File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF551AQH.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF551AQH.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF551AQH.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF551AQH.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF551AQH.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF750PYC.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF750PYC.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF750PYC.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF750PYC.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF750PYC.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF551AQH.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF551AQH.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF551AQH.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF551AQH.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF551AQH.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF551AQH.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF750PYC.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF750PYC.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF750PYC.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF750PYC.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF750PYC.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF750PYC.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF551AQH.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -1439842315078228590 chip.macs2_signal_track_pooled -8013573610546740493 BW FC -1439842315078228590->-8013573610546740493 2848929517764752765 BW p-val -1439842315078228590->2848929517764752765 -1703769973488018246 chip.call_peak_pooled 6390809394260911759 Peak (bfilt) -1703769973488018246->6390809394260911759 8070692490875358467 Peak -1703769973488018246->8070692490875358467 9124272632485904141 chip.idr_ppr 8070692490875358467->9124272632485904141 -2635671562618583420 chip.idr 8070692490875358467->-2635671562618583420 -8628228148766943755 chip.overlap 8070692490875358467->-8628228148766943755 -1527532732276820646 chip.overlap_ppr 8070692490875358467->-1527532732276820646 -2930693800264320779 chip.pool_ta 8648697821646482428 TAG-ALIGN -2930693800264320779->8648697821646482428 8648697821646482428->-1439842315078228590 8648697821646482428->-1703769973488018246 8648697821646482428->9124272632485904141 8648697821646482428->-2635671562618583420 8648697821646482428->-8628228148766943755 8648697821646482428->-1527532732276820646 6098890430187482216 chip.call_peak 1144839147843211093 Peak (bfilt) 6098890430187482216->1144839147843211093 3125858342852486581 Peak 6098890430187482216->3125858342852486581 3125858342852486581->-2635671562618583420 3125858342852486581->-8628228148766943755 -2812490175339262900 chip.reproducibility_overlap 3125858342852486581->-2812490175339262900 -3077424838841798158 chip.reproducibility_idr 3125858342852486581->-3077424838841798158 -6714350245989649823 chip.bam2ta -591737366306577688 TAG-ALIGN -6714350245989649823->-591737366306577688 -591737366306577688->-2930693800264320779 -591737366306577688->6098890430187482216 275670732179383564 chip.macs2_signal_track -591737366306577688->275670732179383564 -591737366306577688->9124272632485904141 -591737366306577688->-2812490175339262900 -591737366306577688->-3077424838841798158 -591737366306577688->-1527532732276820646 7328029839785913226 chip.filter 3213436236716423118 SAMstats QC 7328029839785913226->3213436236716423118 1700943700753096101 Filt/deduped BAM 7328029839785913226->1700943700753096101 -4353507852079004785 LibCmplx QC 7328029839785913226->-4353507852079004785 1700943700753096101->-6714350245989649823 7943104777911179893 chip.jsd 1700943700753096101->7943104777911179893 5919334610402706260 chip.align 4895375261783464478 SAMstats QC 5919334610402706260->4895375261783464478 -1494657504338102584 BAM 5919334610402706260->-1494657504338102584 -1494657504338102584->7328029839785913226 -1576401437610840082 chip.xcor -7691108024201180463 XCOR Plot -1576401437610840082->-7691108024201180463 1341417445471522201 BW FC 275670732179383564->1341417445471522201 -5555462389917718632 BW p-val 275670732179383564->-5555462389917718632 -3195983982834062664 FASTQ R1 (1) -3195983982834062664->5919334610402706260 -3195983982834062664->-1576401437610840082 -8247485825104342049 FASTQ R2 (1) -8247485825104342049->5919334610402706260 -4211637891992802402 chip.call_peak 4842051554343942981 Peak (bfilt) -4211637891992802402->4842051554343942981 -6505932789945949848 Peak -4211637891992802402->-6505932789945949848 -6505932789945949848->-2635671562618583420 -6505932789945949848->-8628228148766943755 -6505932789945949848->-2812490175339262900 -6505932789945949848->-3077424838841798158 3269419467885276339 chip.bam2ta 5340947589635029710 TAG-ALIGN 3269419467885276339->5340947589635029710 5340947589635029710->-2930693800264320779 5340947589635029710->-4211637891992802402 -985076739315443547 chip.macs2_signal_track 5340947589635029710->-985076739315443547 5340947589635029710->9124272632485904141 5340947589635029710->-2812490175339262900 5340947589635029710->-3077424838841798158 5340947589635029710->-1527532732276820646 -8182665485364269878 chip.filter -2668663100874471021 SAMstats QC -8182665485364269878->-2668663100874471021 -1821829032398164474 Filt/deduped BAM -8182665485364269878->-1821829032398164474 -6619284633343636909 LibCmplx QC -8182665485364269878->-6619284633343636909 -1821829032398164474->3269419467885276339 -1821829032398164474->7943104777911179893 180390576611776086 chip.align 9053523696589793159 SAMstats QC 180390576611776086->9053523696589793159 -4958302687191181191 BAM 180390576611776086->-4958302687191181191 -4958302687191181191->-8182665485364269878 6139426248630739935 chip.xcor 5751288703813631037 XCOR Plot 6139426248630739935->5751288703813631037 7819491448872115577 BW FC -985076739315443547->7819491448872115577 5186450667532053403 BW p-val -985076739315443547->5186450667532053403 4010946722183865780 FASTQ R1 (1) 4010946722183865780->180390576611776086 4010946722183865780->6139426248630739935 3104566532058938925 FASTQ R2 (1) 3104566532058938925->180390576611776086 -3965914007781682293 chip.pool_ta_ctl -1657262803654515658 TAG-ALIGN -3965914007781682293->-1657262803654515658 -1657262803654515658->-1439842315078228590 -1657262803654515658->-1703769973488018246 -1657262803654515658->6098890430187482216 -1657262803654515658->275670732179383564 -1657262803654515658->-4211637891992802402 -1657262803654515658->-985076739315443547 -1657262803654515658->9124272632485904141 -1657262803654515658->-2812490175339262900 -1657262803654515658->-3077424838841798158 -1657262803654515658->-1527532732276820646 -411966096832571992 chip.bam2ta_ctl -300419193134842744 TAG-ALIGN -411966096832571992->-300419193134842744 -300419193134842744->-3965914007781682293 6027539548403473430 Filt/deduped BAM 6027539548403473430->-411966096832571992 6027539548403473430->7943104777911179893 247248014789738894 chip.bam2ta_ctl -3667817522474723915 TAG-ALIGN 247248014789738894->-3667817522474723915 -3667817522474723915->-3965914007781682293 2324981836511486796 Filt/deduped BAM 2324981836511486796->247248014789738894 2324981836511486796->7943104777911179893 -8459958493121804879 chip.bam2ta_ctl -3725938788481601613 TAG-ALIGN -8459958493121804879->-3725938788481601613 -3725938788481601613->-3965914007781682293 -6206895250362027236 Filt/deduped BAM -6206895250362027236->-8459958493121804879 -6206895250362027236->7943104777911179893 2375051055798025939 chip.bam2ta_ctl 4556056941293926067 TAG-ALIGN 2375051055798025939->4556056941293926067 4556056941293926067->-3965914007781682293 5963242980016807937 Filt/deduped BAM 5963242980016807937->2375051055798025939 5963242980016807937->7943104777911179893 2873557672842120995 chip.bam2ta_ctl 7439607970596372077 TAG-ALIGN 2873557672842120995->7439607970596372077 7439607970596372077->-3965914007781682293 -4278769696805476698 Filt/deduped BAM -4278769696805476698->2873557672842120995 -4278769696805476698->7943104777911179893 4452215395162756003 chip.bam2ta_ctl -4645089572867420102 TAG-ALIGN 4452215395162756003->-4645089572867420102 -4645089572867420102->-3965914007781682293 -3891927953349945108 Filt/deduped BAM -3891927953349945108->4452215395162756003 -3891927953349945108->7943104777911179893 -7872185714455373676 IDR Plot ppr 9124272632485904141->-7872185714455373676 1418170779778897205 IDR Peak ppr 9124272632485904141->1418170779778897205 1418170779778897205->-3077424838841798158 7482537007227416356 IDR Plot rep1_vs_rep2 -2635671562618583420->7482537007227416356 1368387045546443034 IDR NPeak rep1_vs_rep2 -2635671562618583420->1368387045546443034 1368387045546443034->-3077424838841798158 3847610444695412908 Overlap Peak rep1_vs_rep2 -8628228148766943755->3847610444695412908 3847610444695412908->-2812490175339262900 6298933460109816544 Overlap Peak optimal -2812490175339262900->6298933460109816544 714672604876405907 Overlap reproducibility -2812490175339262900->714672604876405907 -3012577184945835943 IDR Peak optimal -3077424838841798158->-3012577184945835943 -3744059188867242320 IDR reproducibility -3077424838841798158->-3744059188867242320 -7975507239005879257 Overlap Peak ppr -1527532732276820646->-7975507239005879257 -7975507239005879257->-2812490175339262900 -9212147109938838448 JSD Plot 7943104777911179893->-9212147109938838448

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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