Index of /kundaje/marinovg/oak/AncientHumans/2023-09-25-clustering

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[PARENTDIR]Parent Directory  -  
[DIR]Aman-clusters/2023-10-31 05:21 -  
[IMG]haplotype_effects-max0.7.png2023-10-26 20:45 5.6M 
[IMG]haplotype_effects-max1.png2023-10-26 20:44 5.0M 
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[   ]haplotype_effects.5000bp_ext.max2023-09-28 03:24 1.3M 
[   ]haplotype_effects.5000bp_ext.max.0.62023-09-28 03:33 258K 
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS2023-10-16 15:34 511K 
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist2023-10-23 12:18 100K 
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist-genes2023-10-23 12:28 19K 
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.CRE-hist2023-10-23 12:19 25K 
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.CRE-hist.hist2023-10-23 12:19 110  
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.hist2023-10-23 12:19 41  
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.neg2023-10-23 12:23 51K 
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[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos2023-10-23 12:23 49K 
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[   ]haplotype_effects.5000bp_ext.max.0.6.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos-neg-both2023-10-23 12:24 5.1K 
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb.bed2023-10-16 15:19 204K 
[   ]haplotype_effects.5000bp_ext.max.0.6.1kb.bigBed2023-10-16 15:19 178K 
[   ]haplotype_effects.5000bp_ext.max.0.6.chr-hist2023-09-28 03:33 218  
[   ]haplotype_effects.5000bp_ext.max.0.6.chr-hist.log2FC_per_chr_size2023-09-28 03:34 685  
[   ]haplotype_effects.5000bp_ext.max.0.6.chr-hist.log2FC_per_variants2023-10-27 23:12 679  
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS2023-10-23 16:11 354K 
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist2023-10-23 16:11 68K 
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist-genes2023-10-23 16:12 15K 
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[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.CRE-hist.hist2023-10-23 16:11 77  
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.hist2023-10-23 16:11 40  
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.neg2023-10-23 16:18 31K 
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.neg-genes2023-10-23 16:19 9.2K 
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos2023-10-23 16:18 30K 
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos-genes2023-10-23 16:19 9.2K 
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb-vs-hg19.refFlat-2012-10-22.nearestTSS.gene-variant-hist.pos-neg-both2023-10-23 16:19 3.2K 
[   ]haplotype_effects.5000bp_ext.max.0.718.1kb.bed2023-10-23 16:10 141K 
[   ]haplotype_effects.5000bp_ext.max.500bp.bed2023-10-16 22:33 1.3M 
[   ]haplotype_effects.5000bp_ext.max.cdf2023-10-02 19:39 952K 
[   ]haplotype_effects.5000bp_ext.max.conf2023-10-27 23:08 1.1K 
[IMG]haplotype_effects.5000bp_ext.max.png2023-09-28 03:38 2.6M 
[   ]haplotype_effects.5000bp_ext.max1.500bp-vs-hg19.refFlat-2012-10-22.nearestTSS2023-10-16 22:36 147K 
[   ]haplotype_effects.5000bp_ext.max1.500bp.bed2023-10-16 22:37 58K 
[   ]haplotype_effects.5000bp_ext.max1.500bp.bigBed2023-10-16 22:37 74K 
[   ]haplotype_effects.5000bp_ext.max_both.conf2023-10-27 23:09 1.3K 
[IMG]haplotype_effects.5000bp_ext.max_both.png2023-10-27 23:13 2.7M 
[   ]haplotype_effects.Euclidean_genes.atr2023-10-31 07:50 38K 
[IMG]haplotype_effects.Euclidean_genes.cdt2023-10-31 07:50 412M 
[   ]haplotype_effects.Euclidean_genes.gtr2023-10-31 07:39 1.6M 
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[TXT]haplotype_effects.Euclidean_genes.min_0.718_all-shown-GOBiologicalProcess.tsv2023-10-31 18:17 1.6K 
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[TXT]haplotype_effects.Euclidean_genes.min_0.718_all-shown-HumanPhenotypeOntology.tsv2023-10-31 18:18 1.4K 
[TXT]haplotype_effects.Euclidean_genes.min_0.718_all-shown-MGIPhenoSingleKO.tsv2023-10-31 18:18 2.3K 
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[   ]haplotype_effects.Euclidean_genes.min_0.718_all.500bp.bed2023-10-31 18:15 103K 
[   ]haplotype_effects.Euclidean_genes.min_0.718_list1.500bp.bed2023-10-31 17:22 110  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list1.txt2023-10-31 17:18 110  
[   ]haplotype_effects.Euclidean_genes.min_0.718_list2.500bp.bed2023-10-31 17:22 372  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list2.txt2023-10-31 17:18 372  
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[TXT]haplotype_effects.Euclidean_genes.min_0.718_list3.txt2023-10-31 17:18 2.9K 
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[TXT]haplotype_effects.Euclidean_genes.min_0.718_list5-shown-GOBiologicalProcess.tsv2023-10-31 17:28 1.2K 
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[TXT]haplotype_effects.Euclidean_genes.min_0.718_list5-shown-HumanPhenotypeOntology.tsv2023-10-31 17:28 2.3K 
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list5-shown-MGIPhenoSingleKO.tsv2023-10-31 17:28 2.3K 
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[TXT]haplotype_effects.Euclidean_genes.min_0.718_list5.txt2023-10-31 17:18 70K 
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list6-shown-GOBiologicalProcess.tsv2023-10-31 17:30 594  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list6-shown-HumanPhenotypeOntology.tsv2023-10-31 17:30 606  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list6-shown-MGIPhenoSingleKO.tsv2023-10-31 17:30 589  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list6-shown-MGIPhenotype.tsv2023-10-31 17:30 720  
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[TXT]haplotype_effects.Euclidean_genes.min_0.718_list6.txt2023-10-31 17:18 11K 
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[   ]haplotype_effects.Euclidean_genes.min_0.718_list8.500bp.bed2023-10-31 17:22 3.3K 
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[   ]haplotype_effects.Euclidean_genes.min_0.718_list9.500bp.bed2023-10-31 17:22 331  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list9.txt2023-10-31 17:18 331  
[   ]haplotype_effects.Euclidean_genes.min_0.718_list10.500bp.bed2023-10-31 17:22 532  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list10.txt2023-10-31 17:18 532  
[   ]haplotype_effects.Euclidean_genes.min_0.718_list11.500bp.bed2023-10-31 17:22 264  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list11.txt2023-10-31 17:18 264  
[TXT]haplotype_effects.Euclidean_genes.min_0.718_list12-shown-GOCellularComponent.tsv2023-10-31 17:35 577  
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[IMG]haplotype_effects.cdt.variants-only2023-09-28 03:29 968K 
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[TXT]haplotype_effects.cdt.variants-only.500bp-background_archaic-shown-MGIPhenoSingleKO.tsv2023-10-31 18:49 2.4K 
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[TXT]haplotype_effects.min_0.718.tsv2023-10-26 22:30 73M 
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[TXT]haplotype_effects.tsv2023-09-26 02:26 650M 
[TXT]haplotype_effects_list1-shown-GOBiologicalProcess.tsv2023-10-26 19:10 579  
[TXT]haplotype_effects_list1-shown-HumanPhenotypeOntology.tsv2023-10-26 19:10 1.6K 
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[TXT]haplotype_effects_list1.txt2023-10-26 19:06 14K 
[TXT]haplotype_effects_list2-shown-GOBiologicalProcess.tsv2023-10-26 19:12 1.6K 
[TXT]haplotype_effects_list2-shown-GOCellularComponent.tsv2023-10-26 19:12 717  
[TXT]haplotype_effects_list2-shown-GOMolecularFunction.tsv2023-10-26 19:12 892  
[TXT]haplotype_effects_list2-shown-HumanPhenotypeOntology.tsv2023-10-26 19:13 1.5K 
[TXT]haplotype_effects_list2-shown-MGIPhenoSingleKO.tsv2023-10-26 19:13 1.9K 
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[TXT]haplotype_effects_list2.txt2023-10-26 19:07 118K 
[TXT]haplotype_effects_list3-shown-MGIPhenoSingleKO.tsv2023-10-26 19:16 597  
[TXT]haplotype_effects_list3-shown-MGIPhenotype.tsv2023-10-26 19:16 725  
[TXT]haplotype_effects_list3.txt2023-10-26 18:59 8.2K 
[TXT]haplotype_effects_list4-shown-GOBiologicalProcess.tsv2023-10-26 19:20 1.6K 
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[TXT]haplotype_effects_list4-shown-MGIPhenoSingleKO.tsv2023-10-26 19:21 3.3K 
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[TXT]haplotype_effects_list4.txt2023-10-26 19:07 54K 
[TXT]haplotype_effects_list5.txt2023-10-26 19:07 6.2K 
[TXT]haplotype_effects_list6-shown-GOBiologicalProcess.tsv2023-10-26 19:25 777  
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[TXT]haplotype_effects_list6.txt2023-10-26 19:07 12K 
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[TXT]haplotype_effects_list8-shown-GOBiologicalProcess.tsv2023-10-26 19:29 730  
[TXT]haplotype_effects_list8-shown-GOCellularComponent.tsv2023-10-26 19:27 588  
[TXT]haplotype_effects_list8-shown-GOMolecularFunction.tsv2023-10-26 19:29 832  
[TXT]haplotype_effects_list8-shown-HumanPhenotypeOntology.tsv2023-10-26 19:29 3.1K 
[TXT]haplotype_effects_list8-shown-MGIPhenoSingleKO.tsv2023-10-26 19:30 886  
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[TXT]haplotype_effects_list9-shown-GOBiologicalProcess.tsv2023-10-26 19:31 1.9K 
[TXT]haplotype_effects_list9-shown-GOCellularComponent.tsv2023-10-26 19:30 881  
[TXT]haplotype_effects_list9-shown-GOMolecularFunction.tsv2023-10-26 19:31 739  
[TXT]haplotype_effects_list9-shown-HumanPhenotypeOntology.tsv2023-10-26 19:31 1.4K 
[TXT]haplotype_effects_list9-shown-MGIPhenoSingleKO.tsv2023-10-26 19:31 1.9K 
[TXT]haplotype_effects_list9-shown-MGIPhenotype.tsv2023-10-26 19:31 2.0K 
[TXT]haplotype_effects_list9.txt2023-10-26 19:07 168K 
[TXT]haplotype_effects_list10-shown-GOBiologicalProcess.tsv2023-10-26 19:32 1.8K 
[TXT]haplotype_effects_list10-shown-HumanPhenotypeOntology.tsv2023-10-26 19:33 1.6K 
[TXT]haplotype_effects_list10-shown-MGIPhenoSingleKO.tsv2023-10-26 19:33 1.4K 
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[TXT]haplotype_effects_list11-shown-MGIPhenoSingleKO.tsv2023-10-26 19:34 611  
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[TXT]haplotype_effects_list13-shown-GOCellularComponent.tsv2023-10-26 19:36 577  
[TXT]haplotype_effects_list13-shown-MGIPhenoSingleKO.tsv2023-10-26 19:36 747  
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[TXT]haplotype_effects_list14-shown-GOMolecularFunction.tsv2023-10-26 19:37 731  
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[TXT]haplotype_effects_list14-shown-MGIPhenoSingleKO.tsv2023-10-26 19:38 1.9K 
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[TXT]haplotype_effects_list16-shown-GOCellularComponent.tsv2023-10-26 19:40 723  
[TXT]haplotype_effects_list16-shown-GOMolecularFunction.tsv2023-10-26 19:40 859  
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[   ]hg19.bands.conf2023-09-28 03:25 138  
[   ]hg19.ideogram.conf2023-09-28 03:25 464  
[   ]hg19.ideogram.label.conf2023-09-28 03:25 221  
[   ]hg19.ideogram.position.conf2023-09-28 03:25 141  
[   ]hg19.ticks.conf2023-09-28 03:25 623  
[TXT]karyotype.human.hg38-chr.txt2023-09-28 03:25 40K 
[   ]z2023-10-31 04:08 268  
[   ]zCLa.1.err2023-10-31 04:13 0  
[   ]zCLa.1.out2023-10-31 04:13 0  
[   ]zCLa.1.sbatch2023-10-31 04:08 340  
[   ]zCLa.2.err2023-10-31 04:13 0  
[   ]zCLa.2.out2023-10-31 04:13 0  
[   ]zCLa.2.sbatch2023-10-31 04:08 350  

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