File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF551AQH.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF551AQH.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF551AQH.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF551AQH.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF551AQH.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF750PYC.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF750PYC.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF750PYC.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF750PYC.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF750PYC.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF551AQH.crop_101-2bp.nodup.pr1_x_ctl.pooled.362M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF551AQH.crop_101-2bp.nodup.pr2_x_ctl.pooled.362M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF551AQH.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF551AQH.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF551AQH.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF551AQH.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF551AQH.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF551AQH.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF750PYC.crop_101-2bp.nodup.pr1_x_ctl.pooled.379M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF750PYC.crop_101-2bp.nodup.pr2_x_ctl.pooled.379M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF750PYC.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF750PYC.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF750PYC.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF750PYC.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF750PYC.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF750PYC.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF551AQH.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/f487d069-33eb-48a0-ad3d-a7c5fecdd0c2/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF551AQH.crop_101-2bp.nodup_x_ctl.pooled.362M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/66550b1b-2ef5-4e74-bfd7-de05a03b3840/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF750PYC.crop_101-2bp.nodup_x_ctl.pooled.379M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -2632237466485636955 chip.macs2_signal_track_pooled -9025300480960401338 BW FC -2632237466485636955->-9025300480960401338 -6878965295256003216 BW p-val -2632237466485636955->-6878965295256003216 3518221155201119139 chip.call_peak_pooled 2980508813415595949 Peak (bfilt) 3518221155201119139->2980508813415595949 -5267321649025033424 Peak 3518221155201119139->-5267321649025033424 -3670922233343050699 chip.idr_ppr -5267321649025033424->-3670922233343050699 5740136057607071333 chip.idr -5267321649025033424->5740136057607071333 8841694997441571123 chip.overlap -5267321649025033424->8841694997441571123 -2162211495132069832 chip.overlap_ppr -5267321649025033424->-2162211495132069832 -8518266528167741251 chip.pool_ta 5124833931857942812 TAG-ALIGN -8518266528167741251->5124833931857942812 5124833931857942812->-2632237466485636955 5124833931857942812->3518221155201119139 5124833931857942812->-3670922233343050699 5124833931857942812->5740136057607071333 5124833931857942812->8841694997441571123 5124833931857942812->-2162211495132069832 1906899089522625417 chip.call_peak -2279593570069253696 Peak (bfilt) 1906899089522625417->-2279593570069253696 8619000410960423307 Peak 1906899089522625417->8619000410960423307 8619000410960423307->5740136057607071333 8619000410960423307->8841694997441571123 -5620766919542599651 chip.reproducibility_overlap 8619000410960423307->-5620766919542599651 -2075304665423429255 chip.reproducibility_idr 8619000410960423307->-2075304665423429255 2199906268704500537 chip.bam2ta 2706983898468000180 TAG-ALIGN 2199906268704500537->2706983898468000180 2706983898468000180->-8518266528167741251 2706983898468000180->1906899089522625417 631587209539839117 chip.macs2_signal_track 2706983898468000180->631587209539839117 2706983898468000180->-3670922233343050699 2706983898468000180->-5620766919542599651 2706983898468000180->-2075304665423429255 2706983898468000180->-2162211495132069832 3117686432994947671 chip.filter -6056972964463184124 SAMstats QC 3117686432994947671->-6056972964463184124 -554929281125739586 Filt/deduped BAM 3117686432994947671->-554929281125739586 -3121442775175422011 LibCmplx QC 3117686432994947671->-3121442775175422011 -554929281125739586->2199906268704500537 -2356657100158369579 chip.jsd -554929281125739586->-2356657100158369579 -6803939415163758889 chip.align 2986591176027929976 SAMstats QC -6803939415163758889->2986591176027929976 -5583459427438238409 BAM -6803939415163758889->-5583459427438238409 -5583459427438238409->3117686432994947671 3278255411374355286 chip.xcor -5515282399625711116 XCOR Plot 3278255411374355286->-5515282399625711116 1895309276873221716 BW FC 631587209539839117->1895309276873221716 6127210981160318551 BW p-val 631587209539839117->6127210981160318551 -5847810996145773523 FASTQ R1 (1) -5847810996145773523->-6803939415163758889 -5847810996145773523->3278255411374355286 -490839603903520468 FASTQ R2 (1) -490839603903520468->-6803939415163758889 4761101916313769747 chip.call_peak -1738448674931155366 Peak (bfilt) 4761101916313769747->-1738448674931155366 -1359365240157285788 Peak 4761101916313769747->-1359365240157285788 -1359365240157285788->5740136057607071333 -1359365240157285788->8841694997441571123 -1359365240157285788->-5620766919542599651 -1359365240157285788->-2075304665423429255 -8613192867162631832 chip.bam2ta 5314149420248894585 TAG-ALIGN -8613192867162631832->5314149420248894585 5314149420248894585->-8518266528167741251 5314149420248894585->4761101916313769747 -6721494376834905500 chip.macs2_signal_track 5314149420248894585->-6721494376834905500 5314149420248894585->-3670922233343050699 5314149420248894585->-5620766919542599651 5314149420248894585->-2075304665423429255 5314149420248894585->-2162211495132069832 -2703838596008470809 chip.filter -5503048900117241555 SAMstats QC -2703838596008470809->-5503048900117241555 4907668008605376955 Filt/deduped BAM -2703838596008470809->4907668008605376955 -4053583410317237154 LibCmplx QC -2703838596008470809->-4053583410317237154 4907668008605376955->-8613192867162631832 4907668008605376955->-2356657100158369579 -6147661665596718750 chip.align 6219006493759957328 SAMstats QC -6147661665596718750->6219006493759957328 918806380450244630 BAM -6147661665596718750->918806380450244630 918806380450244630->-2703838596008470809 4963370944100512870 chip.xcor -3195217892963252194 XCOR Plot 4963370944100512870->-3195217892963252194 3810013344560916220 BW FC -6721494376834905500->3810013344560916220 -6154886121554810065 BW p-val -6721494376834905500->-6154886121554810065 -3780831330945385391 FASTQ R1 (1) -3780831330945385391->-6147661665596718750 -3780831330945385391->4963370944100512870 -6688042742083903874 FASTQ R2 (1) -6688042742083903874->-6147661665596718750 -514706882739846509 chip.pool_ta_ctl 2083623855063539001 TAG-ALIGN -514706882739846509->2083623855063539001 2083623855063539001->-2632237466485636955 2083623855063539001->3518221155201119139 2083623855063539001->1906899089522625417 2083623855063539001->631587209539839117 2083623855063539001->4761101916313769747 2083623855063539001->-6721494376834905500 2083623855063539001->-3670922233343050699 2083623855063539001->-5620766919542599651 2083623855063539001->-2075304665423429255 2083623855063539001->-2162211495132069832 -141325169415102193 chip.bam2ta_ctl -8721087553785801029 TAG-ALIGN -141325169415102193->-8721087553785801029 -8721087553785801029->-514706882739846509 3960667194306876810 Filt/deduped BAM 3960667194306876810->-141325169415102193 3960667194306876810->-2356657100158369579 -7973336622689426707 chip.bam2ta_ctl 1325642974709038447 TAG-ALIGN -7973336622689426707->1325642974709038447 1325642974709038447->-514706882739846509 -6240739752854056257 Filt/deduped BAM -6240739752854056257->-7973336622689426707 -6240739752854056257->-2356657100158369579 -5915705518342477603 chip.bam2ta_ctl -8399813292516829187 TAG-ALIGN -5915705518342477603->-8399813292516829187 -8399813292516829187->-514706882739846509 -5339004420980489304 Filt/deduped BAM -5339004420980489304->-5915705518342477603 -5339004420980489304->-2356657100158369579 8122660739940433777 chip.bam2ta_ctl 2640591641015929431 TAG-ALIGN 8122660739940433777->2640591641015929431 2640591641015929431->-514706882739846509 7088336704565544673 Filt/deduped BAM 7088336704565544673->8122660739940433777 7088336704565544673->-2356657100158369579 3775785152619311617 chip.bam2ta_ctl 5959681930319875870 TAG-ALIGN 3775785152619311617->5959681930319875870 5959681930319875870->-514706882739846509 -5720263891769672925 Filt/deduped BAM -5720263891769672925->3775785152619311617 -5720263891769672925->-2356657100158369579 2586094735164053226 chip.bam2ta_ctl 1686858218208941294 TAG-ALIGN 2586094735164053226->1686858218208941294 1686858218208941294->-514706882739846509 4452442874367546651 Filt/deduped BAM 4452442874367546651->2586094735164053226 4452442874367546651->-2356657100158369579 1890461226881590873 IDR Plot ppr -3670922233343050699->1890461226881590873 -5814153689449326056 IDR Peak ppr -3670922233343050699->-5814153689449326056 -5814153689449326056->-2075304665423429255 2049999573596149185 IDR Plot rep1_vs_rep2 5740136057607071333->2049999573596149185 -5471896836985799510 IDR NPeak rep1_vs_rep2 5740136057607071333->-5471896836985799510 -5471896836985799510->-2075304665423429255 -8158298482236422265 Overlap Peak rep1_vs_rep2 8841694997441571123->-8158298482236422265 -8158298482236422265->-5620766919542599651 -6700330560416092939 Overlap Peak optimal -5620766919542599651->-6700330560416092939 1953707496725186502 Overlap reproducibility -5620766919542599651->1953707496725186502 2802742426828386281 IDR Peak optimal -2075304665423429255->2802742426828386281 -7189867159305098681 IDR reproducibility -2075304665423429255->-7189867159305098681 -3576213549967820930 Overlap Peak ppr -2162211495132069832->-3576213549967820930 -3576213549967820930->-5620766919542599651 6717139133586766031 JSD Plot -2356657100158369579->6717139133586766031

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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