Index of /kundaje/marinovg/oak/AncientHumans/2023-09-25-clustering
Name
Last modified
Size
Description
Parent Directory
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Aman-clusters/
2023-10-31 05:21
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haplotype_effects-max0.7.png
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haplotype_effects-max1.png
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haplotype_effects.5000bp_ext.files
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haplotype_effects.5000bp_ext.max
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haplotype_effects.5000bp_ext.max.0.6
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist-genes
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.CRE-hist
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.CRE-hist.hist
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.hist
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.neg
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.neg-genes
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos-genes
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haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos-neg-both
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haplotype_effects.5000bp_ext.max.0.6.1kb.bed
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haplotype_effects.5000bp_ext.max.0.6.1kb.bigBed
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haplotype_effects.5000bp_ext.max.0.6.chr-hist
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haplotype_effects.5000bp_ext.max.0.6.chr-hist.log2FC_per_chr_size
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haplotype_effects.5000bp_ext.max.0.6.chr-hist.log2FC_per_variants
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist-genes
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.CRE-hist
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.CRE-hist.hist
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.hist
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.neg
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.neg-genes
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos-genes
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haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos-neg-both
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haplotype_effects.5000bp_ext.max.0.718.1kb.bed
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haplotype_effects.5000bp_ext.max.500bp.bed
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haplotype_effects.5000bp_ext.max.cdf
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haplotype_effects.5000bp_ext.max.conf
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haplotype_effects.5000bp_ext.max.png
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haplotype_effects.5000bp_ext.max1.500bp-vs-hg19.refFlat-2012-10-22.nearestTSS
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haplotype_effects.5000bp_ext.max1.500bp.bed
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haplotype_effects.5000bp_ext.max1.500bp.bigBed
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haplotype_effects.5000bp_ext.max_both.conf
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haplotype_effects.5000bp_ext.max_both.png
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haplotype_effects.Euclidean_genes.atr
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haplotype_effects.Euclidean_genes.cdt
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haplotype_effects.Euclidean_genes.gtr
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haplotype_effects.Euclidean_genes.jtv
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haplotype_effects.Euclidean_genes.min_0.718.atr
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haplotype_effects.Euclidean_genes.min_0.718.cdt
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haplotype_effects.Euclidean_genes.min_0.718.gtr
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haplotype_effects.Euclidean_genes.min_0.718.jtv
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haplotype_effects.Euclidean_genes.min_0.718.png
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haplotype_effects.Euclidean_genes.min_0.718_all-shown-GOBiologicalProcess.tsv
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haplotype_effects.Euclidean_genes.min_0.718_all-shown-GOMolecularFunction.tsv
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haplotype_effects.Euclidean_genes.min_0.718_all-shown-HumanPhenotypeOntology.tsv
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haplotype_effects.Euclidean_genes.min_0.718_all-shown-MGIPhenoSingleKO.tsv
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haplotype_effects.Euclidean_genes.min_0.718_all-shown-MGIPhenotype.tsv
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haplotype_effects.Euclidean_genes.min_0.718_all.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list1.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list1.txt
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haplotype_effects.Euclidean_genes.min_0.718_list2.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list2.txt
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haplotype_effects.Euclidean_genes.min_0.718_list3.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list3.txt
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haplotype_effects.Euclidean_genes.min_0.718_list4.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list4.txt
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haplotype_effects.Euclidean_genes.min_0.718_list5-shown-GOBiologicalProcess.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list5-shown-GOMolecularFunction.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list5-shown-HumanPhenotypeOntology.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list5-shown-MGIPhenoSingleKO.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list5-shown-MGIPhenotype.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list5.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list5.txt
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haplotype_effects.Euclidean_genes.min_0.718_list6-shown-GOBiologicalProcess.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list6-shown-HumanPhenotypeOntology.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list6-shown-MGIPhenoSingleKO.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list6-shown-MGIPhenotype.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list6.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list6.txt
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haplotype_effects.Euclidean_genes.min_0.718_list7-shown-HumanPhenotypeOntology.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list7-shown-MGIPhenoSingleKO.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list7-shown-MGIPhenotype.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list7.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list7.txt
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haplotype_effects.Euclidean_genes.min_0.718_list8.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list8.txt
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haplotype_effects.Euclidean_genes.min_0.718_list9.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list9.txt
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haplotype_effects.Euclidean_genes.min_0.718_list10.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list10.txt
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haplotype_effects.Euclidean_genes.min_0.718_list11.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list11.txt
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haplotype_effects.Euclidean_genes.min_0.718_list12-shown-GOCellularComponent.tsv
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haplotype_effects.Euclidean_genes.min_0.718_list12.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list12.txt
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haplotype_effects.Euclidean_genes.min_0.718_list13.500bp.bed
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haplotype_effects.Euclidean_genes.min_0.718_list13.txt
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haplotype_effects.Euclidean_genes.scale0.6.png
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haplotype_effects.Euclidean_genes.scale1.png
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haplotype_effects.atr
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haplotype_effects.cdt.gz
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haplotype_effects.cdt.variants-only
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haplotype_effects.cdt.variants-only.500bp-background_archaic-shown-EnsemblGenes.tsv
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haplotype_effects.cdt.variants-only.500bp-background_archaic-shown-GOBiologicalProcess.tsv
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haplotype_effects.cdt.variants-only.500bp-background_archaic-shown-GOCellularComponent.tsv
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haplotype_effects.cdt.variants-only.500bp-background_archaic-shown-GOMolecularFunction.tsv
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haplotype_effects.cdt.variants-only.500bp-background_archaic-shown-HumanPhenotypeOntology.tsv
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haplotype_effects.cdt.variants-only.500bp-background_archaic-shown-MGIPhenoSingleKO.tsv
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haplotype_effects.cdt.variants-only.500bp-background_archaic-shown-MGIPhenotype.tsv
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haplotype_effects.cdt.variants-only.500bp.bed
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haplotype_effects.gtr
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haplotype_effects.jtv
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haplotype_effects.min_0.718.atr
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haplotype_effects.min_0.718.cdt
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haplotype_effects.min_0.718.gtr
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haplotype_effects.min_0.718.jtv
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haplotype_effects.min_0.718.tsv
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haplotype_effects.png
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haplotype_effects.tsv
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haplotype_effects_list1-shown-GOBiologicalProcess.tsv
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haplotype_effects_list1-shown-MGIPhenoSingleKO.tsv
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haplotype_effects_list2-shown-GOBiologicalProcess.tsv
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haplotype_effects_list2-shown-GOCellularComponent.tsv
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haplotype_effects_list2-shown-GOMolecularFunction.tsv
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haplotype_effects_list2-shown-HumanPhenotypeOntology.tsv
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haplotype_effects_list2.txt
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haplotype_effects_list3-shown-MGIPhenoSingleKO.tsv
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haplotype_effects_list3.txt
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haplotype_effects_list4-shown-GOBiologicalProcess.tsv
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haplotype_effects_list4-shown-HumanPhenotypeOntology.tsv
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haplotype_effects_list4-shown-MGIPhenoSingleKO.tsv
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haplotype_effects_list8-shown-GOMolecularFunction.tsv
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haplotype_effects_list8-shown-HumanPhenotypeOntology.tsv
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haplotype_effects_list9-shown-GOBiologicalProcess.tsv
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haplotype_effects_list10-shown-GOBiologicalProcess.tsv
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haplotype_effects_list14-shown-HumanPhenotypeOntology.tsv
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haplotype_effects_list15-shown-GOBiologicalProcess.tsv
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haplotype_effects_list16-shown-MGIPhenoSingleKO.tsv
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hg19.ideogram.conf
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