File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF991IIZ.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF991IIZ.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF991IIZ.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF991IIZ.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF991IIZ.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF051TFE.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF051TFE.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF051TFE.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF051TFE.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF051TFE.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF991IIZ.crop_101-2bp.nodup.pr1_x_ctl.pooled.439M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF991IIZ.crop_101-2bp.nodup.pr1_x_ctl.pooled.439M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF991IIZ.crop_101-2bp.nodup.pr1_x_ctl.pooled.439M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF991IIZ.crop_101-2bp.nodup.pr1_x_ctl.pooled.439M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF991IIZ.crop_101-2bp.nodup.pr2_x_ctl.pooled.439M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF991IIZ.crop_101-2bp.nodup.pr2_x_ctl.pooled.439M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF991IIZ.crop_101-2bp.nodup.pr2_x_ctl.pooled.439M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF991IIZ.crop_101-2bp.nodup.pr2_x_ctl.pooled.439M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF991IIZ.crop_101-2bp.nodup_x_ctl.pooled.439M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF991IIZ.crop_101-2bp.nodup_x_ctl.pooled.439M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF991IIZ.crop_101-2bp.nodup_x_ctl.pooled.439M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF991IIZ.crop_101-2bp.nodup_x_ctl.pooled.439M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF051TFE.crop_101-2bp.nodup.pr1_x_ctl.pooled.370M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF051TFE.crop_101-2bp.nodup.pr1_x_ctl.pooled.370M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF051TFE.crop_101-2bp.nodup.pr1_x_ctl.pooled.370M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF051TFE.crop_101-2bp.nodup.pr1_x_ctl.pooled.370M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF051TFE.crop_101-2bp.nodup.pr2_x_ctl.pooled.370M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF051TFE.crop_101-2bp.nodup.pr2_x_ctl.pooled.370M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF051TFE.crop_101-2bp.nodup.pr2_x_ctl.pooled.370M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF051TFE.crop_101-2bp.nodup.pr2_x_ctl.pooled.370M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF051TFE.crop_101-2bp.nodup_x_ctl.pooled.370M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF051TFE.crop_101-2bp.nodup_x_ctl.pooled.370M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF051TFE.crop_101-2bp.nodup_x_ctl.pooled.370M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF051TFE.crop_101-2bp.nodup_x_ctl.pooled.370M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF991IIZ.crop_101-2bp.nodup.pr1_x_ctl.pooled.439M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF991IIZ.crop_101-2bp.nodup.pr2_x_ctl.pooled.439M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF991IIZ.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF991IIZ.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF991IIZ.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF991IIZ.crop_101-2bp.nodup_x_ctl.pooled.439M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF991IIZ.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF991IIZ.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF991IIZ.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF051TFE.crop_101-2bp.nodup.pr1_x_ctl.pooled.370M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF051TFE.crop_101-2bp.nodup.pr2_x_ctl.pooled.370M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF051TFE.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF051TFE.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF051TFE.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF051TFE.crop_101-2bp.nodup_x_ctl.pooled.370M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF051TFE.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF051TFE.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF051TFE.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF991IIZ.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF991IIZ.crop_101-2bp.nodup_x_ctl.pooled.439M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF991IIZ.crop_101-2bp.nodup_x_ctl.pooled.439M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF051TFE.crop_101-2bp.nodup_x_ctl.pooled.370M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/faffae4c-ed29-450d-bbb6-8350ca9790a5/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF051TFE.crop_101-2bp.nodup_x_ctl.pooled.370M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -4775905216146785996 chip.macs2_signal_track_pooled -3539355212675485255 BW FC -4775905216146785996->-3539355212675485255 4641287298181399743 BW p-val -4775905216146785996->4641287298181399743 -3572662136753267256 chip.call_peak_pooled 1966798929444487464 Peak (bfilt) -3572662136753267256->1966798929444487464 -1548025679804553393 Peak -3572662136753267256->-1548025679804553393 8361622790493844756 chip.idr_ppr -1548025679804553393->8361622790493844756 -6042123108351152279 chip.idr -1548025679804553393->-6042123108351152279 -3893840872567933197 chip.overlap -1548025679804553393->-3893840872567933197 7655274374599762697 chip.overlap_ppr -1548025679804553393->7655274374599762697 -587345582175895985 chip.pool_ta 7908317925320483094 TAG-ALIGN -587345582175895985->7908317925320483094 7908317925320483094->-4775905216146785996 7908317925320483094->-3572662136753267256 7908317925320483094->8361622790493844756 7908317925320483094->-6042123108351152279 7908317925320483094->-3893840872567933197 7908317925320483094->7655274374599762697 -5168008042600556960 chip.call_peak 2707881375192228214 Peak (bfilt) -5168008042600556960->2707881375192228214 -968776190763217107 Peak -5168008042600556960->-968776190763217107 -968776190763217107->-6042123108351152279 -968776190763217107->-3893840872567933197 6600580091846235843 chip.reproducibility_overlap -968776190763217107->6600580091846235843 2547650371200049761 chip.reproducibility_idr -968776190763217107->2547650371200049761 -4943001548815673564 chip.bam2ta -2508138543444683978 TAG-ALIGN -4943001548815673564->-2508138543444683978 -2508138543444683978->-587345582175895985 -2508138543444683978->-5168008042600556960 -3184145615556943303 chip.macs2_signal_track -2508138543444683978->-3184145615556943303 -2508138543444683978->8361622790493844756 -2508138543444683978->6600580091846235843 -2508138543444683978->2547650371200049761 -2508138543444683978->7655274374599762697 5000625461932580939 chip.filter 5505055355611548974 SAMstats QC 5000625461932580939->5505055355611548974 -5781030200272316383 Filt/deduped BAM 5000625461932580939->-5781030200272316383 8011571254468910569 LibCmplx QC 5000625461932580939->8011571254468910569 -5781030200272316383->-4943001548815673564 8128959977540121062 chip.jsd -5781030200272316383->8128959977540121062 -4775081766525311535 chip.align 4176573685677576358 SAMstats QC -4775081766525311535->4176573685677576358 -3268033396407034817 BAM -4775081766525311535->-3268033396407034817 -3268033396407034817->5000625461932580939 -5005781901138846210 chip.xcor 6344868385495008294 XCOR Plot -5005781901138846210->6344868385495008294 -3512259562389719896 BW FC -3184145615556943303->-3512259562389719896 9167838948213074732 BW p-val -3184145615556943303->9167838948213074732 -171956265231422949 FASTQ R1 (1) -171956265231422949->-4775081766525311535 -171956265231422949->-5005781901138846210 4304692237406185086 FASTQ R2 (1) 4304692237406185086->-4775081766525311535 5930591562177670108 chip.call_peak 2195193012149273271 Peak (bfilt) 5930591562177670108->2195193012149273271 -869041619180842547 Peak 5930591562177670108->-869041619180842547 -869041619180842547->-6042123108351152279 -869041619180842547->-3893840872567933197 -869041619180842547->6600580091846235843 -869041619180842547->2547650371200049761 263405302330111506 chip.bam2ta -2828674519695254481 TAG-ALIGN 263405302330111506->-2828674519695254481 -2828674519695254481->-587345582175895985 -2828674519695254481->5930591562177670108 -9018514119556123822 chip.macs2_signal_track -2828674519695254481->-9018514119556123822 -2828674519695254481->8361622790493844756 -2828674519695254481->6600580091846235843 -2828674519695254481->2547650371200049761 -2828674519695254481->7655274374599762697 8315772212482267986 chip.filter 4085478645746776347 SAMstats QC 8315772212482267986->4085478645746776347 -7495973006241222329 Filt/deduped BAM 8315772212482267986->-7495973006241222329 -6698679832996559791 LibCmplx QC 8315772212482267986->-6698679832996559791 -7495973006241222329->263405302330111506 -7495973006241222329->8128959977540121062 169776922099982327 chip.align 6114861040088032895 SAMstats QC 169776922099982327->6114861040088032895 -2210993602448975463 BAM 169776922099982327->-2210993602448975463 -2210993602448975463->8315772212482267986 -5541004209020859255 chip.xcor -8179233589394217652 XCOR Plot -5541004209020859255->-8179233589394217652 5401293299706908328 BW FC -9018514119556123822->5401293299706908328 1259660923781737619 BW p-val -9018514119556123822->1259660923781737619 149016678726790900 FASTQ R1 (1) 149016678726790900->169776922099982327 149016678726790900->-5541004209020859255 -222665901418557196 FASTQ R2 (1) -222665901418557196->169776922099982327 8964852680209132806 chip.pool_ta_ctl 9017313027080817723 TAG-ALIGN 8964852680209132806->9017313027080817723 9017313027080817723->-4775905216146785996 9017313027080817723->-3572662136753267256 9017313027080817723->-5168008042600556960 9017313027080817723->-3184145615556943303 9017313027080817723->5930591562177670108 9017313027080817723->-9018514119556123822 9017313027080817723->8361622790493844756 9017313027080817723->6600580091846235843 9017313027080817723->2547650371200049761 9017313027080817723->7655274374599762697 -4081028276627791069 chip.bam2ta_ctl 3754494738120041919 TAG-ALIGN -4081028276627791069->3754494738120041919 3754494738120041919->8964852680209132806 -4827237379183326350 Filt/deduped BAM -4827237379183326350->-4081028276627791069 -4827237379183326350->8128959977540121062 5081343590150928393 chip.bam2ta_ctl -437682904000408241 TAG-ALIGN 5081343590150928393->-437682904000408241 -437682904000408241->8964852680209132806 4993936220495735367 Filt/deduped BAM 4993936220495735367->5081343590150928393 4993936220495735367->8128959977540121062 6391241116471997067 chip.bam2ta_ctl 5043519571702509796 TAG-ALIGN 6391241116471997067->5043519571702509796 5043519571702509796->8964852680209132806 -7057316063101980555 Filt/deduped BAM -7057316063101980555->6391241116471997067 -7057316063101980555->8128959977540121062 9154858642046192856 chip.bam2ta_ctl 7446641351503584210 TAG-ALIGN 9154858642046192856->7446641351503584210 7446641351503584210->8964852680209132806 -5004004678320323253 Filt/deduped BAM -5004004678320323253->9154858642046192856 -5004004678320323253->8128959977540121062 1865469813886106218 chip.bam2ta_ctl 600820021656495604 TAG-ALIGN 1865469813886106218->600820021656495604 600820021656495604->8964852680209132806 6250168295545674538 Filt/deduped BAM 6250168295545674538->1865469813886106218 6250168295545674538->8128959977540121062 -8312137706382465135 chip.bam2ta_ctl 4849780535885267971 TAG-ALIGN -8312137706382465135->4849780535885267971 4849780535885267971->8964852680209132806 4874265955314983535 Filt/deduped BAM 4874265955314983535->-8312137706382465135 4874265955314983535->8128959977540121062 -8291599091634904503 IDR Plot ppr 8361622790493844756->-8291599091634904503 -7110920330811081150 IDR Peak ppr 8361622790493844756->-7110920330811081150 -7110920330811081150->2547650371200049761 -5678667521900241540 IDR Plot rep1_vs_rep2 -6042123108351152279->-5678667521900241540 -6251016497878601157 IDR NPeak rep1_vs_rep2 -6042123108351152279->-6251016497878601157 -6251016497878601157->2547650371200049761 -6078388396387656101 Overlap Peak rep1_vs_rep2 -3893840872567933197->-6078388396387656101 -6078388396387656101->6600580091846235843 -861507471823552326 Overlap Peak optimal 6600580091846235843->-861507471823552326 2483784203126211122 Overlap reproducibility 6600580091846235843->2483784203126211122 3412016176985606567 IDR Peak optimal 2547650371200049761->3412016176985606567 -2635941167922977743 IDR reproducibility 2547650371200049761->-2635941167922977743 8614027250629180378 Overlap Peak ppr 7655274374599762697->8614027250629180378 8614027250629180378->6600580091846235843 8894802813774598494 JSD Plot 8128959977540121062->8894802813774598494

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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