File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF331FYR.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF331FYR.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF331FYR.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF331FYR.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF331FYR.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF655ROQ.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF655ROQ.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF655ROQ.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF655ROQ.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF655ROQ.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF331FYR.crop_101-2bp.nodup.pr1_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF331FYR.crop_101-2bp.nodup.pr1_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF331FYR.crop_101-2bp.nodup.pr1_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF331FYR.crop_101-2bp.nodup.pr1_x_ctl.pooled.451M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF331FYR.crop_101-2bp.nodup.pr2_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF331FYR.crop_101-2bp.nodup.pr2_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF331FYR.crop_101-2bp.nodup.pr2_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF331FYR.crop_101-2bp.nodup.pr2_x_ctl.pooled.451M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF331FYR.crop_101-2bp.nodup_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF331FYR.crop_101-2bp.nodup_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF331FYR.crop_101-2bp.nodup_x_ctl.pooled.451M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF331FYR.crop_101-2bp.nodup_x_ctl.pooled.451M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF655ROQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF655ROQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF655ROQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF655ROQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF655ROQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF655ROQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF655ROQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF655ROQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF655ROQ.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF655ROQ.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF655ROQ.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF655ROQ.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF331FYR.crop_101-2bp.nodup.pr1_x_ctl.pooled.451M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF331FYR.crop_101-2bp.nodup.pr2_x_ctl.pooled.451M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF331FYR.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF331FYR.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF331FYR.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF331FYR.crop_101-2bp.nodup_x_ctl.pooled.451M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF331FYR.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF331FYR.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF331FYR.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF655ROQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF655ROQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF655ROQ.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF655ROQ.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF655ROQ.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF655ROQ.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF655ROQ.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF655ROQ.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF655ROQ.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF331FYR.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/f1c39e33-d229-4c20-aab7-e025f22eb238/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF331FYR.crop_101-2bp.nodup_x_ctl.pooled.451M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF331FYR.crop_101-2bp.nodup_x_ctl.pooled.451M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF655ROQ.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/f66d3a15-cfc6-4c5c-a5d2-9e9b063f2456/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF655ROQ.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 3018992300510643734 chip.macs2_signal_track_pooled -7338708836304723857 BW FC 3018992300510643734->-7338708836304723857 6007362673568556735 BW p-val 3018992300510643734->6007362673568556735 -7896095413510710308 chip.call_peak_pooled 2160998996557437658 Peak (bfilt) -7896095413510710308->2160998996557437658 6146694467221549112 Peak -7896095413510710308->6146694467221549112 5653958320318898838 chip.idr_ppr 6146694467221549112->5653958320318898838 8491643341348239949 chip.idr 6146694467221549112->8491643341348239949 -4480639698235706799 chip.overlap 6146694467221549112->-4480639698235706799 -1838086681191514526 chip.overlap_ppr 6146694467221549112->-1838086681191514526 -2909421695983207652 chip.pool_ta -2911744042785354522 TAG-ALIGN -2909421695983207652->-2911744042785354522 -2911744042785354522->3018992300510643734 -2911744042785354522->-7896095413510710308 -2911744042785354522->5653958320318898838 -2911744042785354522->8491643341348239949 -2911744042785354522->-4480639698235706799 -2911744042785354522->-1838086681191514526 8503395091294990622 chip.call_peak -7129857814870039217 Peak (bfilt) 8503395091294990622->-7129857814870039217 2095215032151332315 Peak 8503395091294990622->2095215032151332315 2095215032151332315->8491643341348239949 2095215032151332315->-4480639698235706799 -4733872099227203572 chip.reproducibility_overlap 2095215032151332315->-4733872099227203572 -6132898419028100194 chip.reproducibility_idr 2095215032151332315->-6132898419028100194 869682520509941177 chip.bam2ta -6082536808408860440 TAG-ALIGN 869682520509941177->-6082536808408860440 -6082536808408860440->-2909421695983207652 -6082536808408860440->8503395091294990622 -911869082865844994 chip.macs2_signal_track -6082536808408860440->-911869082865844994 -6082536808408860440->5653958320318898838 -6082536808408860440->-4733872099227203572 -6082536808408860440->-6132898419028100194 -6082536808408860440->-1838086681191514526 8562337161488658236 chip.filter 6084586197932138504 SAMstats QC 8562337161488658236->6084586197932138504 2239345528569223069 Filt/deduped BAM 8562337161488658236->2239345528569223069 5087181775966356876 LibCmplx QC 8562337161488658236->5087181775966356876 2239345528569223069->869682520509941177 2585773308685263561 chip.jsd 2239345528569223069->2585773308685263561 6116989997060695210 chip.align 9195463376907520616 SAMstats QC 6116989997060695210->9195463376907520616 1685365989152059017 BAM 6116989997060695210->1685365989152059017 1685365989152059017->8562337161488658236 7763169599509323511 chip.xcor 5711045232532919439 XCOR Plot 7763169599509323511->5711045232532919439 -6798635079110477176 BW FC -911869082865844994->-6798635079110477176 -6874094959463851183 BW p-val -911869082865844994->-6874094959463851183 -7127741537888794179 FASTQ R1 (1) -7127741537888794179->6116989997060695210 -7127741537888794179->7763169599509323511 995056770278346157 FASTQ R2 (1) 995056770278346157->6116989997060695210 -3178801182526299916 chip.call_peak -4729535954762323164 Peak (bfilt) -3178801182526299916->-4729535954762323164 6275440008837613900 Peak -3178801182526299916->6275440008837613900 6275440008837613900->8491643341348239949 6275440008837613900->-4480639698235706799 6275440008837613900->-4733872099227203572 6275440008837613900->-6132898419028100194 -4890717384215080874 chip.bam2ta -5900174643569270313 TAG-ALIGN -4890717384215080874->-5900174643569270313 -5900174643569270313->-2909421695983207652 -5900174643569270313->-3178801182526299916 2210107400027720135 chip.macs2_signal_track -5900174643569270313->2210107400027720135 -5900174643569270313->5653958320318898838 -5900174643569270313->-4733872099227203572 -5900174643569270313->-6132898419028100194 -5900174643569270313->-1838086681191514526 -2954418632193303244 chip.filter 899687333772351817 SAMstats QC -2954418632193303244->899687333772351817 -6267393458593520744 Filt/deduped BAM -2954418632193303244->-6267393458593520744 -2780794166999331887 LibCmplx QC -2954418632193303244->-2780794166999331887 -6267393458593520744->-4890717384215080874 -6267393458593520744->2585773308685263561 -1166696900714595310 chip.align 2679152662758241081 SAMstats QC -1166696900714595310->2679152662758241081 2125208158502718499 BAM -1166696900714595310->2125208158502718499 2125208158502718499->-2954418632193303244 -5075212272791254732 chip.xcor -1441332486134738482 XCOR Plot -5075212272791254732->-1441332486134738482 2229785988391635146 BW FC 2210107400027720135->2229785988391635146 -701754004203349455 BW p-val 2210107400027720135->-701754004203349455 6186665237182475760 FASTQ R1 (1) 6186665237182475760->-1166696900714595310 6186665237182475760->-5075212272791254732 3059473733539327599 FASTQ R2 (1) 3059473733539327599->-1166696900714595310 -1853628949982212315 chip.pool_ta_ctl 7512121949767507060 TAG-ALIGN -1853628949982212315->7512121949767507060 7512121949767507060->3018992300510643734 7512121949767507060->-7896095413510710308 7512121949767507060->8503395091294990622 7512121949767507060->-911869082865844994 7512121949767507060->-3178801182526299916 7512121949767507060->2210107400027720135 7512121949767507060->5653958320318898838 7512121949767507060->-4733872099227203572 7512121949767507060->-6132898419028100194 7512121949767507060->-1838086681191514526 -5563921801238622438 chip.bam2ta_ctl 6287967214503700889 TAG-ALIGN -5563921801238622438->6287967214503700889 6287967214503700889->-1853628949982212315 1472171215883463784 Filt/deduped BAM 1472171215883463784->-5563921801238622438 1472171215883463784->2585773308685263561 -5494762373799246778 chip.bam2ta_ctl 8799616058097039516 TAG-ALIGN -5494762373799246778->8799616058097039516 8799616058097039516->-1853628949982212315 -5664421187185822204 Filt/deduped BAM -5664421187185822204->-5494762373799246778 -5664421187185822204->2585773308685263561 -9039170502592326925 chip.bam2ta_ctl 1311662730817252682 TAG-ALIGN -9039170502592326925->1311662730817252682 1311662730817252682->-1853628949982212315 -6801333584117636074 Filt/deduped BAM -6801333584117636074->-9039170502592326925 -6801333584117636074->2585773308685263561 -4208538087686559591 chip.bam2ta_ctl 1332385461668165280 TAG-ALIGN -4208538087686559591->1332385461668165280 1332385461668165280->-1853628949982212315 3361466088860831985 Filt/deduped BAM 3361466088860831985->-4208538087686559591 3361466088860831985->2585773308685263561 7483783723460682920 chip.bam2ta_ctl -4413382030110987564 TAG-ALIGN 7483783723460682920->-4413382030110987564 -4413382030110987564->-1853628949982212315 8368342588511977821 Filt/deduped BAM 8368342588511977821->7483783723460682920 8368342588511977821->2585773308685263561 5795329733942089579 chip.bam2ta_ctl -3460742300598413937 TAG-ALIGN 5795329733942089579->-3460742300598413937 -3460742300598413937->-1853628949982212315 -8265871398339893748 Filt/deduped BAM -8265871398339893748->5795329733942089579 -8265871398339893748->2585773308685263561 -3075524494448021026 IDR Plot ppr 5653958320318898838->-3075524494448021026 -4102554524310239932 IDR Peak ppr 5653958320318898838->-4102554524310239932 -4102554524310239932->-6132898419028100194 5204619617760352768 IDR Plot rep1_vs_rep2 8491643341348239949->5204619617760352768 -8457826751155209328 IDR NPeak rep1_vs_rep2 8491643341348239949->-8457826751155209328 -8457826751155209328->-6132898419028100194 -5991514462331776618 Overlap Peak rep1_vs_rep2 -4480639698235706799->-5991514462331776618 -5991514462331776618->-4733872099227203572 7666344997209269524 Overlap Peak optimal -4733872099227203572->7666344997209269524 -4967222887683635665 Overlap reproducibility -4733872099227203572->-4967222887683635665 -5441595087625968149 IDR Peak optimal -6132898419028100194->-5441595087625968149 1579085409366862232 IDR reproducibility -6132898419028100194->1579085409366862232 -8962677589138891517 Overlap Peak ppr -1838086681191514526->-8962677589138891517 -8962677589138891517->-4733872099227203572 -7690512159276002688 JSD Plot 2585773308685263561->-7690512159276002688

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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