File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF070RBE.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF070RBE.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF070RBE.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF070RBE.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF070RBE.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF327HOL.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF327HOL.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF327HOL.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF327HOL.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF327HOL.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF070RBE.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF070RBE.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF070RBE.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF070RBE.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF070RBE.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF070RBE.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF327HOL.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF327HOL.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF327HOL.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF327HOL.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF327HOL.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF327HOL.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF070RBE.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 522176316354904736 chip.macs2_signal_track_pooled 2507123672605962068 BW FC 522176316354904736->2507123672605962068 -3900852967742674941 BW p-val 522176316354904736->-3900852967742674941 5714092299127711622 chip.call_peak_pooled -2769349317248915136 Peak (bfilt) 5714092299127711622->-2769349317248915136 -7322709068645633674 Peak 5714092299127711622->-7322709068645633674 8991299333537677466 chip.idr_ppr -7322709068645633674->8991299333537677466 2579790162984103152 chip.idr -7322709068645633674->2579790162984103152 909892099008416981 chip.overlap -7322709068645633674->909892099008416981 854953454816914378 chip.overlap_ppr -7322709068645633674->854953454816914378 7697993452996262844 chip.pool_ta 5945001145813877506 TAG-ALIGN 7697993452996262844->5945001145813877506 5945001145813877506->522176316354904736 5945001145813877506->5714092299127711622 5945001145813877506->8991299333537677466 5945001145813877506->2579790162984103152 5945001145813877506->909892099008416981 5945001145813877506->854953454816914378 -4171009811872484121 chip.call_peak -3071000223923877602 Peak (bfilt) -4171009811872484121->-3071000223923877602 -6662433210926724315 Peak -4171009811872484121->-6662433210926724315 -6662433210926724315->2579790162984103152 -6662433210926724315->909892099008416981 -9062296625166148385 chip.reproducibility_overlap -6662433210926724315->-9062296625166148385 5438908927174286476 chip.reproducibility_idr -6662433210926724315->5438908927174286476 -5961879506143150252 chip.bam2ta 135859236870430275 TAG-ALIGN -5961879506143150252->135859236870430275 135859236870430275->7697993452996262844 135859236870430275->-4171009811872484121 6371117200161223819 chip.macs2_signal_track 135859236870430275->6371117200161223819 135859236870430275->8991299333537677466 135859236870430275->-9062296625166148385 135859236870430275->5438908927174286476 135859236870430275->854953454816914378 -1371577855584248699 chip.filter 7771392370348376713 SAMstats QC -1371577855584248699->7771392370348376713 7630840163061876068 Filt/deduped BAM -1371577855584248699->7630840163061876068 -5111747355798139381 LibCmplx QC -1371577855584248699->-5111747355798139381 7630840163061876068->-5961879506143150252 7975341413767174806 chip.jsd 7630840163061876068->7975341413767174806 -1168807341881333983 chip.align -6104136270770598876 SAMstats QC -1168807341881333983->-6104136270770598876 -7308837140285828921 BAM -1168807341881333983->-7308837140285828921 -7308837140285828921->-1371577855584248699 -4627055661508680085 chip.xcor -344414135291963429 XCOR Plot -4627055661508680085->-344414135291963429 -2671015294793136905 BW FC 6371117200161223819->-2671015294793136905 6086343586830820602 BW p-val 6371117200161223819->6086343586830820602 -3442886934940613080 FASTQ R1 (1) -3442886934940613080->-1168807341881333983 -3442886934940613080->-4627055661508680085 1210902462172817312 FASTQ R2 (1) 1210902462172817312->-1168807341881333983 -8374328404147370968 chip.call_peak -4224062365369468750 Peak (bfilt) -8374328404147370968->-4224062365369468750 -5417266817122702790 Peak -8374328404147370968->-5417266817122702790 -5417266817122702790->2579790162984103152 -5417266817122702790->909892099008416981 -5417266817122702790->-9062296625166148385 -5417266817122702790->5438908927174286476 -7116126948680628775 chip.bam2ta 3363988102834225374 TAG-ALIGN -7116126948680628775->3363988102834225374 3363988102834225374->7697993452996262844 3363988102834225374->-8374328404147370968 1604492606058828549 chip.macs2_signal_track 3363988102834225374->1604492606058828549 3363988102834225374->8991299333537677466 3363988102834225374->-9062296625166148385 3363988102834225374->5438908927174286476 3363988102834225374->854953454816914378 -3382853493813222744 chip.filter 4854421246577070277 SAMstats QC -3382853493813222744->4854421246577070277 -2267361890727567139 Filt/deduped BAM -3382853493813222744->-2267361890727567139 431257374604781177 LibCmplx QC -3382853493813222744->431257374604781177 -2267361890727567139->-7116126948680628775 -2267361890727567139->7975341413767174806 3419572346253800305 chip.align 852365659354282653 SAMstats QC 3419572346253800305->852365659354282653 4385726941013372450 BAM 3419572346253800305->4385726941013372450 4385726941013372450->-3382853493813222744 -4773611326572382625 chip.xcor -8402938893573309850 XCOR Plot -4773611326572382625->-8402938893573309850 -4385112144761824601 BW FC 1604492606058828549->-4385112144761824601 3817723368240461513 BW p-val 1604492606058828549->3817723368240461513 -8853102882945003569 FASTQ R1 (1) -8853102882945003569->3419572346253800305 -8853102882945003569->-4773611326572382625 -6297305014577374833 FASTQ R2 (1) -6297305014577374833->3419572346253800305 -4456410318565950867 chip.pool_ta_ctl 8848723134752579039 TAG-ALIGN -4456410318565950867->8848723134752579039 8848723134752579039->522176316354904736 8848723134752579039->5714092299127711622 8848723134752579039->-4171009811872484121 8848723134752579039->6371117200161223819 8848723134752579039->-8374328404147370968 8848723134752579039->1604492606058828549 8848723134752579039->8991299333537677466 8848723134752579039->-9062296625166148385 8848723134752579039->5438908927174286476 8848723134752579039->854953454816914378 -1999988231991035427 chip.bam2ta_ctl 8672728078277735597 TAG-ALIGN -1999988231991035427->8672728078277735597 8672728078277735597->-4456410318565950867 -7042760885981348512 Filt/deduped BAM -7042760885981348512->-1999988231991035427 -7042760885981348512->7975341413767174806 3596357081970966071 chip.bam2ta_ctl 7363039842962064511 TAG-ALIGN 3596357081970966071->7363039842962064511 7363039842962064511->-4456410318565950867 -4711455216590505869 Filt/deduped BAM -4711455216590505869->3596357081970966071 -4711455216590505869->7975341413767174806 -7997086169663572647 chip.bam2ta_ctl 9092588669455062312 TAG-ALIGN -7997086169663572647->9092588669455062312 9092588669455062312->-4456410318565950867 9041020989725118493 Filt/deduped BAM 9041020989725118493->-7997086169663572647 9041020989725118493->7975341413767174806 4501299408202244796 chip.bam2ta_ctl 2074727704982143943 TAG-ALIGN 4501299408202244796->2074727704982143943 2074727704982143943->-4456410318565950867 1669661898735746986 Filt/deduped BAM 1669661898735746986->4501299408202244796 1669661898735746986->7975341413767174806 -2644916299096867225 chip.bam2ta_ctl 4257278733888938236 TAG-ALIGN -2644916299096867225->4257278733888938236 4257278733888938236->-4456410318565950867 6130152232778898441 Filt/deduped BAM 6130152232778898441->-2644916299096867225 6130152232778898441->7975341413767174806 -8404233373604684648 chip.bam2ta_ctl 9178043934787236066 TAG-ALIGN -8404233373604684648->9178043934787236066 9178043934787236066->-4456410318565950867 9115037118235230571 Filt/deduped BAM 9115037118235230571->-8404233373604684648 9115037118235230571->7975341413767174806 -8794049811847243671 IDR Plot ppr 8991299333537677466->-8794049811847243671 8875130223049968879 IDR Peak ppr 8991299333537677466->8875130223049968879 8875130223049968879->5438908927174286476 -7056937337910041668 IDR Plot rep1_vs_rep2 2579790162984103152->-7056937337910041668 -4066244857444418969 IDR NPeak rep1_vs_rep2 2579790162984103152->-4066244857444418969 -4066244857444418969->5438908927174286476 -1087301765264209928 Overlap Peak rep1_vs_rep2 909892099008416981->-1087301765264209928 -1087301765264209928->-9062296625166148385 6602435288150984590 Overlap Peak optimal -9062296625166148385->6602435288150984590 1834377811854147649 Overlap reproducibility -9062296625166148385->1834377811854147649 7081732030176005192 IDR Peak optimal 5438908927174286476->7081732030176005192 -5254037961637650228 IDR reproducibility 5438908927174286476->-5254037961637650228 -2158257353511355828 Overlap Peak ppr 854953454816914378->-2158257353511355828 -2158257353511355828->-9062296625166148385 -167725121749554429 JSD Plot 7975341413767174806->-167725121749554429

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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