File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/a10a7070-199d-46a9-86eb-c50f7d7322b1/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c4a44d6b-9471-4ee2-9b0e-6cdd4e5fc01e/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF777QMW.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF777QMW.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF777QMW.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF777QMW.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF777QMW.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF738LVY.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF738LVY.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF738LVY.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF738LVY.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF738LVY.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF777QMW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF777QMW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF777QMW.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF777QMW.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF777QMW.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF777QMW.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF777QMW.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF777QMW.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF738LVY.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF738LVY.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF738LVY.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF738LVY.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF738LVY.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF738LVY.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF738LVY.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/02f10574-04ad-4254-873a-c182564aaf2a/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF738LVY.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF777QMW.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF777QMW.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/2648ae63-df1a-4c9c-bc41-ed9b4165b4af/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF738LVY.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 6316843219437178625 chip.macs2_signal_track_pooled 2312843332973456539 BW FC 6316843219437178625->2312843332973456539 -6979200172676364375 BW p-val 6316843219437178625->-6979200172676364375 6248914043324124876 chip.call_peak_pooled 8025876586655849174 Peak (bfilt) 6248914043324124876->8025876586655849174 5194407328267378316 Peak 6248914043324124876->5194407328267378316 613845372930609930 chip.idr_ppr 5194407328267378316->613845372930609930 -6179431936793310733 chip.idr 5194407328267378316->-6179431936793310733 -2634357269339331932 chip.overlap 5194407328267378316->-2634357269339331932 -8968273465952965267 chip.overlap_ppr 5194407328267378316->-8968273465952965267 1985172411222673045 chip.pool_ta -2249736966716515039 TAG-ALIGN 1985172411222673045->-2249736966716515039 -2249736966716515039->6316843219437178625 -2249736966716515039->6248914043324124876 -2249736966716515039->613845372930609930 -2249736966716515039->-6179431936793310733 -2249736966716515039->-2634357269339331932 -2249736966716515039->-8968273465952965267 3003700944082917196 chip.call_peak 4863527969483424257 Peak (bfilt) 3003700944082917196->4863527969483424257 3266209952461426480 Peak 3003700944082917196->3266209952461426480 3266209952461426480->-6179431936793310733 3266209952461426480->-2634357269339331932 -2907675005731135767 chip.reproducibility_overlap 3266209952461426480->-2907675005731135767 -6725566417313112293 chip.reproducibility_idr 3266209952461426480->-6725566417313112293 3640974207355801532 chip.bam2ta -6995165781971578909 TAG-ALIGN 3640974207355801532->-6995165781971578909 -6995165781971578909->1985172411222673045 -6995165781971578909->3003700944082917196 -6310004153890950358 chip.macs2_signal_track -6995165781971578909->-6310004153890950358 -6995165781971578909->613845372930609930 -6995165781971578909->-2907675005731135767 -6995165781971578909->-6725566417313112293 -6995165781971578909->-8968273465952965267 -5618369554665040100 chip.filter -2272109214054836386 SAMstats QC -5618369554665040100->-2272109214054836386 -8562523442025827923 Filt/deduped BAM -5618369554665040100->-8562523442025827923 -3428518023225435622 LibCmplx QC -5618369554665040100->-3428518023225435622 -8562523442025827923->3640974207355801532 7480947837254224979 chip.jsd -8562523442025827923->7480947837254224979 -2562929431343393018 chip.align -5004310937194029274 SAMstats QC -2562929431343393018->-5004310937194029274 -1352851115745911011 BAM -2562929431343393018->-1352851115745911011 -1352851115745911011->-5618369554665040100 -3743863434172518710 chip.xcor -5138325541800166560 XCOR Plot -3743863434172518710->-5138325541800166560 3224457501446385579 BW FC -6310004153890950358->3224457501446385579 -7785288493114845790 BW p-val -6310004153890950358->-7785288493114845790 -7348840091586023150 FASTQ R1 (1) -7348840091586023150->-2562929431343393018 -7348840091586023150->-3743863434172518710 -770837167711811796 FASTQ R2 (1) -770837167711811796->-2562929431343393018 -2766392242927941654 chip.call_peak 8127961583243274761 Peak (bfilt) -2766392242927941654->8127961583243274761 5558421837293790227 Peak -2766392242927941654->5558421837293790227 5558421837293790227->-6179431936793310733 5558421837293790227->-2634357269339331932 5558421837293790227->-2907675005731135767 5558421837293790227->-6725566417313112293 6009817622976185624 chip.bam2ta 5398425021536116356 TAG-ALIGN 6009817622976185624->5398425021536116356 5398425021536116356->1985172411222673045 5398425021536116356->-2766392242927941654 -4767832888096416724 chip.macs2_signal_track 5398425021536116356->-4767832888096416724 5398425021536116356->613845372930609930 5398425021536116356->-2907675005731135767 5398425021536116356->-6725566417313112293 5398425021536116356->-8968273465952965267 -1705665297623740563 chip.filter 5816966505650170041 SAMstats QC -1705665297623740563->5816966505650170041 735433749621559631 Filt/deduped BAM -1705665297623740563->735433749621559631 8620056795689122635 LibCmplx QC -1705665297623740563->8620056795689122635 735433749621559631->6009817622976185624 735433749621559631->7480947837254224979 470542355552584909 chip.align -910319859681504017 SAMstats QC 470542355552584909->-910319859681504017 7454716194605221333 BAM 470542355552584909->7454716194605221333 7454716194605221333->-1705665297623740563 -373330597926707683 chip.xcor -8281002975834574999 XCOR Plot -373330597926707683->-8281002975834574999 -8781206135694547966 BW FC -4767832888096416724->-8781206135694547966 6413899990672550402 BW p-val -4767832888096416724->6413899990672550402 837082287288897552 FASTQ R1 (1) 837082287288897552->470542355552584909 837082287288897552->-373330597926707683 -866785312237976545 FASTQ R2 (1) -866785312237976545->470542355552584909 -2529765052046622345 chip.pool_ta_ctl 1221226503566656459 TAG-ALIGN -2529765052046622345->1221226503566656459 1221226503566656459->6316843219437178625 1221226503566656459->6248914043324124876 1221226503566656459->3003700944082917196 1221226503566656459->-6310004153890950358 1221226503566656459->-2766392242927941654 1221226503566656459->-4767832888096416724 1221226503566656459->613845372930609930 1221226503566656459->-2907675005731135767 1221226503566656459->-6725566417313112293 1221226503566656459->-8968273465952965267 -3962328914183980094 chip.bam2ta_ctl 3036427089709533492 TAG-ALIGN -3962328914183980094->3036427089709533492 3036427089709533492->-2529765052046622345 2384406793182548405 Filt/deduped BAM 2384406793182548405->-3962328914183980094 2384406793182548405->7480947837254224979 -365913233151319444 chip.bam2ta_ctl -4265962374457016467 TAG-ALIGN -365913233151319444->-4265962374457016467 -4265962374457016467->-2529765052046622345 8823472350740289231 Filt/deduped BAM 8823472350740289231->-365913233151319444 8823472350740289231->7480947837254224979 7299854065124227843 chip.bam2ta_ctl -9152227867694176024 TAG-ALIGN 7299854065124227843->-9152227867694176024 -9152227867694176024->-2529765052046622345 1297150389244825946 Filt/deduped BAM 1297150389244825946->7299854065124227843 1297150389244825946->7480947837254224979 -8897247926844919282 chip.bam2ta_ctl -7453973330312609679 TAG-ALIGN -8897247926844919282->-7453973330312609679 -7453973330312609679->-2529765052046622345 3102375753702978851 Filt/deduped BAM 3102375753702978851->-8897247926844919282 3102375753702978851->7480947837254224979 6788560079645283964 chip.bam2ta_ctl 1088258896095367483 TAG-ALIGN 6788560079645283964->1088258896095367483 1088258896095367483->-2529765052046622345 7948457464500408578 Filt/deduped BAM 7948457464500408578->6788560079645283964 7948457464500408578->7480947837254224979 -4907895305136845101 chip.bam2ta_ctl 3701501978988927600 TAG-ALIGN -4907895305136845101->3701501978988927600 3701501978988927600->-2529765052046622345 -4419503793658507401 Filt/deduped BAM -4419503793658507401->-4907895305136845101 -4419503793658507401->7480947837254224979 3367012282765538120 IDR Plot ppr 613845372930609930->3367012282765538120 3618208321512109771 IDR Peak ppr 613845372930609930->3618208321512109771 3618208321512109771->-6725566417313112293 3130812402521700336 IDR Plot rep1_vs_rep2 -6179431936793310733->3130812402521700336 400008006212114589 IDR NPeak rep1_vs_rep2 -6179431936793310733->400008006212114589 400008006212114589->-6725566417313112293 3726485031744857954 Overlap Peak rep1_vs_rep2 -2634357269339331932->3726485031744857954 3726485031744857954->-2907675005731135767 7796469154398458521 Overlap Peak optimal -2907675005731135767->7796469154398458521 -1648726330097121498 Overlap reproducibility -2907675005731135767->-1648726330097121498 -7966447194724488857 IDR Peak optimal -6725566417313112293->-7966447194724488857 -3034362381635448757 IDR reproducibility -6725566417313112293->-3034362381635448757 -5076599690267121987 Overlap Peak ppr -8968273465952965267->-5076599690267121987 -5076599690267121987->-2907675005731135767 8446120905089432471 JSD Plot 7480947837254224979->8446120905089432471

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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