File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF169UAL.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF169UAL.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF169UAL.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF169UAL.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF169UAL.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF623BWW.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF623BWW.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF623BWW.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF623BWW.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF623BWW.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF169UAL.crop_101-2bp.nodup.pr1_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF169UAL.crop_101-2bp.nodup.pr1_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF169UAL.crop_101-2bp.nodup.pr1_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF169UAL.crop_101-2bp.nodup.pr1_x_ctl.pooled.435M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF169UAL.crop_101-2bp.nodup.pr2_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF169UAL.crop_101-2bp.nodup.pr2_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF169UAL.crop_101-2bp.nodup.pr2_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF169UAL.crop_101-2bp.nodup.pr2_x_ctl.pooled.435M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF169UAL.crop_101-2bp.nodup_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF169UAL.crop_101-2bp.nodup_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF169UAL.crop_101-2bp.nodup_x_ctl.pooled.435M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF169UAL.crop_101-2bp.nodup_x_ctl.pooled.435M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF623BWW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF623BWW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF623BWW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF623BWW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF623BWW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF623BWW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF623BWW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF623BWW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF623BWW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF623BWW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF623BWW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF623BWW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF169UAL.crop_101-2bp.nodup.pr1_x_ctl.pooled.435M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF169UAL.crop_101-2bp.nodup.pr2_x_ctl.pooled.435M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF169UAL.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF169UAL.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF169UAL.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF169UAL.crop_101-2bp.nodup_x_ctl.pooled.435M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF169UAL.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF169UAL.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF169UAL.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF623BWW.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF623BWW.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF623BWW.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF623BWW.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF623BWW.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF623BWW.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF623BWW.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF623BWW.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF623BWW.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF169UAL.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/d14ace39-7ee9-48fc-a3ec-3190a16e7f03/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF169UAL.crop_101-2bp.nodup_x_ctl.pooled.435M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF169UAL.crop_101-2bp.nodup_x_ctl.pooled.435M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF623BWW.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/cdddf781-8635-4dad-8ee9-19b08258f12c/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF623BWW.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -6070149276366135929 chip.macs2_signal_track_pooled -1067269175320929144 BW FC -6070149276366135929->-1067269175320929144 5449825312660649517 BW p-val -6070149276366135929->5449825312660649517 4022917938716106617 chip.call_peak_pooled 6741397896993674901 Peak (bfilt) 4022917938716106617->6741397896993674901 -1064904376236290729 Peak 4022917938716106617->-1064904376236290729 -467343192236546259 chip.idr_ppr -1064904376236290729->-467343192236546259 -4713345169169241387 chip.idr -1064904376236290729->-4713345169169241387 3003861610425509510 chip.overlap -1064904376236290729->3003861610425509510 -580856928512963493 chip.overlap_ppr -1064904376236290729->-580856928512963493 4397338430111387070 chip.pool_ta -2811318895733499763 TAG-ALIGN 4397338430111387070->-2811318895733499763 -2811318895733499763->-6070149276366135929 -2811318895733499763->4022917938716106617 -2811318895733499763->-467343192236546259 -2811318895733499763->-4713345169169241387 -2811318895733499763->3003861610425509510 -2811318895733499763->-580856928512963493 -1698891344948579364 chip.call_peak 937323761192129069 Peak (bfilt) -1698891344948579364->937323761192129069 6930999600895290377 Peak -1698891344948579364->6930999600895290377 6930999600895290377->-4713345169169241387 6930999600895290377->3003861610425509510 -333385245016653169 chip.reproducibility_overlap 6930999600895290377->-333385245016653169 -2661942187657437949 chip.reproducibility_idr 6930999600895290377->-2661942187657437949 4872996490997135688 chip.bam2ta 4162868625416378406 TAG-ALIGN 4872996490997135688->4162868625416378406 4162868625416378406->4397338430111387070 4162868625416378406->-1698891344948579364 -4160917139788980011 chip.macs2_signal_track 4162868625416378406->-4160917139788980011 4162868625416378406->-467343192236546259 4162868625416378406->-333385245016653169 4162868625416378406->-2661942187657437949 4162868625416378406->-580856928512963493 4043122098978333744 chip.filter -7649985505766914323 SAMstats QC 4043122098978333744->-7649985505766914323 -5382325690963674771 Filt/deduped BAM 4043122098978333744->-5382325690963674771 6298555792140908756 LibCmplx QC 4043122098978333744->6298555792140908756 -5382325690963674771->4872996490997135688 1727015678231971821 chip.jsd -5382325690963674771->1727015678231971821 -6430729279317777410 chip.align -5733355294498947834 SAMstats QC -6430729279317777410->-5733355294498947834 -3569315685560156357 BAM -6430729279317777410->-3569315685560156357 -3569315685560156357->4043122098978333744 -1462987068664162580 chip.xcor 4781049376185642903 XCOR Plot -1462987068664162580->4781049376185642903 5302246204868087350 BW FC -4160917139788980011->5302246204868087350 1449604748451063432 BW p-val -4160917139788980011->1449604748451063432 -7424597013923274524 FASTQ R1 (1) -7424597013923274524->-6430729279317777410 -7424597013923274524->-1462987068664162580 4468416497719699979 FASTQ R2 (1) 4468416497719699979->-6430729279317777410 -1492997612989885001 chip.call_peak 6887953925885930649 Peak (bfilt) -1492997612989885001->6887953925885930649 -7452793401407624333 Peak -1492997612989885001->-7452793401407624333 -7452793401407624333->-4713345169169241387 -7452793401407624333->3003861610425509510 -7452793401407624333->-333385245016653169 -7452793401407624333->-2661942187657437949 -5133961972855729985 chip.bam2ta 675215756432800525 TAG-ALIGN -5133961972855729985->675215756432800525 675215756432800525->4397338430111387070 675215756432800525->-1492997612989885001 2362956511654079874 chip.macs2_signal_track 675215756432800525->2362956511654079874 675215756432800525->-467343192236546259 675215756432800525->-333385245016653169 675215756432800525->-2661942187657437949 675215756432800525->-580856928512963493 8206395287306276839 chip.filter -1927354789178181349 SAMstats QC 8206395287306276839->-1927354789178181349 -4516229272511038384 Filt/deduped BAM 8206395287306276839->-4516229272511038384 -5305925819654665764 LibCmplx QC 8206395287306276839->-5305925819654665764 -4516229272511038384->-5133961972855729985 -4516229272511038384->1727015678231971821 4880853954303424066 chip.align -3986562739355731963 SAMstats QC 4880853954303424066->-3986562739355731963 3457886866399292185 BAM 4880853954303424066->3457886866399292185 3457886866399292185->8206395287306276839 7743159054579221650 chip.xcor 805768674208291671 XCOR Plot 7743159054579221650->805768674208291671 1388168400715439512 BW FC 2362956511654079874->1388168400715439512 883965682814556121 BW p-val 2362956511654079874->883965682814556121 -155256006688688921 FASTQ R1 (1) -155256006688688921->4880853954303424066 -155256006688688921->7743159054579221650 -2160203540232015430 FASTQ R2 (1) -2160203540232015430->4880853954303424066 6285387697370084928 chip.pool_ta_ctl 6257197658590142262 TAG-ALIGN 6285387697370084928->6257197658590142262 6257197658590142262->-6070149276366135929 6257197658590142262->4022917938716106617 6257197658590142262->-1698891344948579364 6257197658590142262->-4160917139788980011 6257197658590142262->-1492997612989885001 6257197658590142262->2362956511654079874 6257197658590142262->-467343192236546259 6257197658590142262->-333385245016653169 6257197658590142262->-2661942187657437949 6257197658590142262->-580856928512963493 2104228677137338089 chip.bam2ta_ctl -3895500108171100935 TAG-ALIGN 2104228677137338089->-3895500108171100935 -3895500108171100935->6285387697370084928 -336722334776288196 Filt/deduped BAM -336722334776288196->2104228677137338089 -336722334776288196->1727015678231971821 7027215186417649614 chip.bam2ta_ctl 7123780449921986254 TAG-ALIGN 7027215186417649614->7123780449921986254 7123780449921986254->6285387697370084928 -7081185530057930839 Filt/deduped BAM -7081185530057930839->7027215186417649614 -7081185530057930839->1727015678231971821 7335081358896619436 chip.bam2ta_ctl 3252992569560667913 TAG-ALIGN 7335081358896619436->3252992569560667913 3252992569560667913->6285387697370084928 5705318810665549619 Filt/deduped BAM 5705318810665549619->7335081358896619436 5705318810665549619->1727015678231971821 -387625447633516172 chip.bam2ta_ctl 856305273680853999 TAG-ALIGN -387625447633516172->856305273680853999 856305273680853999->6285387697370084928 -4528120407138648610 Filt/deduped BAM -4528120407138648610->-387625447633516172 -4528120407138648610->1727015678231971821 1482750184926880813 chip.bam2ta_ctl 3671999775423858061 TAG-ALIGN 1482750184926880813->3671999775423858061 3671999775423858061->6285387697370084928 -6836627588176467432 Filt/deduped BAM -6836627588176467432->1482750184926880813 -6836627588176467432->1727015678231971821 1216389950624308036 chip.bam2ta_ctl 687504120847300758 TAG-ALIGN 1216389950624308036->687504120847300758 687504120847300758->6285387697370084928 4752776383370703891 Filt/deduped BAM 4752776383370703891->1216389950624308036 4752776383370703891->1727015678231971821 -2984472380230468954 IDR Plot ppr -467343192236546259->-2984472380230468954 1236982603200911084 IDR Peak ppr -467343192236546259->1236982603200911084 1236982603200911084->-2661942187657437949 8976684761879559784 IDR Plot rep1_vs_rep2 -4713345169169241387->8976684761879559784 -8075016452661405478 IDR NPeak rep1_vs_rep2 -4713345169169241387->-8075016452661405478 -8075016452661405478->-2661942187657437949 -5771506940848937302 Overlap Peak rep1_vs_rep2 3003861610425509510->-5771506940848937302 -5771506940848937302->-333385245016653169 -2867418739693065215 Overlap Peak optimal -333385245016653169->-2867418739693065215 2477115855652509661 Overlap reproducibility -333385245016653169->2477115855652509661 8274407663326212577 IDR Peak optimal -2661942187657437949->8274407663326212577 2114693089739642504 IDR reproducibility -2661942187657437949->2114693089739642504 -3277190201631193390 Overlap Peak ppr -580856928512963493->-3277190201631193390 -3277190201631193390->-333385245016653169 -5074193601325441848 JSD Plot 1727015678231971821->-5074193601325441848

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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