ENSP=ENSP00000415549;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=RPS24	C	A/A,A/A	C	C	C	N/N,N/N	rs7899453	0.93	.	4.12	1.000	.	653	0.5	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.30;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=C;DP=85;Dels=0.00;FS=0.000;GAnc=C;GRP=4.12;HRun;HaplotypeScore=0.0000;MQ=37.93;MQ0=0;Map20=0.5;OAnc=C;QD=37.68;TS=HPGOMC;TSseq=C,C,C,C,T,C;UR;bSC=653;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2294,175,0:25,35:0,0:0,0:0,0:0:37.93:0;1/1:25:75.24:981,75,0:12,13:0,0:0,0:0,0:0:36.60:0	+
10_89621800_A/T	10	89621800	T	ENSG00000227268	ENST00000445946	Transcript	NON_SYNONYMOUS_CODING	445	445	149	W/R	Tgg/Agg	-	ENSP=ENSP00000392204;PolyPhen=possibly_damaging(0.842);HGNC=KLLN	A	T/T,T/T	A	A	A	N/N,N/N	rs144811392	0.99	.	0.222	0.000	.	583	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;CAnc=A;DP=51;Dels=0.00;FS=0.000;GAnc=A;GRP=0.222;HRun=0;HaplotypeScore=0.0000;MQ=37.96;MQ0=0;Map20=1;OAnc=A;QD=37.21;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=583;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:90.29:1187,90,0:0,0:0,1:0,0:11,19:0:37.96:0;1/1:20:60.20:793,60,0:0,0:0,0:0,0:14,6:0:37.00:0	-
10_93668140_T/C	10	93668140	C	ENSG00000174721	ENST00000311575	Transcript	NON_SYNONYMOUS_CODING	751	587	196	K/R	aAa/aGa	-	ENSP=ENSP00000339067;PolyPhen=benign(0.014);SIFT=tolerated(0.26);HGNC=FGFBP3	T	C/C,C/C	T	T	T	N/N,N/N	rs11186740	0.99	.	-0.645	0.000	.	360	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.03;AN=4;CAnc=T;DP=61;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=-0.645;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=37.50;TS=HPGOMC;TSseq=T,T,-,T,T,T;bSC=360;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1646,126,0:0,0:10,32:0,0:0,0:0:37.00:0;1/1:18:54.18:720,54,0:0,0:6,12:0,0:0,0:0:37.00:0	-
10_93668408_C/T	10	93668408	T	ENSG00000174721	ENST00000311575	Transcript	NON_SYNONYMOUS_CODING	483	319	107	A/T	Gcg/Acg	-	ENSP=ENSP00000339067;PolyPhen=benign(0.025);SIFT=tolerated(0.44);HGNC=FGFBP3	C	T/T,T/T	C	C	C	N/N,N/N	rs10881994	0.91	CpG	-6.19	0.342	.	360	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.02;AMR_AF=0.08;AN=4;ASN_AF=0.18;BaseQRankSum=-1.589;CAnc=C;CpG;DP=43;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=C;GRP=-6.19;HRun=0;HaplotypeScore=1.7834;MQ=37.00;MQ0=0;MQRankSum=0.289;Map20=1;OAnc=C;QD=32.22;ReadPosRankSum=-0.578;TS=HPGOMC;TSseq=C,C,-,C,C,A;bSC=360;mSC=0.342	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:26:32.23:871,32,0:0,0:0,1:0,0:12,13:0:37.00:0;1/1:17:51.16:654,51,0:0,0:0,0:0,0:12,5:0:37.00:0	-
10_97687049_G/C	10	97687049	C	ENSG00000173088	ENST00000371202	Transcript	NON_SYNONYMOUS_CODING	400	260	87	S/T	aGt/aCt	-	ENSP=ENSP00000360245;PolyPhen=benign(0.313);SIFT=deleterious(0.01);HGNC=C10orf131	G	C/C,C/C	G	G	G	N/N,N/N	rs41291582	0.99	.	-2.19	0.865	.	530	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.02;AN=4;CAnc=G;DP=91;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=-2.19;HRun=0;HaplotypeScore=0.9997;MQ=38.77;MQ0=0;Map20=1;OAnc=G;QD=39.02;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=530;mSC=0.865	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1984,150,0:0,0:17,33:0,0:0,0:0:38.77:0;1/1:41:99:1615,123,0:0,0:22,19:0,0:0,0:0:37.00:0	+
10_100152316_G/A	10	100152316	A	ENSG00000119943	ENST00000370575	Transcript	NON_SYNONYMOUS_CODING	984	935	312	A/V	gCg/gTg	-	ENSP=ENSP00000359607;PolyPhen=benign(0.003);SIFT=tolerated(0.36);HGNC=PYROXD2	G	A/A,A/A	G	G	G	N/N,N/N	rs112717341	1.0	CpG	-1.24	0.218	.	768	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=G;CpG;DP=75;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.24;HRun=0;HaplotypeScore=0.0000;MQ=38.10;MQ0=0;Map20=1;OAnc=G;QD=37.38;TS=HPGOMC;TSseq=G,G,G,G,G,A;bSC=768;mSC=0.218	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1715,132,0:22,22:0,1:0,0:0,0:0:38.10:0;1/1:30:90.29:1172,90,0:12,18:0,0:0,0:0,0:0:37.00:0	-
10_100152784_C/G	10	100152784	G	ENSG00000119943	ENST00000370575	Transcript	NON_SYNONYMOUS_CODING	891	842	281	G/A	gGc/gCc	-	ENSP=ENSP00000359607;PolyPhen=benign(0.02);SIFT=tolerated(0.39);HGNC=PYROXD2	C	G/G,G/G	C	C	C	N/N,N/N	.	1	RM	3.69	0.991	.	769	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=47;Dels=0.00;FS=0.000;GAnc=C;GRP=3.69;HRun;HaplotypeScore=0.0000;MQ=34.39;MQ0=0;Map20=1;OAnc=C;QD=35.21;RM;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=769;mSC=0.991	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:84.22:1019,84,0:0,0:0,0:12,15:0,0:0:34.39:0;1/1:19:57.16:728,57,0:0,0:0,0:7,12:0,0:0:37.00:0	-
10_100152812_C/T	10	100152812	T	ENSG00000119943	ENST00000370575	Transcript	NON_SYNONYMOUS_CODING	863	814	272	G/S	Ggc/Agc	-	ENSP=ENSP00000359607;PolyPhen=benign(0.003);SIFT=tolerated(0.4);HGNC=PYROXD2	C	T/T,T/T	C	C	C	N/N,N/N	.	1	RM	-0.84	0.791	.	769	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=61;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.84;HRun=0;HaplotypeScore=0.0000;MQ=35.33;MQ0=0;Map20=1;OAnc=C;QD=35.54;RM;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=769;mSC=0.791	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1348,108,0:0,0:0,0:0,0:17,19:0:35.33:0;1/1:24:72.21:920,72,0:0,0:0,0:0,0:11,13:0:37.00:0	-
10_100202971_C/G	10	100202971	G	ENSG00000107521	ENST00000325103	Transcript	NON_SYNONYMOUS_CODING	261	27	9	E/D	gaG/gaC	-	ENSP=ENSP00000326649;PolyPhen=probably_damaging(0.926);SIFT=tolerated(0.08);HGNC=HPS1	C	G/G,G/G	C	C	C	N/N,N/N	rs7914192	1.0	.	0.483	0.979	.	844	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AMR_AF=0.01;AN=4;BaseQRankSum=0.538;CAnc=C;DP=45;Dels=0.00;FS=5.593;GAnc=C;GRP=0.483;HRun=0;HaplotypeScore=0.9997;MQ=38.03;MQ0=0;MQRankSum=0.179;Map20=1;OAnc=C;QD=36.25;ReadPosRankSum=1.494;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=844;mSC=0.979	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:47.28:1084,47,0:0,0:1,0:7,21:0,0:0:38.03:0;1/1:16:48.15:619,48,0:0,0:0,0:6,10:0,0:0:37.00:0	-
10_100202987_A/G	10	100202987	G	ENSG00000107521	ENST00000325103	Transcript	NON_SYNONYMOUS_CODING	245	11	4	V/A	gTc/gCc	-	ENSP=ENSP00000326649;PolyPhen=possibly_damaging(0.551);SIFT=deleterious(0.01);HGNC=HPS1	A	G/G,G/G	A	A	A	N/N,N/N	rs58548334	0.97	.	4.62	0.324	.	844	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.06;AMR_AF=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=-1.456;CAnc=A;DP=42;Dels=0.00;EUR_AF=0.04;FS=5.528;GAnc=A;GRP=4.62;HRun;HaplotypeScore=1.6648;MQ=39.34;MQ0=0;MQRankSum=1.456;Map20=1;OAnc=A;QD=35.26;ReadPosRankSum=-0.624;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=844;mSC=0.324	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:25:35.23:914,35,0:1,0:0,0:6,18:0,0:0:39.34:0;1/1:17:51.14:631,51,0:0,0:0,0:8,9:0,0:0:37.00:0	-
10_101560169_G/A	10	101560169	A	ENSG00000023839	ENST00000370449	Transcript	NON_SYNONYMOUS_CODING	1171	1058	353	R/H	cGt/cAt	-	ENSP=ENSP00000359478;PolyPhen=benign(0.073);SIFT=tolerated(0.11);HGNC=ABCC2	G	A/A,A/A	G	G	G	N/N,N/N	rs7080681	0.99	CpG	-11.6	0.000	.	369	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AN=4;CAnc=G;CpG;DP=72;Dels=0.00;FS=0.000;GAnc=G;GRP=-11.6;HRun=0;HaplotypeScore=0.0000;MQ=40.21;MQ0=0;Map20=1;OAnc=G;QD=37.15;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=369;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1705,132,0:22,20:0,0:0,0:0,0:0:40.21:0;1/1:27:81.24:1043,81,0:19,8:0,0:0,0:0,0:0:37.00:0	+
10_115350572_A/G	10	115350572	G	ENSG00000197893	ENST00000359988	Transcript	NON_SYNONYMOUS_CODING	4885	4721	1574	M/T	aTg/aCg	-	ENSP=ENSP00000353078;PolyPhen=benign(0.005);SIFT=tolerated(0.41);HGNC=NRAP	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-1.58	0.949	.	577	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=85;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.58;HRun=0;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.82;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=577;mSC=0.949	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2207,169,0:0,0:0,0:27,28:0,0:0:37.00:0;1/1:29:47.28:1065,47,0:0,1:0,0:14,14:0,0:0:37.00:0	-
10_115605542_C/G	10	115605542	G	ENSG00000198924	ENST00000361384	Transcript	NON_SYNONYMOUS_CODING	3198	2280	760	K/N	aaG/aaC	-	ENSP=ENSP00000355185;PolyPhen=benign(0.341);SIFT=deleterious(0);HGNC=DCLRE1A	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	0.236	0.967	.	461	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=84;Dels=0.00;FS=0.000;GAnc=C;GRP=0.236;HRun=0;HaplotypeScore=0.9997;MQ=39.09;MQ0=0;Map20=1;OAnc=C;QD=38.06;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=461;mSC=0.967	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1631,123,0:0,0:0,0:18,23:1,0:0:39.09:0;1/1:42:99:1630,123,0:0,0:0,0:24,18:0,0:0:37.00:0	-
10_115636367_A/G	10	115636367	G	ENSG00000196865	ENST00000369301	Transcript	NON_SYNONYMOUS_CODING	631	419	140	N/S	aAc/aGc	-	ENSP=ENSP00000358307;PolyPhen=benign(0.271);SIFT=tolerated(0.16);HGNC=NHLRC2	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	5.61	0.989	.	478	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=75;Dels=0.00;FS=0.000;GAnc=A;GRP=5.61;HRun=0;HaplotypeScore=0.0000;MQ=36.75;MQ0=0;Map20=1;OAnc=A;QD=38.66;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=478;mSC=0.989	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1618,123,0:0,0:0,0:19,21:0,0:0:36.75:0;1/1:34:99:1318,102,0:0,0:0,0:18,16:0,0:0:37.00:0	+
10_124600798_C/A	10	124600798	A	ENSG00000138161	ENST00000368904	Transcript	NON_SYNONYMOUS_CODING	1079	129	43	E/D	gaG/gaT	-	ENSP=ENSP00000357900;PolyPhen=benign(0.002);SIFT=tolerated(0.52);HGNC=CUZD1	C	A/A,A/A	C	C	C	N/N,N/N	rs35299879	0.98	.	-3.27	0.009	.	768	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AN=4;ASN_AF=0.04;CAnc=C;DP=88;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.27;HRun=0;HaplotypeScore=0.0000;MQ=38.70;MQ0=0;Map20=1;OAnc=C;QD=36.08;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=768;mSC=0.009	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1909,147,0:17,35:0,0:0,0:0,0:0:38.70:0;1/1:36:99:1400,108,0:20,16:0,0:0,0:0,0:0:37.00:0	-
10_124600834_G/C	10	124600834	C	ENSG00000138161	ENST00000368904	Transcript	NON_SYNONYMOUS_CODING	1043	93	31	S/R	agC/agG	-	ENSP=ENSP00000357900;PolyPhen=benign(0.001);SIFT=tolerated(0.57);HGNC=CUZD1	G	C/C,C/C	G	G	G	N/N,N/N	rs34246902	0.98	.	0.483	0.361	.	768	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AN=4;ASN_AF=0.04;CAnc=G;DP=69;Dels=0.00;FS=0.000;GAnc=G;GRP=0.483;HRun;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;OAnc=G;QD=38.68;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=768;mSC=0.361	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1735,132,0:0,0:17,27:0,0:0,0:0:37.68:0;1/1:25:75.25:995,75,0:0,0:14,11:0,0:0,0:0:37.00:0	-
10_129883383_C/T	10	129883383	T	ENSG00000132334	ENST00000439034	Transcript	NON_SYNONYMOUS_CODING	2064	1982	661	P/L	cCa/cTa	-	ENSP=ENSP00000415807;PolyPhen=benign(0.013);SIFT=tolerated(1);HGNC=PTPRE	C	T/T,T/T	C	C	C	N/N,N/N	rs151117665	0.99	.	-0.552	0.000	.	906	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.02;AN=4;CAnc=C;DP=58;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-0.552;HRun=0;HaplotypeScore=0.0000;MQ=38.68;MQ0=0;Map20=1;OAnc=C;QD=38.33;TS=HPGOMC;TSseq=C,C,C,C,C,T;bSC=906;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1375,105,0:0,0:0,0:0,0:18,17:0:38.68:0;1/1:23:69.21:872,69,0:0,0:0,0:0,0:14,9:0:36.92:0	+
10_134886558_G/A	10	134886558	A	ENSG00000197177	ENST00000368577	Transcript	NON_SYNONYMOUS_CODING	592	592	198	A/T	Gca/Aca	-	ENSP=ENSP00000357566;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=GPR123	G	A/A,A/A	G	G	G	N/N,N/N	rs11101757	0.97	CpG	-2.7	0.000	.	970	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.05;AMR_AF=0.03;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=53;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=-2.7;HRun=0;HaplotypeScore=0.9916;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=36.13;TS=HPGOM;TSseq=G,G,G,G,G;bSC=970;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1370,105,0:15,21:0,0:0,0:0,0:0:37.00:0;1/1:16:48.15:620,48,0:7,9:0,0:0,0:0,0:0:37.00:0	+
11_563303_C/T	11	563303	T	ENSG00000099849	ENST00000344375	Transcript	NON_SYNONYMOUS_CODING	979	937	313	P/S	Cct/Tct	-	ENSP=ENSP00000344226;PolyPhen=benign(0.101);SIFT=tolerated(0.08);HGNC=RASSF7	C	T/T,T/T	C	C	C	N/N,N/N	rs139808560	1.0	.	-1.87	0.000	0.254	917	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=38;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.87;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.69;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=917;mSC=0.000;pSC=0.254	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:22:66.21:862,66,0:0,0:0,0:0,0:10,11:0:37.00:0;1/1:16:48.16:634,48,0:0,0:0,0:0,0:10,6:0:37.00:0	+
11_1278796_G/A	11	1278796	A	ENSG00000117983	ENST00000349637	Transcript	NON_SYNONYMOUS_CODING	16196	16138	5380	V/M	Gtg/Atg	-	ENSP=ENSP00000343037;PolyPhen=unknown(0);HGNC=MUC5B	G	A/A,A/A	G	G	G	N/N,N/N	rs55657020	0.98	CpG	0.711	0.021	0.375	940	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;BaseQRankSum=0.443;CAnc=G;CpG;DP=61;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=0.711;HRun=0;HaplotypeScore=3.9657;MQ=38.78;MQ0=0;MQRankSum=-1.007;Map20=1;OAnc=G;QD=35.27;ReadPosRankSum=-1.007;TS=HPGO;TSseq=G,G,G,N;bSC=940;mSC=0.021;pSC=0.375	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:89.38:1585,89,0:22,21:0,0:1,0:0,0:0:38.78:0;1/1:17:51.16:670,51,0:8,9:0,0:0,0:0,0:0:37.00:0	+
11_5461834_C/G	11	5461834	G	ENSG00000167359	ENST00000321307	Transcript	NON_SYNONYMOUS_CODING	902	902	301	G/A	gGg/gCg	-	ENSP=ENSP00000439622;PolyPhen=benign(0.017);SIFT=tolerated(0.86);HGNC=OR51I1	C	G/G,G/G	C	C	C	N/N,N/N	rs77336780	0.92	.	3.61	0.000	0.552	705	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.06;AMR_AF=0.07;AN=4;ASN_AF=0.15;CAnc=C;DP=72;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=3.61;HRun=0;HaplotypeScore=0.0000;MQ=39.09;MQ0=0;Map20=1;OAnc=C;QD=38.25;TS=HPGOC;TSseq=C,C,C,C,C;bSC=705;mSC=0.000;pSC=0.552	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1640,126,0:0,0:0,0:22,20:0,0:0:39.09:0;1/1:30:90.28:1159,90,0:0,0:0,0:15,15:0,0:0:37.00:0	-
11_5809424_A/G	11	5809424	G	ENSG00000181001	ENST00000317078	Transcript	NON_SYNONYMOUS_CODING	623	623	208	I/T	aTt/aCt	-	ENSP=ENSP00000322823;PolyPhen=possibly_damaging(0.45);SIFT=tolerated(0.11);HGNC=OR52N1	A	G/G,G/G	A	A	-	N/N,N/N	.	1	.	4.7	0.988	0.430	693	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=66;Dels=0.00;FS=0.000;GAnc=A;GRP=4.7;HRun=0;HaplotypeScore=0.0000;MQ=39.06;MQ0=0;Map20=1;QD=38.39;TS=HPG;TSseq=A,A,A;bSC=693;mSC=0.988;pSC=0.430	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1492,114,0:0,0:0,0:17,21:0,0:0:39.06:0;1/1:28:84.27:1100,84,0:0,0:0,0:13,15:0,0:0:37.00:0	-
11_6341400_C/T	11	6341400	T	ENSG00000170955	ENST00000303927	Transcript	NON_SYNONYMOUS_CODING	478	307	103	A/T	Gca/Aca	-	ENSP=ENSP00000307292;PolyPhen=probably_damaging(0.986);SIFT=tolerated(0.09);HGNC=PRKCDBP	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	4.9	0.003	0.162	808	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=34;Dels=0.00;FS=0.000;GAnc=C;GRP=4.9;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.37;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=808;mSC=0.003;pSC=0.162	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:23:69.20:892,69,0:0,0:0,0:0,0:14,9:0:37.00:0;1/1:11:33.10:428,33,0:0,0:0,0:0,0:5,6:0:37.00:0	-
11_6503335_G/T	11	6503335	T	ENSG00000132286	ENST00000254616	Transcript	NON_SYNONYMOUS_CODING	266	196	66	A/S	Gct/Tct	-	ENSP=ENSP00000254616;PolyPhen=possibly_damaging(0.712);SIFT=tolerated(0.1);HGNC=FXC1	G	T/T,T/T	G	G	G	N/N,N/N	rs60702727	0.99	CpG	5.83	1.000	0.987	461	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.01;BaseQRankSum=0.615;CAnc=G;CpG;DP=57;Dels=0.00;FS=0.000;GAnc=G;GRP=5.83;HRun=0;HaplotypeScore=0.0000;MQ=37.90;MQ0=0;MQRankSum=-0.615;Map20=1;OAnc=G;QD=33.78;ReadPosRankSum=0.950;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=461;mSC=1.000;pSC=0.987	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:53.30:1148,53,0:0,0:0,0:1,0:20,12:0:37.90:0;1/1:24:72.23:941,72,0:0,0:0,0:0,0:15,9:0:37.00:0	+
11_6585032_G/A	11	6585032	A	ENSG00000179532	ENST00000254579	Transcript	NON_SYNONYMOUS_CODING	10526	9962	3321	R/Q	cGa/cAa	-	ENSP=ENSP00000254579;PolyPhen=benign(0.005);SIFT=tolerated(0.34);HGNC=DNHD1	G	A/A,A/A	G	G	G	N/N,N/N	rs11604232	0.98	CpG	-7.06	0.033	0.700	440	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=55;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=-7.06;HRun;HaplotypeScore=0.9997;MQ=37.85;MQ0=0;Map20=1;OAnc=G;QD=38.38;TS=HPGOMC;TSseq=G,G,G,G,G,T;UR;bSC=440;mSC=0.033;pSC=0.700	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1376,105,0:22,13:0,0:0,0:0,0:0:37.85:0;1/1:20:60.19:779,60,0:15,5:0,0:0,0:0,0:0:37.00:0	+
11_7083620_T/C	11	7083620	C	ENSG00000158077	ENST00000299481	Transcript	NON_SYNONYMOUS_CODING	3207	2861	954	L/S	tTg/tCg	-	ENSP=ENSP00000299481;PolyPhen=benign(0.287);SIFT=tolerated(0.75);HGNC=NLRP14	T	C/C,C/C	T	T	T	N/N,N/N	rs117583918	0.98	.	1.03	0.000	0.099	686	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.03;AMR_AF=0.03;AN=4;BaseQRankSum=1.567;CAnc=T;DP=101;Dels=0.00;EUR_AF=0.03;FS=7.844;GAnc=T;GRP=1.03;HRun=0;HaplotypeScore=0.9997;MQ=38.58;MQ0=0;MQRankSum=-0.728;Map20=1;OAnc=T;QD=35.63;ReadPosRankSum=0.110;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=686;mSC=0.000;pSC=0.099	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:92.40:2028,92,0:0,0:21,32:0,0:2,0:0:38.58:0;1/1:45:99:1729,132,0:0,0:22,23:0,0:0,0:0:37.00:0	+
11_7652240_A/C	11	7652240	C	ENSG00000166387	ENST00000299492	Transcript	NON_SYNONYMOUS_CODING	1437	1049	350	E/A	gAa/gCa	-	ENSP=ENSP00000299492;PolyPhen=benign(0.012);SIFT=tolerated(0.28);HGNC=PPFIBP2	A	C/C,C/C	A	A	A	N/N,N/N	.	1	.	5.05	0.546	0.751	729	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=74;Dels=0.00;FS=0.000;GAnc=A;GRP=5.05;HRun=0;HaplotypeScore=0.0000;MQ=38.21;MQ0=0;Map20=1;OAnc=A;QD=38.67;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=729;mSC=0.546;pSC=0.751	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1928,147,0:0,0:28,21:0,0:0,0:0:38.21:0;1/1:25:75.24:987,75,0:0,0:14,11:0,0:0,0:0:37.00:0	+
11_7673029_T/C	11	7673029	C	ENSG00000166387	ENST00000299492	Transcript	NON_SYNONYMOUS_CODING	2778	2390	797	M/T	aTg/aCg	-	ENSP=ENSP00000299492;PolyPhen=benign(0.001);SIFT=tolerated(0.17);HGNC=PPFIBP2	T	C/C,C/C	T	T	T	N/N,N/N	rs77873429	0.93	.	5.77	0.995	0.127	670	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.26;AMR_AF=0.04;AN=4;ASN_AF=0.02;BaseQRankSum=1.417;CAnc=T;DP=78;Dels=0.00;FS=4.393;GAnc=T;GRP=5.77;HRun=0;HaplotypeScore=2.9889;MQ=36.54;MQ0=0;MQRankSum=-0.945;Map20=1;OAnc=T;QD=35.39;ReadPosRankSum=1.260;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=670;mSC=0.995;pSC=0.127	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1590,101,0:0,0:27,15:0,0:0,1:0:36.54:0;1/1:34:99:1355,102,0:0,0:16,18:0,0:0,0:0:37.00:0	+
11_7673049_C/G	11	7673049	G	ENSG00000166387	ENST00000299492	Transcript	NON_SYNONYMOUS_CODING	2798	2410	804	P/A	Cca/Gca	-	ENSP=ENSP00000299492;PolyPhen=benign(0.028);SIFT=tolerated(0.59);HGNC=PPFIBP2	C	G/G,G/G	C	C	C	N/N,N/N	rs77975665	0.93	.	4.84	0.415	0.524	670	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.24;AMR_AF=0.03;AN=4;ASN_AF=0.02;CAnc=C;DP=64;Dels=0.00;FS=0.000;GAnc=C;GRP=4.84;HRun=0;HaplotypeScore=0.0000;MQ=36.07;MQ0=0;Map20=1;OAnc=C;QD=37.03;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=670;mSC=0.415;pSC=0.524	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1662,132,0:0,0:0,0:22,22:0,0:0:36.07:0;1/1:20:60.17:753,60,0:0,0:0,0:11,9:0,0:0:36.49:0	+
11_7687128_G/A	11	7687128	A	ENSG00000166394	ENST00000299497	Transcript	NON_SYNONYMOUS_CODING	847	701	234	A/V	gCg/gTg	-	ENSP=ENSP00000299497;PolyPhen=benign(0);SIFT=tolerated(0.73);HGNC=CYB5R2	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	-1	0.000	0.026	747	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=70;Dels=0.00;FS=0.000;GAnc=G;GRP=-1;HRun=0;HaplotypeScore=0.0000;MQ=39.01;MQ0=0;Map20=1;OAnc=G;QD=37.54;TS=HPGOMC;TSseq=G,G,G,G,T,T;bSC=747;mSC=0.000;pSC=0.026	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1497,114,0:25,14:0,0:0,0:0,0:0:39.01:0;1/1:31:93.31:1240,93,0:15,16:0,0:0,0:0,0:0:37.00:0	-
11_8936464_T/C	11	8936464	C	ENSG00000166452	ENST00000299576	Transcript	NON_SYNONYMOUS_CODING	405	314	105	I/T	aTa/aCa	-	ENSP=ENSP00000299576;PolyPhen=benign(0.001);SIFT=tolerated(0.88);HGNC=AKIP1	T	C/C,C/C	T	T	T	N/N,N/N	rs35131475	0.98	.	-9.89	0.000	0.015	415	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;CAnc=T;DP=62;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=-9.89;HRun=0;HaplotypeScore=2.9992;MQ=39.83;MQ0=0;Map20=1;OAnc=T;QD=38.85;TS=HPGOMC;TSseq=T,T,T,T,T,A;bSC=415;mSC=0.000;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1626,123,0:0,0:20,21:0,0:0,0:0:39.83:0;1/1:21:60.20:800,60,0:1,0:11,9:0,0:0,0:0:37.00:0	+
11_10655609_C/T	11	10655609	T	ENSG00000072952	ENST00000308763	Transcript	NON_SYNONYMOUS_CODING	290	211	71	T/A	Acc/Gcc	-	ENSP=ENSP00000307885;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=MRVI1	T	C/C,C/C	T	T	T	N/N,N/N	rs2162044	0.97	.	-6.49	0.000	0.076	626	1	1000gALT=T;AC=0;AF=0.00;AF1000g=0.97;AFR_AF=0.89;AMR_AF=0.99;AN=4;ASN_AF=1.00;CAnc=T;DP=50;EUR_AF=0.99;GAnc=T;GRP=-6.49;MQ=40.49;MQ0=0;Map20=1;OAnc=T;TS=HPGOMC;TSseq=C,T,T,T,T,T;UR;bSC=626;mSC=0.000;pSC=0.076	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:33:96.31:0,96,1255:0,0:18,15:0,0:0,0:0:40.49:0;0/0:17:51.16:0,51,655:0,0:10,7:0,0:0,0:0:37.00:0	-
11_17555285_C/T	11	17555285	T	ENSG00000006611	ENST00000526181	Transcript	NON_SYNONYMOUS_CODING	137	50	17	R/Q	cGg/cAg	-	ENSP=ENSP00000437128;PolyPhen=benign(0);SIFT=tolerated(0.23);HGNC=USH1C	C	T/T,T/T	C	C	C	N/N,N/N	rs111326338	0.99	CpG	2.36	1.000	0.897	758	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.05;AN=4;BaseQRankSum=0.433;CAnc=C;CpG;DP=68;Dels=0.00;FS=0.000;GAnc=C;GRP=2.36;HRun=0;HaplotypeScore=2.9968;MQ=39.38;MQ0=0;MQRankSum=0.794;Map20=1;OAnc=C;QD=36.13;ReadPosRankSum=1.155;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=758;mSC=1.000;pSC=0.897	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1804,104,0:0,0:0,1:0,0:19,29:0:39.38:0;1/1:19:57.19:760,57,0:0,0:0,0:0,0:9,10:0:37.00:0	-
11_17632213_C/T	11	17632213	T	ENSG00000188162	ENST00000342528	Transcript	NON_SYNONYMOUS_CODING	2704	2420	807	S/F	tCc/tTc	-	ENSP=ENSP00000341666;PolyPhen=possibly_damaging(0.842);SIFT=deleterious(0.01);HGNC=OTOG	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	3.73	0.003	0.036	676	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.306;CAnc=C;DP=55;Dels=0.00;FS=0.000;GAnc=C;GRP=3.73;HRun;HaplotypeScore=0.0000;MQ=37.85;MQ0=0;MQRankSum=-0.306;Map20=1;OAnc=C;QD=34.55;ReadPosRankSum=-0.102;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=676;mSC=0.003;pSC=0.036	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:62.31:1242,62,0:0,0:0,1:0,0:12,22:0:37.85:0;1/1:20:60.19:787,60,0:0,0:0,0:0,0:12,8:0:37.00:0	+
11_17662573_G/A	11	17662573	A	ENSG00000188162	ENST00000399391	Transcript	NON_SYNONYMOUS_CODING	8161	8161	2721	D/N	Gac/Aac	-	ENSP=ENSP00000382323;PolyPhen=benign(0.149);SIFT=tolerated(0.08);HGNC=OTOG	G	A/A,A/A	G	G	G	N/N,N/N	rs189910531	1.0	CpG	3.68	0.829	0.358	742	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=58;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=3.68;HRun;HaplotypeScore=0.9789;MQ=36.71;MQ0=0;Map20=1;OAnc=G;QD=38.68;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=742;mSC=0.829;pSC=0.358	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1387,105,0:17,17:0,0:0,0:0,0:0:36.71:0;1/1:23:69.23:913,69,0:9,14:0,0:0,0:0,0:0:37.00:0	+
11_19247346_A/C	11	19247346	C	ENSG00000129173	ENST00000250024	Transcript	NON_SYNONYMOUS_CODING	2472	1959	653	I/M	atT/atG	-	ENSP=ENSP00000250024;PolyPhen=benign(0.007);SIFT=tolerated(0.15);HGNC=E2F8	A	C/C,C/C	A	A	A	N/N,N/N	.	1	.	0.772	0.953	0.945	805	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.452;CAnc=A;DP=77;Dels=0.00;FS=4.867;GAnc=A;GRP=0.772;HRun=0;HaplotypeScore=2.9992;MQ=38.19;MQ0=0;MQRankSum=0.527;Map20=1;OAnc=A;QD=37.04;ReadPosRankSum=1.205;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=805;mSC=0.953;pSC=0.945	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:98.44:1737,98,0:1,0:14,31:0,0:0,0:0:38.19:0;1/1:31:93.30:1222,93,0:0,0:14,17:0,0:0,0:0:37.00:0	-
11_32852172_G/A	11	32852172	A	ENSG00000135378	ENST00000257836	Transcript	NON_SYNONYMOUS_CODING	350	97	33	E/K	Gaa/Aaa	-	ENSP=ENSP00000257836;PolyPhen=benign(0.001);SIFT=tolerated(0.41);HGNC=PRRG4	G	A/A,A/A	G	G	G	N/N,N/N	rs33962176	0.93	.	2.84	0.725	0.524	482	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.06;AMR_AF=0.05;AN=4;CAnc=G;DP=72;Dels=0.00;EUR_AF=0.14;FS=0.000;GAnc=G;GRP=2.84;HRun=2;HaplotypeScore=0.0000;MQ=38.24;MQ0=0;Map20=1;OAnc=G;QD=38.29;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=482;mSC=0.725;pSC=0.524	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1871,144,0:21,25:0,0:0,0:0,0:0:38.24:0;1/1:24:72.24:958,72,0:14,10:0,0:0,0:0,0:0:37.00:0	+
11_33054856_C/T	11	33054856	T	ENSG00000121690	ENST00000241051	Transcript	NON_SYNONYMOUS_CODING	1483	1391	464	T/I	aCa/aTa	-	ENSP=ENSP00000241051;PolyPhen=benign(0.005);SIFT=tolerated(0.26);HGNC=DEPDC7	C	T/T,T/T	C	C	C	N/N,N/N	rs17852859	0.98	.	2.33	0.021	0.088	503	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;CAnc=C;DP=92;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=2.33;HRun=0;HaplotypeScore=0.0000;MQ=38.41;MQ0=0;Map20=1;OAnc=C;QD=35.88;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=503;mSC=0.021;pSC=0.088	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2294,175,0:0,0:0,0:0,0:35,27:0:38.41:0;1/1:29:87.28:1135,87,0:0,0:0,0:0,0:19,10:0:37.00:0	+
11_34988354_A/G	11	34988354	G	ENSG00000110435	ENST00000227868	Transcript	NON_SYNONYMOUS_CODING	893	809	270	N/S	aAt/aGt	-	ENSP=ENSP00000227868;PolyPhen=benign(0.003);SIFT=tolerated(0.8);HGNC=PDHX	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	4.41	0.114	0.304	732	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.717;CAnc=A;DP=84;Dels=0.00;FS=0.000;GAnc=A;GRP=4.41;HRun=0;HaplotypeScore=1.9864;MQ=39.51;MQ0=0;MQRankSum=-1.075;Map20=1;OAnc=A;QD=36.86;ReadPosRankSum=-0.299;TS=HPGOMC;TSseq=A,A,A,A,N,T;bSC=732;mSC=0.114;pSC=0.304	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2171,135,0:0,1:0,0:23,32:0,0:0:39.51:0;1/1:26:78.25:1022,78,0:0,0:0,0:12,14:0,0:0:37.00:0	+
11_43963843_C/A	11	43963843	A	ENSG00000187479	ENST00000339446	Transcript	NON_SYNONYMOUS_CODING	328	328	110	R/S	Cgc/Agc	-	ENSP=ENSP00000340667;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=C11orf96	C	A/A,A/A	C	C	C	N/N,N/N	rs68178331	0.91	CpG	.	.	.	923	.	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.15;AMR_AF=0.05;AN=4;ASN_AF=0.09;CAnc=C;CpG;DP=46;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=C;HRun=0;HaplotypeScore=0.0000;MQ=36.63;MQ0=0;OAnc=C;QD=37.66;TS=HPGOMC;TSseq=C,-,C,C,N,C;UR;bSC=923	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:27:81.25:1050,81,0:10,16:0,0:0,0:0,0:0:36.63:0;1/1:19:57.17:725,57,0:15,4:0,0:0,0:0,0:0:37.00:0	+
11_47380355_G/A	11	47380355	A	ENSG00000066336	ENST00000533968	Transcript	NON_SYNONYMOUS_CODING	667	533	178	P/L	cCg/cTg	-	ENSP=ENSP00000438846;PolyPhen=unknown(0);HGNC=SPI1	G	A/A,A/A	G	G	G	N/N,N/N	rs146054989	1.0	CpG,RM	-2.87	0.000	0.002	31	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=39;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=-2.87;HRun=0;HaplotypeScore=0.0000;MQ=38.24;MQ0=0;Map20=1;OAnc=G;QD=38.77;RM;TS=HPGOMC;TSseq=G,G,G,G,A,A;UR;bSC=31;mSC=0.000;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:24:72.24:963,72,0:10,14:0,0:0,0:0,0:0:38.24:0;1/1:15:45.14:578,45,0:5,10:0,0:0,0:0,0:0:37.00:0	-
11_47869855_C/A	11	47869855	A	ENSG00000030066	ENST00000378460	Transcript	NON_SYNONYMOUS_CODING	165	118	40	A/S	Gcc/Tcc	-	ENSP=ENSP00000367721;PolyPhen=benign(0.001);SIFT=tolerated(0.65);HGNC=NUP160	C	A/A,A/A	C	C	C	N/N,N/N	.	0.96	.	-2.6	0.954	0.008	18	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AN=4;ASN_AF=0.15;CAnc=C;DP=39;Dels=0.00;FS=0.000;GAnc=C;GRP=-2.6;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.93;TS=HPGOMC;TSseq=C,C,C,C,A,A;UR;bSC=18;mSC=0.954;pSC=0.008	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:84.27:1095,84,0:15,13:0,0:0,0:0,0:0:37.00:0;1/1:11:33.08:422,33,0:7,4:0,0:0,0:0,0:0:37.00:0	-
11_55371132_A/T	11	55371132	T	ENSG00000172188	ENST00000302231	Transcript	NON_SYNONYMOUS_CODING	743	718	240	S/T	Tct/Act	-	ENSP=ENSP00000306651;PolyPhen=benign(0.142);SIFT=deleterious(0.02);HGNC=OR4C11	A	T/T,T/T	A	A	-	N/N,N/N	rs7114415	0.97	.	3.16	.	.	145	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.02;AN=4;BaseQRankSum=0.753;CAnc=A;DP=72;Dels=0.00;EUR_AF=0.07;FS=3.617;GAnc=A;GRP=3.16;HRun=0;HaplotypeScore=0.9997;MQ=37.46;MQ0=0;MQRankSum=-1.431;Map20=1;QD=35.48;ReadPosRankSum=-1.657;TS=HPG;TSseq=A,A,A;bSC=145	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:98.43:1700,98,0:0,1:0,0:0,0:26,19:0:37.46:0;1/1:25:75.23:960,75,0:0,0:0,0:0,0:16,9:0:36.60:0	-
11_55681942_G/T	11	55681942	T	ENSG00000187612	ENST00000344514	Transcript	NON_SYNONYMOUS_CODING	117	117	39	F/L	ttC/ttA	-	ENSP=ENSP00000342448;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=OR5W2	G	T/T,T/T	G	G	-	N/N,N/N	rs17511797	0.96	.	-10	.	.	144	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.02;AN=4;CAnc=G;DP=98;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=G;GRP=-10;HRun=0;HaplotypeScore=2.9928;MQ=38.84;MQ0=0;Map20=1;QD=38.38;TS=HPG;TSseq=G,G,G;bSC=144	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2490,190,0:0,0:0,0:0,0:40,23:0:38.84:0;1/1:34:99:1301,99,0:0,0:0,0:0,0:23,11:0:37.00:0	-
11_55702961_C/T	11	55702961	T	ENSG00000167825	ENST00000301532	Transcript	NON_SYNONYMOUS_CODING	916	916	306	V/I	Gtt/Att	-	ENSP=ENSP00000301532;PolyPhen=benign(0.001);SIFT=tolerated(0.51);HGNC=OR5I1	C	T/T,T/T	C	C	-	N/N,N/N	rs9665861	0.96	.	3.09	.	.	145	0.5	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;CAnc=C;DP=97;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=C;GRP=3.09;HRun=3;HaplotypeScore=0.9665;MQ=37.99;MQ0=0;Map20=0.5;QD=38.81;TS=HPG;TSseq=C,C,C;bSC=145	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2362,181,0:0,0:0,0:0,0:25,34:0:37.99:0;1/1:37:99:1470,111,0:0,0:0,0:0,0:17,20:0:37.00:0	-
11_55735649_C/A	11	55735649	A	ENSG00000174970	ENST00000312345	Transcript	NON_SYNONYMOUS_CODING	342	291	97	M/I	atG/atT	-	ENSP=ENSP00000311477;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=OR10AG1	C	A/A,A/A	C	C	-	N/N,N/N	rs61896167	0.96	.	-1.54	.	.	149	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;CAnc=C;DP=76;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=C;GRP=-1.54;HRun;HaplotypeScore=0.0000;MQ=37.48;MQ0=0;Map20=1;QD=38.32;TS=HPG;TSseq=C,C,C;bSC=149	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1642,126,0:30,12:0,0:0,0:0,0:0:37.48:0;1/1:34:99:1328,102,0:21,13:0,0:0,0:0,0:0:37.00:0	-
11_55735848_A/G	11	55735848	G	ENSG00000174970	ENST00000312345	Transcript	NON_SYNONYMOUS_CODING	143	92	31	M/T	aTg/aCg	-	ENSP=ENSP00000311477;PolyPhen=benign(0.004);SIFT=tolerated(0.48);HGNC=OR10AG1	A	G/G,G/G	A	A	-	N/N,N/N	rs75026138	0.96	.	5.27	.	.	149	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;BaseQRankSum=-1.079;CAnc=A;DP=75;Dels=0.00;EUR_AF=0.09;FS=3.819;GAnc=A;GRP=5.27;HRun=0;HaplotypeScore=5.9905;MQ=37.56;MQ0=0;MQRankSum=0.294;Map20=1;QD=36.75;ReadPosRankSum=-0.948;TS=HPG;TSseq=A,A,A;bSC=149	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1981,119,0:0,1:0,0:31,21:0,0:0:37.56:0;1/1:22:63.20:818,63,0:0,0:0,0:16,6:0,0:0:37.00:0	-
11_55761281_G/A	11	55761281	A	ENSG00000149133	ENST00000278409	Transcript	NON_SYNONYMOUS_CODING	821	821	274	A/V	gCt/gTt	-	ENSP=ENSP00000278409;PolyPhen=benign(0.013);SIFT=tolerated(0.84);HGNC=OR5F1	G	A/A,A/A	G	G	-	N/N,N/N	rs80272096	0.96	.	0.943	.	.	154	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;CAnc=G;DP=92;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=G;GRP=0.943;HRun=2;HaplotypeScore=0.0000;MQ=37.67;MQ0;Map20=1;QD=38.65;TS=HPGMC;TSseq=G,G,G,G,G;bSC=154	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:62:99:2430,184,0:29,33:0,0:0,0:0,0:0:37.67:1;1/1:30:90.28:1166,90,0:17,13:0,0:0,0:0,0:0:36.62:0	-
11_55798823_A/G	11	55798823	G	ENSG00000181785	ENST00000313555	Transcript	NON_SYNONYMOUS_CODING	929	929	310	Y/C	tAt/tGt	-	ENSP=ENSP00000324111;PolyPhen=benign(0);SIFT=tolerated(0.09);HGNC=OR5AS1	A	G/G,G/G	A	A	-	N/N,N/N	rs17600939	0.96	.	-6.67	.	.	155	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.03;AN=4;CAnc=A;DP=84;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=A;GRP=-6.67;HRun=0;HaplotypeScore=0.0000;MQ=38.06;MQ0=0;Map20=1;QD=39.41;TS=HPGMC;TSseq=A,A,A,T,T;bSC=155	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2240,169,0:0,0:0,0:34,22:0,0:0:38.06:0;1/1:28:84.27:1103,84,0:0,0:0,0:21,7:0,0:0:37.00:0	+
11_55999737_G/C	11	55999737	C	ENSG00000181718	ENST00000313264	Transcript	NON_SYNONYMOUS_CODING	1001	925	309	H/D	Cat/Gat	-	ENSP=ENSP00000323688;PolyPhen=possibly_damaging(0.562);SIFT=deleterious(0.03);HGNC=OR5T2	G	C/C,C/C	G	G	-	N/N,N/N	rs7121880	0.94	.	4.08	.	.	161	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.08;AMR_AF=0.05;AN=4;BaseQRankSum=-1.632;CAnc=G;DP=109;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=G;GRP=4.08;HRun=0;HaplotypeScore=3.9717;MQ=38.04;MQ0=0;MQRankSum=1.080;Map20=1;QD=35.97;ReadPosRankSum=-1.230;TS=HPGC;TSseq=G,G,G,G;UR;bSC=161	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:71:99:2587,168,0:0,0:30,37:0,1:1,0:0:38.04:0;1/1:38:99:1466,111,0:0,0:19,18:0,0:0,1:0:36.70:0	-
11_56058474_T/A	11	56058474	A	ENSG00000181693	ENST00000313022	Transcript	NON_SYNONYMOUS_CODING	93	65	22	E/V	gAg/gTg	-	ENSP=ENSP00000323595;PolyPhen=possibly_damaging(0.548);SIFT=deleterious(0);HGNC=OR8H1	T	A/A,A/A	T	T	-	N/N,N/N	rs17540861	0.96	.	-0.0985	.	.	155	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.04;AN=4;CAnc=T;DP=86;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=T;GRP=-0.0985;HRun=0;HaplotypeScore=1.9913;MQ=37.81;MQ0=0;Map20=1;QD=34.08;TS=HPGC;TSseq=T,T,T,T;UR;bSC=155	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1601,126,0:23,21:0,0:0,0:0,0:0:37.81:0;1/1:40:99:1504,120,0:19,21:0,0:0,0:0,0:0:36.14:0	-
11_56113764_G/A	11	56113764	A	ENSG00000150261	ENST00000279783	Transcript	NON_SYNONYMOUS_CODING	344	250	84	A/T	Gcc/Acc	-	ENSP=ENSP00000279783;PolyPhen=benign(0.002);SIFT=tolerated(0.33);HGNC=OR8K1	G	A/A,A/A	G	G	-	N/N,N/N	rs17614327	0.96	.	4.02	.	.	150	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.04;AN=4;CAnc=G;DP=81;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=G;GRP=4.02;HRun=0;HaplotypeScore=1.9995;MQ=38.24;MQ0=0;Map20=1;QD=37.10;TS=HPGC;TSseq=G,G,G,G;bSC=150	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1814,141,0:34,14:0,0:0,0:0,0:0:38.24:0;1/1:33:99:1317,99,0:16,17:0,0:0,0:0,0:0:37.00:0	+
11_56309896_C/G	11	56309896	G	ENSG00000255223	ENST00000528616	Transcript	NON_SYNONYMOUS_CODING	862	838	280	V/L	Gtg/Ctg	-	ENSP=ENSP00000432417;PolyPhen=benign(0.078);SIFT=tolerated(0.13);HGNC=OR5M11	C	G/G,G/G	C	C	-	N/N,N/N	rs17547207	0.96	.	1.96	.	.	189	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.04;AN=4;BaseQRankSum=0.773;CAnc=C;DP=102;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=C;GRP=1.96;HRun=0;HaplotypeScore=3.9989;MQ=37.46;MQ0=0;MQRankSum=-0.187;Map20=1;QD=37.94;ReadPosRankSum=0.773;TS=HPGC;TSseq=C,C,C,C;bSC=189	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2499,156,0:0,0:1,0:37,27:0,0:0:37.46:0;1/1:37:99:1468,111,0:0,0:0,0:21,16:0,0:0:37.00:0	-
11_56310356_A/T	11	56310356	T	ENSG00000255223	ENST00000528616	Transcript	STOP_GAINED	402	378	126	Y/*	taT/taA	-	ENSP=ENSP00000432417;HGNC=OR5M11	A	T/T,T/T	A	A	-	N/N,N/N	rs17547284	0.96	.	-0.628	.	.	189	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.04;AN=4;CAnc=A;DP=79;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=A;GRP=-0.628;HRun;HaplotypeScore=0.0000;MQ=38.77;MQ0=0;Map20=1;QD=35.83;TS=HPGC;TSseq=A,A,A,A;bSC=189	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1824,138,0:0,1:0,0:0,0:29,20:0:38.77:0;1/1:29:87.28:1150,87,0:0,0:0,0:0,0:13,16:0:37.00:0	-
11_59568355_G/A	11	59568355	A	ENSG00000166900	ENST00000437946	Transcript	NON_SYNONYMOUS_CODING	944	523	175	A/T	Gcc/Acc	-	ENSP=ENSP00000393536;PolyPhen=benign(0);SIFT=tolerated(0.32);HGNC=STX3	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	0.59	0.671	0.911	335	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.604;CAnc=G;DP=72;Dels=0.00;FS=4.472;GAnc=G;GRP=0.59;HRun=0;HaplotypeScore=0.9997;MQ=37.69;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=G;QD=35.96;ReadPosRankSum=-1.491;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=335;mSC=0.671;pSC=0.911	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:84.67:1579,85,0:14,28:0,0:1,0:0,0:0:37.69:0;1/1:29:84.27:1093,84,0:17,11:0,0:0,0:0,1:0:37.00:0	+
11_61252200_A/G	11	61252200	G	ENSG00000162148	ENST00000338608	Transcript	NON_SYNONYMOUS_CODING	547	422	141	Q/R	cAg/cGg	-	ENSP=ENSP00000344140;PolyPhen=benign(0.208);SIFT=tolerated(0.21);HGNC=PPP1R32	A	G/G,G/G	A	A	A	N/N,N/N	rs146231065	1.0	.	5.33	0.466	0.567	419	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-0.825;CAnc=A;DP=63;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=5.33;HRun=2;HaplotypeScore=0.9916;MQ=37.46;MQ0=0;MQRankSum=-1.403;Map20=1;OAnc=A;QD=34.49;ReadPosRankSum=1.155;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=419;mSC=0.466;pSC=0.567	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:83.38:1516,83,0:0,1:0,0:17,24:0,0:0:37.46:0;1/1:20:60.19:791,60,0:0,0:0,0:9,11:0,0:0:37.00:0	+
11_61253841_C/A	11	61253841	A	ENSG00000162148	ENST00000338608	Transcript	NON_SYNONYMOUS_CODING	838	713	238	T/N	aCc/aAc	-	ENSP=ENSP00000344140;PolyPhen=probably_damaging(0.952);SIFT=deleterious(0.03);HGNC=PPP1R32	C	A/A,A/A	C	C	C	N/N,N/N	rs11230707	0.96	.	3.39	1.000	0.882	434	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;CAnc=C;DP=64;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=3.39;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=36.06;TS=HPGOMC;TSseq=C,C,C,C,-,C;bSC=434;mSC=1.000;pSC=0.882	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1367,105,0:19,17:0,0:0,0:0,0:0:37.81:0;1/1:27:81.26:1050,81,0:15,12:0,0:0,0:0,0:0:37.00:0	+
11_62381106_G/C	11	62381106	C	ENSG00000149489	ENST00000278833	Transcript	NON_SYNONYMOUS_CODING	894	353	118	A/G	gCc/gGc	-	ENSP=ENSP00000278833;PolyPhen=benign(0.004);SIFT=tolerated(1);HGNC=ROM1	C	G/G,G/G	C	C	C	N/N,N/N	rs1799959	0.93	.	3.72	0.813	0.121	187	1	1000gALT=C;AC=0;AF=0.00;AF1000g=0.93;AFR_AF=0.74;AMR_AF=0.97;AN=4;ASN_AF=1.00;CAnc=C;DP=45;EUR_AF=0.99;GAnc=C;GRP=3.72;MQ=37.99;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,-,C,C,C;bSC=187;mSC=0.813;pSC=0.121	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:30:90.28:0,90,1162:0,0:0,0:14,15:0,0:0:37.99:0;0/0:15:45.13:0,45,584:0,0:0,0:8,7:0,0:0:37.00:0	+
11_64068421_A/G	11	64068421	G	ENSG00000219435	ENST00000328404	Transcript	NON_SYNONYMOUS_CODING	334	314	105	N/S	aAt/aGt	-	ENSP=ENSP00000330877;PolyPhen=benign(0.151);SIFT=tolerated(0.59);HGNC=C11orf20	A	G/G,G/G	A	A	A	N/N,N/N	rs150476596	1.0	.	-8.46	0.000	0.420	360	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=A;DP=65;Dels=0.00;FS=0.000;GAnc=A;GRP=-8.46;HRun=0;HaplotypeScore=0.9987;MQ=37.62;MQ0=0;Map20=1;OAnc=A;QD=38.93;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=360;mSC=0.000;pSC=0.420	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1901,144,0:0,0:0,0:25,22:0,0:0:37.62:0;1/1:17:51.17:674,51,0:0,0:0,0:7,10:0,0:0:37.00:0	+
11_64514804_C/T	11	64514804	T	ENSG00000068976	ENST00000164139	Transcript	NON_SYNONYMOUS_CODING	2603	2204	735	R/H	cGc/cAc	-	ENSP=ENSP00000164139;PolyPhen=benign(0.009);SIFT=tolerated(0.19);HGNC=PYGM	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	4.52	0.000	0.671	356	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=80;Dels=0.00;FS=0.000;GAnc=C;GRP=4.52;HRun=0;HaplotypeScore=0.0000;MQ=38.27;MQ0=0;Map20=1;OAnc=C;QD=37.11;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=356;mSC=0.000;pSC=0.671	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1480,114,0:0,0:0,0:0,0:21,17:0:38.27:0;1/1:41:99:1601,123,0:0,0:0,0:0,0:23,18:0:37.00:0	-
11_64884728_C/T	11	64884728	T	ENSG00000174276	ENST00000310597	Transcript	NON_SYNONYMOUS_CODING	443	398	133	R/H	cGc/cAc	-	ENSP=ENSP00000308548;PolyPhen=benign(0.348);SIFT=tolerated(0.12);HGNC=ZNHIT2	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	4.55	0.060	0.144	241	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=39;Dels=0.00;FS=0.000;GAnc=C;GRP=4.55;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.52;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=241;mSC=0.060;pSC=0.144	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:26:78.26:1035,78,0:0,0:0,0:0,0:12,14:0:37.00:0;1/1:13:39.13:520,39,0:0,0:0,0:0,0:6,7:0:37.00:0	-
11_66359522_G/A	11	66359522	A	ENSG00000182791	ENST00000333861	Transcript	NON_SYNONYMOUS_CODING	1033	965	322	A/V	gCa/gTa	-	ENSP=ENSP00000328487;PolyPhen=possibly_damaging(0.834);SIFT=deleterious(0.03);HGNC=CCDC87	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	5.12	0.999	0.801	62	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.578;CAnc=G;DP=49;Dels=0.00;FS=0.000;GAnc=G;GRP=5.12;HRun=0;HaplotypeScore=0.9997;MQ=38.96;MQ0=0;MQRankSum=-0.924;Map20=1;OAnc=G;QD=35.44;ReadPosRankSum=-1.617;TS=HPGOMC;TSseq=G,G,G,G,G,N;UR;bSC=62;mSC=0.999;pSC=0.801	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:50.28:1096,50,0:16,13:0,0:1,0:0,0:0:38.96:0;1/1:19:57.19:760,57,0:7,12:0,0:0,0:0,0:0:37.00:0	-
11_66617920_C/T	11	66617920	T	ENSG00000173599	ENST00000393955	Transcript	NON_SYNONYMOUS_CODING	2570	2489	830	R/H	cGc/cAc	-	ENSP=ENSP00000377527;PolyPhen=benign(0.176);SIFT=tolerated(0.55);HGNC=PC	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	4.69	0.986	0.365	75	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=53;Dels=0.00;FS=0.000;GAnc=C;GRP=4.69;HRun=0;HaplotypeScore=0.0000;MQ=37.88;MQ0=0;Map20=1;OAnc=C;QD=36.81;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=75;mSC=0.986;pSC=0.365	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1284,99,0:0,0:0,0:0,0:22,11:0:37.88:0;1/1:19:57.17:721,57,0:0,0:0,0:0,0:5,14:0:37.00:0	-
11_72492213_G/A	11	72492213	A	ENSG00000214530	ENST00000334805	Transcript	NON_SYNONYMOUS_CODING	934	14	5	A/V	gCg/gTg	-	ENSP=ENSP00000335247;PolyPhen=benign(0.091);SIFT=tolerated(0.19);HGNC=STARD10	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	4.42	0.062	0.805	590	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.225;CAnc=G;CpG;DP=60;Dels=0.00;FS=0.000;GAnc=G;GRP=4.42;HRun=0;HaplotypeScore=0.9997;MQ=37.73;MQ0=0;MQRankSum=0.718;Map20=1;OAnc=G;QD=35.86;ReadPosRankSum=1.395;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=590;mSC=0.062;pSC=0.805	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:80.38:1503,80,0:20,20:0,0:1,0:0,0:0:37.73:0;1/1:19:54.17:697,54,0:9,10:0,0:0,0:0,0:0:37.00:0	-
11_92526021_C/G	11	92526021	G	ENSG00000165323	ENST00000298047	Transcript	NON_SYNONYMOUS_CODING	4717	4700	1567	T/S	aCc/aGc	-	ENSP=ENSP00000298047;PolyPhen=possibly_damaging(0.553);SIFT=tolerated(0.1);HGNC=FAT3	C	G/G,G/G	C	C	C	N/N,N/N	rs192482905	1.0	.	5.74	0.210	0.929	637	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-1.330;CAnc=C;DP=80;Dels=0.00;FS=3.112;GAnc=C;GRP=5.74;HRun=0;HaplotypeScore=0.0000;MQ=39.05;MQ0=0;MQRankSum=-1.491;Map20=1;OAnc=C;QD=37.03;ReadPosRankSum=0.363;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=637;mSC=0.210;pSC=0.929	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:89.41:1625,89,0:0,0:1,0:20,22:0,0:0:39.05:0;1/1:37:99:1397,108,0:0,0:0,0:19,18:0,0:0:37.00:0	+
11_104874041_C/T	11	104874041	T	ENSG00000137757	ENST00000260315	Transcript	NON_SYNONYMOUS_CODING	503	503	168	R/H	cGt/cAt	-	ENSP=ENSP00000260315;PolyPhen=benign(0.001);SIFT=tolerated(0.6);HGNC=CASP5	C	T/T,T/T	C	C	C	N/N,N/N	rs3181179	0.98	CpG	-8.38	0.300	.	906	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AN=4;CAnc=C;CpG;DP=110;Dels=0.00;FS=0.000;GAnc=C;GRP=-8.38;HRun=0;HaplotypeScore=0.9997;MQ=39.25;MQ0=0;Map20=1;OAnc=C;QD=36.66;TS=HPGO;TSseq=C,C,C,C;bSC=906;mSC=0.300	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2416,187,0:0,0:0,0:0,0:22,42:0:39.25:0;1/1:45:99:1794,135,0:0,0:0,0:0,0:20,25:0:37.00:0	-
11_108122592_C/G	11	108122592	G	ENSG00000149311	ENST00000278616	Transcript	NON_SYNONYMOUS_CODING	2021	1636	546	L/V	Ctg/Gtg	-	ENSP=ENSP00000278616;PolyPhen=benign(0.131);SIFT=deleterious(0.01);HGNC=ATM	C	G/G,G/G	C	C	C	N/N,N/N	rs2227924	0.99	.	-1.48	0.120	0.569	117	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.06;AMR_AF=0.01;AN=4;BaseQRankSum=-0.102;CAnc=C;DP=74;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.48;HRun=0;HaplotypeScore=0.9997;MQ=38.16;MQ0=0;MQRankSum=1.529;Map20=1;OAnc=C;QD=36.44;ReadPosRankSum=1.393;TS=HPGOM;TSseq=C,C,C,C,C;UR;bSC=117;mSC=0.120;pSC=0.569	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1891,113,0:0,0:0,1:23,27:0,0:0:38.16:0;1/1:23:69.23:919,69,0:0,0:0,0:11,12:0,0:0:37.00:0	+
11_111753246_G/A	11	111753246	A	ENSG00000137720	ENST00000260276	Transcript	NON_SYNONYMOUS_CODING	537	200	67	R/H	cGt/cAt	-	ENSP=ENSP00000260276;PolyPhen=benign(0.006);SIFT=tolerated(0.08);HGNC=C11orf1	G	A/A,A/A	G	G	G	N/N,N/N	rs117090799	1.0	CpG	0.171	0.013	0.840	101	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.02;AN=4;CAnc=G;CpG;DP=74;Dels=0.00;FS=0.000;GAnc=G;GRP=0.171;HRun=0;HaplotypeScore=0.0000;MQ=38.73;MQ0=0;Map20=1;OAnc=G;QD=36.75;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=101;mSC=0.013;pSC=0.840	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1907,144,0:29,21:0,0:0,0:0,0:0:38.73:0;1/1:23:69.23:920,69,0:14,9:0,0:0,0:0,0:0:37.00:0	+
11_111899635_A/G	11	111899635	G	ENSG00000150768	ENST00000280346	Transcript	NON_SYNONYMOUS_CODING	1285	626	209	Q/R	cAg/cGg	-	ENSP=ENSP00000280346;PolyPhen=benign(0.002);SIFT=tolerated(0.37);HGNC=DLAT	A	G/G,G/G	A	A	A	N/N,N/N	rs11553595	0.97	.	4.43	0.001	0.715	87	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.11;AMR_AF=0.02;AN=4;BaseQRankSum=-1.271;CAnc=A;DP=60;Dels=0.00;FS=0.000;GAnc=A;GRP=4.43;HRun=2;HaplotypeScore=0.0000;MQ=37.99;MQ0=0;MQRankSum=-1.386;Map20=1;OAnc=A;QD=35.89;ReadPosRankSum=-1.155;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=87;mSC=0.001;pSC=0.715	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:50.29:1110,50,0:0,1:0,0:12,17:0,0:0:37.99:0;1/1:30:50.27:1094,50,0:0,1:0,0:16,13:0,0:0:37.00:0	+
11_117279712_C/T	11	117279712	T	ENSG00000110274	ENST00000278935	Transcript	NON_SYNONYMOUS_CODING	3863	3716	1239	P/L	cCg/cTg	-	ENSP=ENSP00000278935;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=CEP164	C	T/T,T/T	C	C	T	N/N,N/N	rs61995733	0.99	CpG	-0.576	0.000	0.157	647	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=78;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.576;HRun=0;HaplotypeScore=1.9976;MQ=38.10;MQ0=0;Map20=1;OAnc=T;QD=38.94;TS=HPGOMC;TSseq=C,C,C,T,T,T;bSC=647;mSC=0.000;pSC=0.157	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2136,163,0:0,0:0,0:0,0:21,33:0:38.10:0;1/1:24:72.24:951,72,0:0,0:0,0:0,0:14,10:0:37.00:0	+
11_119044199_C/T	11	119044199	T	ENSG00000160703	ENST00000292199	Transcript	NON_SYNONYMOUS_CODING	482	241	81	R/W	Cgg/Tgg	-	ENSP=ENSP00000292199;PolyPhen=benign(0.3);SIFT=deleterious(0.02);HGNC=NLRX1	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	2.55	.	0.007	241	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=75;Dels=0.00;FS=0.000;GAnc=C;GRP=2.55;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.12;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=241;pSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1666,129,0:0,0:0,0:0,0:25,19:0:37.00:0;1/1:31:93.26:1169,93,0:0,0:0,0:0,0:11,20:0:37.00:0	+
11_119058712_C/T	11	119058712	T	ENSG00000172367	ENST00000322712	Transcript	NON_SYNONYMOUS_CODING	688	679	227	R/C	Cgc/Tgc	-	ENSP=ENSP00000327107;PolyPhen=possibly_damaging(0.718);SIFT=deleterious(0.01);HGNC=PDZD3	C	T/T,T/T	C	-	C	N/N,N/N	rs147651078	1.0	CpG	4.51	.	0.965	225	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=59;Dels=0.00;FS=0.000;GRP=4.51;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.48;TS=HPOMC;TSseq=C,C,C,C,C;UR;bSC=225;pSC=0.965	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1341,102,0:0,0:0,0:0,0:14,20:0:37.00:0;1/1:25:75.23:974,75,0:0,0:0,0:0,0:14,11:0:37.00:0	+
11_119058835_G/C	11	119058835	C	ENSG00000172367	ENST00000322712	Transcript	NON_SYNONYMOUS_CODING	811	802	268	G/R	Ggc/Cgc	-	ENSP=ENSP00000327107;PolyPhen=benign(0.194);SIFT=tolerated(0.14);HGNC=PDZD3	G	C/C,C/C	G	-	G	N/N,N/N	.	1.0	.	4.45	.	0.219	225	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=G;DP=54;Dels=0.00;FS=0.000;GRP=4.45;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.27;TS=HPOMC;TSseq=G,G,G,G,N;UR;bSC=225;pSC=0.219	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.31:1258,96,0:0,0:14,18:0,0:0,0:0:37.00:0;1/1:22:63.21:840,63,0:0,0:13,9:0,0:0,0:0:37.00:0	+
11_119206824_C/T	11	119206824	T	ENSG00000173456	ENST00000311413	Transcript	NON_SYNONYMOUS_CODING	1588	992	331	A/V	gCg/gTg	-	ENSP=ENSP00000312439;PolyPhen=benign(0.227);SIFT=tolerated(0.18);HGNC=RNF26	C	T/T,T/T	C	C	C	N/N,N/N	rs189783368	1.0	CpG	2.99	0.009	0.349	353	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=2.99;HRun=0;HaplotypeScore=0.9997;MQ=37.61;MQ0=0;Map20=1;OAnc=C;QD=38.11;TS=HPGOMC;TSseq=C,C,T,C,C,C;UR;bSC=353;mSC=0.009;pSC=0.349	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1900,144,0:0,0:0,0:0,0:24,25:0:37.61:0;1/1:21:63.21:834,63,0:0,0:0,0:0,0:10,11:0:37.00:0	+
11_119986119_T/C	11	119986119	C	ENSG00000137699	ENST00000341846	Transcript	NON_SYNONYMOUS_CODING	2053	1631	544	Y/C	tAt/tGt	-	ENSP=ENSP00000343129;PolyPhen=possibly_damaging(0.87);SIFT=deleterious(0);HGNC=TRIM29	T	C/C,C/C	T	T	T	N/N,N/N	rs11604169	0.96	.	2.67	0.000	0.531	870	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.04;AN=4;ASN_AF=0.11;CAnc=T;DP=63;Dels=0.00;FS=0.000;GAnc=T;GRP=2.67;HRun=0;HaplotypeScore=2.9520;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=37.77;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=870;mSC=0.000;pSC=0.531	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1619,123,0:0,0:18,24:0,0:0,0:0:37.00:0;1/1:21:63.20:821,63,0:0,0:11,10:0,0:0,0:0:37.00:0	-
11_120980076_C/A	11	120980076	A	ENSG00000109927	ENST00000264037	Transcript	NON_SYNONYMOUS_CODING	355	355	119	P/T	Cct/Act	-	ENSP=ENSP00000264037;PolyPhen=benign(0.166);SIFT=tolerated(0.22);HGNC=TECTA	C	A/A,A/A	C	C	C	N/N,N/N	.	1	.	4.65	0.002	0.881	694	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.803;CAnc=C;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=4.65;HRun=0;HaplotypeScore=0.9947;MQ=37.49;MQ0=0;MQRankSum=-1.310;Map20=1;OAnc=C;QD=36.25;ReadPosRankSum=-1.648;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=694;mSC=0.002;pSC=0.881	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:83.38:1519,83,0:21,18:1,0:0,0:0,0:0:37.49:0;1/1:29:87.28:1147,87,0:18,11:0,0:0,0:0,0:0:37.00:0	+
11_123989348_A/G	11	123989348	G	ENSG00000110002	ENST00000360334	Transcript	NON_SYNONYMOUS_CODING	787	578	193	E/G	gAg/gGg	-	ENSP=ENSP00000353485;PolyPhen=benign(0.185);SIFT=tolerated(0.07);HGNC=VWA5A	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	3.3	0.028	0.927	834	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=69;Dels=0.00;FS=0.000;GAnc=A;GRP=3.3;HRun;HaplotypeScore=0.0000;MQ=37.73;MQ0=0;Map20=1;OAnc=A;QD=38.41;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=834;mSC=0.028;pSC=0.927	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1608,123,0:0,0:0,0:19,22:0,0:0:37.73:0;1/1:28:84.25:1068,84,0:0,0:0,0:14,14:0,0:0:37.00:0	+
11_123989362_A/G	11	123989362	G	ENSG00000110002	ENST00000360334	Transcript	NON_SYNONYMOUS_CODING	801	592	198	N/D	Aac/Gac	-	ENSP=ENSP00000353485;PolyPhen=possibly_damaging(0.899);SIFT=deleterious(0.02);HGNC=VWA5A	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	5.6	0.995	0.911	834	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.945;CAnc=A;DP=70;Dels=0.00;FS=0.000;GAnc=A;GRP=5.6;HRun=0;HaplotypeScore=2.7334;MQ=38.35;MQ0=0;MQRankSum=1.417;Map20=1;OAnc=A;QD=35.66;ReadPosRankSum=-0.315;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=834;mSC=0.995;pSC=0.911	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:89.41:1602,89,0:0,1:0,0:17,26:0,0:0:38.35:0;1/1:26:78.24:1015,78,0:0,0:0,0:12,14:0,0:0:37.00:0	+
11_123994464_C/T	11	123994464	T	ENSG00000110002	ENST00000360334	Transcript	NON_SYNONYMOUS_CODING	1326	1117	373	L/F	Ctc/Ttc	-	ENSP=ENSP00000353485;PolyPhen=benign(0.22);SIFT=deleterious(0.02);HGNC=VWA5A	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	4.72	0.000	0.196	812	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=50;Dels=0.00;FS=0.000;GAnc=C;GRP=4.72;HRun;HaplotypeScore=0.0000;MQ=38.78;MQ0=0;Map20=1;OAnc=C;QD=38.03;TS=HPGOMC;TSseq=C,C,C,C,C,A;UR;bSC=812;mSC=0.000;pSC=0.196	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1288,99,0:0,0:0,0:0,0:16,17:0:38.78:0;1/1:17:51.17:680,51,0:0,0:0,0:0,0:9,8:0:37.00:0	+
11_124412838_C/T	11	124412838	T	ENSG00000170953	ENST00000306842	Transcript	NON_SYNONYMOUS_CODING	738	713	238	S/N	aGt/aAt	-	ENSP=ENSP00000307159;PolyPhen=benign(0.356);SIFT=tolerated(0.06);HGNC=OR8B12	C	T/T,T/T	C	C	C	N/N,N/N	rs61747005	0.96	.	3.89	0.174	0.225	779	0.5	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.08;AMR_AF=0.02;AN=4;ASN_AF=0.02;CAnc=C;DP=80;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=3.89;HRun;HaplotypeScore=3.9782;MQ=38.57;MQ0=0;Map20=0.5;OAnc=C;QD=38.50;TS=HPGOM;TSseq=C,C,C,C,C;UR;bSC=779;mSC=0.174;pSC=0.225	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1958,150,0:0,0:0,0:0,0:24,25:0:38.57:0;1/1:30:90.28:1172,90,0:0,0:0,0:0,0:23,7:0:37.00:0	-
11_126432775_C/T	11	126432775	T	ENSG00000149571	ENST00000525144	Transcript	NON_SYNONYMOUS_CODING	338	88	30	V/M	Gtg/Atg	-	ENSP=ENSP00000435466;PolyPhen=benign(0.33);SIFT=deleterious(0.01);HGNC=KIRREL3	C	T/T,T/T	C	C	C	N/N,N/N	rs182260035	1.0	.	5.62	0.001	0.984	949	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;DP=78;Dels=0.00;FS=0.000;GAnc=C;GRP=5.62;HRun=0;HaplotypeScore=0.0000;MQ=39.38;MQ0=0;Map20=1;OAnc=C;QD=36.91;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=949;mSC=0.001;pSC=0.984	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1842,141,0:0,0:0,0:0,0:25,24:0:39.38:0;1/1:29:87.28:1142,87,0:0,0:0,0:0,0:12,17:0:37.00:0	-
11_134055353_T/A	11	134055353	A	ENSG00000151503	ENST00000534548	Transcript	NON_SYNONYMOUS_CODING	2179	2114	705	N/I	aAt/aTt	-	ENSP=ENSP00000433681;PolyPhen=possibly_damaging(0.473);SIFT=deleterious(0.03);HGNC=NCAPD3	T	A/A,A/A	T	T	T	N/N,N/N	.	1	.	4.82	0.000	0.461	442	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=105;Dels=0.00;FS=0.000;GAnc=T;GRP=4.82;HRun;HaplotypeScore=0.0000;MQ=38.31;MQ0=0;Map20=1;OAnc=T;QD=37.70;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=442;mSC=0.000;pSC=0.461	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2597,202,0:29,39:0,0:0,0:0,0:0:38.31:0;1/1:37:99:1448,111,0:15,22:0,0:0,0:0,0:0:37.00:0	-
11_134183303_T/C	11	134183303	C	ENSG00000166105	ENST00000431683	Transcript	NON_SYNONYMOUS_CODING	1514	1514	505	L/P	cTg/cCg	-	ENSP=ENSP00000396615;PolyPhen=probably_damaging(0.993);SIFT=deleterious(0);HGNC=GLB1L3	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	4.52	0.221	0.878	763	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=76;Dels=0.00;FS=0.000;GAnc=T;GRP=4.52;HRun=2;HaplotypeScore=3.9325;MQ=37.56;MQ0=0;Map20=1;OAnc=T;QD=38.21;TS=HPGOMC;TSseq=T,T,T,T,-,T;bSC=763;mSC=0.221;pSC=0.878	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2058,157,0:0,0:27,26:0,0:0,0:0:37.56:0;1/1:23:69.22:908,69,0:0,0:12,11:0,0:0,0:0:37.00:0	+
12_1910786_C/T	12	1910786	T	ENSG00000151062	ENST00000280663	Transcript	NON_SYNONYMOUS_CODING	2939	2746	916	D/N	Gat/Aat	-	ENSP=ENSP00000280663;PolyPhen=possibly_damaging(0.508);SIFT=tolerated(0.44);HGNC=CACNA2D4	C	T/T,T/T	C	C	C	N/N,N/N	rs62621429	0.98	.	4.69	0.989	0.666	819	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.03;AN=4;CAnc=C;DP=70;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=4.69;HRun;HaplotypeScore=1.9454;MQ=37.73;MQ0=0;Map20=1;OAnc=C;QD=37.55;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=819;mSC=0.989;pSC=0.666	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1573,120,0:0,0:0,0:0,0:19,22:0:37.73:0;1/1:29:87.27:1137,87,0:0,0:0,0:0,0:10,19:0:37.00:0	-
12_7285527_T/C	12	7285527	C	ENSG00000139182	ENST00000537408	Transcript	NON_SYNONYMOUS_CODING	546	8	3	L/P	cTg/cCg	-	ENSP=ENSP00000440679;PolyPhen=possibly_damaging(0.823);SIFT=tolerated(0.1);HGNC=CLSTN3	T	C/C,C/C	T	T	T	N/N,N/N	rs61741630	0.98	.	.	.	.	.	.	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.02;AN=4;ASN_AF=0.01;BaseQRankSum=1.660;CAnc=T;DP=72;Dels=0.00;FS=0.000;GAnc=T;HRun;HaplotypeScore=0.0000;MQ=36.79;MQ0=0;MQRankSum=1.588;OAnc=T;QD=37.62;ReadPosRankSum=0.361;TS=HPGOMC;TSseq=T,-,T,T,T,C	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1839,141,0:0,0:24,23:0,0:1,0:0:36.79:0;1/1:24:72.23:935,72,0:0,0:15,9:0,0:0,0:0:37.00:0	+
12_9016456_C/T	12	9016456	T	ENSG00000166535	ENST00000299698	Transcript	NON_SYNONYMOUS_CODING	3749	3569	1190	A/V	gCg/gTg	-	ENSP=ENSP00000299698;PolyPhen=benign(0.118);SIFT=tolerated(0.36);HGNC=A2ML1	C	T/T,T/T	C	C	C	N/N,N/N	rs73040625	0.97	CpG	-1.35	0.000	0.318	819	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.05;AN=4;CAnc=C;CpG;DP=75;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=C;GRP=-1.35;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.87;TS=HPGOMC;TSseq=C,C,C,C,T,C;bSC=819;mSC=0.000;pSC=0.318	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1766,135,0:0,0:0,0:0,0:21,25:0:37.00:0;1/1:28:84.27:1096,84,0:0,0:0,0:0,0:17,11:0:37.00:0	+
12_11244230_C/A	12	11244230	A	ENSG00000255374	ENST00000531678	Transcript	NON_SYNONYMOUS_CODING	683	599	200	C/F	tGt/tTt	-	ENSP=ENSP00000431719;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=TAS2R43	C	A/A,A/A	C	C	C	N/N,N/N	rs144622176	0.98	.	0.685	.	.	970	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.01;AN=4;BaseQRankSum=2.057;CAnc=C;DP=102;Dels=0.01;EUR_AF=0.03;FS=9.037;GAnc=C;GRP=0.685;HRun=2;HaplotypeScore=6.9744;MQ=34.96;MQ0;MQRankSum=1.592;Map20=1;OAnc=C;QD=34.56;ReadPosRankSum=2.164;TS=HPGO;TSseq=C,C,C,-;bSC=970	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:70:99:2452,148,0:45,21:0,2:0,0:0,0:0:34.96:1;1/1:31:93.21:1128,93,0:19,12:0,0:0,0:0,0:0:33.84:0	-
12_11244319_A/C	12	11244319	C	ENSG00000255374	ENST00000531678	Transcript	NON_SYNONYMOUS_CODING	594	510	170	S/R	agT/agG	-	ENSP=ENSP00000431719;PolyPhen=benign(0.003);SIFT=tolerated(0.09);HGNC=TAS2R43	A	C/C,C/C	A	A	A	N/N,N/N	rs116243872	0.98	.	-4.03	.	.	970	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.01;AN=4;BaseQRankSum=1.069;CAnc=A;DP=76;Dels=0.00;EUR_AF=0.03;FS=3.499;GAnc=A;GRP=-4.03;HRun;HaplotypeScore=1.9916;MQ=37.43;MQ0;MQRankSum=1.659;Map20=1;OAnc=A;QD=37.01;ReadPosRankSum=1.659;TS=HPGO;TSseq=A,A,A,-;bSC=970	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1772,112,0:1,0:20,26:0,0:0,0:0:37.43:0;1/1:29:84.27:1114,84,0:0,1:11,17:0,0:0,0:0:36.36:1	-
12_11463280_C/G	12	11463280	G	ENSG00000230657	ENST00000279575	Transcript	NON_SYNONYMOUS_CODING	87	53	18	S/T	aGt/aCt	-	ENSP=ENSP00000279575;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=PRB4	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	-1.05	0.000	.	982	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=64;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.05;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.23;TS=HPGO;TSseq=C,C,C,C;bSC=982;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1295,99,0:0,0:0,0:18,15:0,0:0:37.00:0;1/1:31:90.27:1159,90,0:0,0:0,0:20,11:0,0:0:37.00:0	-
12_15038703_G/A	12	15038703	A	ENSG00000111341	ENST00000228938	Transcript	NON_SYNONYMOUS_CODING	89	23	8	A/V	gCc/gTc	-	ENSP=ENSP00000228938;PolyPhen=benign(0.02);SIFT=deleterious(0.04);HGNC=MGP	G	A/A,A/A	G	G	G	N/N,N/N	rs142330429	0.99	.	5.22	0.191	0.189	654	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.03;CAnc=G;DP=57;Dels=0.00;FS=0.000;GAnc=G;GRP=5.22;HRun=0;HaplotypeScore=0.9997;MQ=37.88;MQ0=0;Map20=1;OAnc=G;QD=37.28;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=654;mSC=0.191;pSC=0.189	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1300,99,0:13,21:0,0:0,0:0,0:0:37.88:0;1/1:23:69.22:906,69,0:11,12:0,0:0,0:0,0:0:37.00:0	-
12_16347327_G/A	12	16347327	A	ENSG00000188991	ENST00000344941	Transcript	NON_SYNONYMOUS_CODING	1544	1544	515	A/V	gCa/gTa	-	ENSP=ENSP00000340402;PolyPhen=possibly_damaging(0.86);SIFT=deleterious(0.01);HGNC=SLC15A5	G	A/A,A/A	G	G	G	N/N,N/N	rs117728539	1.0	.	4.46	.	0.971	821	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=G;DP=74;Dels=0.00;FS=0.000;GAnc=G;GRP=4.46;HRun=0;HaplotypeScore=0.0000;MQ=37.75;MQ0=0;Map20=1;OAnc=G;QD=36.65;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=821;pSC=0.971	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1499,114,0:19,21:0,0:0,0:0,0:0:37.75:0;1/1:34:99:1302,99,0:20,13:0,0:0,1:0,0:0:37.00:0	-
12_16425547_C/T	12	16425547	T	ENSG00000188991	ENST00000344941	Transcript	NON_SYNONYMOUS_CODING	532	532	178	A/T	Gct/Act	-	ENSP=ENSP00000340402;PolyPhen=probably_damaging(0.925);SIFT=deleterious(0.01);HGNC=SLC15A5	C	T/T,T/T	C	C	C	N/N,N/N	rs117008450	0.99	.	-0.298	0.001	0.855	953	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.04;CAnc=C;DP=77;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.298;HRun=0;HaplotypeScore=0.0000;MQ=38.32;MQ0=0;Map20=1;OAnc=C;QD=35.49;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=953;mSC=0.001;pSC=0.855	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1630,123,0:0,0:0,0:0,0:18,27:0:38.32:0;1/1:32:96.31:1275,96,0:0,0:0,0:0,0:14,18:0:37.00:0	-
12_32134926_G/A	12	32134926	A	ENSG00000174718	ENST00000312561	Transcript	NON_SYNONYMOUS_CODING	1451	1037	346	S/N	aGc/aAc	-	ENSP=ENSP00000310338;PolyPhen=benign(0.223);SIFT=tolerated(0.14);HGNC=C12orf35	G	A/A,A/A	G	G	G	N/N,N/N	rs3207618	0.94	.	-4.92	0.000	0.133	835	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.02;AMR_AF=0.06;AN=4;ASN_AF=0.04;BaseQRankSum=1.146;CAnc=G;DP=98;Dels=0.00;EUR_AF=0.09;FS=3.658;GAnc=G;GRP=-4.92;HRun;HaplotypeScore=0.0000;MQ=39.57;MQ0=0;MQRankSum=-1.519;Map20=1;OAnc=G;QD=35.30;ReadPosRankSum=-1.093;TS=HPGOM;TSseq=G,G,G,G,G;bSC=835;mSC=0.000;pSC=0.133	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:68:99:2434,148,0:37,30:0,0:0,1:0,0:0:39.57:0;1/1:30:90.30:1196,90,0:19,11:0,0:0,0:0,0:0:37.00:0	+
12_43822171_G/A	12	43822171	A	ENSG00000173157	ENST00000389417	Transcript	NON_SYNONYMOUS_CODING	3818	3818	1273	S/F	tCc/tTc	-	ENSP=ENSP00000374068;PolyPhen=possibly_damaging(0.441);SIFT=tolerated(0.74);HGNC=ADAMTS20	G	A/A,A/A	G	G	G	N/N,N/N	rs7310011	0.96	.	4.94	0.958	0.002	539	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.08;CAnc=G;DP=79;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=4.94;HRun=2;HaplotypeScore=1.5781;MQ=38.75;MQ0=0;Map20=1;OAnc=G;QD=35.72;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=539;mSC=0.958;pSC=0.002	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1640,126,0:16,29:0,0:0,0:0,0:0:38.75:0;1/1:34:99:1331,102,0:18,16:0,0:0,0:0,0:0:37.00:0	-
12_48359676_G/T	12	48359676	T	ENSG00000134291	ENST00000256686	Transcript	NON_SYNONYMOUS_CODING	385	307	103	V/F	Gtt/Ttt	-	ENSP=ENSP00000256686;PolyPhen=benign(0.012);SIFT=tolerated(0.15);HGNC=TMEM106C	G	T/T,T/T	G	G	G	N/N,N/N	rs35000511	0.96	.	3.56	1.000	0.871	461	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.02;BaseQRankSum=1.097;CAnc=G;DP=93;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=3.56;HRun=4;HaplotypeScore=0.9997;MQ=39.43;MQ0=0;MQRankSum=-0.289;Map20=1;OAnc=G;QD=37.41;ReadPosRankSum=0.346;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=461;mSC=1.000;pSC=0.871	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:60:99:2278,141,0:0,0:0,0:0,1:23,36:0:39.43:0;1/1:33:99:1293,99,0:0,0:0,0:0,0:15,18:0:37.00:0	+
12_50483727_G/A	12	50483727	A	ENSG00000066117	ENST00000381513	Transcript	NON_SYNONYMOUS_CODING	1002	832	278	V/M	Gtg/Atg	-	ENSP=ENSP00000370924;PolyPhen=possibly_damaging(0.855);SIFT=deleterious(0.05);HGNC=SMARCD1	G	A/A,A/A	G	G	G	N/N,N/N	.	1.0	CpG	5.32	0.990	0.928	218	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=60;Dels=0.00;FS=0.000;GAnc=G;GRP=5.32;HRun=0;HaplotypeScore=0.0000;MQ=38.73;MQ0=0;Map20=1;OAnc=G;QD=36.68;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=218;mSC=0.990;pSC=0.928	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1280,99,0:15,19:0,0:0,0:0,0:0:38.73:0;1/1:26:78.25:1029,78,0:15,11:0,0:0,0:0,0:0:37.00:0	+
12_51279339_A/T	12	51279339	T	ENSG00000186452	ENST00000551456	Transcript	STOP_LOST	1008	963	321	*/C	tgA/tgT	-	ENSP=ENSP00000447259;HGNC=TMPRSS12	A	T/T,T/T	A	A	A	N/N,N/N	.	1	.	-1.37	0.003	0.176	366	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=94;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.37;HRun=2;HaplotypeScore=0.0000;MQ=38.39;MQ0=0;Map20=1;OAnc=A;QD=36.44;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=366;mSC=0.003;pSC=0.176	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2365,181,0:0,0:0,0:0,0:21,42:0:38.39:0;1/1:30:90.28:1145,90,0:0,0:0,0:0,0:10,20:0:37.00:0	+
12_53238347_G/A	12	53238347	A	ENSG00000170423	ENST00000304620	Transcript	NON_SYNONYMOUS_CODING	981	917	306	T/I	aCc/aTc	-	ENSP=ENSP00000306261;PolyPhen=possibly_damaging(0.444);SIFT=deleterious(0.05);HGNC=KRT78	G	A/A,A/A	G	G	G	N/N,N/N	rs61764062	0.94	.	-2.15	0.996	0.661	667	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AMR_AF=0.11;AN=4;ASN_AF=0.11;BaseQRankSum=0.893;CAnc=G;DP=54;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=-2.15;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=0.368;Map20=1;OAnc=G;QD=35.66;ReadPosRankSum=-0.893;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=667;mSC=0.996;pSC=0.661	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:59.31:1210,59,0:15,16:0,0:1,0:0,0:0:37.00:0;1/1:21:63.19:812,63,0:13,8:0,0:0,0:0,0:0:37.00:0	-
12_53451849_G/C	12	53451849	C	ENSG00000111077	ENST00000314250	Transcript	NON_SYNONYMOUS_CODING	1348	1058	353	S/T	aGc/aCc	-	ENSP=ENSP00000319684;PolyPhen=benign(0.161);SIFT=tolerated(1);HGNC=TENC1	G	C/C,C/C	G	G	G	N/N,N/N	rs11170389	0.94	.	4.18	0.988	0.971	612	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.16;CAnc=G;DP=47;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=4.18;HRun=2;HaplotypeScore=0.0000;MQ=38.06;MQ0=0;Map20=1;OAnc=G;QD=36.44;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=612;mSC=0.988;pSC=0.971	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:81.25:1053,81,0:0,0:13,14:0,0:1,0:0:38.06:0;1/1:19:57.17:734,57,0:0,0:7,12:0,0:0,0:0:37.00:0	+
12_56086936_T/C	12	56086936	C	ENSG00000135424	ENST00000257879	Transcript	NON_SYNONYMOUS_CODING	2917	2701	901	I/V	Atc/Gtc	-	ENSP=ENSP00000257879;PolyPhen=benign(0.139);SIFT=tolerated(0.26);HGNC=ITGA7	T	C/C,C/C	T	T	T	N/N,N/N	rs113651939	1.0	.	2.62	1.000	0.963	462	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;ASN_AF=0.01;BaseQRankSum=0.619;CAnc=T;DP=50;Dels=0.00;FS=0.000;GAnc=T;GRP=2.62;HRun=0;HaplotypeScore=0.9997;MQ=40.10;MQ0=0;MQRankSum=-0.619;Map20=1;OAnc=T;QD=34.84;ReadPosRankSum=-1.733;TS=HPGOC;TSseq=T,T,T,T,T;UR;bSC=462;mSC=1.000;pSC=0.963	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:44.26:1009,44,0:0,0:14,12:0,0:0,1:0:40.10:0;1/1:22:66.20:857,66,0:0,0:11,11:0,0:0,0:0:37.00:0	-
12_56532718_C/G	12	56532718	G	ENSG00000139641	ENST00000267113	Transcript	NON_SYNONYMOUS_CODING	2596	2543	848	S/W	tCg/tGg	-	ENSP=ENSP00000267113;PolyPhen=possibly_damaging(0.807);SIFT=tolerated(0.18);HGNC=ESYT1	C	G/G,G/G	C	-	C	N/N,N/N	rs79083300	0.99	CpG	4.33	0.110	0.325	72	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.03;BaseQRankSum=0.545;CAnc=C;CpG;DP=70;Dels=0.00;FS=3.399;GRP=4.33;HRun;HaplotypeScore=0.0000;MQ=38.68;MQ0=0;MQRankSum=-0.446;Map20=1;OAnc=C;QD=35.53;ReadPosRankSum=-0.842;TS=HPOMC;TSseq=C,C,C,C,C;bSC=72;mSC=0.110;pSC=0.325	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:65.32:1277,65,0:0,0:1,0:15,19:0,0:0:38.68:0;1/1:35:99:1357,105,0:0,0:0,0:17,18:0,0:0:37.00:0	+
12_76454812_G/C	12	76454812	C	ENSG00000187109	ENST00000547479	Transcript	NON_SYNONYMOUS_CODING	401	262	88	Q/E	Cag/Gag	-	ENSP=ENSP00000449333;PolyPhen=unknown(0);SIFT=deleterious(0.02);HGNC=NAP1L1	G	C/C,C/C	G	G	G	N/N,N/N	rs12313250	0.98	RM	0.421	0.018	.	745	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=G;DP=85;Dels=0.00;FS=0.000;GAnc=G;GRP=0.421;HRun=0;HaplotypeScore=0.0000;MQ=38.43;MQ0=0;Map20=1;OAnc=G;QD=38.77;RM;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=745;mSC=0.018	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1933,147,0:0,0:25,24:0,0:0,0:0:38.43:0;1/1:36:99:1345,102,0:0,0:12,24:0,0:0,0:0:37.00:0	-
12_85277592_C/T	12	85277592	T	ENSG00000072041	ENST00000450363	Transcript	NON_SYNONYMOUS_CODING	1261	802	268	G/R	Gga/Aga	-	ENSP=ENSP00000390706;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=SLC6A15	C	T/T,T/T	C	C	C	N/N,N/N	rs77477149	0.96	.	0.612	0.000	.	701	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;BaseQRankSum=-0.666;CAnc=C;DP=89;Dels=0.00;FS=0.000;GAnc=C;GRP=0.612;HRun=0;HaplotypeScore=0.0000;MQ=38.67;MQ0=0;MQRankSum=-0.666;Map20=1;OAnc=C;QD=36.00;ReadPosRankSum=0.733;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=701;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1941,113,0:0,0:1,0:0,0:33,19:0:38.67:0;1/1:36:99:1413,108,0:0,0:0,0:0,0:19,17:0:37.00:0	-
12_96131895_A/G	12	96131895	G	ENSG00000074527	ENST00000343702	Transcript	NON_SYNONYMOUS_CODING	1062	613	205	Y/H	Tac/Cac	-	ENSP=ENSP00000340998;PolyPhen=benign(0.003);SIFT=tolerated(0.57);HGNC=NTN4	A	G/G,G/G	A	A	A	N/N,N/N	rs17288108	0.91	.	1.57	0.003	.	829	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AMR_AF=0.10;AN=4;ASN_AF=0.01;CAnc=A;DP=84;Dels=0.00;EUR_AF=0.19;FS=0.000;GAnc=A;GRP=1.57;HRun=0;HaplotypeScore=0.9958;MQ=37.99;MQ0=0;Map20=1;OAnc=A;QD=38.20;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=829;mSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1943,150,0:0,0:0,0:20,29:0,0:0:37.99:0;1/1:34:99:1321,102,0:0,0:0,0:21,13:0,0:0:37.00:0	-
12_97157933_C/A	12	97157933	A	ENSG00000188596	ENST00000342887	Transcript	NON_SYNONYMOUS_CODING	3398	3320	1107	P/H	cCt/cAt	-	ENSP=ENSP00000345466;PolyPhen=possibly_damaging(0.543);SIFT=tolerated(0.28);HGNC=C12orf55	C	A/A,A/A	C	C	C	N/N,N/N	rs12581184	0.97	.	-2.19	0.000	.	637	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.04;AN=4;ASN_AF=0.10;BaseQRankSum=0.962;CAnc=C;DP=85;Dels=0.00;FS=3.979;GAnc=C;GRP=-2.19;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=1.193;Map20=1;OAnc=C;QD=37.43;ReadPosRankSum=-1.116;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=637;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:95.44:1717,95,0:27,17:0,1:0,0:0,0:0:37.00:0;1/1:40:80.38:1479,80,0:26,13:0,1:0,0:0,0:0:37.00:0	+
12_97186242_C/A	12	97186242	A	ENSG00000188596	ENST00000524981	Transcript	NON_SYNONYMOUS_CODING	8838	8815	2939	P/T	Ccc/Acc	-	ENSP=ENSP00000431759;PolyPhen=possibly_damaging(0.867);SIFT=deleterious(0.02);HGNC=C12orf55	C	A/A,A/A	C	C	C	N/N,N/N	rs12582405	0.97	.	5.33	1.000	.	667	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.04;AN=4;ASN_AF=0.10;CAnc=C;DP=87;Dels=0.00;FS=0.000;GAnc=C;GRP=5.33;HRun=0;HaplotypeScore=1.9984;MQ=37.54;MQ0=0;Map20=1;OAnc=C;QD=36.74;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=667;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2054,159,0:25,29:0,0:0,0:0,0:0:37.54:0;1/1:32:96.31:1272,96,0:14,18:0,0:0,0:0,0:0:37.00:0	+
12_111800977_C/G	12	111800977	G	ENSG00000198324	ENST00000450786	Transcript	NON_SYNONYMOUS_CODING	359	197	66	G/A	gGa/gCa	-	ENSP=ENSP00000390552;PolyPhen=possibly_damaging(0.886);HGNC=FAM109A	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	-8.76	.	.	341	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.174;CAnc=C;DP=43;Dels=0.00;FS=0.000;GAnc=C;GRP=-8.76;HRun=0;HaplotypeScore=0.9997;MQ=37.93;MQ0=0;MQRankSum=1.062;Map20=1;OAnc=C;QD=35.09;ReadPosRankSum=1.174;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=341	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:53.30:1156,53,0:0,1:1,0:16,14:0,0:0:37.93:0;1/1:11:33.09:399,33,0:0,0:0,0:4,7:0,0:0:37.00:0	-
12_112174773_C/G	12	112174773	G	ENSG00000111271	ENST00000313698	Transcript	NON_SYNONYMOUS_CODING	1834	1679	560	A/G	gCa/gGa	-	ENSP=ENSP00000325137;PolyPhen=benign(0.088);SIFT=tolerated(0.38);HGNC=ACAD10	C	G/G,G/G	C	C	C	N/N,N/N	rs35716113	0.98	.	4.4	0.055	.	108	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=C;DP=77;Dels=0.00;FS=0.000;GAnc=C;GRP=4.4;HRun;HaplotypeScore=3.9965;MQ=38.70;MQ0=0;Map20=1;OAnc=C;QD=38.84;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=108;mSC=0.055	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2053,157,0:0,0:0,0:21,31:0,0:0:38.70:0;1/1:25:35.24:920,35,0:0,0:1,0:11,13:0,0:0:37.00:0	+
12_112191417_A/G	12	112191417	G	ENSG00000111271	ENST00000512792	Transcript	NON_SYNONYMOUS_CODING	884	124	42	T/A	Aca/Gca	-	ENSP=ENSP00000449813;PolyPhen=unknown(0);HGNC=ACAD10	A	G/G,G/G	A	A	A	N/N,N/N	rs75822212	0.98	.	-2.31	0.000	.	107	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;BaseQRankSum=-1.155;CAnc=A;DP=56;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.31;HRun=0;HaplotypeScore=0.0000;MQ=36.72;MQ0=0;MQRankSum=1.251;Map20=1;OAnc=A;QD=35.89;ReadPosRankSum=0.096;TS=HPGOMC;TSseq=A,A,A,A,A,G;UR;bSC=107;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:68.34:1325,68,0:0,1:0,0:17,18:0,0:0:36.72:0;1/1:20:60.19:790,60,0:0,0:0,0:11,9:0,0:0:37.00:0	+
12_113863963_C/G	12	113863963	G	ENSG00000257606	ENST00000547342	Transcript	NON_SYNONYMOUS_CODING	144	115	39	G/R	Ggg/Cgg	-	ENSP=ENSP00000449061;PolyPhen=unknown(0)	C	G/G,G/G	C	C	C	N/N,N/N	rs12831817	0.92	.	-0.6	0.001	.	889	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.21;AMR_AF=0.09;AN=4;ASN_AF=0.02;CAnc=C;DP=49;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-0.6;HRun=0;HaplotypeScore=3.1395;MQ=39.43;MQ0=0;Map20=1;OAnc=C;QD=37.35;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=889;mSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1377,108,0:0,0:0,0:19,15:0,0:0:39.43:0;1/1:13:39.12:506,39,0:0,0:0,0:9,4:0,0:0:37.00:0	-
12_120067643_A/G	12	120067643	G	ENSG00000224982	ENST00000426426	Transcript	NON_SYNONYMOUS_CODING	679	289	97	I/V	Atc/Gtc	-	ENSP=ENSP00000403130;PolyPhen=benign(0.057);SIFT=tolerated(0.27);HGNC=TMEM233	A	G/G,G/G	A	A	-	N/N,N/N	rs187625128	1.0	.	5.3	.	.	660	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=A;DP=87;Dels=0.00;FS=0.000;GAnc=A;GRP=5.3;HRun=0;HaplotypeScore=3.9989;MQ=37.98;MQ0=0;Map20=1;QD=39.02;TS=HPGM;TSseq=A,A,A,A;bSC=660	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2413,184,0:0,0:0,0:29,32:0,0:0:37.98:0;1/1:26:38.25:954,38,0:0,1:0,0:16,9:0,0:0:37.00:0	+
12_120306870_G/A	12	120306870	A	ENSG00000122966	ENST00000261833	Transcript	NON_SYNONYMOUS_CODING	285	232	78	R/W	Cgg/Tgg	-	ENSP=ENSP00000261833;PolyPhen=benign(0.199);SIFT=deleterious(0.02);HGNC=CIT	G	A/A,A/A	G	G	G	N/N,N/N	rs186505065	1.0	CpG	3.43	1.000	.	614	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=111;Dels=0.00;FS=0.000;GAnc=G;GRP=3.43;HRun=0;HaplotypeScore=0.0000;MQ=37.92;MQ0=0;Map20=1;OAnc=G;QD=37.56;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=614;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2474,190,0:34,30:0,0:0,0:0,0:0:37.92:0;1/1:46:99:1802,138,0:25,21:0,0:0,0:0,0:0:37.00:0	-
12_120661970_C/T	12	120661970	T	ENSG00000089159	ENST00000228307	Transcript	NON_SYNONYMOUS_CODING	366	224	75	R/Q	cGa/cAa	-	ENSP=ENSP00000228307;PolyPhen=possibly_damaging(0.548);SIFT=deleterious(0.01);HGNC=PXN	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	5.61	1.000	.	291	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=C;GRP=5.61;HRun;HaplotypeScore=0.9997;MQ=36.72;MQ0=0;Map20=1;OAnc=C;QD=37.61;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=291;mSC=1.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1387,105,0:0,0:0,0:0,0:15,21:0:36.72:0;1/1:14:39.12:510,39,0:0,0:0,0:0,0:4,10:0:36.27:0	-
12_123068826_G/A	12	123068826	A	ENSG00000184445	ENST00000333479	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	3442	3265	1089	D/N	Gac/Aac	-	ENSP=ENSP00000328236;PolyPhen=benign(0.02);SIFT=tolerated(0.43);HGNC=KNTC1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	4.58	0.180	.	253	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=79;Dels=0.00;FS=0.000;GAnc=G;GRP=4.58;HRun;HaplotypeScore=0.0000;MQ=37.65;MQ0=0;Map20=1;OAnc=G;QD=37.88;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=253;mSC=0.180	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1775,135,0:18,28:0,0:0,0:0,0:0:37.65:0;1/1:33:99:1316,99,0:10,23:0,0:0,0:0,0:0:37.00:0	+
12_125465142_G/A	12	125465142	A	ENSG00000150990	ENST00000308736	Transcript	NON_SYNONYMOUS_CODING	731	632	211	P/L	cCg/cTg	-	ENSP=ENSP00000311135;PolyPhen=possibly_damaging(0.833);SIFT=tolerated(0.21);HGNC=DHX37	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	0.636	0.000	.	940	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=50;Dels=0.00;FS=0.000;GAnc=G;GRP=0.636;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=35.28;TS=HPGOMC;TSseq=G,G,G,A,G,G;UR;bSC=940;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:93.30:1233,93,0:16,18:0,0:0,0:0,0:0:37.00:0;1/1:16:48.16:640,48,0:7,9:0,0:0,0:0,0:0:37.00:0	-
13_21296036_C/G	13	21296036	G	ENSG00000172458	ENST00000304920	Transcript	NON_SYNONYMOUS_CODING	660	552	184	I/M	atC/atG	-	ENSP=ENSP00000302924;PolyPhen=benign(0.009);SIFT=tolerated(0.57);HGNC=IL17D	C	G/G,G/G	C	C	C	N/N,N/N	rs112043741	1.0	CpG	-3.27	0.458	0.965	583	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.02;AN=4;CAnc=C;CpG;DP=48;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.27;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.54;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=583;mSC=0.458;pSC=0.965	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1305,99,0:0,0:0,0:17,16:0,0:0:37.00:0;1/1:15:45.14:585,45,0:0,0:0,0:8,7:0,0:0:36.32:0	+
13_39422624_C/T	13	39422624	T	ENSG00000150893	ENST00000280481	Transcript	NON_SYNONYMOUS_CODING	6412	6196	2066	R/C	Cgt/Tgt	-	ENSP=ENSP00000280481;PolyPhen=probably_damaging(0.93);SIFT=deleterious(0);HGNC=FREM2	C	T/T,T/T	C	C	C	N/N,N/N	rs9548505	0.91	CpG	5.66	0.052	0.874	724	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.12;AMR_AF=0.20;AN=4;CAnc=C;CpG;DP=63;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=C;GRP=5.66;HRun=0;HaplotypeScore=0.0000;MQ=39.37;MQ0=0;Map20=1;OAnc=C;QD=37.85;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=724;mSC=0.052;pSC=0.874	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1433,108,0:0,0:0,0:0,0:18,19:0:39.37:0;1/1:26:78.25:1030,78,0:0,0:0,0:0,0:12,14:0:36.61:0	+
13_46559789_C/T	13	46559789	T	ENSG00000123200	ENST00000242848	Transcript	NON_SYNONYMOUS_CODING	1712	1363	455	G/S	Ggt/Agt	-	ENSP=ENSP00000242848;PolyPhen=unknown(0);HGNC=ZC3H13	C	T/T,T/T	C	C	C	N/N,N/N	rs149835200	1.0	.	4.87	.	.	460	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=75;Dels=0.00;FS=0.000;GAnc=C;GRP=4.87;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=39.27;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=460	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1918,144,0:0,0:0,0:0,0:22,26:0:37.00:0;1/1:27:81.27:1075,81,0:0,0:0,0:0,0:10,17:0:37.00:0	-
13_46844627_C/A	13	46844627	A	ENSG00000173988	ENST00000446175	Transcript	NON_SYNONYMOUS_CODING	1961	1616	539	T/N	aCt/aAt	-	ENSP=ENSP00000408828;PolyPhen=possibly_damaging(0.637);SIFT=deleterious(0.03);HGNC=LRRC63	C	A/A,A/A	C	C	C	N/N,N/N	rs17067933	0.93	.	0.675	.	.	881	0.5	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.15;AMR_AF=0.05;AN=4;ASN_AF=0.05;CAnc=C;DP=110;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=0.675;HRun;HaplotypeScore=1.9993;MQ=38.27;MQ0=0;Map20=0.5;OAnc=C;QD=38.08;TS=HPGOMC;TSseq=C,C,C,C,C,-;bSC=881	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:70:99:2698,208,0:47,22:0,0:0,0:0,0:0:38.27:0;1/1:40:99:1552,120,0:22,18:0,0:0,0:0,0:0:37.00:0	+
13_46935652_C/T	13	46935652	T	ENSG00000102445	ENST00000322896	Transcript	NON_SYNONYMOUS_CODING	673	572	191	R/H	cGc/cAc	-	ENSP=ENSP00000315633;PolyPhen=possibly_damaging(0.867);SIFT=deleterious(0);HGNC=KIAA0226L	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	CpG	-1.18	.	.	811	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.247;CAnc=C;CpG;DP=90;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.18;HRun=0;HaplotypeScore=0.9916;MQ=37.58;MQ0=0;MQRankSum=-1.732;Map20=1;OAnc=C;QD=35.72;ReadPosRankSum=1.178;TS=HPGOC;TSseq=C,C,C,N,C;UR;bSC=811	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1890,106,0:0,0:1,0:0,0:29,21:0:37.58:0;1/1:38:99:1487,114,0:0,0:0,0:0,0:22,16:0:37.00:0	-
13_52951949_C/T	13	52951949	T	ENSG00000136114	ENST00000258613	Transcript	NON_SYNONYMOUS_CODING	2335	2156	719	R/H	cGt/cAt	-	ENSP=ENSP00000258613;PolyPhen=benign(0.152);SIFT=deleterious(0.04);HGNC=THSD1	C	T/T,T/T	C	C	-	N/N,N/N	.	1	CpG	2.39	.	.	292	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=78;Dels=0.00;FS=0.000;GAnc=C;GRP=2.39;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;QD=37.37;TS=HPG;TSseq=C,N,C;bSC=292	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2014,153,0:0,0:0,0:0,0:24,28:0:37.00:0;1/1:25:75.24:980,75,0:0,0:0,0:0,0:13,12:0:37.00:0	-
13_52952034_C/G	13	52952034	G	ENSG00000136114	ENST00000258613	Transcript	NON_SYNONYMOUS_CODING	2250	2071	691	A/P	Gca/Cca	-	ENSP=ENSP00000258613;PolyPhen=benign(0.308);SIFT=tolerated(0.19);HGNC=THSD1	C	G/G,G/G	C	C	-	N/N,N/N	.	1	.	2.56	.	.	292	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=53;Dels=0.00;FS=0.000;GAnc=C;GRP=2.56;HRun;HaplotypeScore=1.9981;MQ=37.00;MQ0=0;Map20=1;QD=38.52;TS=HPG;TSseq=C,N,C;bSC=292	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1304,99,0:0,0:0,0:17,15:0,0:0:37.00:0;1/1:20:60.19:781,60,0:0,0:0,0:12,8:0,0:0:37.00:0	-
13_52952634_C/G	13	52952634	G	ENSG00000136114	ENST00000258613	Transcript	NON_SYNONYMOUS_CODING	1650	1471	491	D/H	Gac/Cac	-	ENSP=ENSP00000258613;PolyPhen=possibly_damaging(0.837);SIFT=deleterious(0.01);HGNC=THSD1	C	G/G,G/G	C	C	-	N/N,N/N	rs56013270	0.98	.	5.21	.	.	291	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AN=4;BaseQRankSum=1.070;CAnc=C;DP=51;Dels=0.00;FS=0.000;GAnc=C;GRP=5.21;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-0.173;Map20=1;QD=32.68;ReadPosRankSum=0.035;TS=HPG;TSseq=C,C,N;bSC=291	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:33.08:1242,33,0:0,0:1,0:23,11:1,0:0:37.00:0;1/1:14:39.13:516,39,0:0,0:0,0:10,4:0,0:0:37.00:0	-
13_52971718_G/C	13	52971718	C	ENSG00000136114	ENST00000258613	Transcript	NON_SYNONYMOUS_CODING	849	670	224	R/G	Cga/Gga	-	ENSP=ENSP00000258613;PolyPhen=benign(0.096);SIFT=tolerated(0.11);HGNC=THSD1	G	C/C,C/C	G	G	-	N/N,N/N	rs9536062	0.96	CpG	2.47	.	0.922	288	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.10;AMR_AF=0.03;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=53;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=G;GRP=2.47;HRun=3;HaplotypeScore=0.9997;MQ=38.84;MQ0=0;Map20=1;QD=37.88;TS=HPG;TSseq=G,G,G;bSC=288;pSC=0.922	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.31:1245,96,0:0,0:14,18:0,0:0,0:0:38.84:0;1/1:21:63.20:811,63,0:0,0:9,12:0,0:0,0:0:37.00:0	-
13_111110569_C/T	13	111110569	T	ENSG00000224821	ENST00000458403	Transcript	NON_SYNONYMOUS_CODING	330	248	83	G/D	gGc/gAc	-	ENSP=ENSP00000390212;PolyPhen=probably_damaging(0.958);SIFT=deleterious(0);HGNC=COL4A2-AS2	C	T/T,T/T	C	C	C	N/N,N/N	rs186477441	1.0	.	-0.256	0.001	0.014	964	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=C;DP=56;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.256;HRun=0;HaplotypeScore=0.9997;MQ=37.93;MQ0=0;Map20=1;OAnc=C;QD=36.51;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=964;mSC=0.001;pSC=0.014	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:93.28:1201,93,0:0,0:0,0:0,0:18,14:0:37.93:0;1/1:24:72.23:939,72,0:0,0:0,0:0,0:12,12:0:37.00:0	-
13_111176316_T/C	13	111176316	C	ENSG00000139832	ENST00000267328	Transcript	NON_SYNONYMOUS_CODING	615	401	134	N/S	aAt/aGt	-	ENSP=ENSP00000267328;PolyPhen=benign(0.02);SIFT=tolerated(0.6);HGNC=RAB20	T	C/C,C/C	T	T	T	N/N,N/N	rs426453	0.95	.	-0.571	0.000	0.006	970	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.18;AMR_AF=0.03;AN=4;BaseQRankSum=-1.501;CAnc=T;DP=69;Dels=0.00;FS=3.108;GAnc=T;GRP=-0.571;HRun=0;HaplotypeScore=3.9595;MQ=37.00;MQ0=0;MQRankSum=-0.038;Map20=1;OAnc=T;QD=37.39;ReadPosRankSum=1.116;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=970;mSC=0.000;pSC=0.006	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:95.44:1716,95,0:0,0:21,23:0,0:1,0:0:37.00:0;1/1:24:72.23:947,72,0:0,0:12,12:0,0:0,0:0:37.00:0	-
13_113333793_A/C	13	113333793	C	ENSG00000197595	ENST00000356049	Transcript	NON_SYNONYMOUS_CODING	858	100	34	K/Q	Aag/Cag	-	ENSP=ENSP00000348337;PolyPhen=possibly_damaging(0.627);HGNC=C13orf35	A	C/C,C/C	A	A	A	N/N,N/N	rs117237810	1.0	.	-2.43	0.001	0.020	982	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=A;DP=58;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.43;HRun=0;HaplotypeScore=0.9997;MQ=37.77;MQ0=0;Map20=1;OAnc=A;QD=38.45;TS=HPGOM;TSseq=A,A,A,A,A;bSC=982;mSC=0.001;pSC=0.020	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1533,117,0:0,0:14,24:0,0:0,0:0:37.77:0;1/1:19:57.19:750,57,0:0,0:12,7:0,0:0,0:0:37.00:0	+
13_113973832_C/T	13	113973832	T	ENSG00000185896	ENST00000332556	Transcript	NON_SYNONYMOUS_CODING	805	611	204	A/V	gCg/gTg	-	ENSP=ENSP00000333298;PolyPhen=benign(0.011);SIFT=tolerated(0.2);HGNC=LAMP1	C	T/T,T/T	C	C	C	N/N,N/N	rs9577229	0.92	CpG	0.159	.	0.355	929	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.18;AMR_AF=0.05;AN=4;ASN_AF=0.13;CAnc=C;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=C;GRP=0.159;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.90;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=929;pSC=0.355	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:96.30:1251,96,0:0,0:0,0:0,0:17,14:0:37.00:0;1/1:21:63.21:833,63,0:0,0:0,0:0,0:13,8:0:37.00:0	+
14_20404076_A/T	14	20404076	T	ENSG00000155249	ENST00000285600	Transcript	NON_SYNONYMOUS_CODING	310	251	84	D/V	gAc/gTc	-	ENSP=ENSP00000285600;PolyPhen=probably_damaging(0.988);SIFT=deleterious(0);HGNC=OR4K1	A	T/T,T/T	A	A	-	N/N,N/N	rs114526346	0.98	.	4.94	.	.	900	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AN=4;ASN_AF=0.03;CAnc=A;DP=82;Dels=0.00;FS=0.000;GAnc=A;GRP=4.94;HRun=0;HaplotypeScore=0.0000;MQ=38.61;MQ0=0;Map20=1;QD=39.03;TS=HPG;TSseq=A,A,A;bSC=900	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2179,166,0:0,0:0,0:0,0:18,37:0:38.61:0;1/1:27:81.26:1061,81,0:0,0:0,0:0,0:13,14:0:37.00:0	+
14_22279687_C/T	14	22279687	T	ENSG00000211783	ENST00000390431	Transcript	NON_SYNONYMOUS_CODING	14	14	5	P/L	cCa/cTa	-	ENSP=ENSP00000438446;PolyPhen=benign(0.15);SIFT=tolerated(0.1);HGNC=TRAV9-1	C	T/T,T/T	C	C	C	N/N,N/N	rs35761773	0.96	.	2.65	0.083	0.026	940	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.02;AN=4;CAnc=C;DP=91;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=2.65;HRun=0;HaplotypeScore=0.0000;MQ=37.53;MQ0=0;Map20=1;OAnc=C;QD=36.31;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=940;mSC=0.083;pSC=0.026	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1776,135,0:0,0:0,0:0,0:28,20:0:37.53:0;1/1:43:99:1675,129,0:0,0:0,0:0,0:22,21:0:37.00:0	+
14_22279975_A/T	14	22279975	T	ENSG00000211783	ENST00000390431	Transcript	NON_SYNONYMOUS_CODING	164	164	55	Y/F	tAt/tTt	-	ENSP=ENSP00000438446;PolyPhen=probably_damaging(0.99);SIFT=deleterious(0);HGNC=TRAV9-1	A	T/T,T/T	A	A	A	N/N,N/N	rs34904980	0.97	.	4	0.993	0.351	940	0.5	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.10;AMR_AF=0.02;AN=4;BaseQRankSum=1.485;CAnc=A;DP=84;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=A;GRP=4;HRun;HaplotypeScore=0.9997;MQ=36.80;MQ0=0;MQRankSum=1.609;Map20=0.5;OAnc=A;QD=36.47;ReadPosRankSum=-0.247;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=940;mSC=0.993;pSC=0.351	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:58:99:2148,129,0:0,1:0,0:0,0:27,30:0:36.80:0;1/1:26:78.25:1032,78,0:0,0:0,0:0,0:10,16:0:37.00:0	+
14_23103044_C/T	14	23103044	T	ENSG00000255804	ENST00000540461	Transcript	NON_SYNONYMOUS_CODING	673	673	225	V/M	Gtg/Atg	-	ENSP=ENSP00000437629;PolyPhen=benign(0.117);SIFT=deleterious(0.01);HGNC=OR6J1	C	T/T,T/T	C	C	C	N/N,N/N	rs1681598	0.98	.	-2.91	.	.	889	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.03;AN=4;BaseQRankSum=0.456;CAnc=C;DP=81;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-2.91;HRun;HaplotypeScore=2.9660;MQ=40.68;MQ0=0;MQRankSum=-0.182;Map20=1;OAnc=C;QD=35.38;ReadPosRankSum=1.185;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=889	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:74.36:1413,74,0:0,0:1,0:0,0:23,15:0:40.68:0;1/1:42:99:1651,126,0:0,0:0,0:0,0:18,24:0:37.00:0	-
14_23103304_G/T	14	23103304	T	ENSG00000255804	ENST00000540461	Transcript	NON_SYNONYMOUS_CODING	413	413	138	S/Y	tCt/tAt	-	ENSP=ENSP00000437629;PolyPhen=possibly_damaging(0.9);SIFT=deleterious(0.01);HGNC=OR6J1	G	T/T,T/T	G	G	G	N/N,N/N	rs45470397	0.98	.	0.937	.	.	889	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.03;AN=4;BaseQRankSum=0.663;CAnc=G;DP=85;Dels=0.00;EUR_AF=0.04;FS=2.827;GAnc=G;GRP=0.937;HRun=0;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=0.144;Map20=1;OAnc=G;QD=33.79;ReadPosRankSum=-0.029;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=889	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:49.40:1520,49,0:0,0:0,0:2,0:26,16:0:37.00:0;1/1:41:99:1599,123,0:0,0:0,0:0,0:19,22:0:37.00:0	-
14_23103356_G/A	14	23103356	A	ENSG00000255804	ENST00000540461	Transcript	NON_SYNONYMOUS_CODING	361	361	121	R/C	Cgt/Tgt	-	ENSP=ENSP00000437629;PolyPhen=benign(0.201);SIFT=deleterious(0.03);HGNC=OR6J1	G	A/A,A/A	G	G	G	N/N,N/N	rs45494902	0.98	CpG	-2.35	.	.	889	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.03;AN=4;BaseQRankSum=0.363;CAnc=G;CpG;DP=58;Dels=0.00;EUR_AF=0.04;FS=3.112;GAnc=G;GRP=-2.35;HRun=0;HaplotypeScore=0.0000;MQ=36.95;MQ0;MQRankSum=0.121;Map20=1;OAnc=G;QD=35.20;ReadPosRankSum=-1.249;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=889	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:89.40:1582,89,0:21,22:0,0:1,0:0,0:0:36.95:1;1/1:14:42.13:544,42,0:7,7:0,0:0,0:0,0:0:37.00:0	-
14_23374172_T/C	14	23374172	C	ENSG00000100461	ENST00000338980	Transcript	NON_SYNONYMOUS_CODING	973	707	236	N/S	aAt/aGt	-	ENSP=ENSP00000345496;PolyPhen=benign(0.003);SIFT=tolerated(1);HGNC=RBM23	T	C/C,C/C	T	T	C	N/N,N/N	.	1	.	2.99	0.999	0.860	374	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=66;Dels=0.01;FS=0.000;GAnc=T;GRP=2.99;HRun=0;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;Map20=1;OAnc=C;QD=39.02;TS=HPGOMC;TSseq=T,T,T,C,C,G;UR;bSC=374;mSC=0.999;pSC=0.860	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1438,108,0:0,0:24,12:0,0:0,0:0:37.83:0;1/1:29:87.25:1122,87,0:0,0:14,15:0,0:0,0:0:37.00:0	-
14_24108161_A/G	14	24108161	G	ENSG00000100867	ENST00000250383	Transcript	NON_SYNONYMOUS_CODING	564	88	30	R/G	Agg/Ggg	-	ENSP=ENSP00000250383;PolyPhen=benign(0.081);SIFT=deleterious(0.03);HGNC=DHRS2	A	G/G,G/G	A	A	C	N/N,N/N	rs150935741	0.99	.	-8.04	0.000	.	873	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=A;DP=48;Dels=0.00;FS=0.000;GAnc=A;GRP=-8.04;HRun=2;HaplotypeScore=0.9997;MQ=37.97;MQ0=0;Map20=1;OAnc=C;QD=38.03;TS=HPGOMC;TSseq=A,G,A,C,C,T;UR;bSC=873;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:26:78.25:1022,78,0:0,0:0,0:9,17:0,0:0:37.97:0;1/1:22:66.22:874,66,0:0,0:0,0:17,5:0,0:0:37.00:0	+
14_24112389_C/T	14	24112389	T	ENSG00000100867	ENST00000250383	Transcript	NON_SYNONYMOUS_CODING	925	449	150	A/V	gCc/gTc	-	ENSP=ENSP00000250383;PolyPhen=benign(0.024);SIFT=tolerated(0.13);HGNC=DHRS2	C	T/T,T/T	C	C	C	N/N,N/N	rs138994765	0.99	.	3.57	0.994	0.209	884	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;CAnc=C;DP=75;Dels=0.00;FS=0.000;GAnc=C;GRP=3.57;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.95;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=884;mSC=0.994;pSC=0.209	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1733,132,0:0,0:0,0:0,0:22,24:0:37.00:0;1/1:29:87.29:1160,87,0:0,0:0,0:0,0:14,15:0:37.00:0	+
14_24113728_T/G	14	24113728	G	ENSG00000100867	ENST00000250383	Transcript	NON_SYNONYMOUS_CODING	1127	651	217	I/M	atT/atG	-	ENSP=ENSP00000250383;PolyPhen=benign(0.213);SIFT=deleterious(0.04);HGNC=DHRS2	T	G/G,G/G	T	T	T	N/N,N/N	rs114326060	0.99	.	-9.93	0.000	0.036	884	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;BaseQRankSum=-0.360;CAnc=T;DP=87;Dels=0.00;FS=0.000;GAnc=T;GRP=-9.93;HRun=0;HaplotypeScore=0.9997;MQ=37.56;MQ0=0;MQRankSum=-0.425;Map20=1;OAnc=T;QD=37.58;ReadPosRankSum=0.033;TS=HPGOMC;TSseq=T,T,T,T,A,G;UR;bSC=884;mSC=0.000;pSC=0.036	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2025,120,0:0,0:0,0:27,25:1,0:0:37.56:0;1/1:34:99:1350,102,0:0,0:0,0:17,17:0,0:0:37.00:0	+
14_31765126_T/C	14	31765126	C	ENSG00000129493	ENST00000389961	Transcript	NON_SYNONYMOUS_CODING	5590	5590	1864	K/E	Aaa/Gaa	-	ENSP=ENSP00000374611;PolyPhen=benign(0.004);SIFT=tolerated(0.88);HGNC=HEATR5A	T	C/C,C/C	T	T	T	N/N,N/N	rs61741258	0.96	.	4.51	0.261	0.884	458	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.13;AMR_AF=0.03;AN=4;ASN_AF=0.01;BaseQRankSum=-0.405;CAnc=T;DP=78;Dels=0.00;FS=0.000;GAnc=T;GRP=4.51;HRun=0;HaplotypeScore=0.0000;MQ=38.88;MQ0=0;MQRankSum=-0.479;Map20=1;OAnc=T;QD=37.06;ReadPosRankSum=-1.732;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=458;mSC=0.261;pSC=0.884	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1775,101,0:0,0:22,24:0,0:0,1:0:38.88:0;1/1:31:93.30:1218,93,0:0,0:15,16:0,0:0,0:0:37.00:0	-
14_38060646_C/T	14	38060646	T	ENSG00000129514	ENST00000250448	Transcript	NON_SYNONYMOUS_CODING	1405	1343	448	S/N	aGc/aAc	-	ENSP=ENSP00000250448;PolyPhen=benign(0.311);SIFT=tolerated(0.53);HGNC=FOXA1	C	T/T,T/T	C	C	C	N/N,N/N	rs33984772	0.96	.	3.24	0.962	0.826	604	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.05;AN=4;CAnc=C;DP=65;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=C;GRP=3.24;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.33;TS=HPGOMC;TSseq=C,C,C,C,C,N;UR;bSC=604;mSC=0.962;pSC=0.826	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1825,138,0:0,0:0,0:0,0:21,26:0:37.00:0;1/1:17:51.17:674,51,0:0,0:0,0:0,0:9,8:0:37.00:0	-
14_38273922_T/G	14	38273922	G	ENSG00000139865	ENST00000267368	Transcript	NON_SYNONYMOUS_CODING	416	260	87	I/S	aTt/aGt	-	ENSP=ENSP00000267368;PolyPhen=benign(0.002);SIFT=tolerated(0.14);HGNC=TTC6	T	G/G,G/G	T	-	T	N/N,N/N	rs12896790	0.96	.	2.55	0.001	0.043	791	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.04;AN=4;CAnc=T;DP=78;Dels=0.00;EUR_AF=0.09;FS=0.000;GRP=2.55;HRun=0;HaplotypeScore=0.0000;MQ=36.81;MQ0=0;Map20=1;OAnc=T;QD=38.93;TS=HPOMC;TSseq=T,T,T,T,T;UR;bSC=791;mSC=0.001;pSC=0.043	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2057,157,0:0,0:0,0:27,24:0,0:0:36.81:0;1/1:26:78.26:1033,78,0:0,0:0,0:15,11:0,0:0:37.00:0	+
14_50558441_T/C	14	50558441	C	ENSG00000168260	ENST00000305273	Transcript	NON_SYNONYMOUS_CODING	127	127	43	S/G	Agt/Ggt	-	ENSP=ENSP00000303234;PolyPhen=benign(0.336);HGNC=C14orf183	T	C/C,C/C	T	T	T	N/N,N/N	rs142236510	0.98	.	-1.43	0.000	0.320	428	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;CAnc=T;DP=67;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=-1.43;HRun;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;OAnc=T;QD=37.03;TS=HPGOMC;TSseq=T,T,T,T,T,N;bSC=428;mSC=0.000;pSC=0.320	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1662,126,0:0,1:20,22:0,0:1,0:0:37.68:0;1/1:23:69.21:887,69,0:0,0:8,15:0,0:0,0:0:37.00:0	-
14_50559288_A/G	14	50559288	G	ENSG00000168260	ENST00000305273	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	74	74	25	M/T	aTg/aCg	-	ENSP=ENSP00000303234;PolyPhen=benign(0.107);HGNC=C14orf183	A	G/G,G/G	A	A	A	N/N,N/N	rs79486477	0.98	.	0.548	0.000	0.823	428	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;BaseQRankSum=-1.121;CAnc=A;DP=97;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=A;GRP=0.548;HRun=0;HaplotypeScore=0.9958;MQ=38.77;MQ0=0;MQRankSum=-2.087;Map20=1;OAnc=A;QD=34.33;ReadPosRankSum=1.018;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=428;mSC=0.000;pSC=0.823	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:57.54:2059,58,0:1,2:0,0:28,28:0,0:0:38.77:0;1/1:38:34.36:1340,34,0:2,0:0,0:17,19:0,0:0:37.00:0	-
14_50802244_C/T	14	50802244	T	ENSG00000125375	ENST00000358473	Transcript	NON_SYNONYMOUS_CODING	769	769	257	R/C	Cgc/Tgc	-	ENSP=ENSP00000351258;PolyPhen=benign(0.003);SIFT=deleterious(0.03);HGNC=ATP5S	C	T/T,T/T	C	C	C	N/N,N/N	rs11570853	0.98	CpG	3.8	0.009	0.005	442	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;BaseQRankSum=-1.340;CAnc=C;CpG;DP=79;Dels=0.00;FS=0.000;GAnc=C;GRP=3.8;HRun=0;HaplotypeScore=2.9783;MQ=38.61;MQ0=0;MQRankSum=0.556;Map20=1;OAnc=C;QD=35.54;ReadPosRankSum=-0.425;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=442;mSC=0.009;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:1988,119,0:0,0:0,1:0,0:27,26:0:38.61:0;1/1:24:72.24:952,72,0:0,0:0,0:0,0:11,13:0:37.00:0	+
14_52294523_A/C	14	52294523	C	ENSG00000186469	ENST00000553432	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	174	62	21	K/T	aAa/aCa	-	ENSP=ENSP00000451279;PolyPhen=benign(0.001);SIFT=deleterious(0);HGNC=GNG2	A	C/C,C/C	A	A	A	N/N,N/N	rs17124563	0.96	.	0.883	0.000	0.017	917	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.12;AMR_AF=0.07;AN=4;ASN_AF=0.01;CAnc=A;DP=67;Dels=0.00;FS=0.000;GAnc=A;GRP=0.883;HRun=0;HaplotypeScore=0.0000;MQ=38.14;MQ0=0;Map20=1;OAnc=A;QD=38.90;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=917;mSC=0.000;pSC=0.017	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:99:1434,108,0:0,0:22,14:0,0:0,0:0:38.14:0;1/1:31:93.29:1192,93,0:0,0:22,9:0,0:0,0:0:37.00:0	+
14_55611839_A/T	14	55611839	T	ENSG00000131981	ENST00000254301	Transcript	NON_SYNONYMOUS_CODING	864	603	201	Q/H	caA/caT	-	ENSP=ENSP00000254301;PolyPhen=probably_damaging(0.994);SIFT=deleterious(0.03);HGNC=LGALS3	A	T/T,T/T	A	A	A	N/N,N/N	rs11125	0.96	.	2.37	0.432	0.751	397	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.10;AN=4;CAnc=A;DP=79;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=A;GRP=2.37;HRun=0;HaplotypeScore=0.0000;MQ=38.29;MQ0=0;Map20=1;OAnc=A;QD=36.01;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=397;mSC=0.432;pSC=0.751	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1689,129,0:0,0:0,0:0,0:28,18:0:38.29:0;1/1:33:96.31:1273,96,0:0,0:0,0:0,0:8,25:0:37.00:0	+
14_59939804_G/A	14	59939804	A	ENSG00000126790	ENST00000247194	Transcript	NON_SYNONYMOUS_CODING	1058	944	315	A/V	gCg/gTg	-	ENSP=ENSP00000247194;PolyPhen=benign(0.003);SIFT=tolerated(0.3);HGNC=C14orf149	G	A/A,A/A	G	G	G	N/N,N/N	rs1046701	0.96	CpG	.	.	.	506	.	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.03;AMR_AF=0.04;AN=4;ASN_AF=0.02;BaseQRankSum=-1.381;CAnc=G;CpG;DP=101;Dels=0.00;EUR_AF=0.06;FS=2.627;GAnc=G;HRun=0;HaplotypeScore=0.0000;MQ=39.01;MQ0=0;MQRankSum=2.114;OAnc=G;QD=34.88;ReadPosRankSum=-1.804;TS=HPGOMC;TSseq=G,-,G,G,G,A;UR;bSC=506	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:73:96.66:2579,97,0:44,23:0,0:3,0:0,0:0:39.01:0;1/1:28:84.27:1108,84,0:15,13:0,0:0,0:0,0:0:37.00:0	-
14_61517256_G/A	14	61517256	A	ENSG00000139974	ENST00000267488	Transcript	NON_SYNONYMOUS_CODING	1068	952	318	G/S	Ggt/Agt	-	ENSP=ENSP00000267488;PolyPhen=benign(0.207);SIFT=tolerated(0.46);HGNC=SLC38A6	G	A/A,A/A	G	G	G	N/N,N/N	rs74825213	0.99	.	2.1	0.845	0.861	338	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.04;CAnc=G;DP=108;Dels=0.00;FS=0.000;GAnc=G;GRP=2.1;HRun=4;HaplotypeScore=0.9469;MQ=38.25;MQ0=0;Map20=1;OAnc=G;QD=37.65;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=338;mSC=0.845;pSC=0.861	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:71:99:2706,208,0:39,32:0,0:0,0:0,0:0:38.25:0;1/1:37:99:1453,111,0:24,13:0,0:0,0:0,0:0:37.00:0	+
14_64497929_A/G	14	64497929	G	ENSG00000054654	ENST00000261678	Transcript	NON_SYNONYMOUS_CODING	7075	7075	2359	S/G	Agc/Ggc	-	ENSP=ENSP00000261678;PolyPhen=possibly_damaging(0.595);HGNC=SYNE2	A	G/G,G/G	A	A	A	N/N,N/N	rs7157465	0.96	.	2.73	0.469	0.070	365	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.16;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=A;DP=89;Dels=0.00;FS=0.000;GAnc=A;GRP=2.73;HRun;HaplotypeScore=1.9955;MQ=37.99;MQ0=0;Map20=1;OAnc=A;QD=38.59;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=365;mSC=0.469;pSC=0.070	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1963,150,0:0,0:0,0:30,19:0,0:0:37.99:0;1/1:39:99:1513,117,0:0,0:0,0:26,13:0,0:0:36.74:0	+
14_64497978_T/C	14	64497978	C	ENSG00000054654	ENST00000261678	Transcript	NON_SYNONYMOUS_CODING	7124	7124	2375	L/P	cTg/cCg	-	ENSP=ENSP00000261678;PolyPhen=benign(0.025);HGNC=SYNE2	T	C/C,C/C	T	T	T	N/N,N/N	rs111902869	0.99	.	0.00923	0.001	0.456	365	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;BaseQRankSum=-0.020;CAnc=T;DP=107;Dels=0.00;FS=3.026;GAnc=T;GRP=0.00923;HRun;HaplotypeScore=1.2434;MQ=38.07;MQ0=0;MQRankSum=1.313;Map20=1;OAnc=T;QD=34.73;ReadPosRankSum=1.470;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=365;mSC=0.001;pSC=0.456	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:99:2290,113,0:0,0:33,28:0,0:4,0:0:38.07:0;1/1:42:99:1670,126,0:0,0:23,19:0,0:0,0:0:37.00:0	+
14_64656954_A/C	14	64656954	C	ENSG00000054654	ENST00000261678	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	17644	17644	5882	S/R	Agt/Cgt	-	ENSP=ENSP00000261678;PolyPhen=unknown(0);HGNC=SYNE2	A	C/C,C/C	A	A	A	N/N,N/N	.	1	.	4.4	0.935	0.881	404	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.274;CAnc=A;DP=103;Dels=0.00;FS=4.523;GAnc=A;GRP=4.4;HRun=0;HaplotypeScore=3.9992;MQ=38.27;MQ0=0;MQRankSum=-1.681;Map20=1;OAnc=A;QD=36.80;ReadPosRankSum=-0.560;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=404;mSC=0.935;pSC=0.881	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:70:99:2609,160,0:0,1:44,23:0,0:1,1:0:38.27:0;1/1:33:99:1276,99,0:0,0:15,18:0,0:0,0:0:37.00:0	+
14_64692067_C/T	14	64692067	T	ENSG00000054654	ENST00000261678	Transcript	NON_SYNONYMOUS_CODING	20260	20260	6754	L/F	Ctt/Ttt	-	ENSP=ENSP00000261678;PolyPhen=unknown(0);HGNC=SYNE2	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	5.99	1.000	0.224	382	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=44;Dels=0.00;FS=0.000;GAnc=C;GRP=5.99;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=38.46;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=382;mSC=1.000;pSC=0.224	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:84.27:1110,84,0:0,0:0,0:0,0:16,12:0:37.00:0;1/1:16:48.16:633,48,0:0,0:0,0:0,0:5,11:0:37.00:0	+
14_64749505_C/T	14	64749505	T	ENSG00000140009	ENST00000267525	Transcript	NON_SYNONYMOUS_CODING	667	199	67	G/S	Ggt/Agt	-	ENSP=ENSP00000267525;PolyPhen=benign(0.034);SIFT=tolerated(0.84);HGNC=ESR2	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	2.74	0.086	0.167	412	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=81;Dels=0.00;FS=0.000;GAnc=C;GRP=2.74;HRun=2;HaplotypeScore=0.0000;MQ=37.61;MQ0=0;Map20=1;OAnc=C;QD=37.77;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=412;mSC=0.086;pSC=0.167	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1884,144,0:0,0:0,0:0,0:27,22:0:37.61:0;1/1:32:96.31:1268,96,0:0,0:0,0:0,0:9,23:0:37.00:0	-
14_65249066_C/T	14	65249066	T	ENSG00000070182	ENST00000335612	Transcript	NON_SYNONYMOUS_CODING	4262	560	187	R/Q	cGg/cAg	-	ENSP=ENSP00000334218;PolyPhen=benign(0.01);SIFT=tolerated(1);HGNC=SPTB	C	T/T,T/T	C	C	C	N/N,N/N	rs17180350	0.96	CpG	4.47	0.229	0.891	496	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.05;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=65;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=C;GRP=4.47;HRun=0;HaplotypeScore=0.0000;MQ=37.73;MQ0=0;Map20=1;OAnc=C;QD=36.96;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=496;mSC=0.229;pSC=0.891	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1548,117,0:0,0:0,0:0,0:17,24:0:37.73:0;1/1:24:72.24:960,72,0:0,0:0,0:0,0:12,12:0:37.00:0	-
14_77294729_C/T	14	77294729	T	ENSG00000100565	ENST00000216453	Transcript	NON_SYNONYMOUS_CODING	55	55	19	R/W	Cgg/Tgg	-	ENSP=ENSP00000216453;PolyPhen=unknown(0);HGNC=C14orf166B	C	T/T,T/T	C	C	C	N/N,N/N	rs117254981	0.99	CpG	-7.45	0.000	0.184	761	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=85;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=-7.45;HRun=0;HaplotypeScore=0.0000;MQ=37.40;MQ0=0;Map20=1;OAnc=C;QD=37.29;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=761;mSC=0.000;pSC=0.184	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1897,147,0:0,0:0,0:0,0:23,27:0:37.40:0;1/1:35:35.71:1236,36,0:0,0:2,0:0,0:18,15:0:37.00:0	+
14_88904567_G/A	14	88904567	A	ENSG00000042317	ENST00000356583	Transcript	NON_SYNONYMOUS_CODING	1680	1505	502	R/Q	cGg/cAg	-	ENSP=ENSP00000348991;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=SPATA7	G	A/A,A/A	G	G	A	N/N,N/N	rs10139784	0.96	CpG	-0.0542	0.372	0.847	378	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.15;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=96;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.0542;HRun=0;HaplotypeScore=0.9997;MQ=38.64;MQ0=0;Map20=1;OAnc=A;QD=38.15;TS=HPGOMC;TSseq=G,A,G,A,A,A;UR;bSC=378;mSC=0.372;pSC=0.847	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2093,160,0:30,23:0,0:0,0:0,0:0:38.64:0;1/1:42:99:1664,126,0:22,20:0,0:0,0:0,0:0:37.00:0	+
14_89171861_T/C	14	89171861	C	ENSG00000165521	ENST00000352093	Transcript	NON_SYNONYMOUS_CODING	2146	1897	633	I/V	Att/Gtt	-	ENSP=ENSP00000298315;PolyPhen=benign(0.429);SIFT=tolerated(0.46);HGNC=EML5	T	C/C,C/C	T	T	T	N/N,N/N	rs144622692	1.0	.	5.27	1.000	0.972	263	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;BaseQRankSum=-1.368;CAnc=T;DP=81;Dels=0.00;FS=3.409;GAnc=T;GRP=5.27;HRun=0;HaplotypeScore=0.9997;MQ=37.53;MQ0=0;MQRankSum=-1.428;Map20=1;OAnc=T;QD=37.23;ReadPosRankSum=0.091;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=263;mSC=1.000;pSC=0.972	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2155,132,0:0,0:31,25:0,0:0,1:0:37.53:0;1/1:24:72.24:952,72,0:0,0:10,14:0,0:0,0:0:37.00:0	-
14_91739108_C/G	14	91739108	G	ENSG00000015133	ENST00000331194	Transcript	NON_SYNONYMOUS_CODING	1781	1520	507	G/A	gGt/gCt	-	ENSP=ENSP00000330332;PolyPhen=possibly_damaging(0.526);SIFT=tolerated(0.33);HGNC=CCDC88C	C	G/G,G/G	C	C	C	N/N,N/N	rs45542736	0.99	.	2.73	0.647	0.429	768	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;BaseQRankSum=0.542;CAnc=C;DP=50;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=2.73;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=-1.083;Map20=1;OAnc=C;QD=35.79;ReadPosRankSum=-0.758;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=768;mSC=0.647;pSC=0.429	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:56.30:1178,56,0:0,0:0,1:16,15:0,0:0:37.00:0;1/1:18:54.15:673,54,0:0,0:0,0:8,10:0,0:0:36.44:0	-
14_99988570_C/G	14	99988570	G	ENSG00000205476	ENST00000380243	Transcript	NON_SYNONYMOUS_CODING	942	875	292	G/A	gGc/gCc	-	ENSP=ENSP00000369592;PolyPhen=benign(0.134);SIFT=tolerated(0.8);HGNC=CCDC85C	C	G/G,G/G	C	-	C	N/N,N/N	rs75827961	0.93	.	3.87	0.037	0.485	906	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.25;AMR_AF=0.04;AN=4;ASN_AF=0.01;BaseQRankSum=-0.217;CAnc=C;DP=72;Dels=0.00;EUR_AF=0.01;FS=3.590;GRP=3.87;HRun;HaplotypeScore=0.9973;MQ=38.24;MQ0=0;MQRankSum=-0.505;Map20=1;OAnc=C;QD=37.02;ReadPosRankSum=0.144;TS=HPOMC;TSseq=C,C,C,C,C;bSC=906;mSC=0.037;pSC=0.485	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1810,104,0:0,0:0,1:27,20:0,0:0:38.24:0;1/1:24:69.22:906,69,0:0,0:0,0:11,13:0,0:0:37.00:0	-
15_22866927_T/C	15	22866927	C	ENSG00000153575	ENST00000283645	Transcript	NON_SYNONYMOUS_CODING	2574	2444	815	L/S	tTg/tCg	-	ENSP=ENSP00000283645;PolyPhen=benign(0.005);SIFT=tolerated(0.5);HGNC=TUBGCP5	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	2.38	0.993	0.970	748	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.293;CAnc=T;DP=106;Dels=0.00;FS=0.000;GAnc=T;GRP=2.38;HRun=0;HaplotypeScore=2.7270;MQ=38.33;MQ0=0;MQRankSum=-0.185;Map20=1;OAnc=T;QD=33.67;ReadPosRankSum=-1.416;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=748;mSC=0.993;pSC=0.970	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:67:73.87:2289,74,0:0,0:39,22:0,0:3,1:0:38.33:0;1/1:39:74.36:1417,74,0:0,0:18,20:0,0:0,1:0:37.00:0	+
15_27775836_G/A	15	27775836	A	ENSG00000182256	ENST00000451330	Transcript	NON_SYNONYMOUS_CODING	487	488	163	R/K	aGa/aAa	-	ENSP=ENSP00000390708;PolyPhen=unknown(0);SIFT=tolerated(0.35);HGNC=GABRG3	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	3.01	0.009	0.318	924	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.525;CAnc=G;DP=77;Dels=0.00;FS=0.000;GAnc=G;GRP=3.01;HRun;HaplotypeScore=1.9964;MQ=39.90;MQ0=0;MQRankSum=-0.693;Map20=1;OAnc=G;QD=36.68;ReadPosRankSum=-0.693;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=924;mSC=0.009;pSC=0.318	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1867,120,0:31,16:0,0:0,0:0,0:0:39.90:0;1/1:27:81.26:1064,81,0:14,13:0,0:0,0:0,0:0:37.00:0	+
15_40675443_G/T	15	40675443	T	ENSG00000128944	ENST00000249776	Transcript	NON_SYNONYMOUS_CODING	339	224	75	R/L	cGc/cTc	-	ENSP=ENSP00000249776;PolyPhen=benign(0.102);SIFT=deleterious(0.04);HGNC=C15orf23	G	T/T,T/T	G	G	G	N/N,N/N	rs7169404	0.94	CpG	0.511	0.000	0.268	352	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AMR_AF=0.10;AN=4;ASN_AF=0.02;BaseQRankSum=0.333;CAnc=G;CpG;DP=86;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=G;GRP=0.511;HRun=0;HaplotypeScore=2.9874;MQ=37.92;MQ0=0;MQRankSum=1.666;Map20=1;OAnc=G;QD=35.69;ReadPosRankSum=0.666;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=352;mSC=0.000;pSC=0.268	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:1960,124,0:0,0:0,0:0,1:25,28:0:37.92:0;1/1:32:96.31:1269,96,0:0,0:0,0:0,0:14,18:0:37.00:0	+
15_40675493_C/T	15	40675493	T	ENSG00000128944	ENST00000249776	Transcript	NON_SYNONYMOUS_CODING	389	274	92	P/S	Ccc/Tcc	-	ENSP=ENSP00000249776;PolyPhen=benign(0.004);SIFT=tolerated(0.86);HGNC=C15orf23	C	T/T,T/T	C	C	C	N/N,N/N	rs7169262	0.94	.	-1.78	0.000	0.105	352	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AMR_AF=0.10;AN=4;ASN_AF=0.02;CAnc=C;DP=64;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=C;GRP=-1.78;HRun=0;HaplotypeScore=0.0000;MQ=37.71;MQ0=0;Map20=1;OAnc=C;QD=36.61;TS=HPGOMC;TSseq=C,C,C,C,G,A;bSC=352;mSC=0.000;pSC=0.105	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1571,120,0:0,0:0,0:0,0:21,19:0:37.71:0;1/1:22:66.21:872,66,0:0,0:0,0:0,0:12,10:0:37.00:0	+
15_42114219_G/A	15	42114219	A	ENSG00000137802	ENST00000221214	Transcript	NON_SYNONYMOUS_CODING	2877	2591	864	S/N	aGc/aAc	-	ENSP=ENSP00000221214;PolyPhen=benign(0.343);SIFT=tolerated(0.42);HGNC=MAPKBP1	G	A/A,A/A	G	-	G	N/N,N/N	.	1	.	.	.	.	.	.	AC=4;AF=1.00;AN=4;BaseQRankSum=0.433;CAnc=G;DP=61;Dels=0.00;FS=3.010;HRun;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-1.733;OAnc=G;QD=35.19;ReadPosRankSum=-0.520;TS=HPOMC;TSseq=G,-,G,G,G	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:80.39:1511,80,0:20,21:0,0:0,1:0,0:0:37.00:0;1/1:19:57.19:754,57,0:13,6:0,0:0,0:0,0:0:37.00:0	+
15_42980983_G/A	15	42980983	A	ENSG00000159433	ENST00000290607	Transcript	NON_SYNONYMOUS_CODING	7264	7207	2403	A/T	Gca/Aca	-	ENSP=ENSP00000290607;PolyPhen=possibly_damaging(0.713);SIFT=tolerated(0.23);HGNC=STARD9	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	2.91	0.000	0.174	18	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=58;Dels=0.00;FS=0.000;GAnc=G;GRP=2.91;HRun=0;HaplotypeScore=1.9576;MQ=39.37;MQ0=0;Map20=1;OAnc=G;QD=38.03;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=18;mSC=0.000;pSC=0.174	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1440,111,0:21,16:0,0:0,0:0,0:0:39.37:0;1/1:21:63.20:823,63,0:11,10:0,0:0,0:0,0:0:37.00:0	+
15_42982096_C/A	15	42982096	A	ENSG00000159433	ENST00000290607	Transcript	NON_SYNONYMOUS_CODING	8377	8320	2774	P/T	Cct/Act	-	ENSP=ENSP00000290607;PolyPhen=possibly_damaging(0.867);SIFT=tolerated(0.17);HGNC=STARD9	C	A/A,A/A	C	C	C	N/N,N/N	.	1	.	-1.97	0.002	0.217	17	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-1.732;CAnc=C;DP=78;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.97;HRun=0;HaplotypeScore=1.9662;MQ=36.79;MQ0=0;MQRankSum=-1.275;Map20=1;OAnc=C;QD=35.67;ReadPosRankSum=1.144;TS=HPGOMC;TSseq=C,C,C,C,G,C;UR;bSC=17;mSC=0.002;pSC=0.217	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:1959,119,0:30,23:1,0:0,0:0,0:0:36.79:0;1/1:24:72.22:925,72,0:8,16:0,0:0,0:0,0:0:37.00:0	+
15_42985804_G/A	15	42985804	A	ENSG00000159433	ENST00000290607	Transcript	NON_SYNONYMOUS_CODING	12085	12028	4010	G/R	Ggg/Agg	-	ENSP=ENSP00000290607;PolyPhen=probably_damaging(0.981);SIFT=deleterious(0.02);HGNC=STARD9	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	-10.1	0.000	0.009	18	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=68;Dels=0.00;FS=0.000;GAnc=G;GRP=-10.1;HRun=0;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;OAnc=G;QD=36.94;TS=HPGOMC;TSseq=G,G,G,A,G,G;bSC=18;mSC=0.000;pSC=0.009	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1659,126,0:20,24:0,0:0,0:0,0:0:37.68:0;1/1:24:72.23:935,72,0:14,10:0,0:0,0:0,0:0:37.00:0	+
15_42987369_A/G	15	42987369	G	ENSG00000159433	ENST00000290607	Transcript	NON_SYNONYMOUS_CODING	13051	12994	4332	T/A	Aca/Gca	-	ENSP=ENSP00000290607;PolyPhen=possibly_damaging(0.51);SIFT=deleterious(0.05);HGNC=STARD9	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	0.354	0.000	0.003	18	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=75;Dels=0.00;FS=0.000;GAnc=A;GRP=0.354;HRun=0;HaplotypeScore=0.9997;MQ=38.41;MQ0=0;Map20=1;OAnc=A;QD=38.41;TS=HPGOMC;TSseq=A,A,A,A,C,C;bSC=18;mSC=0.000;pSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1646,126,0:0,0:0,0:20,21:0,0:0:38.41:0;1/1:33:96.31:1265,96,0:0,0:0,0:12,21:0,0:0:37.00:0	+
15_44630097_A/C	15	44630097	C	ENSG00000166734	ENST00000299957	Transcript	NON_SYNONYMOUS_CODING	1012	713	238	H/P	cAt/cCt	-	ENSP=ENSP00000299957;PolyPhen=benign(0.195);SIFT=tolerated(0.26);HGNC=CASC4	A	C/C,C/C	A	A	A	N/N,N/N	rs144496050	1.0	.	3.05	1.000	0.840	142	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=0.686;CAnc=A;DP=79;Dels=0.00;FS=0.000;GAnc=A;GRP=3.05;HRun;HaplotypeScore=0.9832;MQ=40.26;MQ0=0;MQRankSum=-0.033;Map20=1;OAnc=A;QD=34.44;ReadPosRankSum=0.425;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=142;mSC=1.000;pSC=0.840	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1858,119,0:0,1:23,29:0,0:0,0:0:40.26:0;1/1:26:78.21:953,78,0:0,0:15,11:0,0:0,0:0:34.28:0	+
15_49907355_C/T	15	49907355	T	ENSG00000166262	ENST00000299338	Transcript	NON_SYNONYMOUS_CODING	318	14	5	R/Q	cGa/cAa	-	ENSP=ENSP00000299338;PolyPhen=benign(0);SIFT=tolerated(0.5);HGNC=C15orf33	C	T/T,T/T	C	C	C	N/N,N/N	rs151268951	1.0	CpG	-7.62	0.000	0.057	385	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=0.533;CAnc=C;CpG;DP=89;Dels=0.00;FS=3.039;GAnc=C;GRP=-7.62;HRun=2;HaplotypeScore=0.9997;MQ=37.00;MQ0=0;MQRankSum=-1.683;Map20=1;OAnc=C;QD=35.37;ReadPosRankSum=-0.661;TS=HPGOMC;TSseq=C,C,C,C,-,T;UR;bSC=385;mSC=0.000;pSC=0.057	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:94.55:2120,95,0:0,0:0,2:0,0:27,30:0:37.00:0;1/1:30:90.29:1188,90,0:0,0:0,0:0,0:14,16:0:37.00:0	-
15_51676020_T/G	15	51676020	G	ENSG00000186417	ENST00000335449	Transcript	NON_SYNONYMOUS_CODING	528	472	158	L/V	Ttg/Gtg	-	ENSP=ENSP00000335196;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=GLDN	T	G/G,G/G	T	T	T	N/N,N/N	rs77970795	0.97	.	3.39	0.538	0.812	654	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.04;AN=4;ASN_AF=0.08;CAnc=T;DP=60;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=3.39;HRun=0;HaplotypeScore=1.9944;MQ=38.91;MQ0=0;Map20=1;OAnc=T;QD=38.39;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=654;mSC=0.538;pSC=0.812	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1607,123,0:0,0:0,0:15,23:0,0:0:38.91:0;1/1:19:57.17:721,57,0:0,0:0,0:11,8:0,0:0:37.00:0	+
15_57524982_G/A	15	57524982	A	ENSG00000140262	ENST00000267811	Transcript	NON_SYNONYMOUS_CODING	1202	898	300	G/S	Ggc/Agc	-	ENSP=ENSP00000267811;PolyPhen=benign(0.042);SIFT=tolerated(0.67);HGNC=TCF12	G	A/A,A/A	G	G	G	N/N,N/N	rs12442879	0.96	CpG	1.49	0.001	0.347	350	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AMR_AF=0.20;AN=4;CAnc=G;CpG;DP=77;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=1.49;HRun=0;HaplotypeScore=2.8316;MQ=38.44;MQ0=0;Map20=1;OAnc=G;QD=37.90;TS=HPGOM;TSseq=G,G,A,G,G;UR;bSC=350;mSC=0.001;pSC=0.347	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1587,120,0:19,21:0,0:0,1:0,0:0:38.44:0;1/1:36:99:1385,105,0:18,17:1,0:0,0:0,0:0:37.00:0	+
15_68118032_C/T	15	68118032	T	ENSG00000188779	ENST00000380035	Transcript	NON_SYNONYMOUS_CODING	150	92	31	A/V	gCc/gTc	-	ENSP=ENSP00000369374;PolyPhen=benign(0.002);SIFT=deleterious(0.01);HGNC=SKOR1	C	T/T,T/T	C	C	C	N/N,N/N	rs116336781	0.98	.	2.53	0.008	0.057	538	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AN=4;CAnc=C;DP=83;Dels=0.00;FS=0.000;GAnc=C;GRP=2.53;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.56;TS=HPGOMC;TSseq=C,C,C,C,A,C;UR;bSC=538;mSC=0.008;pSC=0.057	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1986,150,0:0,0:0,0:0,0:26,26:0:37.00:0;1/1:31:93.29:1199,93,0:0,0:0,0:0,0:20,11:0:37.00:0	+
15_73615670_C/T	15	73615670	T	ENSG00000138622	ENST00000261917	Transcript	NON_SYNONYMOUS_CODING	3758	2764	922	D/N	Gac/Aac	-	ENSP=ENSP00000261917;PolyPhen=unknown(0);SIFT=tolerated(0.29);HGNC=HCN4	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	2.93	.	0.417	583	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=43;Dels=0.00;FS=0.000;GAnc=C;GRP=2.93;HRun;HaplotypeScore=0.0000;MQ=37.96;MQ0=0;Map20=1;OAnc=C;QD=39.09;TS=HPGOM;TSseq=C,C,C,-,C;UR;bSC=583;pSC=0.417	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.31:1245,93,0:0,0:0,0:0,0:16,15:0:37.96:0;1/1:12:36.12:480,36,0:0,0:0,0:0,0:6,6:0:37.00:0	-
15_74337218_G/T	15	74337218	T	ENSG00000140464	ENST00000268058	Transcript	NON_SYNONYMOUS_CODING	2614	2518	840	A/S	Gct/Tct	-	ENSP=ENSP00000268058;PolyPhen=benign(0.013);SIFT=tolerated(0.09);HGNC=PML	G	T/T,T/T	G	G	G	N/N,N/N	.	1.0	.	-1.72	0.000	0.107	789	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;DP=67;Dels=0.00;FS=0.000;GAnc=G;GRP=-1.72;HRun;HaplotypeScore=0.9997;MQ=38.24;MQ0=0;Map20=1;OAnc=G;QD=39.14;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=789;mSC=0.000;pSC=0.107	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1912,144,0:0,0:0,0:0,0:26,22:0:38.24:0;1/1:19:57.18:750,57,0:0,0:0,0:0,0:10,9:0:37.00:0	+
15_89173292_G/A	15	89173292	A	ENSG00000181026	ENST00000332810	Transcript	NON_SYNONYMOUS_CODING	896	745	249	G/S	Ggc/Agc	-	ENSP=ENSP00000331944;PolyPhen=possibly_damaging(0.84);SIFT=tolerated(0.11);HGNC=AEN	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	5.63	0.774	0.182	856	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=54;Dels=0.00;FS=0.000;GAnc=G;GRP=5.63;HRun=0;HaplotypeScore=0.0000;MQ=38.90;MQ0=0;Map20=1;OAnc=G;QD=37.10;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=856;mSC=0.774;pSC=0.182	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:90.29:1183,90,0:22,9:0,0:0,0:0,0:0:38.90:0;1/1:23:69.22:904,69,0:14,9:0,0:0,0:0,0:0:37.00:0	+
15_89388894_A/G	15	89388894	G	ENSG00000157766	ENST00000268134	Transcript	NON_SYNONYMOUS_CODING	1584	1210	404	I/V	Atc/Gtc	-	ENSP=ENSP00000268134;PolyPhen=benign(0.13);SIFT=tolerated(0.23);HGNC=ACAN	A	G/G,G/G	A	A	A	N/N,N/N	rs148070768	1.0	.	-3.01	0.059	0.081	712	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=A;DP=56;Dels=0.00;FS=0.000;GAnc=A;GRP=-3.01;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.68;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=712;mSC=0.059;pSC=0.081	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:99:1310,99,0:0,0:0,0:17,16:0,0:0:37.00:0;1/1:23:69.21:892,69,0:0,0:0,0:10,13:0,0:0:37.00:0	+
15_90039643_T/C	15	90039643	C	ENSG00000140519	ENST00000268122	Transcript	NON_SYNONYMOUS_CODING	202	133	45	T/A	Acg/Gcg	-	ENSP=ENSP00000268122;PolyPhen=benign(0.002);SIFT=tolerated(0.63);HGNC=RHCG	T	C/C,C/C	T	T	T	N/N,N/N	rs117284582	0.98	.	-5.48	0.000	0.001	834	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.05;AN=4;ASN_AF=0.04;CAnc=T;DP=69;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=-5.48;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.53;TS=HPGOMC;TSseq=T,T,T,T,T,C;bSC=834;mSC=0.000;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1728,132,0:0,0:21,23:0,0:0,0:0:37.00:0;1/1:25:75.24:970,75,0:0,0:13,12:0,0:0,0:0:37.00:0	-
15_90169281_A/G	15	90169281	G	ENSG00000140534	ENST00000268138	Transcript	NON_SYNONYMOUS_CODING	5696	5591	1864	K/R	aAa/aGa	-	ENSP=ENSP00000268138;PolyPhen=benign(0.151);SIFT=tolerated(0.11);HGNC=C15orf42	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-9.77	0.000	0.296	461	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=67;Dels=0.00;FS=0.000;GAnc=A;GRP=-9.77;HRun=0;HaplotypeScore=1.9995;MQ=38.35;MQ0=0;Map20=1;OAnc=A;QD=38.33;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=461;mSC=0.000;pSC=0.296	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1719,132,0:0,0:0,0:20,23:0,0:0:38.35:0;1/1:23:69.22:891,69,0:0,0:0,0:10,13:0,0:0:37.00:0	+
15_98995081_A/G	15	98995081	G	ENSG00000185087	ENST00000332908	Transcript	NON_SYNONYMOUS_CODING	424	343	115	P/S	Ccg/Tcg	-	ENSP=ENSP00000332615;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=FAM169B	G	A/A,A/A	G	G	G	N/N,N/N	rs12101356	0.92	.	4.69	0.042	0.088	963	1	1000gALT=G;AC=0;AF=0.00;AF1000g=0.92;AFR_AF=0.80;AMR_AF=0.96;AN=4;ASN_AF=0.99;CAnc=G;DP=71;EUR_AF=0.94;GAnc=G;GRP=4.69;MQ=39.92;MQ0=0;Map20=1;OAnc=G;TS=HPGOC;TSseq=A,G,G,G,G;UR;bSC=963;mSC=0.042;pSC=0.088	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:46:99:0,138,1832:24,22:0,0:0,0:0,0:0:39.92:0;0/0:25:75.25:0,75,1025:13,12:0,0:0,0:0,0:0:39.91:0	-
15_101551007_C/A	15	101551007	A	ENSG00000154237	ENST00000284395	Transcript	NON_SYNONYMOUS_CODING	1637	1237	413	L/M	Ctg/Atg	-	ENSP=ENSP00000284395;PolyPhen=probably_damaging(0.999);SIFT=deleterious(0.01);HGNC=LRRK1	C	A/A,A/A	C	C	C	N/N,N/N	rs55739947	0.99	.	2.05	0.659	0.418	862	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AMR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=C;DP=67;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=2.05;HRun=0;HaplotypeScore=1.9877;MQ=37.71;MQ0=0;Map20=1;OAnc=C;QD=38.70;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=862;mSC=0.659;pSC=0.418	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1658,126,0:18,23:0,0:0,0:0,0:0:37.71:0;1/1:25:75.25:999,75,0:16,9:0,0:0,0:0,0:0:37.00:0	+
16_460274_C/T	16	460274	T	ENSG00000242612	ENST00000397710	Transcript	NON_SYNONYMOUS_CODING	662	556	186	R/C	Cgc/Tgc	-	ENSP=ENSP00000380822;PolyPhen=possibly_damaging(0.88);SIFT=deleterious(0);HGNC=DECR2	C	T/T,T/T	C	C	C	N/N,N/N	rs116164566	0.99	CpG	-8.58	.	0.647	809	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;BaseQRankSum=-1.186;CAnc=C;CpG;DP=71;Dels=0.00;FS=3.006;GAnc=C;GRP=-8.58;HRun=0;HaplotypeScore=0.9992;MQ=39.34;MQ0=0;MQRankSum=1.871;Map20=1;OAnc=C;QD=31.87;ReadPosRankSum=-1.713;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=809;pSC=0.647	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:58.41:1626,58,0:0,0:2,0:0,0:27,20:0:39.34:0;1/1:21:60.17:766,60,0:0,0:0,0:0,0:16,5:0:37.00:0	+
16_597082_G/C	16	597082	C	ENSG00000103326	ENST00000219611	Transcript	NON_SYNONYMOUS_CODING	607	244	82	V/L	Gtc/Ctc	-	ENSP=ENSP00000219611;PolyPhen=benign(0.01);SIFT=tolerated(0.11);HGNC=SOLH	G	C/C,C/C	G	G	G	N/N,N/N	.	1	.	.	.	.	.	.	AC=4;AF=1.00;AN=4;CAnc=G;DP=53;Dels=0.00;FS=0.000;GAnc=G;HRun=0;HaplotypeScore=0.0000;MQ=36.75;MQ0=0;OAnc=G;QD=38.45;TS=HPGOMC;TSseq=G,-,G,G,G,G	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1610,123,0:0,0:22,18:0,0:0,0:0:36.75:0;1/1:12:36.10:465,36,0:0,0:4,8:0,0:0,0:0:37.00:0	+
16_597764_G/A	16	597764	A	ENSG00000103326	ENST00000219611	Transcript	NON_SYNONYMOUS_CODING	1289	926	309	R/H	cGc/cAc	-	ENSP=ENSP00000219611;PolyPhen=benign(0.001);SIFT=tolerated(0.29);HGNC=SOLH	G	A/A,A/A	G	G	G	N/N,N/N	rs74988150	0.97	CpG	.	.	.	.	.	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.08;AMR_AF=0.01;AN=4;ASN_AF=0.02;CAnc=G;CpG;DP=43;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;OAnc=G;QD=33.97;TS=HPGOMC;TSseq=G,-,G,G,G,G	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:84.28:1120,84,0:17,15:0,0:0,0:0,0:0:37.00:0;1/1:11:33.11:440,33,0:2,9:0,0:0,0:0,0:0:37.00:0	+
16_602672_C/T	16	602672	T	ENSG00000103326	ENST00000397687	Transcript	STOP_GAINED	1141	1141	381	Q/*	Cag/Tag	-	ENSP=ENSP00000380802;HGNC=SOLH	C	T/T,T/T	C	C	C	N/N,N/N	rs79942802	0.97	.	.	.	.	830	.	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.10;AN=4;ASN_AF=0.07;CAnc=C;DP=57;Dels=0.00;FS=0.000;GAnc=C;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;OAnc=C;QD=37.84;TS=HPGOMC;TSseq=C,-,C,C,C,C;bSC=830	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1471,111,0:0,0:0,0:0,0:23,15:0:37.00:0;1/1:19:57.18:741,57,0:0,0:0,0:0,0:6,13:0:37.00:0	+
16_1370597_G/C	16	1370597	C	ENSG00000103275	ENST00000402301	Transcript	NON_SYNONYMOUS_CODING	528	492	164	S/R	agC/agG	-	ENSP=ENSP00000384361;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=UBE2I	C	G/G,G/G	C	C	C	N/N,N/N	rs4017786	0.94	.	-1.26	0.000	0.066	835	1	1000gALT=C;AC=0;AF=0.00;AF1000g=0.94;AFR_AF=0.97;AMR_AF=0.91;AN=4;ASN_AF=1.00;CAnc=C;DP=51;EUR_AF=0.88;GAnc=C;GRP=-1.26;MQ=38.55;MQ0=0;Map20=1;OAnc=C;TS=HPGOMC;TSseq=G,C,C,C,C,C;bSC=835;mSC=0.000;pSC=0.066	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:38:99:0,114,1470:0,0:0,0:26,11:0,0:0:38.55:0;0/0:13:39.12:0,39,503:0,0:0,0:6,7:0,0:0:37.00:0	+
16_1370614_C/G	16	1370614	G	ENSG00000103275	ENST00000402301	Transcript	NON_SYNONYMOUS_CODING	545	509	170	R/T	aGg/aCg	-	ENSP=ENSP00000384361;PolyPhen=unknown(0);SIFT=tolerated(1);HGNC=UBE2I	G	C/C,C/C	G	G	G	N/N,N/N	rs8063770	0.94	CpG	0.633	0.000	0.047	835	1	1000gALT=G;AC=0;AF=0.00;AF1000g=0.94;AFR_AF=0.98;AMR_AF=0.91;AN=4;ASN_AF=1.00;CAnc=G;CpG;DP=56;EUR_AF=0.88;GAnc=G;GRP=0.633;MQ=38.41;MQ0=0;Map20=1;OAnc=G;TS=HPGOMC;TSseq=C,G,G,G,G,G;bSC=835;mSC=0.000;pSC=0.047	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	0/0:42:99:0,123,1592:0,0:21,19:0,0:1,0:0:38.41:0;0/0:14:42.13:0,42,540:0,0:7,7:0,0:0,0:0:37.00:0	+
16_1616201_C/T	16	1616201	T	ENSG00000187535	ENST00000426508	Transcript	NON_SYNONYMOUS_CODING	2226	1862	621	R/Q	cGg/cAg	-	ENSP=ENSP00000406012;PolyPhen=benign(0.001);SIFT=tolerated(0.75);HGNC=IFT140	C	T/T,T/T	C	C	C	N/N,N/N	rs11648609	0.92	CpG	-8.21	0.000	0.026	549	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.01;AMR_AF=0.15;AN=4;ASN_AF=0.14;CAnc=C;CpG;DP=95;Dels=0.01;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-8.21;HRun=0;HaplotypeScore=0.0000;MQ=37.60;MQ0=0;Map20=1;OAnc=C;QD=37.54;TS=HPGOMC;TSseq=C,C,C,C,C,T;bSC=549;mSC=0.000;pSC=0.026	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1910,144,0:0,0:0,0:0,0:19,31:0:37.60:0;1/1:44:99:1722,132,0:0,0:0,0:0,0:25,19:0:37.00:0	-
16_2030127_G/A	16	2030127	A	ENSG00000196408	ENST00000354249	Transcript	NON_SYNONYMOUS_CODING	824	454	152	L/F	Ctc/Ttc	-	ENSP=ENSP00000346195;PolyPhen=possibly_damaging(0.699);SIFT=tolerated(0.09);HGNC=NOXO1	G	A/A,A/A	G	G	G	N/N,N/N	rs61729118	0.93	.	3.09	0.001	0.239	671	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.01;AMR_AF=0.13;AN=4;ASN_AF=0.03;CAnc=G;DP=63;Dels=0.00;EUR_AF=0.11;FS=0.000;GAnc=G;GRP=3.09;HRun;HaplotypeScore=3.9989;MQ=36.77;MQ0=0;Map20=1;OAnc=G;QD=37.80;TS=HPGOM;TSseq=G,G,G,G,G;bSC=671;mSC=0.001;pSC=0.239	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1659,126,0:20,22:0,0:0,0:0,0:0:36.77:0;1/1:20:60.20:800,60,0:12,8:0,0:0,0:0,0:0:37.00:0	-
16_2871452_G/A	16	2871452	A	ENSG00000007038	ENST00000005995	Transcript	NON_SYNONYMOUS_CODING	833	791	264	R/Q	cGg/cAg	-	ENSP=ENSP00000005995;PolyPhen=possibly_damaging(0.634);SIFT=tolerated(0.13);HGNC=PRSS21	G	A/A,A/A	G	G	G	N/N,N/N	rs2072273	0.97	CpG	.	.	.	.	.	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.03;AN=4;ASN_AF=0.08;CAnc=G;CpG;DP=69;Dels=0.00;FS=0.000;GAnc=G;HRun=0;HaplotypeScore=0.9665;MQ=37.00;MQ0=0;OAnc=G;QD=34.95;TS=HPGO;TSseq=G,-,G,-	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1711,129,0:26,22:0,0:0,0:0,0:0:37.00:0;1/1:21:63.21:840,63,0:10,11:0,0:0,0:0,0:0:37.00:0	+
16_3594296_C/T	16	3594296	T	ENSG00000167984	ENST00000574758	Transcript	NON_SYNONYMOUS_CODING	2947	2947	983	V/M	Gtg/Atg	-	ENSP=ENSP00000461099;PolyPhen=unknown(0);HGNC=NLRC3	C	T/T,T/T	C	C	C	N/N,N/N	rs35402060	0.94	CpG	-10.3	0.000	0.296	587	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.06;AMR_AF=0.06;AN=4;ASN_AF=0.05;CAnc=C;CpG;DP=64;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=-10.3;HRun=0;HaplotypeScore=0.9933;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.90;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=587;mSC=0.000;pSC=0.296	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1657,126,0:0,0:0,0:0,0:24,18:0:37.00:0;1/1:20:60.19:788,60,0:0,0:0,0:0,0:13,7:0:37.00:0	-
16_3640785_C/T	16	3640785	T	ENSG00000188827	ENST00000294008	Transcript	NON_SYNONYMOUS_CODING	3495	2854	952	A/T	Gcg/Acg	-	ENSP=ENSP00000294008;PolyPhen=benign(0.04);SIFT=tolerated(0.46);HGNC=SLX4	C	T/T,T/T	C	C	C	N/N,N/N	rs59939128	0.93	.	-1.42	0.000	0.053	592	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.11;AMR_AF=0.07;AN=4;ASN_AF=0.03;CAnc=C;DP=55;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=-1.42;HRun=0;HaplotypeScore=0.9947;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.51;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=592;mSC=0.000;pSC=0.053	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1571,120,0:0,0:0,0:0,0:13,27:0:37.00:0;1/1:14:42.14:552,42,0:0,0:0,0:0,0:8,6:0:37.00:0	-
16_4016377_T/C	16	4016377	C	ENSG00000162104	ENST00000294016	Transcript	NON_SYNONYMOUS_CODING	4000	3461	1154	N/S	aAc/aGc	-	ENSP=ENSP00000294016;PolyPhen=benign(0.01);SIFT=tolerated(0.44);HGNC=ADCY9	T	C/C,C/C	T	T	T	N/N,N/N	rs61731445	0.97	.	2.04	1.000	0.777	721	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.08;AN=4;CAnc=T;DP=66;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=T;GRP=2.04;HRun=0;HaplotypeScore=2.9622;MQ=38.27;MQ0=0;Map20=1;OAnc=T;QD=38.23;TS=HPGOMC;TSseq=T,T,T,T,C,T;bSC=721;mSC=1.000;pSC=0.777	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1524,117,0:0,0:19,19:0,0:0,0:0:38.27:0;1/1:27:78.25:1030,78,0:0,0:13,14:0,0:0,0:0:37.00:0	-
16_8829641_G/C	16	8829641	C	ENSG00000183044	ENST00000268251	Transcript	NON_SYNONYMOUS_CODING	233	45	15	Q/H	caG/caC	-	ENSP=ENSP00000268251;PolyPhen=benign(0.142);SIFT=tolerated(0.06);HGNC=ABAT	G	C/C,C/C	G	G	-	N/N,N/N	.	1	.	4.01	0.119	0.848	952	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=4.01;HRun;HaplotypeScore=0.9958;MQ=37.85;MQ0=0;Map20=1;QD=37.40;TS=HPGC;TSseq=G,G,G,G;bSC=952;mSC=0.119;pSC=0.848	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1342,102,0:0,0:19,14:0,0:1,0:0:37.85:0;1/1:17:51.17:673,51,0:0,0:11,6:0,0:0,0:0:37.00:0	+
16_10574813_G/A	16	10574813	A	ENSG00000166669	ENST00000324570	Transcript	NON_SYNONYMOUS_CODING	1560	1560	520	M/I	atG/atA	-	ENSP=ENSP00000322811;PolyPhen=unknown(0);HGNC=ATF7IP2	G	A/A,A/A	G	G	G	N/N,N/N	rs9931441	0.91	.	0.447	0.378	0.026	889	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.20;AMR_AF=0.03;AN=4;ASN_AF=0.12;CAnc=G;DP=90;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=0.447;HRun=0;HaplotypeScore=1.9964;MQ=39.07;MQ0=0;Map20=1;OAnc=G;QD=37.11;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=889;mSC=0.378;pSC=0.026	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1963,150,0:25,25:0,0:0,0:0,0:0:39.07:0;1/1:38:99:1507,114,0:20,18:0,0:0,0:0,0:0:37.00:0	+
16_20809966_T/C	16	20809966	C	ENSG00000196678	ENST00000357967	Transcript	NON_SYNONYMOUS_CODING	1199	1156	386	T/A	Act/Gct	-	ENSP=ENSP00000350651;PolyPhen=benign(0.008);SIFT=deleterious(0.03);HGNC=ERI2	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	3.72	0.996	0.259	143	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=89;Dels=0.00;FS=0.000;GAnc=T;GRP=3.72;HRun=0;HaplotypeScore=0.7340;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.69;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=143;mSC=0.996;pSC=0.259	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1890,144,0:0,0:35,13:0,0:0,0:0:37.00:0;1/1:41:99:1627,123,0:0,0:21,20:0,0:0,0:0:37.00:0	-
16_27300203_A/G	16	27300203	G	ENSG00000245888	ENST00000566854	Transcript	NON_SYNONYMOUS_CODING	306	73	25	T/A	Aca/Gca	-	ENSP=ENSP00000455863;PolyPhen=unknown(0)	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-1.24	0.000	0.604	900	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.124;CAnc=A;DP=88;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.24;HRun=0;HaplotypeScore=0.9997;MQ=41.08;MQ0=0;MQRankSum=1.114;Map20=1;OAnc=A;QD=36.58;ReadPosRankSum=1.114;TS=HPGOMC;TSseq=A,A,A,A,A,N;UR;bSC=900;mSC=0.000;pSC=0.604	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2082,126,0:1,0:0,0:38,17:0,0:0:41.08:0;1/1:32:96.31:1264,96,0:0,0:0,0:22,10:0,0:0:37.00:0	+
16_31477795_G/C	16	31477795	C	ENSG00000140691	ENST00000268314	Transcript	NON_SYNONYMOUS_CODING	2922	2393	798	G/A	gGt/gCt	-	ENSP=ENSP00000268314;PolyPhen=unknown(0);SIFT=tolerated(0.74);HGNC=ARMC5	G	C/C,C/C	G	G	G	N/N,N/N	rs115611533	0.99	.	4.69	.	0.156	319	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;BaseQRankSum=-0.325;CAnc=G;DP=45;Dels=0.00;FS=0.000;GAnc=G;GRP=4.69;HRun=0;HaplotypeScore=0.9867;MQ=37.00;MQ0=0;MQRankSum=1.516;Map20=1;OAnc=G;QD=36.15;ReadPosRankSum=-0.758;TS=HPGOMC;TSseq=G,N,G,N,G,G;bSC=319;pSC=0.156	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:56.31:1190,56,0:0,0:10,20:0,1:0,0:0:37.00:0;1/1:13:39.13:520,39,0:0,0:6,7:0,0:0,0:0:37.00:0	+
16_55559513_G/T	16	55559513	T	ENSG00000087253	ENST00000262134	Transcript	NON_SYNONYMOUS_CODING	449	265	89	V/L	Gta/Tta	-	ENSP=ENSP00000262134;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=LPCAT2	G	T/T,T/T	G	G	G	N/N,N/N	.	0.99	.	3.2	0.105	0.971	742	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;BaseQRankSum=1.541;CAnc=G;DP=76;Dels=0.00;FS=3.010;GAnc=G;GRP=3.2;HRun;HaplotypeScore=1.0000;MQ=38.21;MQ0=0;MQRankSum=-0.379;Map20=1;OAnc=G;QD=35.51;ReadPosRankSum=-0.733;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=742;mSC=0.105;pSC=0.971	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:72.21:1773,72,0:0,0:0,0:0,2:21,26:0:38.21:0;1/1:27:81.26:1048,81,0:0,0:0,0:0,0:13,14:0:37.00:0	+
16_56500132_C/T	16	56500132	T	ENSG00000087263	ENST00000540727	Transcript	NON_SYNONYMOUS_CODING	576	49	17	P/S	Ccc/Tcc	-	ENSP=ENSP00000443875;PolyPhen=benign(0.019);SIFT=tolerated(0.31);HGNC=OGFOD1	C	T/T,T/T	C	C	C	N/N,N/N	rs34883368	0.94	.	-2.46	0.984	0.923	428	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.02;AMR_AF=0.04;AN=4;ASN_AF=0.14;CAnc=C;DP=61;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=-2.46;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=38.16;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=428;mSC=0.984;pSC=0.923	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1445,108,0:0,0:0,0:0,0:18,19:0:37.81:0;1/1:24:72.22:920,72,0:0,0:0,0:0,0:15,9:0:36.04:0	+
16_56536660_T/C	16	56536660	C	ENSG00000125124	ENST00000245157	Transcript	NON_SYNONYMOUS_CODING	1286	865	289	I/V	Att/Gtt	-	ENSP=ENSP00000245157;PolyPhen=benign(0.004);SIFT=tolerated(0.91);HGNC=BBS2	T	C/C,C/C	T	T	T	N/N,N/N	rs150384293	0.99	.	-7.13	0.017	0.936	479	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=T;DP=70;Dels=0.00;FS=0.000;GAnc=T;GRP=-7.13;HRun=0;HaplotypeScore=0.0000;MQ=37.57;MQ0=0;Map20=1;OAnc=T;QD=38.76;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=479;mSC=0.017;pSC=0.936	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:99:1738,132,0:0,0:25,18:0,0:0,0:0:37.57:0;1/1:26:78.25:1023,78,0:0,0:14,12:0,0:0,0:0:37.00:0	-
16_57819479_T/C	16	57819479	C	ENSG00000140859	ENST00000539578	Transcript	NON_SYNONYMOUS_CODING	351	38	13	Q/R	cAg/cGg	-	ENSP=ENSP00000444884;PolyPhen=possibly_damaging(0.767);SIFT=deleterious(0.04);HGNC=KIFC3	T	C/C,C/C	T	T	T	N/N,N/N	rs117391586	0.99	.	2.47	0.999	0.895	729	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.02;CAnc=T;DP=64;Dels=0.00;FS=0.000;GAnc=T;GRP=2.47;HRun=2;HaplotypeScore=0.0000;MQ=38.38;MQ0=0;Map20=1;OAnc=T;QD=37.97;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=729;mSC=0.999;pSC=0.895	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1666,129,0:0,0:20,21:0,0:0,0:0:38.38:0;1/1:21:63.20:821,63,0:0,0:14,7:0,0:0,0:0:37.00:0	-
16_66997136_G/A	16	66997136	A	ENSG00000172828	ENST00000303334	Transcript	NON_SYNONYMOUS_CODING	208	137	46	R/Q	cGg/cAg	-	ENSP=ENSP00000304782;PolyPhen=benign(0.017);SIFT=tolerated(0.28);HGNC=CES3	G	A/A,A/A	G	G	G	N/N,N/N	rs149632209	1.0	CpG	-4.11	.	0.047	162	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=52;Dels=0.00;FS=0.000;GAnc=G;GRP=-4.11;HRun=0;HaplotypeScore=0.9997;MQ=37.73;MQ0=0;Map20=1;OAnc=G;QD=37.90;TS=HPGOMC;TSseq=G,A,G,G,G,-;bSC=162;pSC=0.047	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1587,120,0:22,18:0,0:0,0:0,0:0:37.73:0;1/1:11:33.10:429,33,0:4,7:0,0:0,0:0,0:0:37.00:0	+
16_67267922_A/T	16	67267922	T	ENSG00000135723	ENST00000258201	Transcript	NON_SYNONYMOUS_CODING	1932	1684	562	S/T	Tct/Act	-	ENSP=ENSP00000258201;PolyPhen=benign(0.002);SIFT=tolerated(0.61);HGNC=FHOD1	A	T/T,T/T	A	A	A	N/N,N/N	.	1	.	-1.92	0.403	0.420	23	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.693;CAnc=A;DP=58;Dels=0.00;FS=0.000;GAnc=A;GRP=-1.92;HRun=0;HaplotypeScore=2.5613;MQ=37.00;MQ0=0;MQRankSum=0.116;Map20=1;OAnc=A;QD=33.76;ReadPosRankSum=-1.617;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=23;mSC=0.403;pSC=0.420	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:50.29:1113,50,0:0,1:0,0:0,0:16,15:0:37.00:0;1/1:26:78.26:1035,78,0:0,0:0,0:0,0:17,9:0:37.00:0	-
16_67429116_C/T	16	67429116	T	ENSG00000159714	ENST00000348579	Transcript	NON_SYNONYMOUS_CODING	1361	1019	340	R/H	cGc/cAc	-	ENSP=ENSP00000340299;PolyPhen=benign(0.012);SIFT=tolerated(0.24);HGNC=ZDHHC1	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	2.81	0.003	0.453	20	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=51;Dels=0.00;FS=0.000;GAnc=C;GRP=2.81;HRun=0;HaplotypeScore=1.9995;MQ=37.88;MQ0=0;Map20=1;OAnc=C;QD=34.08;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=20;mSC=0.003;pSC=0.453	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:90.29:1192,90,0:0,0:0,0:0,0:22,12:0:37.88:0;1/1:17:48.14:598,48,0:0,0:0,0:0,0:9,8:0:37.00:0	-
16_70513576_T/A	16	70513576	A	ENSG00000157353	ENST00000288078	Transcript	NON_SYNONYMOUS_CODING	3480	3248	1083	F/Y	tTc/tAc	-	ENSP=ENSP00000288078;PolyPhen=benign(0.004);SIFT=tolerated(0.28);HGNC=FUK	T	A/A,A/A	T	T	T	N/N,N/N	rs180673806	1.0	.	1.55	0.000	0.954	101	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=T;DP=51;Dels=0.00;FS=0.000;GAnc=T;GRP=1.55;HRun=0;HaplotypeScore=0.0000;MQ=38.73;MQ0=0;Map20=1;OAnc=T;QD=35.85;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=101;mSC=0.000;pSC=0.954	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:96.31:1252,96,0:16,17:0,0:0,0:0,0:0:38.73:0;1/1:17:51.16:660,51,0:8,9:0,0:0,0:0,0:0:37.00:0	+
16_75148067_C/T	16	75148067	T	ENSG00000166816	ENST00000300051	Transcript	NON_SYNONYMOUS_CODING	742	695	232	R/H	cGt/cAt	-	ENSP=ENSP00000300051;PolyPhen=benign(0);SIFT=deleterious(0.04);HGNC=LDHD	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	0.18	0.090	0.127	711	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=56;Dels=0.00;FS=0.000;GAnc=C;GRP=0.18;HRun=0;HaplotypeScore=0.8667;MQ=37.85;MQ0=0;Map20=1;OAnc=C;QD=36.92;TS=HPGOMC;TSseq=C,C,C,C,G,G;bSC=711;mSC=0.090;pSC=0.127	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1325,102,0:0,0:0,0:0,0:19,16:0:37.85:0;1/1:21:63.20:814,63,0:0,0:0,0:0,0:7,14:0:37.00:0	-
16_75301838_G/C	16	75301838	C	ENSG00000050820	ENST00000393422	Transcript	NON_SYNONYMOUS_CODING	114	41	14	P/R	cCc/cGc	-	ENSP=ENSP00000377074;PolyPhen=benign(0);SIFT=tolerated(0.21);HGNC=BCAR1	G	C/C,C/C	G	G	G	N/N,N/N	rs148519476	0.97	.	1.57	0.000	0.880	775	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.06;AMR_AF=0.02;AN=4;CAnc=G;DP=62;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=1.57;HRun=0;HaplotypeScore=1.9955;MQ=37.77;MQ0=0;Map20=1;OAnc=G;QD=38.10;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=775;mSC=0.000;pSC=0.880	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1519,117,0:0,0:18,20:0,0:0,0:0:37.77:0;1/1:23:69.23:920,69,0:0,0:10,13:0,0:0,0:0:37.00:0	-
16_75498148_T/C	16	75498148	C	ENSG00000166822	ENST00000569540	Transcript	NON_SYNONYMOUS_CODING	167	1	1	M/V	Atg/Gtg	-	ENSP=ENSP00000455491;PolyPhen=benign(0);HGNC=TMEM170A	T	C/C,C/C	T	T	C,T	N/N,N/N	rs115618771	0.93	.	-7.35	0.000	.	664	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.20;AMR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=T;DP=31;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=T;GRP=-7.35;HRun;HaplotypeScore=0.7340;MQ=35.41;MQ0=0;Map20=1;OAnc=C,T;QD=35.54;TS=HPGOMCOCOC;TSseq=T,T,T,T,C,C,C,-,-,-,C,C;bSC=664;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:21:63.17:779,63,0:0,0:10,11:0,0:0,0:0:35.41:0;1/1:10:30.08:363,30,0:0,0:5,5:0,0:0,0:0:33.42:0	-
16_81209247_C/T	16	81209247	T	ENSG00000166473	ENST00000337114	Transcript	NON_SYNONYMOUS_CODING	2546	2546	849	R/H	cGt/cAt	-	ENSP=ENSP00000337397;PolyPhen=benign(0.003);SIFT=tolerated(0.11);HGNC=PKD1L2	C	T/T,T/T	C	C	C	N/N,N/N	rs1869349	0.98	CpG	-8.12	0.000	0.782	952	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.02;AN=4;CAnc=C;CpG;DP=68;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=-8.12;HRun=0;HaplotypeScore=0.0000;MQ=39.71;MQ0=0;Map20=1;OAnc=C;QD=38.52;TS=HPGOMC;TSseq=C,T,C,C,C,C;bSC=952;mSC=0.000;pSC=0.782	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1689,129,0:0,0:0,0:0,0:19,24:0:39.71:0;1/1:25:75.25:1000,75,0:0,0:0,0:0,0:13,12:0:37.00:0	-
16_81232590_T/C	16	81232590	C	ENSG00000166473	ENST00000337114	Transcript	NON_SYNONYMOUS_CODING	1220	1220	407	N/S	aAt/aGt	-	ENSP=ENSP00000337397;PolyPhen=probably_damaging(0.998);SIFT=deleterious(0);HGNC=PKD1L2	T	C/C,C/C	T	T	T	N/N,N/N	rs9937169	0.98	.	4.14	0.148	0.018	934	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.01;AN=4;BaseQRankSum=-0.577;CAnc=T;DP=73;Dels=0.00;FS=0.000;GAnc=T;GRP=4.14;HRun=0;HaplotypeScore=1.9731;MQ=40.82;MQ0=0;MQRankSum=-0.423;Map20=1;OAnc=T;QD=36.03;ReadPosRankSum=0.808;TS=HPGOMC;TSseq=T,T,T,-,T,T;bSC=934;mSC=0.148;pSC=0.018	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:95.40:1654,95,0:0,0:21,23:0,0:0,1:0:40.82:0;1/1:28:84.26:1095,84,0:0,0:13,15:0,0:0,0:0:37.00:0	-
16_88891240_C/A	16	88891240	A	ENSG00000141012	ENST00000268695	Transcript	NON_SYNONYMOUS_CODING	1266	1177	393	A/S	Gcc/Tcc	-	ENSP=ENSP00000268695;PolyPhen=benign(0.039);SIFT=tolerated(0.07);HGNC=GALNS	C	A/A,A/A	C	C	C	N/N,N/N	rs2303269	0.95	.	1.61	0.083	0.723	830	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.05;AMR_AF=0.09;AN=4;ASN_AF=0.03;CAnc=C;DP=58;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=C;GRP=1.61;HRun=0;HaplotypeScore=0.9997;MQ=38.96;MQ0=0;Map20=1;OAnc=C;QD=37.08;TS=HPGOMC;TSseq=C,C,C,C,-,C;bSC=830;mSC=0.083;pSC=0.723	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1516,117,0:19,18:0,0:0,0:0,0:0:38.96:0;1/1:18:54.15:702,54,0:11,7:0,0:0,0:0,0:0:37.00:0	-
16_88922630_T/C	16	88922630	C	ENSG00000141012	ENST00000568311	Transcript	NON_SYNONYMOUS_CODING	293	200	67	E/G	gAg/gGg	-	ENSP=ENSP00000455006;PolyPhen=unknown(0);SIFT=tolerated(0.17);HGNC=GALNS	T	C/C,C/C	T	T	T	N/N,N/N	rs3784878	0.97	.	-1.6	0.018	0.077	830	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.05;AMR_AF=0.02;AN=4;ASN_AF=0.01;BaseQRankSum=1.452;CAnc=T;DP=58;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=-1.6;HRun=2;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=T;QD=36.44;ReadPosRankSum=-1.171;TS=HPGOMC;TSseq=T,T,T,T,T,-;bSC=830;mSC=0.018;pSC=0.077	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:81.72:1381,82,0:0,0:15,21:0,0:0,1:0:37.81:0;1/1:21:60.19:783,60,0:0,0:12,9:0,0:0,0:0:36.52:0	-
16_89839766_G/C	16	89839766	C	ENSG00000187741	ENST00000389301	Transcript	NON_SYNONYMOUS_CODING	1958	1927	643	P/A	Ccc/Gcc	-	ENSP=ENSP00000373952;PolyPhen=benign(0.002);SIFT=tolerated(0.29);HGNC=FANCA	G	C/C,C/C	G	G	G	N/N,N/N	rs17232910	0.91	.	-2.44	0.006	0.074	596	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.01;AMR_AF=0.03;AN=4;ASN_AF=0.22;CAnc=G;DP=74;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=-2.44;HRun=0;HaplotypeScore=0.9992;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.54;TS=HPGOMC;TSseq=G,G,G,A,G,G;bSC=596;mSC=0.006;pSC=0.074	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1613,123,0:0,0:17,24:0,0:0,0:0:37.00:0;1/1:33:99:1300,99,0:0,0:16,17:0,0:0,0:0:37.00:0	-
17_4463713_A/G	17	4463713	G	ENSG00000167741	ENST00000301395	Transcript	NON_SYNONYMOUS_CODING	164	104	35	L/P	cTg/cCg	-	ENSP=ENSP00000301395;PolyPhen=possibly_damaging(0.79);SIFT=deleterious(0.04);HGNC=GGT6	A	G/G,G/G	A	A	A	N/N,N/N	rs62066362	0.98	.	3.67	0.004	0.010	777	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.01;AMR_AF=0.05;AN=4;CAnc=A;DP=51;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=3.67;HRun;HaplotypeScore=0.0000;MQ=36.47;MQ0=0;Map20=1;OAnc=A;QD=36.95;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=777;mSC=0.004;pSC=0.010	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1437,114,0:0,0:0,0:21,17:0,0:0:36.47:0;1/1:13:39.12:503,39,0:0,0:0,0:6,7:0,0:0:37.00:0	-
17_4717941_G/A	17	4717941	A	ENSG00000129219	ENST00000263088	Transcript	NON_SYNONYMOUS_CODING	1239	1108	370	V/I	Gtt/Att	-	ENSP=ENSP00000263088;PolyPhen=benign(0.001);SIFT=tolerated(1);HGNC=PLD2	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	-3.55	.	0.972	583	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=76;Dels=0.00;FS=0.000;GAnc=G;GRP=-3.55;HRun=0;HaplotypeScore=0.0000;MQ=38.80;MQ0=0;Map20=1;OAnc=G;QD=38.31;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=583;pSC=0.972	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1910,147,0:24,24:0,0:0,0:0,0:0:38.80:0;1/1:27:81.26:1067,81,0:13,14:0,0:0,0:0,0:0:37.00:0	+
17_4720549_G/A	17	4720549	A	ENSG00000129219	ENST00000263088	Transcript	NON_SYNONYMOUS_CODING	1941	1810	604	V/I	Gta/Ata	-	ENSP=ENSP00000263088;PolyPhen=possibly_damaging(0.547);SIFT=tolerated(0.12);HGNC=PLD2	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	4.48	.	0.024	583	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=56;Dels=0.00;FS=0.000;GAnc=G;GRP=4.48;HRun=0;HaplotypeScore=3.8824;MQ=38.18;MQ0=0;Map20=1;OAnc=G;QD=36.96;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=583;pSC=0.024	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1585,123,0:14,27:0,0:0,0:0,0:0:38.18:0;1/1:14:42.13:534,42,0:8,6:0,0:0,0:0,0:0:37.00:0	+
17_4796839_G/C	17	4796839	C	ENSG00000141503	ENST00000347992	Transcript	NON_SYNONYMOUS_CODING	2608	2424	808	E/D	gaG/gaC	-	ENSP=ENSP00000269296;PolyPhen=benign(0.416);SIFT=tolerated(0.33);HGNC=MINK1	G	C/C,C/C	G	-	G	N/N,N/N	rs182818413	1.0	.	1.57	.	0.549	363	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;DP=62;Dels=0.00;FS=0.000;GRP=1.57;HRun=0;HaplotypeScore=2.9992;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=39.01;TS=HPO;TSseq=G,G,G;bSC=363;pSC=0.549	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1476,111,0:0,0:16,21:0,0:0,0:0:37.00:0;1/1:25:75.25:1000,75,0:0,0:10,15:0,0:0,0:0:37.00:0	+
17_4892176_C/G	17	4892176	G	ENSG00000196388	ENST00000355025	Transcript	NON_SYNONYMOUS_CODING	856	414	138	E/D	gaG/gaC	-	ENSP=ENSP00000347129;PolyPhen=benign(0.002);SIFT=tolerated(0.56);HGNC=INCA1	C	G/G,G/G	C	C	C	N/N,N/N	rs74744272	0.92	.	-3.55	0.000	0.867	250	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.02;AMR_AF=0.07;AN=4;ASN_AF=0.06;CAnc=C;DP=72;Dels=0.00;EUR_AF=0.13;FS=0.000;GAnc=C;GRP=-3.55;HRun=0;HaplotypeScore=1.9955;MQ=39.38;MQ0=0;Map20=1;OAnc=C;QD=36.58;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=250;mSC=0.000;pSC=0.867	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1679,132,0:0,1:0,0:21,22:0,0:0:39.38:0;1/1:27:81.25:1049,81,0:0,0:0,0:20,7:0,0:0:37.00:0	-
17_7324250_C/G	17	7324250	G	ENSG00000181323	ENST00000323383	Transcript	NON_SYNONYMOUS_CODING	608	103	35	Q/E	Cag/Gag	-	ENSP=ENSP00000315511;PolyPhen=benign(0.416);SIFT=deleterious(0.02);HGNC=SPEM1	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	-1.68	0.329	0.383	429	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=-1.68;HRun;HaplotypeScore=0.0000;MQ=37.77;MQ0=0;Map20=1;OAnc=C;QD=38.34;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=429;mSC=0.329;pSC=0.383	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1528,117,0:0,0:0,0:18,21:0,0:0:37.77:0;1/1:31:93.30:1219,93,0:0,0:0,0:14,17:0,0:0:37.00:0	+
17_7468011_C/G	17	7468011	G	ENSG00000161956	ENST00000321337	Transcript	NON_SYNONYMOUS_CODING	1105	785	262	A/G	gCa/gGa	-	ENSP=ENSP00000314029;PolyPhen=benign(0.204);SIFT=deleterious(0.01);HGNC=SENP3	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	1.79	1.000	0.947	167	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.479;CAnc=C;DP=68;Dels=0.00;FS=0.000;GAnc=C;GRP=1.79;HRun=2;HaplotypeScore=1.8661;MQ=37.73;MQ0=0;MQRankSum=1.479;Map20=1;OAnc=C;QD=36.19;ReadPosRankSum=-1.395;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=167;mSC=1.000;pSC=0.947	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:82.59:1517,83,0:0,0:0,1:16,24:0,0:0:37.73:0;1/1:27:81.26:1057,81,0:0,0:0,0:21,6:0,0:0:37.00:0	+
17_10608307_G/A	17	10608307	A	ENSG00000170222	ENST00000379774	Transcript	NON_SYNONYMOUS_CODING	135	64	22	V/I	Gtc/Atc	-	ENSP=ENSP00000369099;PolyPhen=benign(0.019);SIFT=tolerated(0.24);HGNC=C17orf48	G	A/A,A/A	G	G	G	N/N,N/N	rs79976834	0.99	CpG	3.36	0.999	0.161	640	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=G;CpG;DP=87;Dels=0.00;FS=0.000;GAnc=G;GRP=3.36;HRun=0;HaplotypeScore=3.3654;MQ=38.77;MQ0=0;Map20=1;OAnc=G;QD=36.30;TS=HPGO;TSseq=G,G,G,A;UR;bSC=640;mSC=0.999;pSC=0.161	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1848,141,0:25,24:0,0:0,0:0,0:0:38.77:0;1/1:37:99:1432,108,0:17,20:0,0:0,0:0,0:0:37.00:0	+
17_10628364_C/T	17	10628364	T	ENSG00000187824	ENST00000341871	Transcript	NON_SYNONYMOUS_CODING	729	251	84	R/H	cGt/cAt	-	ENSP=ENSP00000339830;PolyPhen=benign(0);SIFT=tolerated(1);HGNC=TMEM220	C	T/T,T/T	C	C	C	N/N,N/N	rs79737146	0.99	CpG	3.76	0.075	0.163	652	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=61;Dels=0.00;FS=0.000;GAnc=C;GRP=3.76;HRun=0;HaplotypeScore=2.5774;MQ=38.39;MQ0=0;Map20=1;OAnc=C;QD=37.18;TS=HPGO;TSseq=C,C,C,T;UR;bSC=652;mSC=0.075;pSC=0.163	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1520,117,0:0,0:0,0:0,0:21,19:0:38.39:0;1/1:21:63.20:818,63,0:0,0:0,0:0,0:11,10:0:37.00:0	-
17_11672509_G/A	17	11672509	A	ENSG00000007174	ENST00000262442	Transcript	NON_SYNONYMOUS_CODING	7483	7415	2472	R/Q	cGg/cAg	-	ENSP=ENSP00000262442;PolyPhen=benign(0.02);SIFT=tolerated(0.4);HGNC=DNAH9	G	A/A,A/A	G	G	-	N/N,N/N	rs188772907	1.0	CpG	2.37	0.802	0.485	845	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;CpG;DP=54;Dels=0.00;FS=0.000;GAnc=G;GRP=2.37;HRun=0;HaplotypeScore=1.9995;MQ=39.25;MQ0=0;Map20=1;QD=38.36;TS=HPGMC;TSseq=G,G,G,G,G;UR;bSC=845;mSC=0.802;pSC=0.485	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1529,117,0:15,24:0,0:0,0:0,0:0:39.25:0;1/1:15:45.13:563,45,0:5,10:0,0:0,0:0,0:0:37.00:0	+
17_11713662_C/T	17	11713662	T	ENSG00000007174	ENST00000262442	Transcript	NON_SYNONYMOUS_CODING	8751	8683	2895	L/F	Ctc/Ttc	-	ENSP=ENSP00000262442;PolyPhen=benign(0.239);SIFT=tolerated(0.07);HGNC=DNAH9	C	T/T,T/T	C	C	-	N/N,N/N	.	1	.	4.66	1.000	0.980	869	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.543;CAnc=C;DP=80;Dels=0.00;FS=3.345;GAnc=C;GRP=4.66;HRun;HaplotypeScore=1.9849;MQ=38.58;MQ0=0;MQRankSum=-1.732;Map20=1;QD=35.72;ReadPosRankSum=-0.787;TS=HPGC;TSseq=C,C,C,C;UR;bSC=869;mSC=1.000;pSC=0.980	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2034,136,0:0,0:1,0:0,0:25,30:0:38.58:0;1/1:24:72.23:948,72,0:0,0:0,0:0,0:10,14:0:37.00:0	+
17_13980058_A/T	17	13980058	T	ENSG00000006695	ENST00000261643	Transcript	NON_SYNONYMOUS_CODING	261	184	62	T/S	Aca/Tca	-	ENSP=ENSP00000261643;PolyPhen=benign(0.024);SIFT=deleterious(0.04);HGNC=COX10	A	T/T,T/T	A	A	A	N/N,N/N	rs2230351	0.93	.	5.33	1.000	0.940	916	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.01;AMR_AF=0.09;AN=4;ASN_AF=0.12;BaseQRankSum=1.648;CAnc=A;DP=65;Dels=0.00;EUR_AF=0.07;FS=4.367;GAnc=A;GRP=5.33;HRun=0;HaplotypeScore=2.9968;MQ=37.68;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=A;QD=34.79;ReadPosRankSum=-1.564;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=916;mSC=1.000;pSC=0.940	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:91.85:1564,92,0:1,0:0,0:0,0:17,26:0:37.68:0;1/1:21:63.21:840,63,0:0,0:0,0:0,0:12,9:0:37.00:0	+
17_16893431_G/A	17	16893431	A	ENSG00000230969	ENST00000419151	Transcript	NON_SYNONYMOUS_CODING	340	214	72	G/S	Ggt/Agt	-	ENSP=ENSP00000387690;PolyPhen=benign(0.085)	G	A/A,A/A	G	G	G	N/N,N/N	rs115691557	0.98	RM	-0.0861	0.002	0.486	819	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AMR_AF=0.02;AN=4;CAnc=G;DP=83;Dels=0.01;FS=0.000;GAnc=G;GRP=-0.0861;HRun;HaplotypeScore=0.9665;MQ=38.21;MQ0=0;Map20=1;OAnc=G;QD=36.05;RM;TS=HPGOM;TSseq=G,G,G,N,G;bSC=819;mSC=0.002;pSC=0.486	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1799,138,0:22,26:0,0:0,0:0,0:0:38.21:0;1/1:34:99:1354,102,0:15,19:0,0:0,0:0,0:0:37.00:0	+
17_17068471_A/G	17	17068471	G	ENSG00000133030	ENST00000313485	Transcript	NON_SYNONYMOUS_CODING	498	500	167	N/S	aAt/aGt	-	ENSP=ENSP00000317786;PolyPhen=benign(0.001);SIFT=tolerated(0.44);HGNC=MPRIP	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	3.39	0.476	0.981	405	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.132;CAnc=A;DP=69;Dels=0.00;FS=0.000;GAnc=A;GRP=3.39;HRun=0;HaplotypeScore=5.9281;MQ=38.24;MQ0=0;MQRankSum=0.553;Map20=1;OAnc=A;QD=34.37;ReadPosRankSum=-0.764;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=405;mSC=0.476;pSC=0.981	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:61.43:1683,61,0:1,1:1,0:23,22:0,0:0:38.24:0;1/1:21:63.20:807,63,0:0,0:0,0:9,12:0,0:0:37.00:0	+
17_19458972_C/T	17	19458972	T	ENSG00000142494	ENST00000542886	Transcript	NON_SYNONYMOUS_CODING	696	610	204	R/W	Cgg/Tgg	-	ENSP=ENSP00000440435;PolyPhen=benign(0);SIFT=tolerated(0.07);HGNC=SLC47A1	C	T/T,T/T	C	C	C	N/N,N/N	rs16960203	0.97	CpG	-7.6	0.000	0.756	759	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.04;AN=4;ASN_AF=0.07;CAnc=C;CpG;DP=86;Dels=0.00;FS=0.000;GAnc=C;GRP=-7.6;HRun;HaplotypeScore=0.9997;MQ=38.29;MQ0=0;Map20=1;OAnc=C;QD=37.32;TS=HPGOMC;TSseq=C,C,C,C,-,T;UR;bSC=759;mSC=0.000;pSC=0.756	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1750,132,0:0,0:0,0:0,0:15,30:0:38.29:0;1/1:40:99:1576,120,0:0,0:0,0:0,0:20,20:0:37.00:0	+
17_19861599_G/C	17	19861599	C	ENSG00000108599	ENST00000225737	Transcript	NON_SYNONYMOUS_CODING	763	605	202	S/C	tCt/tGt	-	ENSP=ENSP00000225737;PolyPhen=benign(0.268);SIFT=deleterious(0.02);HGNC=AKAP10	G	C/C,C/C	G	G	G	N/N,N/N	rs79803528	0.98	.	4.94	1.000	0.443	503	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.09;BaseQRankSum=0.255;CAnc=G;DP=109;Dels=0.00;FS=7.648;GAnc=G;GRP=4.94;HRun=0;HaplotypeScore=1.9995;MQ=37.95;MQ0=0;MQRankSum=0.098;Map20=1;OAnc=G;QD=36.25;ReadPosRankSum=1.627;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=503;mSC=1.000;pSC=0.443	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2317,110,0:0,0:37,24:0,2:0,0:0:37.95:0;1/1:46:99:1775,135,0:0,0:23,23:0,0:0,0:0:37.00:0	-
17_26209974_C/T	17	26209974	T	ENSG00000232859	ENST00000379103	Transcript	NON_SYNONYMOUS_CODING	262	131	44	G/E	gGg/gAg	-	ENSP=ENSP00000368397;PolyPhen=benign(0);HGNC=C17orf108	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	-5.97	0.000	0.051	617	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=80;Dels=0.00;FS=0.000;GAnc=C;GRP=-5.97;HRun=0;HaplotypeScore=2.9992;MQ=36.59;MQ0=0;Map20=1;OAnc=C;QD=38.28;TS=HPGOMC;TSseq=C,C,C,C,T,C;bSC=617;mSC=0.000;pSC=0.051	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1909,147,0:0,0:0,0:0,0:26,22:0:36.59:0;1/1:31:93.30:1233,93,0:0,0:0,0:0,0:15,16:0:37.00:0	-
17_27945168_G/C	17	27945168	C	ENSG00000167549	ENST00000445145	Transcript	NON_SYNONYMOUS_CODING	653	651	217	H/Q	caC/caG	-	ENSP=ENSP00000393624;PolyPhen=probably_damaging(1);SIFT=deleterious(0);HGNC=CORO6	G	C/C,C/C	G	G	G	N/N,N/N	.	1	CpG	4.92	1.000	0.858	94	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=45;Dels=0.00;FS=0.000;GAnc=G;GRP=4.92;HRun;HaplotypeScore=0.0000;MQ=36.84;MQ0=0;Map20=1;OAnc=G;QD=36.82;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=94;mSC=1.000;pSC=0.858	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:87.28:1137,87,0:0,0:15,14:0,0:1,0:0:36.84:0;1/1:15:45.15:600,45,0:0,0:8,7:0,0:0,0:0:37.00:0	-
17_37034365_C/T	17	37034365	T	ENSG00000002834	ENST00000433206	Transcript	STOP_GAINED	255	13	5	R/*	Cga/Tga	-	ENSP=ENSP00000401048;HGNC=LASP1	C	T/T,T/T	C	C	C	N/N,N/N	rs141320621	1.0	CpG	-0.224	0.996	0.985	706	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=82;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.224;HRun=0;HaplotypeScore=1.9995;MQ=38.80;MQ0=0;Map20=1;OAnc=C;QD=37.78;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=706;mSC=0.996;pSC=0.985	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1884,144,0:0,0:0,0:0,0:24,25:0:38.80:0;1/1:33:99:1304,99,0:0,0:0,0:0,0:23,10:0:37.00:0	+
17_37778503_A/G	17	37778503	G	ENSG00000214546	ENST00000398554	Transcript	NON_SYNONYMOUS_CODING	353	268	90	K/E	Aag/Gag	-	ENSP=ENSP00000381562;PolyPhen=unknown(0)	A	G/G,G/G	A	A	A	N/N,N/N	rs181765550	1.0	.	-0.451	0.001	0.347	133	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=A;DP=70;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.451;HRun=0;HaplotypeScore=0.0000;MQ=37.66;MQ0=0;Map20=1;OAnc=A;QD=38.29;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=133;mSC=0.001;pSC=0.347	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1756,135,0:0,0:0,0:24,21:0,0:0:37.66:0;1/1:25:75.24:990,75,0:0,0:0,0:15,10:0,0:0:37.00:0	+
17_39538600_T/C	17	39538600	C	ENSG00000131737	ENST00000251648	Transcript	NON_SYNONYMOUS_CODING	56	25	9	T/A	Aca/Gca	-	ENSP=ENSP00000251648;PolyPhen=possibly_damaging(0.626);SIFT=deleterious(0);HGNC=KRT34	T	C/C,C/C	T	-	T	N/N,N/N	.	1.0	.	4.91	.	.	322	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=0.700;CAnc=T;DP=76;Dels=0.00;FS=4.416;GRP=4.91;HRun=0;HaplotypeScore=1.9944;MQ=38.26;MQ0=0;MQRankSum=-0.627;Map20=1;OAnc=T;QD=36.32;ReadPosRankSum=0.627;TS=HPOMC;TSseq=T,T,T,T,T;bSC=322	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:98.44:1740,98,0:0,0:16,30:0,0:1,0:0:38.26:0;1/1:29:87.28:1143,87,0:0,0:15,14:0,0:0,0:0:37.00:0	-
17_40939855_G/T	17	40939855	T	ENSG00000126562	ENST00000246914	Transcript	NON_SYNONYMOUS_CODING	1869	1801	601	A/S	Gcc/Tcc	-	ENSP=ENSP00000246914;PolyPhen=benign(0.039);SIFT=tolerated(0.33);HGNC=WNK4	G	T/T,T/T	G	G	G	N/N,N/N	rs55781437	0.93	.	4.07	1.000	0.848	141	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.23;AMR_AF=0.02;AN=4;ASN_AF=0.04;BaseQRankSum=1.103;CAnc=G;DP=53;Dels=0.00;FS=0.000;GAnc=G;GRP=4.07;HRun;HaplotypeScore=3.6524;MQ=36.69;MQ0=0;MQRankSum=1.628;Map20=1;OAnc=G;QD=36.07;ReadPosRankSum=0.998;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=141;mSC=1.000;pSC=0.848	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:69.69:1223,70,0:0,0:0,0:0,1:11,21:0:36.69:0;1/1:20:57.19:760,57,0:0,0:0,0:0,0:9,11:0:37.00:0	+
17_42266745_G/C	17	42266745	C	ENSG00000168591	ENST00000319511	Transcript	NON_SYNONYMOUS_CODING	981	331	111	E/Q	Gag/Cag	-	ENSP=ENSP00000313214;PolyPhen=possibly_damaging(0.883);SIFT=tolerated(0.39);HGNC=TMUB2	G	C/C,C/C	G	G	G	N/N,N/N	.	1	.	5.21	.	0.730	247	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=53;Dels=0.00;FS=0.000;GAnc=G;GRP=5.21;HRun=0;HaplotypeScore=0.9947;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.70;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=247;pSC=0.730	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:84.24:1088,84,0:0,0:15,12:0,0:0,0:0:37.00:0;1/1:25:72.23:953,72,0:0,0:13,12:0,0:0,0:0:37.00:0	+
17_46923411_A/G	17	46923411	G	ENSG00000136436	ENST00000509507	Transcript	NON_SYNONYMOUS_CODING	259	196	66	T/A	Act/Gct	-	ENSP=ENSP00000424352;PolyPhen=benign(0);SIFT=tolerated(0.52);HGNC=CALCOCO2	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	1.1	0.000	0.348	428	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=90;Dels=0.00;FS=0.000;GAnc=A;GRP=1.1;HRun;HaplotypeScore=0.0000;MQ=38.67;MQ0=0;Map20=1;OAnc=A;QD=38.71;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=428;mSC=0.000;pSC=0.348	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:2084,160,0:0,0:0,0:24,29:0,0:0:38.67:0;1/1:37:99:1444,111,0:0,0:0,0:18,19:0,0:0:36.73:0	+
17_48618243_C/G	17	48618243	G	ENSG00000049283	ENST00000268933	Transcript	NON_SYNONYMOUS_CODING	1648	1069	357	R/G	Cga/Gga	-	ENSP=ENSP00000268933;PolyPhen=benign(0.002);SIFT=tolerated(0.4);HGNC=EPN3	C	G/G,G/G	C	C	C	N/N,N/N	rs145595403	0.99	CpG	3.08	.	0.584	653	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AN=4;CAnc=C;CpG;DP=53;Dels=0.00;FS=0.000;GAnc=C;GRP=3.08;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=38.81;TS=HPGOMC;TSseq=C,C,C,C,N,C;bSC=653;pSC=0.584	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1469,111,0:0,0:0,0:20,17:0,0:0:37.81:0;1/1:16:48.15:622,48,0:0,0:0,0:6,10:0,0:0:37.00:0	+
17_48618360_C/T	17	48618360	T	ENSG00000049283	ENST00000268933	Transcript	NON_SYNONYMOUS_CODING	1765	1186	396	H/Y	Cac/Tac	-	ENSP=ENSP00000268933;PolyPhen=benign(0.248);SIFT=tolerated(0.21);HGNC=EPN3	C	T/T,T/T	C	C	C	N/N,N/N	rs78111408	0.95	.	3.15	.	0.556	653	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.06;AMR_AF=0.10;AN=4;ASN_AF=0.04;CAnc=C;DP=53;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=3.15;HRun=0;HaplotypeScore=0.9665;MQ=37.85;MQ0=0;Map20=1;OAnc=C;QD=36.27;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=653;pSC=0.556	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1302,99,0:0,0:0,0:0,0:23,11:0:37.85:0;1/1:18:54.17:710,54,0:0,0:0,0:0,0:13,5:0:37.00:0	+
17_56388303_T/A	17	56388303	A	ENSG00000005379	ENST00000268893	Transcript	NON_SYNONYMOUS_CODING	4044	3173	1058	H/L	cAc/cTc	-	ENSP=ENSP00000268893;PolyPhen=benign(0.054);SIFT=tolerated(0.66);HGNC=BZRAP1	T	A/A,A/A	T	T	T	N/N,N/N	rs3744099	0.93	.	-11.5	0.000	0.884	325	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.07;AMR_AF=0.05;AN=4;ASN_AF=0.12;CAnc=T;DP=59;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=T;GRP=-11.5;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.71;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=325;mSC=0.000;pSC=0.884	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.31:1272,96,0:16,16:0,0:0,0:0,0:0:37.00:0;1/1:27:81.26:1063,81,0:14,13:0,0:0,0:0,0:0:37.00:0	-
17_56692633_G/A	17	56692633	A	ENSG00000121101	ENST00000240361	Transcript	NON_SYNONYMOUS_CODING	977	859	287	R/W	Cgg/Tgg	-	ENSP=ENSP00000240361;PolyPhen=probably_damaging(0.997);SIFT=deleterious(0);HGNC=TEX14	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	0.971	0.996	0.487	27	1	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=76;Dels=0.00;FS=0.000;GAnc=G;GRP=0.971;HRun=0;HaplotypeScore=3.5757;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=37.94;TS=HPGOC;TSseq=G,G,G,G,G;bSC=27;mSC=0.996;pSC=0.487	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:2006,156,0:27,25:0,0:0,0:0,0:0:37.00:0;1/1:24:69.23:920,69,0:14,9:1,0:0,0:0,0:0:37.00:0	-
17_59489896_C/T	17	59489896	T	ENSG00000187013	ENST00000335108	Transcript	NON_SYNONYMOUS_CODING	785	560	187	T/I	aCa/aTa	-	ENSP=ENSP00000335229;PolyPhen=possibly_damaging(0.732);HGNC=C17orf82	C	T/T,T/T	C	C	C	N/N,N/N	rs61764069	0.92	.	-3.91	0.001	0.614	658	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.27;AMR_AF=0.05;AN=4;ASN_AF=0.04;CAnc=C;DP=39;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.91;HRun=0;HaplotypeScore=0.0000;MQ=36.47;MQ0=0;Map20=1;OAnc=C;QD=34.81;TS=HPGOMC;TSseq=C,C,C,-,C,C;UR;bSC=658;mSC=0.001;pSC=0.614	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:19:54.17:694,54,0:0,0:0,0:0,0:8,10:0:36.47:0;1/1:20:57.15:722,57,0:0,0:0,0:0,0:7,13:0:37.00:0	+
17_62271116_G/A	17	62271116	A	ENSG00000136478	ENST00000258991	Transcript	NON_SYNONYMOUS_CODING	2130	1979	660	P/L	cCg/cTg	-	ENSP=ENSP00000258991;PolyPhen=benign(0.001);SIFT=tolerated(0.33);HGNC=TEX2	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	-1.36	0.232	0.825	515	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.416;CAnc=G;CpG;DP=83;Dels=0.00;FS=3.188;GAnc=G;GRP=-1.36;HRun=0;HaplotypeScore=1.9995;MQ=39.74;MQ0=0;MQRankSum=-1.247;Map20=1;OAnc=G;QD=34.12;ReadPosRankSum=-0.624;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=515;mSC=0.232;pSC=0.825	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1841,107,0:26,26:0,0:0,1:0,0:0:39.74:0;1/1:30:90.29:1173,90,0:16,14:0,0:0,0:0,0:0:37.00:0	-
17_62290965_G/A	17	62290965	A	ENSG00000136478	ENST00000258991	Transcript	NON_SYNONYMOUS_CODING	764	613	205	P/S	Cca/Tca	-	ENSP=ENSP00000258991;PolyPhen=benign(0.002);SIFT=tolerated(0.54);HGNC=TEX2	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	4.05	0.240	0.935	496	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=77;Dels=0.00;FS=0.000;GAnc=G;GRP=4.05;HRun=0;HaplotypeScore=1.9955;MQ=38.80;MQ0=0;Map20=1;OAnc=G;QD=37.54;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=496;mSC=0.240;pSC=0.935	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1873,141,0:21,28:0,0:0,0:0,0:0:38.80:0;1/1:28:84.28:1120,84,0:10,18:0,0:0,0:0,0:0:37.00:0	-
17_62291265_C/T	17	62291265	T	ENSG00000136478	ENST00000258991	Transcript	NON_SYNONYMOUS_CODING	464	313	105	A/T	Gcc/Acc	-	ENSP=ENSP00000258991;PolyPhen=possibly_damaging(0.5);SIFT=deleterious(0.03);HGNC=TEX2	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	4.17	0.898	0.939	495	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.424;CAnc=C;DP=78;Dels=0.00;FS=0.000;GAnc=C;GRP=4.17;HRun=0;HaplotypeScore=0.9997;MQ=37.61;MQ0=0;MQRankSum=1.270;Map20=1;OAnc=C;QD=33.83;ReadPosRankSum=1.578;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=495;mSC=0.898;pSC=0.939	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:95.42:1691,95,0:0,0:0,1:0,0:25,22:0:37.61:0;1/1:29:87.28:1134,87,0:0,0:0,0:0,0:14,15:0:37.00:0	-
17_62291316_G/A	17	62291316	A	ENSG00000136478	ENST00000258991	Transcript	NON_SYNONYMOUS_CODING	413	262	88	P/S	Cct/Tct	-	ENSP=ENSP00000258991;PolyPhen=benign(0.211);SIFT=tolerated(0.09);HGNC=TEX2	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	4.29	0.830	0.408	495	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.753;CAnc=G;DP=74;Dels=0.00;FS=0.000;GAnc=G;GRP=4.29;HRun=0;HaplotypeScore=0.9997;MQ=37.64;MQ0=0;MQRankSum=0.301;Map20=1;OAnc=G;QD=35.79;ReadPosRankSum=1.356;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=495;mSC=0.830;pSC=0.408	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:98.43:1715,98,0:26,18:0,0:1,0:0,0:0:37.64:0;1/1:27:81.25:1041,81,0:15,12:0,0:0,0:0,0:0:37.00:0	-
17_64880788_G/A	17	64880788	A	ENSG00000075429	ENST00000169565	Transcript	NON_SYNONYMOUS_CODING	580	580	194	V/I	Gtc/Atc	-	ENSP=ENSP00000169565;PolyPhen=probably_damaging(0.951);SIFT=tolerated(0.36);HGNC=CACNG5	G	A/A,A/A	G	G	G	N/N,N/N	rs2286677	0.97	CpG	-5.14	0.000	0.022	923	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AN=4;ASN_AF=0.10;BaseQRankSum=1.785;CAnc=G;CpG;DP=70;Dels=0.00;FS=3.096;GAnc=G;GRP=-5.14;HRun=0;HaplotypeScore=0.9995;MQ=39.77;MQ0=0;MQRankSum=-2.149;Map20=1;OAnc=G;QD=33.31;ReadPosRankSum=-0.151;TS=HPGOMC;TSseq=G,A,G,A,G,N;bSC=923;mSC=0.000;pSC=0.022	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:48.43:1432,48,0:20,20:0,0:2,0:0,0:0:39.77:0;1/1:28:84.27:1096,84,0:12,16:0,0:0,0:0,0:0:37.00:0	+
17_66928460_T/C	17	66928460	C	ENSG00000141338	ENST00000269080	Transcript	NON_SYNONYMOUS_CODING	945	766	256	T/A	Aca/Gca	-	ENSP=ENSP00000269080;PolyPhen=benign(0.045);SIFT=tolerated(0.16);HGNC=ABCA8	T	C/C,C/C	T	T	T	N/N,N/N	rs16973446	0.94	.	2.63	0.383	0.457	779	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.26;AMR_AF=0.03;AN=4;CAnc=T;DP=70;Dels=0.00;FS=0.000;GAnc=T;GRP=2.63;HRun;HaplotypeScore=0.0000;MQ=38.28;MQ0=0;Map20=1;OAnc=T;QD=37.79;TS=HPGOM;TSseq=T,T,T,T,T;UR;bSC=779;mSC=0.383;pSC=0.457	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2074,160,0:0,0:27,25:0,0:0,0:0:38.28:0;1/1:16:48.16:628,48,0:0,0:8,8:0,0:0,0:0:37.00:0	-
17_71384080_G/C	17	71384080	C	ENSG00000069188	ENST00000316893	Transcript	NON_SYNONYMOUS_CODING	4289	4289	1430	S/C	tCc/tGc	-	ENSP=ENSP00000324967;PolyPhen=benign(0.242);SIFT=deleterious(0.02);HGNC=SDK2	G	C/C,C/C	G	G	G	N/N,N/N	rs2270724	0.97	.	4.61	0.994	0.853	889	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.03;AMR_AF=0.01;AN=4;ASN_AF=0.07;CAnc=G;DP=48;Dels=0.00;FS=0.000;GAnc=G;GRP=4.61;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.01;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=889;mSC=0.994;pSC=0.853	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:28:84.27:1097,84,0:0,0:15,12:0,0:0,0:0:37.00:0;1/1:20:60.20:800,60,0:0,0:9,11:0,0:0,0:0:37.00:0	-
17_72278080_G/A	17	72278080	A	ENSG00000171595	ENST00000311014	Transcript	NON_SYNONYMOUS_CODING	234	124	42	V/M	Gtg/Atg	-	ENSP=ENSP00000308312;PolyPhen=benign(0.05);SIFT=tolerated(0.09);HGNC=DNAI2	G	A/A,A/A	G	G	G	N/N,N/N	rs151176313	0.99	CpG	2.1	0.994	0.766	856	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.01;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=72;Dels=0.00;FS=0.000;GAnc=G;GRP=2.1;HRun=0;HaplotypeScore=0.0000;MQ=38.05;MQ0=0;Map20=1;OAnc=G;QD=37.42;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=856;mSC=0.994;pSC=0.766	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1792,138,0:24,23:0,0:0,0:0,0:0:38.05:0;1/1:25:75.24:982,75,0:18,7:0,0:0,0:0,0:0:37.00:0	+
17_72733253_C/G	17	72733253	G	ENSG00000172794	ENST00000392614	Transcript	NON_SYNONYMOUS_CODING	198	105	35	S/R	agC/agG	-	ENSP=ENSP00000376390;PolyPhen=benign(0.001);SIFT=deleterious(0.05);HGNC=RAB37	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	-0.347	0.000	0.013	878	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=38;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.347;HRun;HaplotypeScore=1.9786;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.59;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=878;mSC=0.000;pSC=0.013	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:25:72.23:948,72,0:0,0:0,0:17,8:0,0:0:37.00:0;1/1:13:39.13:520,39,0:0,0:0,0:5,8:0,0:0:37.00:0	+
17_72859264_C/A	17	72859264	A	ENSG00000161513	ENST00000293195	Transcript	NON_SYNONYMOUS_CODING	1384	1297	433	A/S	Gct/Tct	-	ENSP=ENSP00000293195;PolyPhen=benign(0.008);SIFT=tolerated(0.64);HGNC=FDXR	C	A/A,A/A	C	C	C	N/N,N/N	rs113594178	1.0	.	3.9	0.970	0.824	679	0.5	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;DP=65;Dels=0.02;FS=0.000;GAnc=C;GRP=3.9;HRun=0;HaplotypeScore=0.0000;MQ=38.52;MQ0=0;Map20=0.5;OAnc=C;QD=36.30;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=679;mSC=0.970;pSC=0.824	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1449,111,0:18,20:0,0:0,0:1,0:0:38.52:0;1/1:25:75.22:962,75,0:11,14:0,0:0,0:0,0:0:37.00:0	-
17_73554100_A/C	17	73554100	C	ENSG00000073350	ENST00000545227	Transcript	NON_SYNONYMOUS_CODING	206	5	2	H/P	cAt/cCt	-	ENSP=ENSP00000439521;PolyPhen=unknown(0);HGNC=LLGL2	A	C/C,C/C	A	A	A	N/N,N/N	rs181782857	1.0	.	-0.518	0.000	0.043	580	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=A;DP=36;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.518;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=A;QD=38.43;TS=HPGOMC;TSseq=A,A,A,N,A,-;bSC=580;mSC=0.000;pSC=0.043	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:21:63.21:840,63,0:0,0:7,14:0,0:0,0:0:37.00:0;1/1:15:45.13:573,45,0:0,0:9,6:0,0:0,0:0:37.00:0	+
17_73826445_T/C	17	73826445	C	ENSG00000092929	ENST00000207549	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	3208	2828	943	N/S	aAt/aGt	-	ENSP=ENSP00000207549;PolyPhen=possibly_damaging(0.818);SIFT=deleterious(0);HGNC=UNC13D	T	C/C,C/C	T	T	T	N/N,N/N	rs147748627	1.0	.	4.91	0.958	0.687	414	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=T;DP=59;Dels=0.00;FS=0.000;GAnc=T;GRP=4.91;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.53;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=414;mSC=0.958;pSC=0.687	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1536,117,0:0,0:21,18:0,0:0,0:0:37.00:0;1/1:20:60.19:780,60,0:0,0:10,10:0,0:0,0:0:37.00:0	-
17_73831104_G/A	17	73831104	A	ENSG00000092929	ENST00000207549	Transcript	NON_SYNONYMOUS_CODING	2269	1889	630	A/V	gCg/gTg	-	ENSP=ENSP00000207549;PolyPhen=possibly_damaging(0.785);SIFT=deleterious(0.03);HGNC=UNC13D	G	A/A,A/A	G	G	G	N/N,N/N	.	1	CpG	4.43	0.217	0.917	411	0.5	AC=4;AF=1.00;AN=4;CAnc=G;CpG;DP=51;Dels=0.00;FS=0.000;GAnc=G;GRP=4.43;HRun=0;HaplotypeScore=0.0000;MQ=37.96;MQ0=0;Map20=0.5;OAnc=G;QD=38.09;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=411;mSC=0.217;pSC=0.917	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.30:1214,93,0:12,17:0,0:0,0:0,0:0:37.96:0;1/1:20:60.20:793,60,0:12,8:0,0:0,0:0,0:0:37.00:0	-
17_74287320_C/T	17	74287320	T	ENSG00000129646	ENST00000262765	Transcript	NON_SYNONYMOUS_CODING	3170	2990	997	R/Q	cGa/cAa	-	ENSP=ENSP00000262765;PolyPhen=benign(0.06);HGNC=QRICH2	C	T/T,T/T	C	C	C	N/N,N/N	rs75138404	0.96	CpG	-5.77	0.000	0.023	684	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.17;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=95;Dels=0.00;FS=0.000;GAnc=C;GRP=-5.77;HRun;HaplotypeScore=0.9989;MQ=37.33;MQ0=0;Map20=1;OAnc=C;QD=36.40;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=684;mSC=0.000;pSC=0.023	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2253,175,0:0,0:0,0:0,0:29,32:0:37.33:0;1/1:34:68.89:1253,69,0:0,0:0,1:0,0:13,20:0:37.00:0	-
17_76134237_G/A	17	76134237	A	ENSG00000167895	ENST00000318430	Transcript	NON_SYNONYMOUS_CODING	1883	1501	501	V/I	Gtc/Atc	-	ENSP=ENSP00000325561;PolyPhen=benign(0.023);SIFT=tolerated(0.55);HGNC=TMC8	G	A/A,A/A	G	G	G	N/N,N/N	rs11651675	0.98	CpG	-6.58	0.000	0.714	940	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=60;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=-6.58;HRun=0;HaplotypeScore=0.0000;MQ=37.66;MQ0=0;Map20=1;OAnc=G;QD=36.41;TS=HPGOMC;TSseq=G,G,G,A,G,A;bSC=940;mSC=0.000;pSC=0.714	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1416,108,0:20,17:0,0:0,0:0,0:0:37.66:0;1/1:22:66.21:848,66,0:14,8:0,0:0,0:0,0:0:37.00:0	+
17_76200965_C/T	17	76200965	T	ENSG00000183077	ENST00000327898	Transcript	NON_SYNONYMOUS_CODING	460	451	151	R/W	Cgg/Tgg	-	ENSP=ENSP00000328938;PolyPhen=possibly_damaging(0.854);SIFT=deleterious(0.01);HGNC=AFMID	C	T/T,T/T	C	C	C	N/N,N/N	rs72897843	0.95	CpG	3.89	0.152	0.292	952	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.01;AMR_AF=0.07;AN=4;CAnc=C;CpG;DP=87;Dels=0.00;EUR_AF=0.10;FS=0.000;GAnc=C;GRP=3.89;HRun=0;HaplotypeScore=1.5317;MQ=37.53;MQ0=0;Map20=1;OAnc=C;QD=34.95;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=952;mSC=0.152;pSC=0.292	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:1990,150,0:0,0:0,0:0,0:27,29:0:37.53:0;1/1:31:93.30:1229,93,0:0,0:0,0:0,0:14,17:0:37.00:0	+
17_78078753_G/A	17	78078753	A	ENSG00000171298	ENST00000302262	Transcript	NON_SYNONYMOUS_CODING	587	368	123	G/E	gGg/gAg	-	ENSP=ENSP00000305692;PolyPhen=possibly_damaging(0.703);SIFT=deleterious(0.03);HGNC=GAA	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	4.85	0.994	0.517	809	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.124;CAnc=G;DP=46;Dels=0.00;FS=0.000;GAnc=G;GRP=4.85;HRun=0;HaplotypeScore=1.9994;MQ=39.37;MQ0=0;MQRankSum=0.371;Map20=1;OAnc=G;QD=33.91;ReadPosRankSum=1.609;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=809;mSC=0.994;pSC=0.517	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:44.26:1016,44,0:14,13:0,0:1,0:0,1:0:39.37:0;1/1:17:51.16:654,51,0:7,10:0,0:0,0:0,0:0:36.40:0	+
17_78083760_G/C	17	78083760	C	ENSG00000171298	ENST00000302262	Transcript	NON_SYNONYMOUS_CODING	1562	1343	448	S/T	aGc/aCc	-	ENSP=ENSP00000305692;PolyPhen=possibly_damaging(0.753);SIFT=tolerated(0.6);HGNC=GAA	G	C/C,C/C	G	G	G	N/N,N/N	.	1.0	.	4.18	0.944	0.090	809	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=G;DP=63;Dels=0.00;FS=0.000;GAnc=G;GRP=4.18;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=1;OAnc=G;QD=37.12;TS=HPGOMC;TSseq=G,G,G,G,T,G;bSC=809;mSC=0.944;pSC=0.090	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1406,108,0:0,0:18,19:0,0:0,0:0:37.81:0;1/1:26:38.25:950,38,0:0,0:14,11:0,1:0,0:0:36.61:0	+
17_79171959_G/A	17	79171959	A	ENSG00000141577	ENST00000269392	Transcript	NON_SYNONYMOUS_CODING	1674	1426	476	R/C	Cgc/Tgc	-	ENSP=ENSP00000269392;PolyPhen=benign(0.002);SIFT=tolerated(0.1);HGNC=AZI1	G	A/A,A/A	G	G	-	N/N,N/N	.	1	CpG	-2.92	0.000	0.033	862	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.509;CAnc=G;CpG;DP=47;Dels=0.00;FS=3.310;GAnc=G;GRP=-2.92;HRun=0;HaplotypeScore=1.7273;MQ=37.32;MQ0=0;MQRankSum=-1.733;Map20=1;QD=34.49;ReadPosRankSum=-1.398;TS=HPG;TSseq=G,G,G;bSC=862;mSC=0.000;pSC=0.033	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:62.61:1102,63,0:14,16:0,0:1,0:0,0:0:37.32:0;1/1:16:45.14:587,45,0:8,8:0,0:0,0:0,0:0:37.00:0	-
17_79428362_G/T	17	79428362	T	ENSG00000171282	ENST00000307745	Transcript	NON_SYNONYMOUS_CODING	6673	6673	2225	A/S	Gcg/Tcg	-	ENSP=ENSP00000303486;PolyPhen=possibly_damaging(0.536);SIFT=deleterious(0.01);HGNC=BAHCC1	G	T/T,T/T	G	G	G	N/N,N/N	.	1	.	4.25	0.090	0.041	845	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=50;Dels=0.00;FS=0.000;GAnc=G;GRP=4.25;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.71;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=845;mSC=0.090;pSC=0.041	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:96.31:1272,96,0:0,0:0,0:0,0:19,13:0:37.00:0;1/1:18:54.17:707,54,0:0,0:0,0:0,0:13,5:0:37.00:0	+
17_81009623_T/C	17	81009623	C	ENSG00000175711	ENST00000320865	Transcript	NON_SYNONYMOUS_CODING	64	50	17	Q/R	cAg/cGg	-	ENSP=ENSP00000319979;PolyPhen=benign(0);SIFT=tolerated(0.52);HGNC=B3GNTL1	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-3.17	.	0.072	940	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=35;Dels=0.00;FS=0.000;GAnc=T;GRP=-3.17;HRun=2;HaplotypeScore=0.9958;MQ=36.58;MQ0=0;Map20=1;OAnc=T;QD=36.53;TS=HPGOMC;TSseq=T,T,T,T,T,-;bSC=940;pSC=0.072	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:24:69.22:910,69,0:0,0:14,10:0,0:0,0:0:36.58:0;1/1:11:33.11:440,33,0:0,0:6,5:0,0:0,0:0:37.00:0	-
18_2892475_C/T	18	2892475	T	ENSG00000132205	ENST00000254528	Transcript	NON_SYNONYMOUS_CODING	2509	2350	784	P/S	Cca/Tca	-	ENSP=ENSP00000254528;PolyPhen=benign(0.212);SIFT=tolerated(0.24);HGNC=EMILIN2	C	T/T,T/T	C	C	C	N/N,N/N	.	1.0	.	4.45	0.919	0.625	912	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=-0.426;CAnc=C;DP=97;Dels=0.00;FS=0.000;GAnc=C;GRP=4.45;HRun=0;HaplotypeScore=1.9995;MQ=38.84;MQ0=0;MQRankSum=-0.767;Map20=1;OAnc=C;QD=35.41;ReadPosRankSum=0.710;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=912;mSC=0.919;pSC=0.625	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:64:99:2299,144,0:0,0:1,0:0,0:35,28:0:38.84:0;1/1:33:99:1312,99,0:0,0:0,0:0,0:18,15:0:37.00:0	+
18_6243343_T/C	18	6243343	C	ENSG00000154655	ENST00000284898	Transcript	NON_SYNONYMOUS_CODING	611	410	137	H/R	cAt/cGt	-	ENSP=ENSP00000284898;PolyPhen=probably_damaging(0.964);SIFT=tolerated(0.09);HGNC=L3MBTL4	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	2	0.280	0.973	931	1	AC=4;AF=1.00;AN=4;BaseQRankSum=1.432;CAnc=T;DP=85;Dels=0.00;FS=0.000;GAnc=T;GRP=2;HRun=0;HaplotypeScore=1.5781;MQ=37.00;MQ0=0;MQRankSum=1.237;Map20=1;OAnc=T;QD=34.87;ReadPosRankSum=-1.820;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=931;mSC=0.280;pSC=0.973	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:73.50:1812,73,0:0,0:23,26:0,0:1,1:0:37.00:0;1/1:34:99:1340,102,0:0,0:18,16:0,0:0,0:0:37.00:0	-
18_7016490_G/A	18	7016490	A	ENSG00000101680	ENST00000389658	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	3083	2989	997	P/S	Ccc/Tcc	-	ENSP=ENSP00000374309;PolyPhen=benign(0.313);SIFT=tolerated(0.1);HGNC=LAMA1	G	A/A,A/A	G	G	G	N/N,N/N	rs148593258	1.0	CpG	2.96	0.997	0.688	856	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;BaseQRankSum=-0.848;CAnc=G;CpG;DP=84;Dels=0.01;FS=4.168;GAnc=G;GRP=2.96;HRun=0;HaplotypeScore=1.7884;MQ=37.00;MQ0=0;MQRankSum=1.216;Map20=1;OAnc=G;QD=35.71;ReadPosRankSum=0.479;TS=HPGOMC;TSseq=G,G,G,-,G,G;UR;bSC=856;mSC=0.997;pSC=0.688	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:49:99:1783,101,0:28,19:0,0:0,1:0,0:0:37.00:0;1/1:34:99:1325,102,0:22,12:0,0:0,0:0,0:0:37.00:0	-
18_33736534_C/A	18	33736534	A	ENSG00000134759	ENST00000350494	Transcript	NON_SYNONYMOUS_CODING	1380	1366	456	L/I	Ctt/Att	-	ENSP=ENSP00000316051;PolyPhen=possibly_damaging(0.608);SIFT=tolerated(0.16);HGNC=ELP2	C	A/A,A/A	C	C	C	N/N,N/N	.	1.0	.	5.57	1.000	0.799	530	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.519;CAnc=C;DP=109;Dels=0.00;FS=0.000;GAnc=C;GRP=5.57;HRun=0;HaplotypeScore=1.9984;MQ=38.78;MQ0=0;MQRankSum=-1.572;Map20=1;OAnc=C;QD=36.83;ReadPosRankSum=1.039;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=530;mSC=1.000;pSC=0.799	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:66:99:2464,158,0:26,39:0,1:0,0:0,0:0:38.78:0;1/1:43:99:1700,129,0:22,21:0,0:0,0:0,0:0:37.00:0	+
18_33795714_T/C	18	33795714	C	ENSG00000075643	ENST00000261326	Transcript	NON_SYNONYMOUS_CODING	1592	1571	524	M/T	aTg/aCg	-	ENSP=ENSP00000261326;PolyPhen=benign(0);SIFT=tolerated(0.58);HGNC=MOCOS	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-7.26	0.000	0.005	835	1	AC=4;AF=1.00;AN=4;CAnc=T;DP=60;Dels=0.00;FS=0.000;GAnc=T;GRP=-7.26;HRun=0;HaplotypeScore=1.9995;MQ=37.00;MQ0=0;Map20=1;OAnc=T;QD=38.58;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=835;mSC=0.000;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1383,105,0:0,0:18,17:0,0:0,0:0:37.00:0;1/1:25:75.24:976,75,0:0,0:13,12:0,0:0,0:0:37.00:0	+
18_43535069_G/A	18	43535069	A	ENSG00000152223	ENST00000282041	Transcript	NON_SYNONYMOUS_CODING	334	299	100	T/I	aCa/aTa	-	ENSP=ENSP00000282041;PolyPhen=benign(0.028);SIFT=tolerated(0.3);HGNC=EPG5	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	-0.108	0.000	0.518	474	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=67;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.108;HRun=0;HaplotypeScore=0.0000;MQ=37.68;MQ0=0;Map20=1;OAnc=G;QD=36.40;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=474;mSC=0.000;pSC=0.518	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1416,111,0:21,17:0,0:0,0:0,0:0:37.68:0;1/1:29:87.28:1153,87,0:19,10:0,0:0,0:0,0:0:37.00:0	-
18_44561619_G/C	18	44561619	C	ENSG00000206181	ENST00000332567	Transcript	NON_SYNONYMOUS_CODING	370	17	6	T/S	aCt/aGt	-	ENSP=ENSP00000331302;PolyPhen=benign(0.103);SIFT=tolerated(1);HGNC=TCEB3B	G	C/C,C/C	G	G	G	N/N,N/N	rs61738602	0.94	.	-0.39	.	0.001	570	0.25	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.07;AMR_AF=0.05;AN=4;ASN_AF=0.01;CAnc=G;DP=76;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=G;GRP=-0.39;HRun=0;HaplotypeScore=0.9916;MQ=35.32;MQ0=4;Map20=0.25;OAnc=G;QD=36.29;TS=HPGOMC;TSseq=G,C,G,G,A,G;bSC=570;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1920,150,0:0,0:26,24:0,2:0,0:0:35.32:2;1/1:24:63.18:812,63,0:0,0:7,14:1,1:1,0:0:34.80:2	-
18_46904937_T/C	18	46904937	C	ENSG00000141627	ENST00000269445	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	786	421	141	S/G	Agt/Ggt	-	ENSP=ENSP00000269445;PolyPhen=benign(0);SIFT=tolerated(0.47);HGNC=DYM	T	C/C,C/C	T	T	T	N/N,N/N	rs61729806	0.99	.	1.58	1.000	0.527	715	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AN=4;BaseQRankSum=-1.047;CAnc=T;DP=104;Dels=0.00;FS=0.000;GAnc=T;GRP=1.58;HRun;HaplotypeScore=0.9997;MQ=40.96;MQ0=0;MQRankSum=0.391;Map20=1;OAnc=T;QD=35.06;ReadPosRankSum=2.110;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=715;mSC=1.000;pSC=0.527	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:65:82.18:2312,82,0:0,0:37,25:0,0:2,1:0:40.96:0;1/1:39:37.36:1370,37,0:0,0:19,18:0,0:2,0:0:37.00:0	-
18_47911594_G/T	18	47911594	T	ENSG00000154839	ENST00000285116	Transcript	NON_SYNONYMOUS_CODING	531	320	107	G/V	gGa/gTa	-	ENSP=ENSP00000285116;PolyPhen=benign(0.008);SIFT=tolerated(0.26);HGNC=SKA1	G	T/T,T/T	G	G	G	N/N,N/N	rs78545242	0.96	.	-7.74	0.000	0.868	765	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.03;AN=4;ASN_AF=0.09;CAnc=G;DP=74;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=-7.74;HRun=0;HaplotypeScore=0.9983;MQ=38.16;MQ0=0;Map20=1;OAnc=G;QD=38.33;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=765;mSC=0.000;pSC=0.868	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:51:99:1988,153,0:0,0:0,0:0,0:23,28:0:38.16:0;1/1:23:66.22:880,66,0:0,0:0,0:0,0:13,10:0:37.00:0	+
18_58039276_C/T	18	58039276	T	ENSG00000166603	ENST00000299766	Transcript	NON_SYNONYMOUS_CODING	726	307	103	V/I	Gtc/Atc	-	ENSP=ENSP00000299766;PolyPhen=benign(0.042);SIFT=tolerated(0.23);HGNC=MC4R	C	T/T,T/T	C	C	C	N/N,N/N	rs2229616	0.98	.	5.86	0.760	0.706	898	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.04;AMR_AF=0.01;AN=4;ASN_AF=0.03;CAnc=C;DP=84;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=5.86;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.94;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=898;mSC=0.760;pSC=0.706	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:57:99:2139,163,0:0,0:0,0:0,0:24,33:0:37.00:0;1/1:27:81.26:1054,81,0:0,0:0,0:0,0:12,15:0:37.00:0	-
18_67721492_G/C	18	67721492	C	ENSG00000176225	ENST00000255674	Transcript	NON_SYNONYMOUS_CODING	5128	5060	1687	S/C	tCt/tGt	-	ENSP=ENSP00000255674;PolyPhen=probably_damaging(0.998);SIFT=deleterious(0.01);HGNC=RTTN	G	C/C,C/C	G	G	G	N/N,N/N	rs34717557	0.99	.	4.44	0.997	0.969	702	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;CAnc=G;DP=89;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=4.44;HRun=0;HaplotypeScore=0.9997;MQ=39.17;MQ0=0;Map20=1;OAnc=G;QD=38.41;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=702;mSC=0.997;pSC=0.969	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2107,163,0:0,0:30,24:0,0:0,0:0:39.17:0;1/1:35:99:1373,105,0:0,0:21,14:0,0:0,0:0:37.00:0	-
18_72021145_T/A	18	72021145	A	ENSG00000206043	ENST00000382675	Transcript	NON_SYNONYMOUS_CODING	1910	1643	548	F/Y	tTt/tAt	-	ENSP=ENSP00000372122;PolyPhen=benign(0.179);SIFT=tolerated(0.42);HGNC=C18orf63	T	A/A,A/A	T	T	T	N/N,N/N	rs8093952	0.91	.	0.202	0.000	0.029	891	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.02;AMR_AF=0.15;AN=4;ASN_AF=0.06;CAnc=T;DP=85;Dels=0.00;EUR_AF=0.14;FS=0.000;GAnc=T;GRP=0.202;HRun=0;HaplotypeScore=0.0000;MQ=40.15;MQ0=0;Map20=1;OAnc=T;QD=38.10;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=891;mSC=0.000;pSC=0.029	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2128,166,0:36,19:0,0:0,0:0,0:0:40.15:0;1/1:30:90.29:1189,90,0:16,14:0,0:0,0:0,0:0:37.00:0	+
18_76754549_T/C	18	76754549	C	ENSG00000256463	ENST00000536229	Transcript	NON_SYNONYMOUS_CODING	2558	2558	853	V/A	gTc/gCc	-	ENSP=ENSP00000439975;PolyPhen=benign(0.336);SIFT=tolerated(1);HGNC=SALL3	T	C/C,C/C	T	T	T	N/N,N/N	rs35578880	0.97	.	1.85	0.780	0.862	896	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.06;AN=4;CAnc=T;DP=73;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=T;GRP=1.85;HRun;HaplotypeScore=0.9332;MQ=38.41;MQ0=0;Map20=1;OAnc=T;QD=37.92;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=896;mSC=0.780;pSC=0.862	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1626,126,0:0,0:25,17:0,0:0,0:0:38.41:0;1/1:31:93.29:1200,93,0:0,0:15,16:0,0:0,0:0:37.00:0	+
19_464296_G/A	19	464296	A	ENSG00000181781	ENST00000315489	Transcript	NON_SYNONYMOUS_CODING	654	418	140	P/S	Ccg/Tcg	-	ENSP=ENSP00000318029;PolyPhen=possibly_damaging(0.635);SIFT=tolerated(0.21);HGNC=ODF3L2	G	A/A,A/A	G	G	-	N/N,N/N	.	1	.	.	.	.	994	.	AC=4;AF=1.00;AN=4;BaseQRankSum=1.300;CAnc=G;DP=47;Dels=0.00;FS=3.291;GAnc=G;HRun=0;HaplotypeScore=2.9951;MQ=37.90;MQ0=0;MQRankSum=1.300;OAnc=-;QD=35.08;ReadPosRankSum=-0.758;TS=HPGOMC;TSseq=G,-,G,-,-,-;bSC=994	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:33:57.74:1191,58,0:17,14:0,0:0,1:0,0:0:37.90:0;1/1:14:42.14:554,42,0:7,7:0,0:0,0:0,0:0:37.00:0	-
19_2994072_G/A	19	2994072	A	ENSG00000104953	ENST00000441927	Transcript	NON_SYNONYMOUS_CODING	1580	1222	408	G/S	Ggc/Agc	-	ENSP=ENSP00000402230;PolyPhen=benign(0.001);SIFT=tolerated(0.6);HGNC=TLE6	G	A/A,A/A	G	G	G	N/N,N/N	rs73514575	0.98	CpG	0.521	.	0.007	988	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.10;AMR_AF=0.01;AN=4;CAnc=G;CpG;DP=71;Dels=0.00;FS=0.000;GAnc=G;GRP=0.521;HRun=0;HaplotypeScore=1.5783;MQ=38.92;MQ0=0;Map20=1;OAnc=G;QD=37.37;TS=HPGOM;TSseq=G,G,G,G,A;bSC=988;pSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1752,129,0:21,25:0,0:0,0:0,0:0:38.92:0;1/1:25:75.24:980,75,0:10,15:0,0:0,0:0,0:0:37.00:0	+
19_4902680_C/T	19	4902680	T	ENSG00000205784	ENST00000381781	Transcript	NON_SYNONYMOUS_CODING	200	200	67	S/N	aGt/aAt	-	ENSP=ENSP00000371200;PolyPhen=benign(0.001);SIFT=tolerated(0.42);HGNC=ARRDC5	C	T/T,T/T	C	C	C	N/N,N/N	rs138665621	1.0	.	0.557	0.512	0.027	952	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=C;DP=102;Dels=0.00;FS=0.000;GAnc=C;GRP=0.557;HRun;HaplotypeScore=4.9905;MQ=37.32;MQ0=0;Map20=1;OAnc=C;QD=37.55;TS=HPGOMC;TSseq=C,C,C,C,C,G;bSC=952;mSC=0.512;pSC=0.027	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:63:99:2398,184,0:0,0:0,0:0,0:23,38:0:37.32:0;1/1:39:99:1551,117,0:0,0:0,0:0,0:13,26:0:37.00:0	-
19_5692192_C/T	19	5692192	T	ENSG00000196365	ENST00000358403	Transcript	NON_SYNONYMOUS_CODING	2637	2623	875	V/I	Gtc/Atc	-	ENSP=ENSP00000351177;PolyPhen=benign(0.004);SIFT=tolerated(1);HGNC=LONP1	C	T/T,T/T	C	C	C	N/N,N/N	rs1062373	0.97	CpG	-3.62	0.347	0.851	819	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.02;AN=4;ASN_AF=0.03;CAnc=C;CpG;DP=50;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=C;GRP=-3.62;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.71;TS=HPGOMC;TSseq=C,C,C,C,-,C;bSC=819;mSC=0.347;pSC=0.851	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:84.27:1098,84,0:0,0:0,0:0,0:15,14:0:37.00:0;1/1:21:63.20:819,63,0:0,0:0,0:0,0:13,8:0:37.00:0	-
19_5915314_C/A	19	5915314	A	ENSG00000105519	ENST00000222125	Transcript	NON_SYNONYMOUS_CODING	701	551	184	T/N	aCc/aAc	-	ENSP=ENSP00000222125;PolyPhen=benign(0.001);SIFT=tolerated(0.06);HGNC=CAPS	C	A/A,A/A	C	C	C	N/N,N/N	.	1	.	0.249	0.009	0.931	867	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=68;Dels=0.00;FS=0.000;GAnc=C;GRP=0.249;HRun;HaplotypeScore=0.9665;MQ=39.25;MQ0=0;Map20=1;OAnc=C;QD=35.57;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=867;mSC=0.009;pSC=0.931	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1420,108,0:19,20:0,0:0,0:0,0:0:39.25:0;1/1:29:87.28:1143,87,0:13,16:0,0:0,0:0,0:0:37.00:0	+
19_5917194_A/G	19	5917194	G	ENSG00000031823	ENST00000324807	Transcript	NON_SYNONYMOUS_CODING	1120	1120	374	C/R	Tgc/Cgc	-	ENSP=ENSP00000315894;PolyPhen=possibly_damaging(0.694);SIFT=deleterious(0);HGNC=RANBP3	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-0.644	0.000	0.036	862	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=44;Dels=0.00;FS=0.000;GAnc=A;GRP=-0.644;HRun;HaplotypeScore=1.1567;MQ=36.67;MQ0=0;Map20=1;OAnc=A;QD=37.82;TS=HPGOMC;TSseq=A,A,A,A,A,A;UR;bSC=862;mSC=0.000;pSC=0.036	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:93.29:1206,93,0:0,0:0,0:13,18:0,0:0:36.67:0;1/1:13:39.13:514,39,0:0,0:0,0:6,7:0,0:0:37.00:0	-
19_5962717_C/G	19	5962717	G	ENSG00000031823	ENST00000324807	Transcript	NON_SYNONYMOUS_CODING	4	4	2	D/H	Gat/Cat	-	ENSP=ENSP00000315894;PolyPhen=probably_damaging(0.986);SIFT=deleterious(0);HGNC=RANBP3	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	-0.101	0.001	0.089	889	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=71;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.101;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=39.16;TS=HPGOMC;TSseq=C,C,C,-,C,C;UR;bSC=889;mSC=0.001;pSC=0.089	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1560,117,0:0,0:0,0:20,19:0,0:0:37.00:0;1/1:32:96.31:1268,96,0:0,0:0,0:10,22:0,0:0:37.00:0	-
19_6850767_C/T	19	6850767	T	ENSG00000141968	ENST00000304076	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	2313	2216	739	T/M	aCg/aTg	-	ENSP=ENSP00000302269;PolyPhen=benign(0.021);SIFT=tolerated(0.43);HGNC=VAV1	C	T/T,T/T	C	C	C	N/N,N/N	rs36097961	0.97	CpG	-5.12	0.001	0.613	970	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AMR_AF=0.02;AN=4;BaseQRankSum=0.887;CAnc=C;CpG;DP=73;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=C;GRP=-5.12;HRun=0;HaplotypeScore=0.9997;MQ=37.71;MQ0=0;MQRankSum=1.479;Map20=1;OAnc=C;QD=36.23;ReadPosRankSum=-0.380;TS=HPGOMC;TSseq=C,C,-,C,C,C;bSC=970;mSC=0.001;pSC=0.613	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:83.40:1555,83,0:0,0:0,1:0,0:21,20:0:37.71:0;1/1:31:93.30:1233,93,0:0,0:0,0:0,0:19,12:0:37.00:0	+
19_7437765_A/G	19	7437765	G	ENSG00000263264	ENST00000576789	Transcript	NON_SYNONYMOUS_CODING	492	83	28	Q/R	cAg/cGg	-	ENSP=ENSP00000458866;PolyPhen=probably_damaging(0.971);SIFT=deleterious(0)	A	G/G,G/G	A	A	A	N/N,N/N	rs78885217	0.98	.	2.05	.	.	917	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.07;CAnc=A;DP=56;Dels=0.00;FS=0.000;GAnc=A;GRP=2.05;HRun=3;HaplotypeScore=0.7887;MQ=39.25;MQ0=0;Map20=1;OAnc=A;QD=38.00;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=917	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1515,117,0:0,0:0,0:19,20:0,0:0:39.25:0;1/1:17:51.17:680,51,0:0,0:0,0:11,6:0,0:0:37.00:0	+
19_8973559_T/C	19	8973559	C	ENSG00000181143	ENST00000380951	Transcript	NON_SYNONYMOUS_CODING	2704	2680	894	T/A	Acc/Gcc	-	ENSP=ENSP00000370338;PolyPhen=possibly_damaging(0.889);SIFT=deleterious(0.02);HGNC=MUC16	T	C/C,C/C	T	-	T	N/N,N/N	rs61734967	0.99	.	4.36	0.906	0.365	900	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AN=4;ASN_AF=0.02;BaseQRankSum=1.669;CAnc=T;DP=95;Dels=0.00;FS=3.979;GRP=4.36;HRun=0;HaplotypeScore=1.7256;MQ=38.08;MQ0=0;MQRankSum=1.228;Map20=1;OAnc=T;QD=38.17;ReadPosRankSum=-1.165;TS=HPOM;TSseq=T,T,T,T;bSC=900;mSC=0.906;pSC=0.365	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:55:99:2132,139,0:0,0:21,33:0,0:0,0:0:38.08:0;1/1:40:99:1541,120,0:0,0:17,23:0,0:0,0:0:37.00:0	-
19_8976362_C/T	19	8976362	T	ENSG00000181143	ENST00000380951	Transcript	NON_SYNONYMOUS_CODING	2413	2389	797	G/R	Ggg/Agg	-	ENSP=ENSP00000370338;PolyPhen=probably_damaging(0.999);SIFT=tolerated(0.82);HGNC=MUC16	C	T/T,T/T	C	-	C	N/N,N/N	rs116913217	1.0	CpG	0.43	0.000	0.301	911	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.02;CAnc=C;CpG;DP=62;Dels=0.00;FS=0.000;GRP=0.43;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.72;TS=HPOM;TSseq=C,N,C,C;bSC=911;mSC=0.000;pSC=0.301	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1429,111,0:0,0:0,0:0,0:13,24:0:37.00:0;1/1:25:75.22:973,75,0:0,0:0,0:0,0:11,14:0:37.00:0	-
19_10449514_T/C	19	10449514	C	ENSG00000076662	ENST00000160262	Transcript	NON_SYNONYMOUS_CODING	242	187	63	I/V	Atc/Gtc	-	ENSP=ENSP00000160262;PolyPhen=benign(0.017);SIFT=tolerated(0.69);HGNC=ICAM3	T	C/C,C/C	T	T	T	N/N,N/N	rs17697947	0.99	.	-5.54	0.000	0.001	745	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.04;CAnc=T;DP=65;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=-5.54;HRun=0;HaplotypeScore=0.0000;MQ=37.69;MQ0=0;Map20=1;OAnc=T;QD=37.62;TS=HPGOMC;TSseq=T,T,T,T,T,C;bSC=745;mSC=0.000;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:99:1651,126,0:0,0:14,27:0,0:1,0:0:37.69:0;1/1:22:66.22:880,66,0:0,0:11,11:0,0:0,0:0:37.00:0	-
19_10531609_C/T	19	10531609	T	ENSG00000065989	ENST00000352831	Transcript	NON_SYNONYMOUS_CODING	277	169	57	R/W	Cgg/Tgg	-	ENSP=ENSP00000270474;PolyPhen=benign(0.144);SIFT=deleterious(0.01);HGNC=PDE4A	C	T/T,T/T	C	C	C	N/N,N/N	.	0.99	CpG	2.73	.	0.783	737	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AN=4;ASN_AF=0.04;CAnc=C;CpG;DP=32;Dels=0.00;FS=0.000;GAnc=C;GRP=2.73;HRun=0;HaplotypeScore=0.0000;MQ=36.47;MQ0=0;Map20=1;OAnc=C;QD=32.35;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=737;pSC=0.783	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:19:51.14:648,51,0:0,0:0,0:0,0:11,7:0:36.47:0;1/1:13:36.12:472,36,0:0,0:0,0:0,0:6,7:0:37.00:0	+
19_11541539_G/C	19	11541539	C	ENSG00000198003	ENST00000356392	Transcript	NON_SYNONYMOUS_CODING	567	424	142	L/V	Ctg/Gtg	-	ENSP=ENSP00000348757;PolyPhen=possibly_damaging(0.555);SIFT=tolerated(0.1);HGNC=CCDC151	G	C/C,C/C	G	G	G	N/N,N/N	rs61739927	0.98	.	0.467	0.651	0.319	814	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AN=4;ASN_AF=0.01;BaseQRankSum=0.603;CAnc=G;DP=66;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=0.467;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=1.657;Map20=1;OAnc=G;QD=36.51;ReadPosRankSum=0.904;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=814;mSC=0.651;pSC=0.319	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:98.42:1712,98,0:0,0:19,26:0,1:0,0:0:37.00:0;1/1:20:60.19:792,60,0:0,0:11,9:0,0:0,0:0:37.00:0	-
19_12868550_C/T	19	12868550	T	ENSG00000039987	ENST00000042931	Transcript	NON_SYNONYMOUS_CODING	1189	1189	397	L/F	Ctc/Ttc	-	ENSP=ENSP00000042931;PolyPhen=benign(0.008);SIFT=tolerated(0.32);HGNC=BEST2	C	T/T,T/T	C	C	-	N/N,N/N	rs61737519	0.99	.	4.97	.	0.878	592	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.04;AMR_AF=0.01;AN=4;CAnc=C;DP=49;Dels=0.00;FS=0.000;GAnc=C;GRP=4.97;HRun;HaplotypeScore=3.9965;MQ=37.51;MQ0=0;Map20=1;QD=37.09;TS=HPGC;TSseq=C,C,C,C;bSC=592;pSC=0.878	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1479,114,0:0,0:0,0:0,0:14,24:0:37.51:0;1/1:10:30.09:380,30,0:0,0:0,0:0,0:6,4:0:37.00:0	+
19_14024068_C/G	19	14024068	G	ENSG00000132024	ENST00000318003	Transcript	NON_SYNONYMOUS_CODING	765	466	156	Q/E	Caa/Gaa	-	ENSP=ENSP00000313601;PolyPhen=benign(0.177);SIFT=tolerated(1);HGNC=CC2D1A	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	4.91	0.035	0.380	819	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=57;Dels=0.00;FS=0.000;GAnc=C;GRP=4.91;HRun=0;HaplotypeScore=0.7887;MQ=37.88;MQ0=0;Map20=1;OAnc=C;QD=38.90;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=819;mSC=0.035;pSC=0.380	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1355,102,0:0,0:0,0:21,13:0,0:0:37.88:0;1/1:23:69.23:920,69,0:0,0:0,0:14,9:0,0:0:37.00:0	+
19_15291576_C/G	19	15291576	G	ENSG00000074181	ENST00000263388	Transcript	NON_SYNONYMOUS_CODING	3134	3058	1020	A/P	Gcc/Ccc	-	ENSP=ENSP00000263388;PolyPhen=benign(0.094);SIFT=tolerated(0.22);HGNC=NOTCH3	C	G/G,G/G	C	C	C	N/N,N/N	rs35769976	0.92	.	1.44	.	0.885	851	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.30;AMR_AF=0.06;AN=4;CAnc=C;DP=53;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=1.44;HRun=2;HaplotypeScore=0.0000;MQ=37.88;MQ0=0;Map20=1;OAnc=C;QD=38.51;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=851;pSC=0.885	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:34:99:1342,102,0:0,0:0,0:15,19:0,0:0:37.88:0;1/1:19:57.18:734,57,0:0,0:0,0:7,12:0,0:0:37.00:0	-
19_17305781_T/G	19	17305781	G	ENSG00000099331	ENST00000397274	Transcript	NON_SYNONYMOUS_CODING	3607	3545	1182	V/G	gTc/gGc	-	ENSP=ENSP00000380444;PolyPhen=benign(0.01);SIFT=tolerated(0.36);HGNC=MYO9B	T	G/G,G/G	T	T	T	N/N,N/N	rs45541337	0.93	.	1.95	0.000	0.142	784	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.25;AMR_AF=0.04;AN=4;CAnc=T;DP=55;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=T;GRP=1.95;HRun=3;HaplotypeScore=3.9578;MQ=38.96;MQ0=0;Map20=1;OAnc=T;QD=37.57;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=784;mSC=0.000;pSC=0.142	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1348,105,0:0,0:0,0:15,19:0,0:0:38.96:0;1/1:20:60.20:800,60,0:0,0:0,0:9,11:0,0:0:37.00:0	+
19_18377835_C/T	19	18377835	T	ENSG00000130518	ENST00000358422	Transcript	NON_SYNONYMOUS_CODING	512	512	171	R/H	cGc/cAc	-	ENSP=ENSP00000351198;PolyPhen=probably_damaging(0.992);SIFT=deleterious(0.01);HGNC=KIAA1683	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG	2.19	0.970	0.168	934	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.452;CAnc=C;CpG;DP=74;Dels=0.00;FS=0.000;GAnc=C;GRP=2.19;HRun=0;HaplotypeScore=0.9997;MQ=38.24;MQ0=0;MQRankSum=0.979;Map20=1;OAnc=C;QD=35.70;ReadPosRankSum=-1.431;TS=HPGO;TSseq=C,C,C,C;bSC=934;mSC=0.970;pSC=0.168	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:98.44:1747,98,0:0,0:0,1:0,0:21,26:0:38.24:0;1/1:26:78.25:1027,78,0:0,0:0,0:0,0:10,16:0:37.00:0	-
19_19038985_C/G	19	19038985	G	ENSG00000105671	ENST00000247003	Transcript	NON_SYNONYMOUS_CODING	1379	1312	438	Q/E	Cag/Gag	-	ENSP=ENSP00000247003;PolyPhen=benign(0.001);SIFT=tolerated(0.49);HGNC=DDX49	C	G/G,G/G	C	-	C	N/N,N/N	.	1	.	3.65	1.000	0.918	906	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=57;Dels=0.00;FS=0.000;GRP=3.65;HRun;HaplotypeScore=0.0000;MQ=37.81;MQ0=0;Map20=1;OAnc=C;QD=38.64;TS=HPO;TSseq=C,C,C;UR;bSC=906;mSC=1.000;pSC=0.918	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1463,111,0:0,0:0,0:22,15:0,0:0:37.81:0;1/1:20:60.19:791,60,0:0,0:0,0:9,11:0,0:0:37.00:0	+
19_23927979_C/G	19	23927979	G	ENSG00000196172	ENST00000395385	Transcript	NON_SYNONYMOUS_CODING	313	166	56	G/R	Gga/Cga	-	ENSP=ENSP00000378783;PolyPhen=benign(0.008);SIFT=tolerated(0.73);HGNC=ZNF681	C	G/G,G/G	C	C	C	N/N,N/N	.	1	.	1.23	.	.	.	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=97;Dels=0.00;FS=0.000;GAnc=C;GRP=1.23;HRun=0;HaplotypeScore=2.9807;MQ=38.51;MQ0=0;Map20=1;OAnc=C;QD=36.93;TS=HPGO;TSseq=C,C,C,C	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2286,178,0:0,1:0,0:23,35:0,0:0:38.51:0;1/1:36:99:1377,108,0:0,0:0,0:13,23:0,0:0:35.80:0	-
19_35617582_G/C	19	35617582	C	ENSG00000153902	ENST00000392225	Transcript	NON_SYNONYMOUS_CODING	1488	968	323	P/R	cCa/cGa	-	ENSP=ENSP00000376059;PolyPhen=unknown(0);HGNC=LGI4	G	C/C,C/C	G	G	G	N/N,N/N	.	1.0	.	1.82	0.004	0.918	.	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.00;AN=4;ASN_AF=0.01;CAnc=G;DP=48;Dels=0.00;FS=0.000;GAnc=G;GRP=1.82;HRun=0;HaplotypeScore=0.0000;MQ=36.87;MQ0=0;Map20=1;OAnc=G;QD=37.93;TS=HPGOMC;TSseq=G,G,G,G,G,G;mSC=0.004;pSC=0.918	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1437,111,0:0,0:21,16:0,0:0,0:0:36.87:0;1/1:11:33.11:440,33,0:0,0:6,5:0,0:0,0:0:37.00:0	-
19_38055553_T/C	19	38055553	C	ENSG00000180479	ENST00000328550	Transcript	NON_SYNONYMOUS_CODING	1877	1777	593	K/E	Aaa/Gaa	-	ENSP=ENSP00000333660;PolyPhen=probably_damaging(0.982);SIFT=deleterious(0.03);HGNC=ZNF571	T	C/C,C/C	T	T	T	N/N,N/N	rs16973890	0.97	.	3.67	0.006	0.317	638	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.04;AMR_AF=0.06;AN=4;ASN_AF=0.04;BaseQRankSum=0.111;CAnc=T;DP=71;Dels=0.00;FS=0.000;GAnc=T;GRP=3.67;HRun=0;HaplotypeScore=0.0000;MQ=39.48;MQ0=0;MQRankSum=1.290;Map20=1;OAnc=T;QD=36.47;ReadPosRankSum=0.037;TS=HPGOM;TSseq=T,T,T,T,T;UR;bSC=638;mSC=0.006;pSC=0.317	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1747,101,0:0,0:29,17:0,0:1,0:0:39.48:0;1/1:24:72.23:938,72,0:0,0:14,10:0,0:0,0:0:37.00:0	-
19_38876688_C/T	19	38876688	T	ENSG00000179168	ENST00000334928	Transcript	NON_SYNONYMOUS_CODING	1349	1214	405	R/K	aGg/aAg	-	ENSP=ENSP00000334940;PolyPhen=unknown(0);SIFT=deleterious(0);HGNC=GGN	C	T/T,T/T	C	C	C	N/N,N/N	rs80351552	0.98	.	2.39	0.997	0.183	616	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.04;AN=4;ASN_AF=0.03;CAnc=C;DP=38;Dels=0.00;FS=0.000;GAnc=C;GRP=2.39;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=36.96;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=616;mSC=0.997;pSC=0.183	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:24:69.23:920,69,0:0,0:0,0:0,0:11,13:0:37.00:0;1/1:14:42.13:534,42,0:0,0:0,0:0,0:8,6:0:37.00:0	-
19_39401436_C/T	19	39401436	T	ENSG00000262484	ENST00000571838	Transcript	NON_SYNONYMOUS_CODING	478	478	160	E/K	Gag/Aag	-	ENSP=ENSP00000460665;PolyPhen=benign(0.019)	C	T/T,T/T	C	C	C	N/N,N/N	.	1	.	4.11	.	0.005	680	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=69;Dels=0.00;FS=0.000;GAnc=C;GRP=4.11;HRun;HaplotypeScore=2.9992;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.06;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=680;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1775,135,0:0,0:0,0:0,0:24,22:0:37.00:0;1/1:22:60.19:784,60,0:0,0:0,0:0,0:12,10:0:37.00:0	-
19_40886742_C/T	19	40886742	T	ENSG00000160396	ENST00000291823	Transcript	NON_SYNONYMOUS_CODING	1441	1156	386	A/T	Gca/Aca	-	ENSP=ENSP00000291823;PolyPhen=benign(0.001);SIFT=tolerated(0.12);HGNC=HIPK4	C	T/T,T/T	C	C	C	N/N,N/N	rs56365273	0.97	CpG	-4.33	0.000	0.012	557	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.15;AN=4;CAnc=C;CpG;DP=45;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-4.33;HRun=0;HaplotypeScore=1.9995;MQ=39.50;MQ0=0;Map20=1;OAnc=C;QD=32.23;TS=HPGOMC;TSseq=C,C,C,A,C,CAGT;UR;bSC=557;mSC=0.000;pSC=0.012	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:90.26:1161,90,0:0,0:0,0:0,0:18,17:0:39.50:0;1/1:10:30.10:400,30,0:0,0:0,0:0,0:4,6:0:37.00:0	-
19_42506598_C/T	19	42506598	T	ENSG00000105737	ENST00000301218	Transcript	NON_SYNONYMOUS_CODING	2650	2615	872	R/H	cGt/cAt	-	ENSP=ENSP00000301218;PolyPhen=benign(0.09);SIFT=tolerated(0.12);HGNC=GRIK5	C	T/T,T/T	C	C	C	N/N,N/N	.	1	CpG,RM	1.41	.	0.184	451	1	AC=4;AF=1.00;AN=4;CAnc=C;CpG;DP=61;Dels=0.00;FS=0.000;GAnc=C;GRP=1.41;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=37.35;RM;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=451;pSC=0.184	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1415,108,0:0,0:0,0:0,0:20,16:0:37.00:0;1/1:24:72.24:954,72,0:0,0:0,0:0,0:11,13:0:37.00:0	-
19_44833468_G/T	19	44833468	T	ENSG00000062370	ENST00000253426	Transcript	NON_SYNONYMOUS_CODING	941	857	286	T/K	aCa/aAa	-	ENSP=ENSP00000253426;PolyPhen=benign(0.014);SIFT=tolerated(0.91);HGNC=ZFP112	G	T/T,T/T	G	G	G	N/N,N/N	rs10419604	0.98	.	-0.234	0.000	0.016	569	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;CAnc=G;DP=69;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.234;HRun;HaplotypeScore=0.9997;MQ=39.09;MQ0=0;Map20=1;OAnc=G;QD=37.81;TS=HPGO;TSseq=G,G,G,G;UR;bSC=569;mSC=0.000;pSC=0.016	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:42:99:1621,126,0:0,0:0,0:0,0:19,23:0:39.09:0;1/1:27:81.26:1057,81,0:0,0:0,0:0,0:16,11:0:37.00:0	-
19_44833840_C/T	19	44833840	T	ENSG00000062370	ENST00000253426	Transcript	NON_SYNONYMOUS_CODING	569	485	162	G/E	gGg/gAg	-	ENSP=ENSP00000253426;PolyPhen=probably_damaging(0.972);SIFT=tolerated(0.43);HGNC=ZFP112	C	T/T,T/T	C	C	C	N/N,N/N	rs16978965	0.98	.	-3.47	0.000	0.965	569	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.07;AMR_AF=0.01;AN=4;BaseQRankSum=1.102;CAnc=C;DP=73;Dels=0.00;FS=4.130;GAnc=C;GRP=-3.47;HRun=0;HaplotypeScore=0.0000;MQ=39.00;MQ0=0;MQRankSum=-0.315;Map20=1;OAnc=C;QD=37.02;ReadPosRankSum=-1.339;TS=HPGO;TSseq=C,C,C,C;UR;bSC=569;mSC=0.000;pSC=0.965	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:44:92.42:1662,92,0:0,0:1,0:0,0:16,27:0:39.00:0;1/1:29:87.28:1148,87,0:0,0:0,0:0,0:17,12:0:37.00:0	-
19_48543969_C/T	19	48543969	T	ENSG00000105507	ENST00000293255	Transcript	NON_SYNONYMOUS_CODING	256	131	44	R/Q	cGa/cAa	-	ENSP=ENSP00000293255;PolyPhen=benign(0.002);SIFT=tolerated(0.33);HGNC=CABP5	C	T/T,T/T	C	C	C	N/N,N/N	rs111484042	0.98	CpG	3.32	.	0.105	929	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.02;AN=4;BaseQRankSum=-0.133;CAnc=C;CpG;DP=90;Dels=0.00;FS=0.000;GAnc=C;GRP=3.32;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;MQRankSum=0.133;Map20=1;OAnc=C;QD=36.13;ReadPosRankSum=-0.466;TS=HPGOM;TSseq=C,C,C,-,C;bSC=929;pSC=0.105	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:1984,117,0:0,0:0,1:0,0:25,27:0:37.00:0;1/1:36:99:1392,108,0:0,0:0,0:0,0:12,24:0:37.00:0	-
19_49436982_G/C	19	49436982	C	ENSG00000104808	ENST00000221403	Transcript	NON_SYNONYMOUS_CODING	44	4	2	A/P	Gcg/Ccg	-	ENSP=ENSP00000221403;PolyPhen=benign(0.228);SIFT=deleterious(0);HGNC=DHDH	G	C/C,C/C	G	G	G	N/N,N/N	rs10401800	0.94	.	3.29	0.975	0.005	840	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.25;AMR_AF=0.03;AN=4;BaseQRankSum=1.571;CAnc=G;DP=61;Dels=0.00;FS=0.000;GAnc=G;GRP=3.29;HRun;HaplotypeScore=0.9967;MQ=38.38;MQ0=0;MQRankSum=1.410;Map20=1;OAnc=G;QD=37.18;ReadPosRankSum=1.088;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=840;mSC=0.975;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:43:98.82:1632,99,0:0,0:24,18:1,0:0,0:0:38.38:0;1/1:18:54.17:711,54,0:0,0:7,11:0,0:0,0:0:37.00:0	+
19_49714497_C/T	19	49714497	T	ENSG00000130529	ENST00000252826	Transcript	NON_SYNONYMOUS_CODING	3683	3611	1204	P/L	cCg/cTg	-	ENSP=ENSP00000252826;PolyPhen=unknown(0);SIFT=tolerated(0.4);HGNC=TRPM4	C	T/T,T/T	C	C	C	N/N,N/N	rs150391806	1.0	CpG	2.49	.	0.269	846	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.00;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=45;Dels=0.00;FS=0.000;GAnc=C;GRP=2.49;HRun=0;HaplotypeScore=0.0000;MQ=36.66;MQ0=0;Map20=1;OAnc=C;QD=36.76;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=846;pSC=0.269	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:87.28:1136,87,0:0,0:0,0:0,0:20,10:0:36.66:0;1/1:15:45.14:582,45,0:0,0:0,0:0,0:9,6:0:37.00:0	+
19_54599402_C/G	19	54599402	G	ENSG00000170909	ENST00000391760	Transcript	NON_SYNONYMOUS_CODING	266	217	73	V/L	Gtc/Ctc	-	ENSP=ENSP00000375640;PolyPhen=unknown(0);HGNC=OSCAR	C	G/G,G/G	C	C	C	N/N,N/N	rs184721988	0.98	CpG	-7.78	0.000	.	946	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.09;AN=4;ASN_AF=0.01;CAnc=C;CpG;DP=35;Dels=0.00;FS=0.000;GAnc=C;GRP=-7.78;HRun=2;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=35.16;TS=HPGOMC;TSseq=C,C,-,C,-,C;bSC=946;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:17:48.15:631,48,0:1,0:0,0:11,5:0,0:0:37.00:0;1/1:18:51.15:646,51,0:0,0:0,0:7,11:0,0:0:37.00:0	-
19_54872698_C/G	19	54872698	G	ENSG00000167613	ENST00000313038	Transcript	NON_SYNONYMOUS_CODING	342	168	56	E/D	gaG/gaC	-	ENSP=ENSP00000319204;PolyPhen=possibly_damaging(0.738);SIFT=tolerated(0.19);HGNC=LAIR1	C	G/G,G/G	C	C	-	N/N,N/N	rs3745442	0.98	.	-5.97	0.000	.	982	0.5	1000gALT=G;AC=4;AF=1.00;AF1000g=0.02;AN=4;ASN_AF=0.05;BaseQRankSum=-1.200;CAnc=C;DP=76;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=-5.97;HRun=0;HaplotypeScore=2.9974;MQ=37.48;MQ0=0;MQRankSum=0.400;Map20=0.5;QD=35.89;ReadPosRankSum=-0.400;TS=HPG;TSseq=C,C,-;bSC=982;mSC=0.000	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:77.36:1433,77,0:0,0:1,0:19,19:0,0:0:37.48:0;1/1:37:99:1437,111,0:0,0:0,0:18,19:0,0:0:36.69:0	-
19_55898080_G/A	19	55898080	A	ENSG00000108107	ENST00000431533	Transcript	STOP_GAINED	266	224	75	W/*	tGg/tAg	-	ENSP=ENSP00000400596;HGNC=RPL28	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	1.2	.	0.011	906	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=60;Dels=0.00;FS=0.000;GAnc=G;GRP=1.2;HRun=0;HaplotypeScore=0.9997;MQ=37.79;MQ0=0;Map20=1;OAnc=G;QD=35.58;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=906;pSC=0.011	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1385,105,0:10,28:0,0:0,0:0,0:0:37.79:0;1/1:22:66.21:864,66,0:14,8:0,0:0,0:0,0:0:37.00:0	+
19_56473458_C/T	19	56473458	T	ENSG00000179709	ENST00000291971	Transcript	NON_SYNONYMOUS_CODING	2139	2068	690	R/C	Cgt/Tgt	-	ENSP=ENSP00000291971;PolyPhen=benign(0);SIFT=tolerated(0.19);HGNC=NLRP8	C	T/T,T/T	C	C	C	N/N,N/N	rs75864168	0.97	CpG	-3.74	0.000	0.007	988	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.04;AMR_AF=0.03;AN=4;ASN_AF=0.06;CAnc=C;CpG;DP=70;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.74;HRun;HaplotypeScore=0.0000;MQ=38.96;MQ0=0;Map20=1;OAnc=C;QD=37.53;TS=HPGOM;TSseq=C,C,C,C,T;UR;bSC=988;mSC=0.000;pSC=0.007	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1534,117,0:0,0:0,0:0,0:21,19:0:38.96:0;1/1:30:90.28:1178,90,0:0,0:0,0:0,0:16,14:0:37.00:0	+
20_2376080_C/A	20	2376080	A	ENSG00000166948	ENST00000202625	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	483	422	141	A/E	gCa/gAa	-	ENSP=ENSP00000202625;PolyPhen=benign(0.002);SIFT=deleterious(0.01);HGNC=TGM6	C	A/A,A/A	C	C	C	N/N,N/N	rs73894929	0.98	.	4.33	0.989	0.629	884	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.08;AMR_AF=0.01;AN=4;CAnc=C;DP=79;Dels=0.00;FS=0.000;GAnc=C;GRP=4.33;HRun;HaplotypeScore=0.9997;MQ=38.24;MQ0=0;Map20=1;OAnc=C;QD=37.71;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=884;mSC=0.989;pSC=0.629	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1843,141,0:18,29:0,0:0,0:0,0:0:38.24:0;1/1:31:93.29:1218,93,0:20,11:0,0:0,0:0,0:0:37.00:0	+
20_19956311_G/A	20	19956311	A	ENSG00000132669	ENST00000255006	Transcript	NON_SYNONYMOUS_CODING	1938	1789	597	V/M	Gtg/Atg	-	ENSP=ENSP00000255006;PolyPhen=probably_damaging(0.953);SIFT=deleterious(0.02);HGNC=RIN2	G	A/A,A/A	G	G	G	N/N,N/N	rs181298473	0.99	CpG	4.88	0.998	0.969	875	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.02;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=G;CpG;DP=70;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=4.88;HRun=0;HaplotypeScore=2.9628;MQ=37.66;MQ0=0;Map20=1;OAnc=G;QD=34.95;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=875;mSC=0.998;pSC=0.969	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1606,123,0:23,19:0,0:0,0:1,0:0:37.66:0;1/1:25:75.24:981,75,0:13,12:0,0:0,0:0,0:0:37.00:0	+
20_24944641_C/A	20	24944641	A	ENSG00000101474	ENST00000447138	Transcript	NON_SYNONYMOUS_CODING	902	866	289	R/L	cGg/cTg	-	ENSP=ENSP00000415373;PolyPhen=unknown(0);HGNC=C20orf3	C	A/A,A/A	C	C	C	N/N,N/N	rs11550622	1.0	CpG	-4.82	0.972	0.893	696	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AFR_AF=0.01;AN=4;CAnc=C;CpG;DP=80;Dels=0.00;FS=0.000;GAnc=C;GRP=-4.82;HRun=0;HaplotypeScore=0.0000;MQ=37.53;MQ0=0;Map20=1;OAnc=C;QD=38.50;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=696;mSC=0.972;pSC=0.893	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:56:99:2189,166,0:36,20:0,0:0,0:0,0:0:37.53:0;1/1:24:72.23:941,72,0:9,15:0,0:0,0:0,0:0:36.58:0	-
20_31814277_C/T	20	31814277	T	ENSG00000131059	ENST00000375452	Transcript	NON_SYNONYMOUS_CODING	679	494	165	P/L	cCa/cTa	-	ENSP=ENSP00000364601;PolyPhen=probably_damaging(0.999);SIFT=deleterious(0);HGNC=BPIFA3	C	T/T,T/T	C	C	C	N/N,N/N	rs74640466	0.98	.	3.78	0.203	0.055	636	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.05;AN=4;ASN_AF=0.03;CAnc=C;DP=96;Dels=0.00;FS=0.000;GAnc=C;GRP=3.78;HRun=0;HaplotypeScore=1.9971;MQ=38.71;MQ0=0;Map20=1;OAnc=C;QD=36.78;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=636;mSC=0.203;pSC=0.055	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:69:99:2571,196,0:0,0:0,0:0,0:35,33:0:38.71:0;1/1:27:41.26:1000,41,0:0,0:0,1:0,0:11,15:1:37.00:0	+
20_34214173_G/A	20	34214173	A	ENSG00000214078	ENST00000317619	Transcript	NON_SYNONYMOUS_CODING	1999	1604	535	P/L	cCc/cTc	-	ENSP=ENSP00000326126;PolyPhen=benign(0.105);SIFT=deleterious(0);HGNC=CPNE1	G	A/A,A/A	G	G	G	N/N,N/N	rs11543239	0.94	.	5.55	0.003	0.115	109	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.13;AMR_AF=0.04;AN=4;ASN_AF=0.04;CAnc=G;DP=60;Dels=0.00;EUR_AF=0.06;FS=0.000;GAnc=G;GRP=5.55;HRun=0;HaplotypeScore=0.9997;MQ=37.81;MQ0=0;Map20=1;OAnc=G;QD=36.91;TS=HPGOMC;TSseq=G,G,G,G,G,G;UR;bSC=109;mSC=0.003;pSC=0.115	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:37:99:1399,108,0:16,21:0,0:0,0:0,0:0:37.81:0;1/1:23:69.22:891,69,0:13,10:0,0:0,0:0,0:0:37.00:0	-
20_39802851_G/A	20	39802851	A	ENSG00000124181	ENST00000244007	Transcript	NON_SYNONYMOUS_CODING	3930	3733	1245	A/T	Gcc/Acc	-	ENSP=ENSP00000244007;PolyPhen=benign(0.001);SIFT=tolerated(0.83);HGNC=PLCG1	G	A/A,A/A	G	G	G	N/N,N/N	rs144676152	1.0	.	2.16	1.000	0.963	219	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.00;AN=4;BaseQRankSum=1.377;CAnc=G;DP=67;Dels=0.00;FS=3.010;GAnc=G;GRP=2.16;HRun;HaplotypeScore=0.0000;MQ=39.20;MQ0=0;MQRankSum=0.666;Map20=1;OAnc=G;QD=35.02;ReadPosRankSum=-1.288;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=219;mSC=1.000;pSC=0.963	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:80.94:1434,81,0:19,20:0,0:0,1:0,0:0:39.20:0;1/1:27:51.63:981,52,0:14,12:0,0:1,0:0,0:0:36.63:0	+
20_43836336_G/A	20	43836336	A	ENSG00000124233	ENST00000244069	Transcript	NON_SYNONYMOUS_CODING	455	398	133	G/D	gGc/gAc	-	ENSP=ENSP00000244069;PolyPhen=probably_damaging(0.999);SIFT=tolerated(0.09);HGNC=SEMG1	G	A/A,A/A	G	G	G	N/N,N/N	.	1	.	-0.153	0.000	0.029	711	1	AC=4;AF=1.00;AN=4;CAnc=G;DP=99;Dels=0.00;FS=0.000;GAnc=G;GRP=-0.153;HRun=0;HaplotypeScore=0.9997;MQ=39.47;MQ0=0;Map20=1;OAnc=G;QD=38.50;TS=HPGOMC;TSseq=G,G,-,G,G,G;UR;bSC=711;mSC=0.000;pSC=0.029	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:59:99:2305,178,0:32,27:0,0:0,0:0,0:0:39.47:0;1/1:40:99:1550,120,0:15,25:0,0:0,0:0,0:0:37.00:0	+
20_44511257_G/A	20	44511257	A	ENSG00000168612	ENST00000372520	Transcript	STOP_GAINED	107	26	9	W/*	tGg/tAg	-	ENSP=ENSP00000361598;HGNC=ZSWIM1	G	A/A,A/A	G	G	G	N/N,N/N	rs35972756	0.99	.	0.395	0.000	0.072	260	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.02;AN=4;ASN_AF=0.01;CAnc=G;DP=62;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=G;GRP=0.395;HRun=0;HaplotypeScore=1.9913;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=38.02;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=260;mSC=0.000;pSC=0.072	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:40:99:1554,117,0:19,21:0,0:0,0:0,0:0:37.00:0;1/1:22:66.22:876,66,0:11,11:0,0:0,0:0,0:0:37.00:0	+
20_44637624_C/T	20	44637624	T	ENSG00000100985	ENST00000372330	Transcript	NON_SYNONYMOUS_CODING	78	59	20	A/V	gCc/gTc	-	ENSP=ENSP00000361405;PolyPhen=possibly_damaging(0.51);SIFT=tolerated(0.23);HGNC=MMP9	C	T/T,T/T	C	C	C	N/N,N/N	rs1805088	0.96	.	2.59	0.161	0.053	455	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.11;AN=4;ASN_AF=0.04;CAnc=C;DP=45;Dels=0.02;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=2.59;HRun=0;HaplotypeScore=1.9662;MQ=38.64;MQ0=0;Map20=1;OAnc=C;QD=36.78;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=455;mSC=0.161;pSC=0.053	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:29:87.28:1136,87,0:0,0:0,0:0,0:15,14:0:38.64:0;1/1:15:45.15:594,45,0:0,0:0,0:0,0:9,6:0:37.00:0	+
20_55052111_A/G	20	55052111	G	ENSG00000022277	ENST00000023939	Transcript	NON_SYNONYMOUS_CODING	436	329	110	K/R	aAg/aGg	-	ENSP=ENSP00000023939;PolyPhen=benign(0.011);SIFT=tolerated(0.43);HGNC=C20orf43	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	4.58	0.992	0.773	768	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=75;Dels=0.00;FS=0.000;GAnc=A;GRP=4.58;HRun;HaplotypeScore=1.9995;MQ=38.88;MQ0=0;Map20=1;OAnc=A;QD=37.68;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=768;mSC=0.992;pSC=0.773	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1804,138,0:0,0:0,0:27,19:1,0:0:38.88:0;1/1:28:81.27:1080,81,0:0,0:0,0:18,10:0,0:0:37.00:0	+
20_55949894_C/G	20	55949894	G	ENSG00000101146	ENST00000527947	Transcript	NON_SYNONYMOUS_CODING	1235	1057	353	Q/E	Cag/Gag	-	ENSP=ENSP00000432609;PolyPhen=benign(0);SIFT=tolerated(0.16);HGNC=RAE1	C	G/G,G/G	C	C	C	N/N,N/N	rs41304419	0.97	.	-0.768	0.000	0.004	717	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.08;AMR_AF=0.02;AN=4;BaseQRankSum=-1.436;CAnc=C;DP=52;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=C;GRP=-0.768;HRun=2;HaplotypeScore=1.9916;MQ=38.10;MQ0=0;MQRankSum=-0.446;Map20=1;OAnc=C;QD=35.25;ReadPosRankSum=-0.644;TS=HPGOMC;TSseq=C,C,C,C,T,C;bSC=717;mSC=0.000;pSC=0.004	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:65.33:1302,65,0:1,0:1,0:18,16:0,0:0:38.10:0;1/1:16:48.15:626,48,0:0,0:0,0:7,9:0,0:0:37.00:0	+
20_57242352_T/C	20	57242352	C	ENSG00000124222	ENST00000361770	Transcript	NON_SYNONYMOUS_CODING	823	88	30	S/P	Tca/Cca	-	ENSP=ENSP00000355408;PolyPhen=benign(0.16);SIFT=tolerated(0.07);HGNC=STX16	T	C/C,C/C	T	T	T	N/N,N/N	.	1	.	-1.54	0.000	0.883	747	1	AC=4;AF=1.00;AN=4;BaseQRankSum=-0.540;CAnc=T;DP=84;Dels=0.00;FS=0.000;GAnc=T;GRP=-1.54;HRun;HaplotypeScore=0.9997;MQ=39.39;MQ0=0;MQRankSum=-1.278;Map20=1;OAnc=T;QD=37.48;ReadPosRankSum=1.392;TS=HPGOMC;TSseq=T,T,T,T,T,T;UR;bSC=747;mSC=0.000;pSC=0.883	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:61:99:2319,144,0:0,0:42,18:0,0:1,0:0:39.39:0;1/1:23:69.22:905,69,0:0,0:14,9:0,0:0,0:0:37.00:0	+
20_57769097_C/A	20	57769097	A	ENSG00000124203	ENST00000371030	Transcript	NON_SYNONYMOUS_CODING	3023	3023	1008	P/H	cCc/cAc	-	ENSP=ENSP00000360069;PolyPhen=possibly_damaging(0.554);SIFT=deleterious(0.01);HGNC=ZNF831	C	A/A,A/A	C	C	C	N/N,N/N	.	1	.	-0.439	0.000	0.001	833	1	AC=4;AF=1.00;AN=4;CAnc=C;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=-0.439;HRun=0;HaplotypeScore=0.0000;MQ=37.55;MQ0=0;Map20=1;OAnc=C;QD=36.78;TS=HPGO;TSseq=C,G,C,C;UR;bSC=833;mSC=0.000;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1725,132,0:24,21:0,0:0,0:0,0:0:37.55:0;1/1:17:51.16:664,51,0:7,10:0,0:0,0:0,0:0:37.00:0	+
20_61167787_C/T	20	61167787	T	ENSG00000174407	ENST00000370523	Transcript	NON_SYNONYMOUS_CODING	242	203	68	T/M	aCg/aTg	-	ENSP=ENSP00000359554;PolyPhen=probably_damaging(0.917);HGNC=C20orf166	C	T/T,T/T	C	-	C	N/N,N/N	rs149173911	0.99	CpG	-0.159	0.000	0.005	964	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AN=4;BaseQRankSum=0.047;CAnc=C;CpG;DP=58;Dels=0.00;FS=0.000;GRP=-0.159;HRun=0;HaplotypeScore=0.9997;MQ=38.55;MQ0=0;MQRankSum=0.702;Map20=1;OAnc=C;QD=35.88;ReadPosRankSum=1.264;TS=HPOMC;TSseq=C,C,C,T,T;bSC=964;mSC=0.000;pSC=0.005	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:71.36:1396,71,0:0,0:0,1:0,0:18,19:0:38.55:0;1/1:20:60.19:792,60,0:0,0:0,0:0,0:12,8:0:37.00:0	+
20_61917425_G/A	20	61917425	A	ENSG00000101199	ENST00000370275	Transcript	NON_SYNONYMOUS_CODING	1020	928	310	G/R	Gga/Aga	-	ENSP=ENSP00000359298;PolyPhen=benign(0.001);SIFT=deleterious(0.01);HGNC=ARFGAP1	G	A/A,A/A	G	G	G	N/N,N/N	rs78818145	0.96	CpG	0.0465	0.000	0.064	934	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.05;AN=4;ASN_AF=0.02;CAnc=G;CpG;DP=68;Dels=0.00;EUR_AF=0.09;FS=0.000;GAnc=G;GRP=0.0465;HRun=0;HaplotypeScore=1.9995;MQ=37.79;MQ0=0;Map20=1;OAnc=G;QD=37.19;TS=HPGOMC;TSseq=G,G,G,G,-,-;bSC=934;mSC=0.000;pSC=0.064	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1446,111,0:21,17:0,0:0,0:0,0:0:37.79:0;1/1:30:90.29:1191,90,0:16,14:0,0:0,0:0,0:0:37.00:0	+
21_19651307_G/A	21	19651307	A	ENSG00000154646	ENST00000284885	Transcript	NON_SYNONYMOUS_CODING	2772	2738	913	A/V	gCt/gTt	-	ENSP=ENSP00000284885;PolyPhen=probably_damaging(0.995);SIFT=deleterious(0);HGNC=TMPRSS15	G	A/A,A/A	G	G	-	N/N,N/N	rs73320125	0.97	.	4.88	1.000	0.003	794	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.12;AMR_AF=0.02;AN=4;BaseQRankSum=-1.178;CAnc=G;DP=72;Dels=0.01;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=4.88;HRun;HaplotypeScore=2.9763;MQ=40.73;MQ0=0;MQRankSum=0.762;Map20=1;QD=35.19;ReadPosRankSum=-0.139;TS=HPGM;TSseq=G,G,G,G;bSC=794;mSC=1.000;pSC=0.003	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:52:99:1863,110,0:25,20:0,0:1,0:0,0:0:40.73:0;1/1:19:57.18:743,57,0:12,7:0,0:0,0:0,0:0:36.43:0	-
21_34925936_A/G	21	34925936	G	ENSG00000159140	ENST00000290239	Transcript	NON_SYNONYMOUS_CODING	4448	4399	1467	I/V	Ata/Gta	-	ENSP=ENSP00000290239;PolyPhen=benign(0.004);SIFT=tolerated(1);HGNC=SON	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	-2.31	0.102	0.282	114	1	AC=4;AF=1.00;AN=4;CAnc=A;DP=74;Dels=0.00;FS=0.000;GAnc=A;GRP=-2.31;HRun=0;HaplotypeScore=0.0000;MQ=41.16;MQ0=0;Map20=1;OAnc=A;QD=37.50;TS=HPGOMC;TSseq=A,A,A,A,A,G;bSC=114;mSC=0.102;pSC=0.282	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:47:99:1795,141,0:0,0:0,0:24,23:0,0:0:41.16:0;1/1:27:81.26:1062,81,0:0,0:0,0:15,12:0,0:0:37.00:0	+
21_46389147_C/T	21	46389147	T	ENSG00000160256	ENST00000458015	Transcript	NON_SYNONYMOUS_CODING	611	578	193	A/V	gCg/gTg	-	ENSP=ENSP00000404964;PolyPhen=unknown(0);HGNC=FAM207A	C	T/T,T/T	C	C	C	N/N,N/N	rs73906984	0.92	CpG	-3.6	0.000	0.001	976	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.08;AFR_AF=0.31;AMR_AF=0.04;AN=4;CAnc=C;CpG;DP=43;Dels=0.00;FS=0.000;GAnc=C;GRP=-3.6;HRun=0;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=C;QD=35.57;TS=HPGOMC;TSseq=C,C,C,C,T,C;bSC=976;mSC=0.000;pSC=0.001	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:30:84.26:1100,84,0:0,0:0,0:0,0:16,14:0:37.00:0;1/1:13:39.13:520,39,0:0,0:0,0:0,0:9,4:0:37.00:0	+
21_47666744_G/T	21	47666744	T	ENSG00000160294	ENST00000291688	Transcript	NON_SYNONYMOUS_CODING	4383	4347	1449	D/E	gaC/gaA	-	ENSP=ENSP00000291688;PolyPhen=benign(0.007);SIFT=tolerated(0.45);HGNC=MCM3AP	G	T/T,T/T	G	G	G	N/N,N/N	rs17183220	0.96	.	0.83	0.999	0.919	467	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.01;AMR_AF=0.05;AN=4;CAnc=G;DP=65;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=0.83;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;OAnc=G;QD=35.07;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=467;mSC=0.999;pSC=0.919	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:84.28:1120,84,0:0,0:0,0:0,0:20,11:0:37.00:0;1/1:34:99:1339,102,0:0,0:0,0:0,0:17,17:0:37.00:0	-
21_47831845_G/A	21	47831845	A	ENSG00000160299	ENST00000359568	Transcript	NON_SYNONYMOUS_CODING	5965	5858	1953	R/H	cGc/cAc	-	ENSP=ENSP00000352572;PolyPhen=benign(0.001);SIFT=tolerated(0.24);HGNC=PCNT	G	A/A,A/A	G	G	G	N/N,N/N	rs34268261	0.96	CpG	-10.6	0.000	0.015	506	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.04;AMR_AF=0.04;AN=4;BaseQRankSum=0.347;CAnc=G;CpG;DP=55;Dels=0.00;EUR_AF=0.07;FS=0.000;GAnc=G;GRP=-10.6;HRun=0;HaplotypeScore=1.9995;MQ=37.73;MQ0=0;MQRankSum=0.347;Map20=1;OAnc=G;QD=36.27;ReadPosRankSum=-0.520;TS=HPGOMC;TSseq=G,G,G,C,G,G;bSC=506;mSC=0.000;pSC=0.015	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:80.39:1520,80,0:22,18:0,0:1,0:0,0:0:37.73:0;1/1:14:42.13:551,42,0:5,9:0,0:0,0:0,0:0:37.00:0	+
21_47851636_G/A	21	47851636	A	ENSG00000160299	ENST00000359568	Transcript	NON_SYNONYMOUS_CODING	8365	8258	2753	R/H	cGc/cAc	-	ENSP=ENSP00000352572;PolyPhen=benign(0.201);SIFT=deleterious(0.01);HGNC=PCNT	G	A/A,A/A	G	G	G	N/N,N/N	rs743346	0.96	CpG	2.04	0.212	0.327	507	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.04;AFR_AF=0.03;AMR_AF=0.04;AN=4;CAnc=G;CpG;DP=51;Dels=0.00;EUR_AF=0.08;FS=0.000;GAnc=G;GRP=2.04;HRun=0;HaplotypeScore=0.9997;MQ=36.68;MQ0=0;Map20=1;OAnc=G;QD=36.33;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=507;mSC=0.212;pSC=0.327	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:32:90.30:1195,90,0:13,18:0,0:0,0:0,0:0:36.68:0;1/1:19:57.18:751,57,0:5,14:0,0:0,0:0,0:0:37.00:0	+
22_18165995_T/G	22	18165995	G	ENSG00000099968	ENST00000317582	Transcript	NON_SYNONYMOUS_CODING	484	137	46	I/R	aTa/aGa	-	ENSP=ENSP00000318883;PolyPhen=benign(0);SIFT=tolerated(0.09);HGNC=BCL2L13	T	G/G,G/G	T	T	T	N/N,N/N	rs2587070	0.91	.	-2.15	0.017	0.106	793	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.09;AFR_AF=0.03;AMR_AF=0.14;AN=4;CAnc=T;DP=86;Dels=0.00;EUR_AF=0.19;FS=0.000;GAnc=T;GRP=-2.15;HRun=0;HaplotypeScore=0.0000;MQ=39.90;MQ0=0;Map20=1;OAnc=T;QD=39.14;TS=HPGOMC;TSseq=T,T,-,A,N,C;bSC=793;mSC=0.017;pSC=0.106	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:50:99:1990,150,0:0,0:0,0:26,19:0,0:0:39.90:0;1/1:36:99:1411,108,0:0,0:0,0:17,19:0,0:0:37.00:0	+
22_19170956_C/T	22	19170956	T	ENSG00000070371	ENST00000263200	Transcript	NON_SYNONYMOUS_CODING	4847	4774	1592	V/M	Gtg/Atg	-	ENSP=ENSP00000445677;PolyPhen=benign(0.003);SIFT=tolerated(0.67);HGNC=CLTCL1	C	T/T,T/T	C	C	C	N/N,N/N	.	0.99	CpG	-6.17	0.002	0.102	753	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.01;AFR_AF=0.03;AMR_AF=0.01;AN=4;BaseQRankSum=1.636;CAnc=C;CpG;DP=63;Dels=0.00;FS=0.000;GAnc=C;GRP=-6.17;HRun=0;HaplotypeScore=0.0000;MQ=37.83;MQ0=0;MQRankSum=-1.733;Map20=1;OAnc=C;QD=36.78;ReadPosRankSum=-0.289;TS=HPGOMC;TSseq=C,C,T,C,C,T;bSC=753;mSC=0.002;pSC=0.102	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:36:76.80:1357,77,0:0,0:0,1:0,0:16,19:0:37.83:0;1/1:27:81.26:1068,81,0:0,0:0,0:0,0:11,16:0:37.00:0	-
22_19230365_T/C	22	19230365	C	ENSG00000070371	ENST00000263200	Transcript	NON_SYNONYMOUS_CODING	687	614	205	K/R	aAg/aGg	-	ENSP=ENSP00000445677;PolyPhen=benign(0.014);SIFT=tolerated(0.32);HGNC=CLTCL1	T	C/C,C/C	T	T	T	N/N,N/N	rs5746697	0.98	.	1.58	0.011	0.196	763	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;ASN_AF=0.05;CAnc=T;DP=68;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=T;GRP=1.58;HRun;HaplotypeScore=0.0000;MQ=38.55;MQ0=0;Map20=1;OAnc=T;QD=38.29;TS=HPGOMC;TSseq=T,T,T,T,T,T;bSC=763;mSC=0.011;pSC=0.196	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:38:99:1488,114,0:0,0:20,18:0,0:0,0:0:38.55:0;1/1:30:90.29:1180,90,0:0,0:19,11:0,0:0,0:0:37.00:0	-
22_19263214_G/A	22	19263214	A	ENSG00000070371	ENST00000263200	Transcript	NON_SYNONYMOUS_CODING	255	182	61	P/L	cCg/cTg	-	ENSP=ENSP00000445677;PolyPhen=possibly_damaging(0.721);SIFT=tolerated(0.2);HGNC=CLTCL1	G	A/A,A/A	G	G	G	N/N,N/N	rs3747059	0.98	CpG	1.92	0.001	0.262	759	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AMR_AF=0.01;AN=4;ASN_AF=0.05;CAnc=G;CpG;DP=88;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=G;GRP=1.92;HRun=0;HaplotypeScore=3.9049;MQ=37.92;MQ0;Map20=1;OAnc=G;QD=37.45;TS=HPGOMC;TSseq=G,G,G,G,G,A;bSC=759;mSC=0.001;pSC=0.262	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:54:99:2055,159,0:25,27:0,0:0,0:0,0:0:37.92:0;1/1:34:99:1273,99,0:17,17:0,0:0,0:0,0:0:36.15:1	-
22_24717548_A/T	22	24717548	T	ENSG00000100014	ENST00000314328	Transcript	NON_SYNONYMOUS_CODING	885	600	200	L/F	ttA/ttT	-	ENSP=ENSP00000325785;PolyPhen=benign(0.001);SIFT=tolerated(0.06);HGNC=SPECC1L	A	T/T,T/T	A	A	-	N/N,N/N	rs56112030	0.99	.	-2.28	0.951	0.876	472	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AN=4;BaseQRankSum=-1.431;CAnc=A;DP=116;Dels=0.00;EUR_AF=0.02;FS=0.000;GAnc=A;GRP=-2.28;HRun=4;HaplotypeScore=1.9995;MQ=37.71;MQ0=0;MQRankSum=0.577;Map20=1;QD=37.25;ReadPosRankSum=-0.126;TS=HPGMC;TSseq=A,A,A,A,A;bSC=472;mSC=0.951;pSC=0.876	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:70:99:2641,168,0:1,0:0,0:0,0:37,32:0:37.71:0;1/1:46:99:1809,138,0:0,0:0,0:0,0:26,20:0:37.00:0	+
22_25755885_C/T	22	25755885	T	ENSG00000100068	ENST00000402785	Transcript	NON_SYNONYMOUS_CODING	272	175	59	E/K	Gag/Aag	-	ENSP=ENSP00000384562;PolyPhen=probably_damaging(0.999);SIFT=deleterious(0);HGNC=LRP5L	C	T/T,T/T	C	C	-	N/N,N/N	rs58905020	0.95	CpG	1.88	.	.	.	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.05;AFR_AF=0.16;AMR_AF=0.02;AN=4;ASN_AF=0.03;CAnc=C;CpG;DP=63;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=1.88;HRun;HaplotypeScore=0.0000;MQ=37.00;MQ0=0;Map20=1;QD=38.51;TS=HPG;TSseq=C,C,C	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:41:99:1612,123,0:0,0:0,0:0,0:18,23:0:37.00:0;1/1:22:66.22:875,66,0:0,0:0,0:0,0:14,8:0:37.00:0	-
22_31483934_T/C	22	31483934	C	ENSG00000183963	ENST00000404496	Transcript	NON_SYNONYMOUS_CODING	1818	11	4	L/P	cTc/cCc	-	ENSP=ENSP00000385094;PolyPhen=unknown(0);HGNC=SMTN	T	C/C,C/C	T	T	C	N/N,N/N	rs11704901	0.97	.	3.83	0.064	0.105	339	1	1000gALT=C;AC=4;AF=1.00;AF1000g=0.03;AFR_AF=0.01;AMR_AF=0.03;AN=4;CAnc=T;DP=57;Dels=0.00;EUR_AF=0.05;FS=0.000;GAnc=T;GRP=3.83;HRun=2;HaplotypeScore=0.0000;MQ=37.85;MQ0=0;Map20=1;OAnc=C;QD=38.42;TS=HPGOMC;TSseq=T,T,T,C,C,C;bSC=339;mSC=0.064;pSC=0.105	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:35:99:1378,105,0:0,0:16,19:0,0:0,0:0:37.85:0;1/1:22:66.21:869,66,0:0,0:9,13:0,0:0,0:0:37.00:0	+
22_32628900_C/T	22	32628900	T	ENSG00000100191	ENST00000266086	Transcript	NON_SYNONYMOUS_CODING	1019	1007	336	R/H	cGc/cAc	-	ENSP=ENSP00000266086;PolyPhen=probably_damaging(0.999);SIFT=deleterious(0);HGNC=SLC5A4	C	T/T,T/T	C	C	C	N/N,N/N	rs62239049	0.99	CpG	4.74	0.998	.	684	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;CAnc=C;CpG;DP=71;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=4.74;HRun=0;HaplotypeScore=0.6651;MQ=37.89;MQ0=0;Map20=1;OAnc=C;QD=34.61;TS=HPGOMC;TSseq=C,C,C,C,C,C;bSC=684;mSC=0.998	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1625,126,0:0,0:0,0:0,0:19,25:0:37.89:0;1/1:25:75.24:991,75,0:0,0:0,0:0,0:9,16:0:37.00:0	-
22_32643460_C/A	22	32643460	A	ENSG00000100191	ENST00000266086	Transcript	STOP_GAINED	427	415	139	E/*	Gag/Tag	-	ENSP=ENSP00000266086;HGNC=SLC5A4	C	A/A,A/A	C	C	C	N/N,N/N	rs62239058	0.99	.	0.571	0.002	0.072	749	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.01;AMR_AF=0.01;AN=4;BaseQRankSum=-0.416;CAnc=C;DP=75;Dels=0.00;EUR_AF=0.01;FS=0.000;GAnc=C;GRP=0.571;HRun=0;HaplotypeScore=0.9997;MQ=37.56;MQ0=0;MQRankSum=1.178;Map20=1;OAnc=C;QD=34.55;ReadPosRankSum=-0.762;TS=HPGOM;TSseq=C,C,C,T,C;bSC=749;mSC=0.002;pSC=0.072	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:53:99:1864,110,0:25,27:1,0:0,0:0,0:0:37.56:0;1/1:22:63.20:816,63,0:11,11:0,0:0,0:0,0:0:36.54:0	-
22_32650200_C/T	22	32650200	T	ENSG00000100191	ENST00000266086	Transcript	NON_SYNONYMOUS_CODING,SPLICE_SITE	148	136	46	A/T	Gcg/Acg	-	ENSP=ENSP00000266086;PolyPhen=benign(0.286);SIFT=deleterious(0.02);HGNC=SLC5A4	C	T/T,T/T	C	C	C	N/N,N/N	rs2235171	0.93	.	3.19	0.054	0.076	779	1	1000gALT=T;AC=4;AF=1.00;AF1000g=0.07;AFR_AF=0.19;AMR_AF=0.04;AN=4;ASN_AF=0.04;BaseQRankSum=1.588;CAnc=C;DP=69;Dels=0.00;EUR_AF=0.04;FS=0.000;GAnc=C;GRP=3.19;HRun=0;HaplotypeScore=0.0000;MQ=37.62;MQ0=0;MQRankSum=1.444;Map20=1;OAnc=C;QD=36.84;ReadPosRankSum=1.299;TS=HPGOM;TSseq=C,C,N,C,C;bSC=779;mSC=0.054;pSC=0.076	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:48:99:1801,117,0:0,0:1,0:0,0:23,24:0:37.62:0;1/1:21:63.20:820,63,0:0,0:0,0:0,0:10,11:0:37.00:0	-
22_40161439_C/G	22	40161439	G	ENSG00000176177	ENST00000325157	Transcript	NON_SYNONYMOUS_CODING	1259	1008	336	W/C	tgG/tgC	-	ENSP=ENSP00000317431;PolyPhen=benign(0.012);SIFT=deleterious(0);HGNC=ENTHD1	C	G/G,G/G	C	C	C	N/N,N/N	rs112903488	1.0	.	4.87	0.089	0.576	629	1	1000gALT=G;AC=4;AF=1.00;AF1000g=0.00;AN=4;CAnc=C;DP=76;Dels=0.00;FS=0.000;GAnc=C;GRP=4.87;HRun=0;HaplotypeScore=0.9997;MQ=37.65;MQ0=0;Map20=1;OAnc=C;QD=38.40;TS=HPGOMC;TSseq=C,C,C,C,C,C;UR;bSC=629;mSC=0.089;pSC=0.576	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1799,138,0:0,0:0,0:22,24:0,0:0:37.65:0;1/1:30:90.29:1183,90,0:0,0:0,0:14,16:0,0:0:37.00:0	-
22_40749409_G/T	22	40749409	T	ENSG00000239900	ENST00000425605	Transcript	NON_SYNONYMOUS_CODING	461	430	144	V/F	Gtc/Ttc	-	ENSP=ENSP00000389521;PolyPhen=unknown(0);SIFT=deleterious(0.02);HGNC=ADSL	G	T/T,T/T	G	G	G	N/N,N/N	.	1	RM	0.235	.	0.111	245	0	AC=4;AF=1.00;AN=4;CAnc=G;DP=78;Dels=0.00;FS=0.000;GAnc=G;GRP=0.235;HRun;HaplotypeScore=0.9958;MQ=36.82;MQ0=0;Map20=0;OAnc=G;QD=37.03;RM;TS=HPGOMC;TSseq=G,G,-,G,G,G;UR;bSC=245;pSC=0.111	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:46:99:1736,135,0:0,0:0,0:0,0:20,26:0:36.82:0;1/1:32:96.30:1249,96,0:0,0:0,0:0,0:20,12:0:37.00:0	+
22_45126695_T/A	22	45126695	A	ENSG00000186654	ENST00000455389	Transcript	NON_SYNONYMOUS_CODING	12	13	5	S/T	Tct/Act	-	ENSP=ENSP00000405404;PolyPhen=unknown(0);HGNC=PRR5	T	A/A,A/A	T	T	T	N/N,N/N	rs73418216	0.98	.	0.623	.	0.090	964	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.02;AFR_AF=0.09;AMR_AF=0.01;AN=4;CAnc=T;DP=51;Dels=0.00;FS=0.000;GAnc=T;GRP=0.623;HRun=0;HaplotypeScore=1.9995;MQ=37.51;MQ0=0;Map20=1;OAnc=T;QD=36.96;TS=HPGOM;TSseq=T,T,T,T,T;bSC=964;pSC=0.090	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:39:99:1475,111,0:13,26:0,0:0,0:0,0:0:37.51:0;1/1:12:36.11:460,36,0:4,8:0,0:0,0:0,0:0:37.00:0	+
22_45723822_A/G	22	45723822	G	ENSG00000100376	ENST00000216214	Transcript	NON_SYNONYMOUS_CODING	1234	400	134	I/V	Atc/Gtc	-	ENSP=ENSP00000216214;PolyPhen=benign(0.002);SIFT=tolerated(0.62);HGNC=FAM118A	A	G/G,G/G	A	A	A	N/N,N/N	.	1	.	2.94	0.039	0.926	683	1	AC=4;AF=1.00;AN=4;BaseQRankSum=0.615;CAnc=A;DP=47;Dels=0.00;FS=5.371;GAnc=A;GRP=2.94;HRun;HaplotypeScore=1.9981;MQ=38.90;MQ0=0;MQRankSum=-1.062;Map20=1;OAnc=A;QD=35.54;ReadPosRankSum=-1.062;TS=HPGOMC;TSseq=A,A,A,A,A,A;bSC=683;mSC=0.039;pSC=0.926	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:31:53.29:1135,53,0:1,0:0,0:8,22:0,0:0:38.90:0;1/1:16:48.16:640,48,0:0,0:0,0:12,4:0,0:0:37.00:0	+
22_46644177_G/A	22	46644177	A	ENSG00000205643	ENST00000314567	Transcript	NON_SYNONYMOUS_CODING	429	5	2	A/V	gCg/gTg	-	ENSP=ENSP00000325301;PolyPhen=benign(0.05);SIFT=tolerated(0.08);HGNC=C22orf40	G	A/A,A/A	G	G	G	N/N,N/N	rs61748935	0.94	CpG	3.35	0.625	0.662	641	1	1000gALT=A;AC=4;AF=1.00;AF1000g=0.06;AFR_AF=0.20;AMR_AF=0.05;AN=4;CAnc=G;CpG;DP=78;Dels=0.00;EUR_AF=0.03;FS=0.000;GAnc=G;GRP=3.35;HRun=0;HaplotypeScore=0.9734;MQ=38.57;MQ0;Map20=1;OAnc=G;QD=35.68;TS=HPGOMC;TSseq=G,G,G,G,G,G;bSC=641;mSC=0.625;pSC=0.662	GT:DP:GQ:PL:A:C:G:T:IR:MQ:MQ0	1/1:45:99:1639,126,0:20,25:0,0:0,0:0,0:0:38.57:1;1/1:33:99:1280,99,0:16,17:0,0:0,0:0,0:0:36.65:0	-