File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF070RBE.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF070RBE.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF070RBE.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF070RBE.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF070RBE.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF327HOL.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF327HOL.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF327HOL.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF327HOL.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF327HOL.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF070RBE.crop_101-2bp.nodup.pr1_x_ctl.pooled.282M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF070RBE.crop_101-2bp.nodup.pr2_x_ctl.pooled.282M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF070RBE.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF070RBE.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF070RBE.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF070RBE.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF070RBE.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF070RBE.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF327HOL.crop_101-2bp.nodup.pr1_x_ctl.pooled.224M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF327HOL.crop_101-2bp.nodup.pr2_x_ctl.pooled.224M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF327HOL.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF327HOL.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF327HOL.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF327HOL.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF327HOL.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF327HOL.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF070RBE.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/d1ae8786-9643-4699-9f72-3276bf3f00e1/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF070RBE.crop_101-2bp.nodup_x_ctl.pooled.282M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/3e1fd054-5ec1-4c67-becb-2b3ad10e8324/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF327HOL.crop_101-2bp.nodup_x_ctl.pooled.224M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -2128079570013088005 chip.macs2_signal_track_pooled 2806265712050240998 BW FC -2128079570013088005->2806265712050240998 5019130924704203289 BW p-val -2128079570013088005->5019130924704203289 7161206926813832775 chip.call_peak_pooled -8671122042578162301 Peak (bfilt) 7161206926813832775->-8671122042578162301 5479467446592970204 Peak 7161206926813832775->5479467446592970204 8311750471202864526 chip.idr_ppr 5479467446592970204->8311750471202864526 -7859203178367559775 chip.idr 5479467446592970204->-7859203178367559775 7098929023291719857 chip.overlap 5479467446592970204->7098929023291719857 6365994852661415203 chip.overlap_ppr 5479467446592970204->6365994852661415203 8236103493931915871 chip.pool_ta 8693786045802697045 TAG-ALIGN 8236103493931915871->8693786045802697045 8693786045802697045->-2128079570013088005 8693786045802697045->7161206926813832775 8693786045802697045->8311750471202864526 8693786045802697045->-7859203178367559775 8693786045802697045->7098929023291719857 8693786045802697045->6365994852661415203 9211509603474570692 chip.call_peak 5096655437322319804 Peak (bfilt) 9211509603474570692->5096655437322319804 -4989553410570785456 Peak 9211509603474570692->-4989553410570785456 -4989553410570785456->-7859203178367559775 -4989553410570785456->7098929023291719857 -1174358884621490774 chip.reproducibility_overlap -4989553410570785456->-1174358884621490774 3744793311087120048 chip.reproducibility_idr -4989553410570785456->3744793311087120048 1617978732219178986 chip.bam2ta -5864059310811918742 TAG-ALIGN 1617978732219178986->-5864059310811918742 -5864059310811918742->8236103493931915871 -5864059310811918742->9211509603474570692 8781200227342059770 chip.macs2_signal_track -5864059310811918742->8781200227342059770 -5864059310811918742->8311750471202864526 -5864059310811918742->-1174358884621490774 -5864059310811918742->3744793311087120048 -5864059310811918742->6365994852661415203 4999030993137118804 chip.filter 8743818224809700153 SAMstats QC 4999030993137118804->8743818224809700153 -900906737779934054 Filt/deduped BAM 4999030993137118804->-900906737779934054 9167068749116777098 LibCmplx QC 4999030993137118804->9167068749116777098 -900906737779934054->1617978732219178986 -5376216909024163964 chip.jsd -900906737779934054->-5376216909024163964 -1462293381407978277 chip.align -8714654582798561981 SAMstats QC -1462293381407978277->-8714654582798561981 1714770973340519596 BAM -1462293381407978277->1714770973340519596 1714770973340519596->4999030993137118804 -1470068237572820602 chip.xcor -7512075314347166353 XCOR Plot -1470068237572820602->-7512075314347166353 -6384194102261658487 BW FC 8781200227342059770->-6384194102261658487 3427932502735981823 BW p-val 8781200227342059770->3427932502735981823 -5355154723684826885 FASTQ R1 (1) -5355154723684826885->-1462293381407978277 -5355154723684826885->-1470068237572820602 -577021398516510771 FASTQ R2 (1) -577021398516510771->-1462293381407978277 6535656163746916403 chip.call_peak -5030361016998022723 Peak (bfilt) 6535656163746916403->-5030361016998022723 748180365657740102 Peak 6535656163746916403->748180365657740102 748180365657740102->-7859203178367559775 748180365657740102->7098929023291719857 748180365657740102->-1174358884621490774 748180365657740102->3744793311087120048 7472491247571765028 chip.bam2ta 7448565747816851099 TAG-ALIGN 7472491247571765028->7448565747816851099 7448565747816851099->8236103493931915871 7448565747816851099->6535656163746916403 7089625246820503829 chip.macs2_signal_track 7448565747816851099->7089625246820503829 7448565747816851099->8311750471202864526 7448565747816851099->-1174358884621490774 7448565747816851099->3744793311087120048 7448565747816851099->6365994852661415203 1103601568083880274 chip.filter -928804424780220784 SAMstats QC 1103601568083880274->-928804424780220784 -4153605275119354360 Filt/deduped BAM 1103601568083880274->-4153605275119354360 8087410650024633348 LibCmplx QC 1103601568083880274->8087410650024633348 -4153605275119354360->7472491247571765028 -4153605275119354360->-5376216909024163964 2701597392631470521 chip.align 3933491668545909943 SAMstats QC 2701597392631470521->3933491668545909943 5137917231663163700 BAM 2701597392631470521->5137917231663163700 5137917231663163700->1103601568083880274 7414692104836166719 chip.xcor 3989189218622676022 XCOR Plot 7414692104836166719->3989189218622676022 3899183475008846188 BW FC 7089625246820503829->3899183475008846188 -4914381566768185462 BW p-val 7089625246820503829->-4914381566768185462 -6064953674462404902 FASTQ R1 (1) -6064953674462404902->2701597392631470521 -6064953674462404902->7414692104836166719 -5723690291077895846 FASTQ R2 (1) -5723690291077895846->2701597392631470521 1526684764904137122 chip.pool_ta_ctl -6801252021244078219 TAG-ALIGN 1526684764904137122->-6801252021244078219 -6801252021244078219->-2128079570013088005 -6801252021244078219->7161206926813832775 -6801252021244078219->9211509603474570692 -6801252021244078219->8781200227342059770 -6801252021244078219->6535656163746916403 -6801252021244078219->7089625246820503829 -6801252021244078219->8311750471202864526 -6801252021244078219->-1174358884621490774 -6801252021244078219->3744793311087120048 -6801252021244078219->6365994852661415203 5223498745338322434 chip.bam2ta_ctl -4446741182900404769 TAG-ALIGN 5223498745338322434->-4446741182900404769 -4446741182900404769->1526684764904137122 -3765904730949391118 Filt/deduped BAM -3765904730949391118->5223498745338322434 -3765904730949391118->-5376216909024163964 6637338686694412549 chip.bam2ta_ctl -5696047218268729962 TAG-ALIGN 6637338686694412549->-5696047218268729962 -5696047218268729962->1526684764904137122 -8581981912951029847 Filt/deduped BAM -8581981912951029847->6637338686694412549 -8581981912951029847->-5376216909024163964 -4516230883464330716 chip.bam2ta_ctl 5895735266879923950 TAG-ALIGN -4516230883464330716->5895735266879923950 5895735266879923950->1526684764904137122 2249390816409791417 Filt/deduped BAM 2249390816409791417->-4516230883464330716 2249390816409791417->-5376216909024163964 -6085362773486031265 chip.bam2ta_ctl 1389330608718673056 TAG-ALIGN -6085362773486031265->1389330608718673056 1389330608718673056->1526684764904137122 -251215100981760473 Filt/deduped BAM -251215100981760473->-6085362773486031265 -251215100981760473->-5376216909024163964 -1021738717814405901 chip.bam2ta_ctl -1490163381364686644 TAG-ALIGN -1021738717814405901->-1490163381364686644 -1490163381364686644->1526684764904137122 7173644140401184738 Filt/deduped BAM 7173644140401184738->-1021738717814405901 7173644140401184738->-5376216909024163964 -985749519288062879 chip.bam2ta_ctl -6163503022953929833 TAG-ALIGN -985749519288062879->-6163503022953929833 -6163503022953929833->1526684764904137122 -5233200034478079542 Filt/deduped BAM -5233200034478079542->-985749519288062879 -5233200034478079542->-5376216909024163964 6514540869365442595 IDR Plot ppr 8311750471202864526->6514540869365442595 -5751754528088846154 IDR Peak ppr 8311750471202864526->-5751754528088846154 -5751754528088846154->3744793311087120048 7937038429546907211 IDR Plot rep1_vs_rep2 -7859203178367559775->7937038429546907211 1069889283903770828 IDR NPeak rep1_vs_rep2 -7859203178367559775->1069889283903770828 1069889283903770828->3744793311087120048 -6411355482918704418 Overlap Peak rep1_vs_rep2 7098929023291719857->-6411355482918704418 -6411355482918704418->-1174358884621490774 7932147497384429117 Overlap Peak optimal -1174358884621490774->7932147497384429117 3642759191227301529 Overlap reproducibility -1174358884621490774->3642759191227301529 3782154418446706060 IDR Peak optimal 3744793311087120048->3782154418446706060 715088240635197978 IDR reproducibility 3744793311087120048->715088240635197978 -847436108646530775 Overlap Peak ppr 6365994852661415203->-847436108646530775 -847436108646530775->-1174358884621490774 1476675212172533368 JSD Plot -5376216909024163964->1476675212172533368

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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