File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c3548036-7f18-4bdd-9223-fea062e056df/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF777QMW.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF777QMW.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF777QMW.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF777QMW.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF777QMW.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF738LVY.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF738LVY.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF738LVY.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF738LVY.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF738LVY.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF777QMW.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF777QMW.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF777QMW.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF777QMW.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF777QMW.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF777QMW.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF738LVY.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF738LVY.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF738LVY.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF738LVY.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF738LVY.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF738LVY.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/43d09aa5-2479-495e-ac5f-aaa59f8f437b/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF777QMW.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/dd71787b-874a-4f62-a3a5-f0f8ef244932/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -1883429467410408002 chip.macs2_signal_track_pooled -4788427112396122895 BW FC -1883429467410408002->-4788427112396122895 2939597694405845923 BW p-val -1883429467410408002->2939597694405845923 3160912935240869924 chip.call_peak_pooled -1179004255041613246 Peak (bfilt) 3160912935240869924->-1179004255041613246 4908599630184578079 Peak 3160912935240869924->4908599630184578079 1037215164234250245 chip.idr_ppr 4908599630184578079->1037215164234250245 -8009468647179821894 chip.idr 4908599630184578079->-8009468647179821894 -3808705260362810178 chip.overlap 4908599630184578079->-3808705260362810178 -3787636819844099375 chip.overlap_ppr 4908599630184578079->-3787636819844099375 8173192712828950512 chip.pool_ta -7315118591450518563 TAG-ALIGN 8173192712828950512->-7315118591450518563 -7315118591450518563->-1883429467410408002 -7315118591450518563->3160912935240869924 -7315118591450518563->1037215164234250245 -7315118591450518563->-8009468647179821894 -7315118591450518563->-3808705260362810178 -7315118591450518563->-3787636819844099375 596750260171632624 chip.call_peak -5593379649694918919 Peak (bfilt) 596750260171632624->-5593379649694918919 6570179240778093092 Peak 596750260171632624->6570179240778093092 6570179240778093092->-8009468647179821894 6570179240778093092->-3808705260362810178 -1486961182960578297 chip.reproducibility_overlap 6570179240778093092->-1486961182960578297 -7966582780653370563 chip.reproducibility_idr 6570179240778093092->-7966582780653370563 -2594970543933548805 chip.bam2ta -3768081957913678971 TAG-ALIGN -2594970543933548805->-3768081957913678971 -3768081957913678971->8173192712828950512 -3768081957913678971->596750260171632624 5212809358146742240 chip.macs2_signal_track -3768081957913678971->5212809358146742240 -3768081957913678971->1037215164234250245 -3768081957913678971->-1486961182960578297 -3768081957913678971->-7966582780653370563 -3768081957913678971->-3787636819844099375 -2884529956123350239 chip.filter 8014377411834116469 SAMstats QC -2884529956123350239->8014377411834116469 3676418660329552946 Filt/deduped BAM -2884529956123350239->3676418660329552946 -3344867303819640251 LibCmplx QC -2884529956123350239->-3344867303819640251 3676418660329552946->-2594970543933548805 8717486624387122000 chip.jsd 3676418660329552946->8717486624387122000 -2462056459348707848 chip.align 1729356829555790450 SAMstats QC -2462056459348707848->1729356829555790450 415299992770749798 BAM -2462056459348707848->415299992770749798 415299992770749798->-2884529956123350239 5074023180943106136 chip.xcor -1628183760510114027 XCOR Plot 5074023180943106136->-1628183760510114027 -49529290520089800 BW FC 5212809358146742240->-49529290520089800 -2083364761067297591 BW p-val 5212809358146742240->-2083364761067297591 5817073066770605371 FASTQ R1 (1) 5817073066770605371->-2462056459348707848 5817073066770605371->5074023180943106136 -3330321284747370801 FASTQ R2 (1) -3330321284747370801->-2462056459348707848 9058651250600854619 chip.call_peak -7257824278935540250 Peak (bfilt) 9058651250600854619->-7257824278935540250 -2328183490750143076 Peak 9058651250600854619->-2328183490750143076 -2328183490750143076->-8009468647179821894 -2328183490750143076->-3808705260362810178 -2328183490750143076->-1486961182960578297 -2328183490750143076->-7966582780653370563 -8776228348389198154 chip.bam2ta 7107920386763199052 TAG-ALIGN -8776228348389198154->7107920386763199052 7107920386763199052->8173192712828950512 7107920386763199052->9058651250600854619 7668682608614180489 chip.macs2_signal_track 7107920386763199052->7668682608614180489 7107920386763199052->1037215164234250245 7107920386763199052->-1486961182960578297 7107920386763199052->-7966582780653370563 7107920386763199052->-3787636819844099375 5137042457032430286 chip.filter 1400693929783658289 SAMstats QC 5137042457032430286->1400693929783658289 1774248591711978475 Filt/deduped BAM 5137042457032430286->1774248591711978475 5841669036757329487 LibCmplx QC 5137042457032430286->5841669036757329487 1774248591711978475->-8776228348389198154 1774248591711978475->8717486624387122000 -138204114489894619 chip.align 2643417342146383191 SAMstats QC -138204114489894619->2643417342146383191 1114492545586176726 BAM -138204114489894619->1114492545586176726 1114492545586176726->5137042457032430286 -9745008127496051 chip.xcor -8626679006872012025 XCOR Plot -9745008127496051->-8626679006872012025 -325199106487038413 BW FC 7668682608614180489->-325199106487038413 8416814142119336914 BW p-val 7668682608614180489->8416814142119336914 1706196718937529797 FASTQ R1 (1) 1706196718937529797->-138204114489894619 1706196718937529797->-9745008127496051 6646393966339549018 FASTQ R2 (1) 6646393966339549018->-138204114489894619 1938863889602837765 chip.pool_ta_ctl 6623977557140874840 TAG-ALIGN 1938863889602837765->6623977557140874840 6623977557140874840->-1883429467410408002 6623977557140874840->3160912935240869924 6623977557140874840->596750260171632624 6623977557140874840->5212809358146742240 6623977557140874840->9058651250600854619 6623977557140874840->7668682608614180489 6623977557140874840->1037215164234250245 6623977557140874840->-1486961182960578297 6623977557140874840->-7966582780653370563 6623977557140874840->-3787636819844099375 -1032023749905777538 chip.bam2ta_ctl 3293469517750854284 TAG-ALIGN -1032023749905777538->3293469517750854284 3293469517750854284->1938863889602837765 -2531967163189984343 Filt/deduped BAM -2531967163189984343->-1032023749905777538 -2531967163189984343->8717486624387122000 6488758328086534992 chip.bam2ta_ctl -3749609032360578606 TAG-ALIGN 6488758328086534992->-3749609032360578606 -3749609032360578606->1938863889602837765 -5542810420737663386 Filt/deduped BAM -5542810420737663386->6488758328086534992 -5542810420737663386->8717486624387122000 824683023089941782 chip.bam2ta_ctl 677449314267577512 TAG-ALIGN 824683023089941782->677449314267577512 677449314267577512->1938863889602837765 -3954085092726614889 Filt/deduped BAM -3954085092726614889->824683023089941782 -3954085092726614889->8717486624387122000 -574144972696563327 chip.bam2ta_ctl -3108859483867665002 TAG-ALIGN -574144972696563327->-3108859483867665002 -3108859483867665002->1938863889602837765 806262854468664833 Filt/deduped BAM 806262854468664833->-574144972696563327 806262854468664833->8717486624387122000 -1424600499713384080 chip.bam2ta_ctl -3413945999641175966 TAG-ALIGN -1424600499713384080->-3413945999641175966 -3413945999641175966->1938863889602837765 -4048231558062621711 Filt/deduped BAM -4048231558062621711->-1424600499713384080 -4048231558062621711->8717486624387122000 5221073910062172247 chip.bam2ta_ctl 6247523446938445935 TAG-ALIGN 5221073910062172247->6247523446938445935 6247523446938445935->1938863889602837765 -9036259009731902650 Filt/deduped BAM -9036259009731902650->5221073910062172247 -9036259009731902650->8717486624387122000 -4541412197101745906 IDR Plot ppr 1037215164234250245->-4541412197101745906 -5716218475260477189 IDR Peak ppr 1037215164234250245->-5716218475260477189 -5716218475260477189->-7966582780653370563 3918765931030814574 IDR Plot rep1_vs_rep2 -8009468647179821894->3918765931030814574 3800041825242530122 IDR NPeak rep1_vs_rep2 -8009468647179821894->3800041825242530122 3800041825242530122->-7966582780653370563 -8585521210390162212 Overlap Peak rep1_vs_rep2 -3808705260362810178->-8585521210390162212 -8585521210390162212->-1486961182960578297 4527889000868799686 Overlap Peak optimal -1486961182960578297->4527889000868799686 251858703570860042 Overlap reproducibility -1486961182960578297->251858703570860042 -216075193717176074 IDR Peak optimal -7966582780653370563->-216075193717176074 1018044753278782521 IDR reproducibility -7966582780653370563->1018044753278782521 7696537373110735149 Overlap Peak ppr -3787636819844099375->7696537373110735149 7696537373110735149->-1486961182960578297 -2055753162010036081 JSD Plot 8717486624387122000->-2055753162010036081

UCSC browser tracks

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