File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF531KER.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF531KER.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF531KER.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF531KER.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF531KER.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF315FTB.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF315FTB.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF315FTB.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF315FTB.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF315FTB.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF531KER.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF531KER.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF531KER.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF531KER.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF531KER.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF531KER.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF531KER.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF531KER.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF531KER.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF531KER.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF531KER.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF531KER.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF315FTB.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF315FTB.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF315FTB.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF315FTB.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF315FTB.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF315FTB.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF315FTB.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF315FTB.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF315FTB.crop_101-2bp.nodup_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF315FTB.crop_101-2bp.nodup_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF315FTB.crop_101-2bp.nodup_x_ctl.pooled.298M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF315FTB.crop_101-2bp.nodup_x_ctl.pooled.298M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF531KER.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF531KER.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF531KER.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF531KER.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF531KER.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF531KER.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF531KER.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF531KER.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF531KER.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF315FTB.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF315FTB.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF315FTB.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF315FTB.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF315FTB.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF315FTB.crop_101-2bp.nodup_x_ctl.pooled.298M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF315FTB.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF315FTB.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF315FTB.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF531KER.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/b8ce93c4-6411-4e6d-a3e3-448bb813b372/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF531KER.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF531KER.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF315FTB.crop_101-2bp.nodup_x_ctl.pooled.298M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/559fbd9b-e571-4695-8a8f-8a503c768362/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF315FTB.crop_101-2bp.nodup_x_ctl.pooled.298M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 698733677760806665 chip.macs2_signal_track_pooled 5665273924867525886 BW FC 698733677760806665->5665273924867525886 4652683369528031796 BW p-val 698733677760806665->4652683369528031796 5573929019456025159 chip.call_peak_pooled 738090828379834677 Peak (bfilt) 5573929019456025159->738090828379834677 8267601443707481549 Peak 5573929019456025159->8267601443707481549 -2735798933594499545 chip.idr_ppr 8267601443707481549->-2735798933594499545 -3339630418356887677 chip.idr 8267601443707481549->-3339630418356887677 2396445180694989611 chip.overlap 8267601443707481549->2396445180694989611 5648345724958469578 chip.overlap_ppr 8267601443707481549->5648345724958469578 4648261717689399579 chip.pool_ta 7863215047206449502 TAG-ALIGN 4648261717689399579->7863215047206449502 7863215047206449502->698733677760806665 7863215047206449502->5573929019456025159 7863215047206449502->-2735798933594499545 7863215047206449502->-3339630418356887677 7863215047206449502->2396445180694989611 7863215047206449502->5648345724958469578 1335371735967545850 chip.call_peak 3991786674659412690 Peak (bfilt) 1335371735967545850->3991786674659412690 5676451297213171881 Peak 1335371735967545850->5676451297213171881 5676451297213171881->-3339630418356887677 5676451297213171881->2396445180694989611 -7393050771307302038 chip.reproducibility_overlap 5676451297213171881->-7393050771307302038 4572262403939531745 chip.reproducibility_idr 5676451297213171881->4572262403939531745 3312843109409967877 chip.bam2ta 999073582061661955 TAG-ALIGN 3312843109409967877->999073582061661955 999073582061661955->4648261717689399579 999073582061661955->1335371735967545850 4718567706429010744 chip.macs2_signal_track 999073582061661955->4718567706429010744 999073582061661955->-2735798933594499545 999073582061661955->-7393050771307302038 999073582061661955->4572262403939531745 999073582061661955->5648345724958469578 4639956892667659075 chip.filter 3590191967144992491 SAMstats QC 4639956892667659075->3590191967144992491 -6348440544033680531 Filt/deduped BAM 4639956892667659075->-6348440544033680531 -2368126049881079396 LibCmplx QC 4639956892667659075->-2368126049881079396 -6348440544033680531->3312843109409967877 3060208825637722862 chip.jsd -6348440544033680531->3060208825637722862 3211077201096419843 chip.align -3688146296478991446 SAMstats QC 3211077201096419843->-3688146296478991446 4408674315426041977 BAM 3211077201096419843->4408674315426041977 4408674315426041977->4639956892667659075 -2216014682866820419 chip.xcor 8250484858125817130 XCOR Plot -2216014682866820419->8250484858125817130 -3957692751327363026 BW FC 4718567706429010744->-3957692751327363026 -2402711569701842045 BW p-val 4718567706429010744->-2402711569701842045 -4855329957007791866 FASTQ R1 (1) -4855329957007791866->3211077201096419843 -4855329957007791866->-2216014682866820419 -8990443816586378926 FASTQ R2 (1) -8990443816586378926->3211077201096419843 7108313423535993734 chip.call_peak 8897052536138790331 Peak (bfilt) 7108313423535993734->8897052536138790331 4091774052120136563 Peak 7108313423535993734->4091774052120136563 4091774052120136563->-3339630418356887677 4091774052120136563->2396445180694989611 4091774052120136563->-7393050771307302038 4091774052120136563->4572262403939531745 8947326060547994621 chip.bam2ta 956244480436080145 TAG-ALIGN 8947326060547994621->956244480436080145 956244480436080145->4648261717689399579 956244480436080145->7108313423535993734 5474550267170483711 chip.macs2_signal_track 956244480436080145->5474550267170483711 956244480436080145->-2735798933594499545 956244480436080145->-7393050771307302038 956244480436080145->4572262403939531745 956244480436080145->5648345724958469578 3514918991961268069 chip.filter 4961252146131359422 SAMstats QC 3514918991961268069->4961252146131359422 -8943574793502901152 Filt/deduped BAM 3514918991961268069->-8943574793502901152 -324539633673942730 LibCmplx QC 3514918991961268069->-324539633673942730 -8943574793502901152->8947326060547994621 -8943574793502901152->3060208825637722862 7826442626986949112 chip.align 745053958276877858 SAMstats QC 7826442626986949112->745053958276877858 6794947433378148062 BAM 7826442626986949112->6794947433378148062 6794947433378148062->3514918991961268069 4664374074493133363 chip.xcor -6940925616788479923 XCOR Plot 4664374074493133363->-6940925616788479923 6561871150011951443 BW FC 5474550267170483711->6561871150011951443 -5892270593839549609 BW p-val 5474550267170483711->-5892270593839549609 -8918327395036690767 FASTQ R1 (1) -8918327395036690767->7826442626986949112 -8918327395036690767->4664374074493133363 1202988557339571627 FASTQ R2 (1) 1202988557339571627->7826442626986949112 6958571572726639452 chip.pool_ta_ctl -5411183296352454984 TAG-ALIGN 6958571572726639452->-5411183296352454984 -5411183296352454984->698733677760806665 -5411183296352454984->5573929019456025159 -5411183296352454984->1335371735967545850 -5411183296352454984->4718567706429010744 -5411183296352454984->7108313423535993734 -5411183296352454984->5474550267170483711 -5411183296352454984->-2735798933594499545 -5411183296352454984->-7393050771307302038 -5411183296352454984->4572262403939531745 -5411183296352454984->5648345724958469578 -7383875558928067400 chip.bam2ta_ctl -2762924979538047903 TAG-ALIGN -7383875558928067400->-2762924979538047903 -2762924979538047903->6958571572726639452 5850006576115677058 Filt/deduped BAM 5850006576115677058->-7383875558928067400 5850006576115677058->3060208825637722862 -8194126953970979205 chip.bam2ta_ctl -6482974903051625979 TAG-ALIGN -8194126953970979205->-6482974903051625979 -6482974903051625979->6958571572726639452 5769779170228682314 Filt/deduped BAM 5769779170228682314->-8194126953970979205 5769779170228682314->3060208825637722862 5448587507390589465 chip.bam2ta_ctl -5458807484909533210 TAG-ALIGN 5448587507390589465->-5458807484909533210 -5458807484909533210->6958571572726639452 7762534371338188452 Filt/deduped BAM 7762534371338188452->5448587507390589465 7762534371338188452->3060208825637722862 7919210365393705793 chip.bam2ta_ctl -670652643318233298 TAG-ALIGN 7919210365393705793->-670652643318233298 -670652643318233298->6958571572726639452 -9211473921358306165 Filt/deduped BAM -9211473921358306165->7919210365393705793 -9211473921358306165->3060208825637722862 6253320227158382135 chip.bam2ta_ctl 4560412476787879443 TAG-ALIGN 6253320227158382135->4560412476787879443 4560412476787879443->6958571572726639452 -1755239858304119929 Filt/deduped BAM -1755239858304119929->6253320227158382135 -1755239858304119929->3060208825637722862 1204770465052250922 chip.bam2ta_ctl 7441171308961496372 TAG-ALIGN 1204770465052250922->7441171308961496372 7441171308961496372->6958571572726639452 1954333136294177916 Filt/deduped BAM 1954333136294177916->1204770465052250922 1954333136294177916->3060208825637722862 4515060207970850066 IDR Plot ppr -2735798933594499545->4515060207970850066 -6626555295026921399 IDR Peak ppr -2735798933594499545->-6626555295026921399 -6626555295026921399->4572262403939531745 -6599066153290529574 IDR Plot rep1_vs_rep2 -3339630418356887677->-6599066153290529574 -6258572474216577312 IDR NPeak rep1_vs_rep2 -3339630418356887677->-6258572474216577312 -6258572474216577312->4572262403939531745 -461845854162496195 Overlap Peak rep1_vs_rep2 2396445180694989611->-461845854162496195 -461845854162496195->-7393050771307302038 -9069731616201671776 Overlap Peak optimal -7393050771307302038->-9069731616201671776 2534061615240763514 Overlap reproducibility -7393050771307302038->2534061615240763514 6959326474693548699 IDR Peak optimal 4572262403939531745->6959326474693548699 1849924788296281772 IDR reproducibility 4572262403939531745->1849924788296281772 -3192693994173653426 Overlap Peak ppr 5648345724958469578->-3192693994173653426 -3192693994173653426->-7393050771307302038 -5440717656075789042 JSD Plot 3060208825637722862->-5440717656075789042

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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