File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/a10a7070-199d-46a9-86eb-c50f7d7322b1/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c4a44d6b-9471-4ee2-9b0e-6cdd4e5fc01e/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF519ZJI.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF519ZJI.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF519ZJI.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF519ZJI.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF519ZJI.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF977ONA.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF977ONA.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF977ONA.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF977ONA.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF977ONA.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF519ZJI.crop_101-2bp.nodup.pr1_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF519ZJI.crop_101-2bp.nodup.pr1_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF519ZJI.crop_101-2bp.nodup.pr1_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF519ZJI.crop_101-2bp.nodup.pr1_x_ctl.pooled.355M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF519ZJI.crop_101-2bp.nodup.pr2_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF519ZJI.crop_101-2bp.nodup.pr2_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF519ZJI.crop_101-2bp.nodup.pr2_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF519ZJI.crop_101-2bp.nodup.pr2_x_ctl.pooled.355M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF519ZJI.crop_101-2bp.nodup_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF519ZJI.crop_101-2bp.nodup_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF519ZJI.crop_101-2bp.nodup_x_ctl.pooled.355M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF519ZJI.crop_101-2bp.nodup_x_ctl.pooled.355M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF977ONA.crop_101-2bp.nodup.pr1_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF977ONA.crop_101-2bp.nodup.pr1_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF977ONA.crop_101-2bp.nodup.pr1_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF977ONA.crop_101-2bp.nodup.pr1_x_ctl.pooled.338M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF977ONA.crop_101-2bp.nodup.pr2_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF977ONA.crop_101-2bp.nodup.pr2_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF977ONA.crop_101-2bp.nodup.pr2_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF977ONA.crop_101-2bp.nodup.pr2_x_ctl.pooled.338M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF977ONA.crop_101-2bp.nodup_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF977ONA.crop_101-2bp.nodup_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF977ONA.crop_101-2bp.nodup_x_ctl.pooled.338M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF977ONA.crop_101-2bp.nodup_x_ctl.pooled.338M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF519ZJI.crop_101-2bp.nodup.pr1_x_ctl.pooled.355M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF519ZJI.crop_101-2bp.nodup.pr2_x_ctl.pooled.355M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF519ZJI.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF519ZJI.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF519ZJI.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF519ZJI.crop_101-2bp.nodup_x_ctl.pooled.355M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF519ZJI.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF519ZJI.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF519ZJI.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF977ONA.crop_101-2bp.nodup.pr1_x_ctl.pooled.338M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF977ONA.crop_101-2bp.nodup.pr2_x_ctl.pooled.338M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF977ONA.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF977ONA.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF977ONA.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF977ONA.crop_101-2bp.nodup_x_ctl.pooled.338M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF977ONA.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF977ONA.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF977ONA.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/575aa141-6ddc-4dfd-a4d7-8d3c097accbb/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF519ZJI.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF519ZJI.crop_101-2bp.nodup_x_ctl.pooled.355M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF519ZJI.crop_101-2bp.nodup_x_ctl.pooled.355M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF977ONA.crop_101-2bp.nodup_x_ctl.pooled.338M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/9528aecb-ef19-4020-856a-05e31b22c776/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF977ONA.crop_101-2bp.nodup_x_ctl.pooled.338M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -7711281365253303913 chip.macs2_signal_track_pooled -1887118641630309468 BW FC -7711281365253303913->-1887118641630309468 7542688073991145233 BW p-val -7711281365253303913->7542688073991145233 6340452493093464561 chip.call_peak_pooled -2296812757839453381 Peak (bfilt) 6340452493093464561->-2296812757839453381 -7702593756022989540 Peak 6340452493093464561->-7702593756022989540 -3623242836192048267 chip.idr_ppr -7702593756022989540->-3623242836192048267 1390253876014730289 chip.idr -7702593756022989540->1390253876014730289 -3592719298807931556 chip.overlap -7702593756022989540->-3592719298807931556 -2068373541743366070 chip.overlap_ppr -7702593756022989540->-2068373541743366070 5131002487884230991 chip.pool_ta -1471718086652625066 TAG-ALIGN 5131002487884230991->-1471718086652625066 -1471718086652625066->-7711281365253303913 -1471718086652625066->6340452493093464561 -1471718086652625066->-3623242836192048267 -1471718086652625066->1390253876014730289 -1471718086652625066->-3592719298807931556 -1471718086652625066->-2068373541743366070 -202947325751986007 chip.call_peak -3894231516606544228 Peak (bfilt) -202947325751986007->-3894231516606544228 -5669851467754974126 Peak -202947325751986007->-5669851467754974126 -5669851467754974126->1390253876014730289 -5669851467754974126->-3592719298807931556 3026084216196663360 chip.reproducibility_overlap -5669851467754974126->3026084216196663360 -2171867959269175323 chip.reproducibility_idr -5669851467754974126->-2171867959269175323 -2045672507357356551 chip.bam2ta 3228418027708646217 TAG-ALIGN -2045672507357356551->3228418027708646217 3228418027708646217->5131002487884230991 3228418027708646217->-202947325751986007 -4270427534908707213 chip.macs2_signal_track 3228418027708646217->-4270427534908707213 3228418027708646217->-3623242836192048267 3228418027708646217->3026084216196663360 3228418027708646217->-2171867959269175323 3228418027708646217->-2068373541743366070 -5378001691263939348 chip.filter 3025841637375445878 SAMstats QC -5378001691263939348->3025841637375445878 -5038656999905351449 Filt/deduped BAM -5378001691263939348->-5038656999905351449 5586868995482447152 LibCmplx QC -5378001691263939348->5586868995482447152 -5038656999905351449->-2045672507357356551 -8750790639115290291 chip.jsd -5038656999905351449->-8750790639115290291 -4048353532837417167 chip.align -7756296759219360951 SAMstats QC -4048353532837417167->-7756296759219360951 2549337413723021264 BAM -4048353532837417167->2549337413723021264 2549337413723021264->-5378001691263939348 -8841611786444453814 chip.xcor 5399233715350171534 XCOR Plot -8841611786444453814->5399233715350171534 -4965203997492298510 BW FC -4270427534908707213->-4965203997492298510 276035540033588979 BW p-val -4270427534908707213->276035540033588979 -326841457951315664 FASTQ R1 (1) -326841457951315664->-4048353532837417167 -326841457951315664->-8841611786444453814 -1783848067628306299 FASTQ R2 (1) -1783848067628306299->-4048353532837417167 5477447287867640887 chip.call_peak 4617580966750284412 Peak (bfilt) 5477447287867640887->4617580966750284412 -6033833814057546543 Peak 5477447287867640887->-6033833814057546543 -6033833814057546543->1390253876014730289 -6033833814057546543->-3592719298807931556 -6033833814057546543->3026084216196663360 -6033833814057546543->-2171867959269175323 -7750688299374402323 chip.bam2ta 8057734466892579593 TAG-ALIGN -7750688299374402323->8057734466892579593 8057734466892579593->5131002487884230991 8057734466892579593->5477447287867640887 3469853607242463965 chip.macs2_signal_track 8057734466892579593->3469853607242463965 8057734466892579593->-3623242836192048267 8057734466892579593->3026084216196663360 8057734466892579593->-2171867959269175323 8057734466892579593->-2068373541743366070 7896095085343672718 chip.filter 4507202538010237134 SAMstats QC 7896095085343672718->4507202538010237134 8788634808362031800 Filt/deduped BAM 7896095085343672718->8788634808362031800 2483990241143758979 LibCmplx QC 7896095085343672718->2483990241143758979 8788634808362031800->-7750688299374402323 8788634808362031800->-8750790639115290291 8689455924876632678 chip.align -4125103331130590690 SAMstats QC 8689455924876632678->-4125103331130590690 -5068653937331096754 BAM 8689455924876632678->-5068653937331096754 -5068653937331096754->7896095085343672718 -6727446727349037381 chip.xcor -7667908975862594676 XCOR Plot -6727446727349037381->-7667908975862594676 4212758458908333884 BW FC 3469853607242463965->4212758458908333884 6594881141548896358 BW p-val 3469853607242463965->6594881141548896358 564968652765823914 FASTQ R1 (1) 564968652765823914->8689455924876632678 564968652765823914->-6727446727349037381 -4357014962316262061 FASTQ R2 (1) -4357014962316262061->8689455924876632678 7513943840947439782 chip.pool_ta_ctl 2426394716943469363 TAG-ALIGN 7513943840947439782->2426394716943469363 2426394716943469363->-7711281365253303913 2426394716943469363->6340452493093464561 2426394716943469363->-202947325751986007 2426394716943469363->-4270427534908707213 2426394716943469363->5477447287867640887 2426394716943469363->3469853607242463965 2426394716943469363->-3623242836192048267 2426394716943469363->3026084216196663360 2426394716943469363->-2171867959269175323 2426394716943469363->-2068373541743366070 5855835186849556780 chip.bam2ta_ctl -3945083866368878140 TAG-ALIGN 5855835186849556780->-3945083866368878140 -3945083866368878140->7513943840947439782 -3168299871829375211 Filt/deduped BAM -3168299871829375211->5855835186849556780 -3168299871829375211->-8750790639115290291 -5663324303374525036 chip.bam2ta_ctl -1693267364073472541 TAG-ALIGN -5663324303374525036->-1693267364073472541 -1693267364073472541->7513943840947439782 -8221278961863649857 Filt/deduped BAM -8221278961863649857->-5663324303374525036 -8221278961863649857->-8750790639115290291 -2263164586959507614 chip.bam2ta_ctl -4142995469591456527 TAG-ALIGN -2263164586959507614->-4142995469591456527 -4142995469591456527->7513943840947439782 7170198862586374986 Filt/deduped BAM 7170198862586374986->-2263164586959507614 7170198862586374986->-8750790639115290291 5257671130734140899 chip.bam2ta_ctl -8817016511640692728 TAG-ALIGN 5257671130734140899->-8817016511640692728 -8817016511640692728->7513943840947439782 7523168749456189907 Filt/deduped BAM 7523168749456189907->5257671130734140899 7523168749456189907->-8750790639115290291 -228605303411624891 chip.bam2ta_ctl -2419456318362666743 TAG-ALIGN -228605303411624891->-2419456318362666743 -2419456318362666743->7513943840947439782 2989498453912303183 Filt/deduped BAM 2989498453912303183->-228605303411624891 2989498453912303183->-8750790639115290291 5030390638687248798 chip.bam2ta_ctl -6070836930520894925 TAG-ALIGN 5030390638687248798->-6070836930520894925 -6070836930520894925->7513943840947439782 -7915058433092206331 Filt/deduped BAM -7915058433092206331->5030390638687248798 -7915058433092206331->-8750790639115290291 -6400431251844567125 IDR Plot ppr -3623242836192048267->-6400431251844567125 882302653616740264 IDR Peak ppr -3623242836192048267->882302653616740264 882302653616740264->-2171867959269175323 4061110960111199298 IDR Plot rep1_vs_rep2 1390253876014730289->4061110960111199298 -8554393201333167128 IDR NPeak rep1_vs_rep2 1390253876014730289->-8554393201333167128 -8554393201333167128->-2171867959269175323 -3055058447103168507 Overlap Peak rep1_vs_rep2 -3592719298807931556->-3055058447103168507 -3055058447103168507->3026084216196663360 5133451546498375626 Overlap Peak optimal 3026084216196663360->5133451546498375626 -2793180142563224907 Overlap reproducibility 3026084216196663360->-2793180142563224907 -1569761866994077639 IDR Peak optimal -2171867959269175323->-1569761866994077639 -7448310092290521776 IDR reproducibility -2171867959269175323->-7448310092290521776 6735730416506697428 Overlap Peak ppr -2068373541743366070->6735730416506697428 6735730416506697428->3026084216196663360 2195393990457593609 JSD Plot -8750790639115290291->2195393990457593609

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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