File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/a10a7070-199d-46a9-86eb-c50f7d7322b1/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c4a44d6b-9471-4ee2-9b0e-6cdd4e5fc01e/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF061OTP.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF061OTP.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF061OTP.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF061OTP.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF061OTP.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF817CFB.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF817CFB.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF817CFB.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF817CFB.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF817CFB.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF061OTP.crop_101-2bp.nodup.pr1_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF061OTP.crop_101-2bp.nodup.pr1_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF061OTP.crop_101-2bp.nodup.pr1_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF061OTP.crop_101-2bp.nodup.pr1_x_ctl.pooled.396M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF061OTP.crop_101-2bp.nodup.pr2_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF061OTP.crop_101-2bp.nodup.pr2_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF061OTP.crop_101-2bp.nodup.pr2_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF061OTP.crop_101-2bp.nodup.pr2_x_ctl.pooled.396M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF061OTP.crop_101-2bp.nodup_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF061OTP.crop_101-2bp.nodup_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF061OTP.crop_101-2bp.nodup_x_ctl.pooled.396M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF061OTP.crop_101-2bp.nodup_x_ctl.pooled.396M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF817CFB.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF817CFB.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF817CFB.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF817CFB.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF817CFB.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF817CFB.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF817CFB.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF817CFB.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF817CFB.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF817CFB.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF817CFB.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF817CFB.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF061OTP.crop_101-2bp.nodup.pr1_x_ctl.pooled.396M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF061OTP.crop_101-2bp.nodup.pr2_x_ctl.pooled.396M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF061OTP.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF061OTP.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF061OTP.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF061OTP.crop_101-2bp.nodup_x_ctl.pooled.396M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF061OTP.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF061OTP.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF061OTP.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF817CFB.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF817CFB.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF817CFB.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF817CFB.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF817CFB.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF817CFB.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF817CFB.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF817CFB.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF817CFB.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/235f015d-ceb8-4e85-853b-368cf2f70823/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF061OTP.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF061OTP.crop_101-2bp.nodup_x_ctl.pooled.396M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF061OTP.crop_101-2bp.nodup_x_ctl.pooled.396M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF817CFB.crop_101-2bp.nodup_x_ctl.pooled.303M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/062d7e3c-5c5b-4ba8-9f27-8ac944cb24bd/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF817CFB.crop_101-2bp.nodup_x_ctl.pooled.303M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 4052267373253393625 chip.macs2_signal_track_pooled 6823197540449179667 BW FC 4052267373253393625->6823197540449179667 -5996643594937532422 BW p-val 4052267373253393625->-5996643594937532422 3564400972509960084 chip.call_peak_pooled -6338191837773631446 Peak (bfilt) 3564400972509960084->-6338191837773631446 6110129083212136858 Peak 3564400972509960084->6110129083212136858 7376590632491227621 chip.idr_ppr 6110129083212136858->7376590632491227621 -5871407551676769922 chip.idr 6110129083212136858->-5871407551676769922 -2464642858250533049 chip.overlap 6110129083212136858->-2464642858250533049 -3635376847438855488 chip.overlap_ppr 6110129083212136858->-3635376847438855488 -6654603867461368311 chip.pool_ta 9016600320420271517 TAG-ALIGN -6654603867461368311->9016600320420271517 9016600320420271517->4052267373253393625 9016600320420271517->3564400972509960084 9016600320420271517->7376590632491227621 9016600320420271517->-5871407551676769922 9016600320420271517->-2464642858250533049 9016600320420271517->-3635376847438855488 3590932701287065636 chip.call_peak 3310479204327223581 Peak (bfilt) 3590932701287065636->3310479204327223581 -7200659698802626617 Peak 3590932701287065636->-7200659698802626617 -7200659698802626617->-5871407551676769922 -7200659698802626617->-2464642858250533049 -413436949883255854 chip.reproducibility_overlap -7200659698802626617->-413436949883255854 1931149908590964746 chip.reproducibility_idr -7200659698802626617->1931149908590964746 8988053601737163916 chip.bam2ta 5341561664248395398 TAG-ALIGN 8988053601737163916->5341561664248395398 5341561664248395398->-6654603867461368311 5341561664248395398->3590932701287065636 1337688402709608764 chip.macs2_signal_track 5341561664248395398->1337688402709608764 5341561664248395398->7376590632491227621 5341561664248395398->-413436949883255854 5341561664248395398->1931149908590964746 5341561664248395398->-3635376847438855488 -7843897074477483960 chip.filter -5208189824181459368 SAMstats QC -7843897074477483960->-5208189824181459368 -2109105384364478371 Filt/deduped BAM -7843897074477483960->-2109105384364478371 -2775592890037455970 LibCmplx QC -7843897074477483960->-2775592890037455970 -2109105384364478371->8988053601737163916 -888493255167187973 chip.jsd -2109105384364478371->-888493255167187973 -2403311379407908331 chip.align 722210358771295795 SAMstats QC -2403311379407908331->722210358771295795 -3817306294178257073 BAM -2403311379407908331->-3817306294178257073 -3817306294178257073->-7843897074477483960 -2022181892071371005 chip.xcor -7662372969160934243 XCOR Plot -2022181892071371005->-7662372969160934243 -3272108490100556540 BW FC 1337688402709608764->-3272108490100556540 1372499725257798662 BW p-val 1337688402709608764->1372499725257798662 5891482252650941058 FASTQ R1 (1) 5891482252650941058->-2403311379407908331 5891482252650941058->-2022181892071371005 -4978062294683519548 FASTQ R2 (1) -4978062294683519548->-2403311379407908331 -1337214813516231937 chip.call_peak -4855009380511779289 Peak (bfilt) -1337214813516231937->-4855009380511779289 -7785921863207238602 Peak -1337214813516231937->-7785921863207238602 -7785921863207238602->-5871407551676769922 -7785921863207238602->-2464642858250533049 -7785921863207238602->-413436949883255854 -7785921863207238602->1931149908590964746 -1517222937162185603 chip.bam2ta 5120981948463698661 TAG-ALIGN -1517222937162185603->5120981948463698661 5120981948463698661->-6654603867461368311 5120981948463698661->-1337214813516231937 1651590958477438916 chip.macs2_signal_track 5120981948463698661->1651590958477438916 5120981948463698661->7376590632491227621 5120981948463698661->-413436949883255854 5120981948463698661->1931149908590964746 5120981948463698661->-3635376847438855488 5400813679303685536 chip.filter 8630124161254120198 SAMstats QC 5400813679303685536->8630124161254120198 -5882810256487048142 Filt/deduped BAM 5400813679303685536->-5882810256487048142 8712197860916255030 LibCmplx QC 5400813679303685536->8712197860916255030 -5882810256487048142->-1517222937162185603 -5882810256487048142->-888493255167187973 5689610445180639732 chip.align 3389013583124253071 SAMstats QC 5689610445180639732->3389013583124253071 1228848305583718921 BAM 5689610445180639732->1228848305583718921 1228848305583718921->5400813679303685536 4429500527326129220 chip.xcor 1527085690582826932 XCOR Plot 4429500527326129220->1527085690582826932 -6933397840310561634 BW FC 1651590958477438916->-6933397840310561634 -8011804045507869922 BW p-val 1651590958477438916->-8011804045507869922 8308251116022427577 FASTQ R1 (1) 8308251116022427577->5689610445180639732 8308251116022427577->4429500527326129220 -5163682244596959005 FASTQ R2 (1) -5163682244596959005->5689610445180639732 -9110870820810815778 chip.pool_ta_ctl -2523429629709078784 TAG-ALIGN -9110870820810815778->-2523429629709078784 -2523429629709078784->4052267373253393625 -2523429629709078784->3564400972509960084 -2523429629709078784->3590932701287065636 -2523429629709078784->1337688402709608764 -2523429629709078784->-1337214813516231937 -2523429629709078784->1651590958477438916 -2523429629709078784->7376590632491227621 -2523429629709078784->-413436949883255854 -2523429629709078784->1931149908590964746 -2523429629709078784->-3635376847438855488 8623939395586345186 chip.bam2ta_ctl 1367337427173713831 TAG-ALIGN 8623939395586345186->1367337427173713831 1367337427173713831->-9110870820810815778 -3854748589485016952 Filt/deduped BAM -3854748589485016952->8623939395586345186 -3854748589485016952->-888493255167187973 -7718727624000174565 chip.bam2ta_ctl 5947727368625689652 TAG-ALIGN -7718727624000174565->5947727368625689652 5947727368625689652->-9110870820810815778 -3474854913698506737 Filt/deduped BAM -3474854913698506737->-7718727624000174565 -3474854913698506737->-888493255167187973 -8754181320184753761 chip.bam2ta_ctl -7017031119664026407 TAG-ALIGN -8754181320184753761->-7017031119664026407 -7017031119664026407->-9110870820810815778 7861982744139659689 Filt/deduped BAM 7861982744139659689->-8754181320184753761 7861982744139659689->-888493255167187973 458952808200193198 chip.bam2ta_ctl 7727201685364633148 TAG-ALIGN 458952808200193198->7727201685364633148 7727201685364633148->-9110870820810815778 -8339405681706567396 Filt/deduped BAM -8339405681706567396->458952808200193198 -8339405681706567396->-888493255167187973 -3478301621584528287 chip.bam2ta_ctl -6543337124038144545 TAG-ALIGN -3478301621584528287->-6543337124038144545 -6543337124038144545->-9110870820810815778 -8488332569095991049 Filt/deduped BAM -8488332569095991049->-3478301621584528287 -8488332569095991049->-888493255167187973 -5197876324519241420 chip.bam2ta_ctl -6034396038815875524 TAG-ALIGN -5197876324519241420->-6034396038815875524 -6034396038815875524->-9110870820810815778 -1193175967628722192 Filt/deduped BAM -1193175967628722192->-5197876324519241420 -1193175967628722192->-888493255167187973 -7638512409646178910 IDR Plot ppr 7376590632491227621->-7638512409646178910 -828874595833667190 IDR Peak ppr 7376590632491227621->-828874595833667190 -828874595833667190->1931149908590964746 -6200787873584481744 IDR Plot rep1_vs_rep2 -5871407551676769922->-6200787873584481744 126135932542255574 IDR NPeak rep1_vs_rep2 -5871407551676769922->126135932542255574 126135932542255574->1931149908590964746 -5905308881028961493 Overlap Peak rep1_vs_rep2 -2464642858250533049->-5905308881028961493 -5905308881028961493->-413436949883255854 3639849490342076682 Overlap Peak optimal -413436949883255854->3639849490342076682 5688492571033865714 Overlap reproducibility -413436949883255854->5688492571033865714 3052257738013111798 IDR Peak optimal 1931149908590964746->3052257738013111798 3630761180797901355 IDR reproducibility 1931149908590964746->3630761180797901355 6841118631967787857 Overlap Peak ppr -3635376847438855488->6841118631967787857 6841118631967787857->-413436949883255854 7607487700427250538 JSD Plot -888493255167187973->7607487700427250538

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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