File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF585IQN.tagAlign.gz
Control 10
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-9/glob-199637d3015dccbe277f621a18be9eb4/ENCFF919EDN.tagAlign.gz
Control 11
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-10/glob-199637d3015dccbe277f621a18be9eb4/ENCFF489ERC.tagAlign.gz
Control 12
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-11/glob-199637d3015dccbe277f621a18be9eb4/ENCFF533HJT.tagAlign.gz
Control 13
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-12/glob-199637d3015dccbe277f621a18be9eb4/ENCFF451CVJ.tagAlign.gz
Control 14
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-13/glob-199637d3015dccbe277f621a18be9eb4/ENCFF383QIP.tagAlign.gz
Control 15
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-14/glob-199637d3015dccbe277f621a18be9eb4/ENCFF905YEA.tagAlign.gz
Control 16
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-15/glob-199637d3015dccbe277f621a18be9eb4/ENCFF785BTW.tagAlign.gz
Control 17
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-16/glob-199637d3015dccbe277f621a18be9eb4/ENCFF709TVD.tagAlign.gz
Control 18
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-17/glob-199637d3015dccbe277f621a18be9eb4/ENCFF928CJD.tagAlign.gz
Control 19
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-18/glob-199637d3015dccbe277f621a18be9eb4/ENCFF528DFI.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF847EHD.tagAlign.gz
Control 20
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-19/glob-199637d3015dccbe277f621a18be9eb4/ENCFF482RWP.tagAlign.gz
Control 21
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-20/glob-199637d3015dccbe277f621a18be9eb4/ENCFF736OSY.tagAlign.gz
Control 22
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-21/glob-199637d3015dccbe277f621a18be9eb4/ENCFF490JCT.tagAlign.gz
Control 23
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-22/glob-199637d3015dccbe277f621a18be9eb4/ENCFF856XMU.tagAlign.gz
Control 24
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-23/glob-199637d3015dccbe277f621a18be9eb4/ENCFF949NGG.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF800IMV.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF190AZK.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF500XPF.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF654JHZ.tagAlign.gz
Control 7
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-6/glob-199637d3015dccbe277f621a18be9eb4/ENCFF065LBX.tagAlign.gz
Control 8
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-7/glob-199637d3015dccbe277f621a18be9eb4/ENCFF425NTG.tagAlign.gz
Control 9
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-8/glob-199637d3015dccbe277f621a18be9eb4/ENCFF705BZZ.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF268FKS.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF268FKS.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF268FKS.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF268FKS.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF268FKS.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF237ACY.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF237ACY.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF237ACY.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF237ACY.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF237ACY.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.606M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.606M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.606M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.606M.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF268FKS.crop_101-2bp.nodup.pr1_x_ctl.pooled.281M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF268FKS.crop_101-2bp.nodup.pr1_x_ctl.pooled.281M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF268FKS.crop_101-2bp.nodup.pr1_x_ctl.pooled.281M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF268FKS.crop_101-2bp.nodup.pr1_x_ctl.pooled.281M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF268FKS.crop_101-2bp.nodup.pr2_x_ctl.pooled.281M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF268FKS.crop_101-2bp.nodup.pr2_x_ctl.pooled.281M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF268FKS.crop_101-2bp.nodup.pr2_x_ctl.pooled.281M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF268FKS.crop_101-2bp.nodup.pr2_x_ctl.pooled.281M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF268FKS.crop_101-2bp.nodup_x_ctl.pooled.281M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF268FKS.crop_101-2bp.nodup_x_ctl.pooled.281M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF268FKS.crop_101-2bp.nodup_x_ctl.pooled.281M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF268FKS.crop_101-2bp.nodup_x_ctl.pooled.281M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF237ACY.crop_101-2bp.nodup.pr1_x_ctl.pooled.325M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF237ACY.crop_101-2bp.nodup.pr1_x_ctl.pooled.325M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF237ACY.crop_101-2bp.nodup.pr1_x_ctl.pooled.325M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF237ACY.crop_101-2bp.nodup.pr1_x_ctl.pooled.325M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF237ACY.crop_101-2bp.nodup.pr2_x_ctl.pooled.325M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF237ACY.crop_101-2bp.nodup.pr2_x_ctl.pooled.325M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF237ACY.crop_101-2bp.nodup.pr2_x_ctl.pooled.325M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF237ACY.crop_101-2bp.nodup.pr2_x_ctl.pooled.325M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF237ACY.crop_101-2bp.nodup_x_ctl.pooled.325M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF237ACY.crop_101-2bp.nodup_x_ctl.pooled.325M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF237ACY.crop_101-2bp.nodup_x_ctl.pooled.325M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF237ACY.crop_101-2bp.nodup_x_ctl.pooled.325M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.606M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.606M.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.606M.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF268FKS.crop_101-2bp.nodup.pr1_x_ctl.pooled.281M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF268FKS.crop_101-2bp.nodup.pr2_x_ctl.pooled.281M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF268FKS.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF268FKS.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF268FKS.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF268FKS.crop_101-2bp.nodup_x_ctl.pooled.281M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF268FKS.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF268FKS.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF268FKS.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF237ACY.crop_101-2bp.nodup.pr1_x_ctl.pooled.325M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF237ACY.crop_101-2bp.nodup.pr2_x_ctl.pooled.325M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF237ACY.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF237ACY.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF237ACY.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF237ACY.crop_101-2bp.nodup_x_ctl.pooled.325M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF237ACY.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF237ACY.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF237ACY.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF268FKS.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.606M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.606M.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF268FKS.crop_101-2bp.nodup_x_ctl.pooled.281M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF268FKS.crop_101-2bp.nodup_x_ctl.pooled.281M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF237ACY.crop_101-2bp.nodup_x_ctl.pooled.325M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/c20add7e-2039-4768-9459-4ffbdd164fce/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF237ACY.crop_101-2bp.nodup_x_ctl.pooled.325M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 cluster_ctl7 Control 7 cluster_ctl8 Control 8 cluster_ctl9 Control 9 cluster_ctl10 Control 10 cluster_ctl11 cluster_ctl12 cluster_ctl13 cluster_ctl14 cluster_ctl15 cluster_ctl16 cluster_ctl17 cluster_ctl18 cluster_ctl19 cluster_ctl20 cluster_ctl21 cluster_ctl22 cluster_ctl23 cluster_ctl24 964317769213467507 chip.macs2_signal_track_pooled 6241315288405862319 BW FC 964317769213467507->6241315288405862319 -1205480126433396254 BW p-val 964317769213467507->-1205480126433396254 -2639964439413494867 chip.call_peak_pooled -1702512492035919365 Peak (bfilt) -2639964439413494867->-1702512492035919365 2267112391114583275 Peak -2639964439413494867->2267112391114583275 3589932244545385997 chip.idr_ppr 2267112391114583275->3589932244545385997 -6245846582388951685 chip.idr 2267112391114583275->-6245846582388951685 -3873912169040484764 chip.overlap 2267112391114583275->-3873912169040484764 3893874749835000317 chip.overlap_ppr 2267112391114583275->3893874749835000317 -5413723652847731043 chip.pool_ta 3712941449362129046 TAG-ALIGN -5413723652847731043->3712941449362129046 3712941449362129046->964317769213467507 3712941449362129046->-2639964439413494867 3712941449362129046->3589932244545385997 3712941449362129046->-6245846582388951685 3712941449362129046->-3873912169040484764 3712941449362129046->3893874749835000317 8349659355633022722 chip.call_peak -1782644427733148790 Peak (bfilt) 8349659355633022722->-1782644427733148790 1420854421655594872 Peak 8349659355633022722->1420854421655594872 1420854421655594872->-6245846582388951685 1420854421655594872->-3873912169040484764 4911721625068528211 chip.reproducibility_overlap 1420854421655594872->4911721625068528211 7156082641804393402 chip.reproducibility_idr 1420854421655594872->7156082641804393402 6173754757497383820 chip.bam2ta -3540533396428159349 TAG-ALIGN 6173754757497383820->-3540533396428159349 -3540533396428159349->-5413723652847731043 -3540533396428159349->8349659355633022722 -2851061585302817159 chip.macs2_signal_track -3540533396428159349->-2851061585302817159 -3540533396428159349->3589932244545385997 -3540533396428159349->4911721625068528211 -3540533396428159349->7156082641804393402 -3540533396428159349->3893874749835000317 3497187583047561140 chip.filter 8898195953821317218 SAMstats QC 3497187583047561140->8898195953821317218 -2059242306956738221 Filt/deduped BAM 3497187583047561140->-2059242306956738221 -7910442129050949984 LibCmplx QC 3497187583047561140->-7910442129050949984 -2059242306956738221->6173754757497383820 8283172347233949044 chip.jsd -2059242306956738221->8283172347233949044 9223170825308424283 chip.align 3177701016452087848 SAMstats QC 9223170825308424283->3177701016452087848 412842029917844072 BAM 9223170825308424283->412842029917844072 412842029917844072->3497187583047561140 -6120398285622141554 chip.xcor -2135965364982764593 XCOR Plot -6120398285622141554->-2135965364982764593 5648848567922946734 BW FC -2851061585302817159->5648848567922946734 -6570596268514750904 BW p-val -2851061585302817159->-6570596268514750904 -5669847471428688204 FASTQ R1 (1) -5669847471428688204->9223170825308424283 -5669847471428688204->-6120398285622141554 -1839229967452484265 FASTQ R2 (1) -1839229967452484265->9223170825308424283 6353567533404210536 chip.call_peak -9070412858410674811 Peak (bfilt) 6353567533404210536->-9070412858410674811 -7521986279825903619 Peak 6353567533404210536->-7521986279825903619 -7521986279825903619->-6245846582388951685 -7521986279825903619->-3873912169040484764 -7521986279825903619->4911721625068528211 -7521986279825903619->7156082641804393402 -5922528606351259989 chip.bam2ta -5118695489043397292 TAG-ALIGN -5922528606351259989->-5118695489043397292 -5118695489043397292->-5413723652847731043 -5118695489043397292->6353567533404210536 -597011308684859320 chip.macs2_signal_track -5118695489043397292->-597011308684859320 -5118695489043397292->3589932244545385997 -5118695489043397292->4911721625068528211 -5118695489043397292->7156082641804393402 -5118695489043397292->3893874749835000317 1771562925517925123 chip.filter -8972771113937360047 SAMstats QC 1771562925517925123->-8972771113937360047 714609707922791942 Filt/deduped BAM 1771562925517925123->714609707922791942 4138999751047474856 LibCmplx QC 1771562925517925123->4138999751047474856 714609707922791942->-5922528606351259989 714609707922791942->8283172347233949044 7544542507031829989 chip.align 3444893623746878515 SAMstats QC 7544542507031829989->3444893623746878515 -4827949414986426587 BAM 7544542507031829989->-4827949414986426587 -4827949414986426587->1771562925517925123 2150327429165656955 chip.xcor 2512331815711444802 XCOR Plot 2150327429165656955->2512331815711444802 3820739348273452561 BW FC -597011308684859320->3820739348273452561 3170181437647728789 BW p-val -597011308684859320->3170181437647728789 -9034150767126698074 FASTQ R1 (1) -9034150767126698074->7544542507031829989 -9034150767126698074->2150327429165656955 8473489310909269541 FASTQ R2 (1) 8473489310909269541->7544542507031829989 -3716951796800318945 chip.pool_ta_ctl -2208037481591874435 TAG-ALIGN -3716951796800318945->-2208037481591874435 -2208037481591874435->964317769213467507 -2208037481591874435->-2639964439413494867 -2208037481591874435->8349659355633022722 -2208037481591874435->-2851061585302817159 -2208037481591874435->6353567533404210536 -2208037481591874435->-597011308684859320 -2208037481591874435->3589932244545385997 -2208037481591874435->4911721625068528211 -2208037481591874435->7156082641804393402 -2208037481591874435->3893874749835000317 3150706284878784130 chip.bam2ta_ctl 9048055142990131218 TAG-ALIGN 3150706284878784130->9048055142990131218 9048055142990131218->-3716951796800318945 -3369176439886084640 Filt/deduped BAM -3369176439886084640->3150706284878784130 -3369176439886084640->8283172347233949044 -6522185504592513071 chip.bam2ta_ctl 5106443808654584853 TAG-ALIGN -6522185504592513071->5106443808654584853 5106443808654584853->-3716951796800318945 -8787903090303276271 Filt/deduped BAM -8787903090303276271->-6522185504592513071 -8787903090303276271->8283172347233949044 -3517549021471901376 chip.bam2ta_ctl -3969264021461866335 TAG-ALIGN -3517549021471901376->-3969264021461866335 -3969264021461866335->-3716951796800318945 -4597761863664056143 Filt/deduped BAM -4597761863664056143->-3517549021471901376 -4597761863664056143->8283172347233949044 -3525806531737281340 chip.bam2ta_ctl 4068426812517320268 TAG-ALIGN -3525806531737281340->4068426812517320268 4068426812517320268->-3716951796800318945 6643480097088519121 Filt/deduped BAM 6643480097088519121->-3525806531737281340 6643480097088519121->8283172347233949044 8041680222567802790 chip.bam2ta_ctl 8336266551263966262 TAG-ALIGN 8041680222567802790->8336266551263966262 8336266551263966262->-3716951796800318945 -558150208663408140 Filt/deduped BAM -558150208663408140->8041680222567802790 -558150208663408140->8283172347233949044 -4722729562713732175 chip.bam2ta_ctl -5246949909379648029 TAG-ALIGN -4722729562713732175->-5246949909379648029 -5246949909379648029->-3716951796800318945 1719656094928947163 Filt/deduped BAM 1719656094928947163->-4722729562713732175 1719656094928947163->8283172347233949044 -7172310991774062717 chip.bam2ta_ctl -1163743438018353936 TAG-ALIGN -7172310991774062717->-1163743438018353936 -1163743438018353936->-3716951796800318945 7331484483944463981 Filt/deduped BAM 7331484483944463981->-7172310991774062717 7331484483944463981->8283172347233949044 -3879974351962645909 chip.bam2ta_ctl 528309133327782316 TAG-ALIGN -3879974351962645909->528309133327782316 528309133327782316->-3716951796800318945 -7421595080197791398 Filt/deduped BAM -7421595080197791398->-3879974351962645909 -7421595080197791398->8283172347233949044 -2064740699897643677 chip.bam2ta_ctl 6971827125535188956 TAG-ALIGN -2064740699897643677->6971827125535188956 6971827125535188956->-3716951796800318945 116075008665221791 Filt/deduped BAM 116075008665221791->-2064740699897643677 116075008665221791->8283172347233949044 6732409810026271744 chip.bam2ta_ctl 2181207566507512561 TAG-ALIGN 6732409810026271744->2181207566507512561 2181207566507512561->-3716951796800318945 6561928542137369896 Filt/deduped BAM 6561928542137369896->6732409810026271744 6561928542137369896->8283172347233949044 -6739942002424127600 chip.bam2ta_ctl -6740759140021537584 TAG-ALIGN -6739942002424127600->-6740759140021537584 -6740759140021537584->-3716951796800318945 5431777976251638010 Filt/deduped BAM 5431777976251638010->-6739942002424127600 5431777976251638010->8283172347233949044 9033640150811385772 chip.bam2ta_ctl 4103534843690321269 TAG-ALIGN 9033640150811385772->4103534843690321269 4103534843690321269->-3716951796800318945 -5359914541823767618 Filt/deduped BAM -5359914541823767618->9033640150811385772 -5359914541823767618->8283172347233949044 6852943758008451196 chip.bam2ta_ctl 583792779158554489 TAG-ALIGN 6852943758008451196->583792779158554489 583792779158554489->-3716951796800318945 6656962558692521475 Filt/deduped BAM 6656962558692521475->6852943758008451196 6656962558692521475->8283172347233949044 -9055764025933566729 chip.bam2ta_ctl 7039897868774568975 TAG-ALIGN -9055764025933566729->7039897868774568975 7039897868774568975->-3716951796800318945 -8916752884305603079 Filt/deduped BAM -8916752884305603079->-9055764025933566729 -8916752884305603079->8283172347233949044 -6517159524748168157 chip.bam2ta_ctl 2373099885840875856 TAG-ALIGN -6517159524748168157->2373099885840875856 2373099885840875856->-3716951796800318945 9101072166433227317 Filt/deduped BAM 9101072166433227317->-6517159524748168157 9101072166433227317->8283172347233949044 -3683736827903416260 chip.bam2ta_ctl 8655733860020446670 TAG-ALIGN -3683736827903416260->8655733860020446670 8655733860020446670->-3716951796800318945 8532207644960172159 Filt/deduped BAM 8532207644960172159->-3683736827903416260 8532207644960172159->8283172347233949044 -1953251250540939504 chip.bam2ta_ctl -8869657467484022606 TAG-ALIGN -1953251250540939504->-8869657467484022606 -8869657467484022606->-3716951796800318945 5683216116954445442 Filt/deduped BAM 5683216116954445442->-1953251250540939504 5683216116954445442->8283172347233949044 -427098804424016254 chip.bam2ta_ctl -6733411697739974407 TAG-ALIGN -427098804424016254->-6733411697739974407 -6733411697739974407->-3716951796800318945 915045986854193226 Filt/deduped BAM 915045986854193226->-427098804424016254 915045986854193226->8283172347233949044 3206606507584024404 chip.bam2ta_ctl 1695722139462697229 TAG-ALIGN 3206606507584024404->1695722139462697229 1695722139462697229->-3716951796800318945 -8033632139024025647 Filt/deduped BAM -8033632139024025647->3206606507584024404 -8033632139024025647->8283172347233949044 -1639391648846767032 chip.bam2ta_ctl 2689918736690507238 TAG-ALIGN -1639391648846767032->2689918736690507238 2689918736690507238->-3716951796800318945 -237392846120491545 Filt/deduped BAM -237392846120491545->-1639391648846767032 -237392846120491545->8283172347233949044 3187370327374643194 chip.bam2ta_ctl -1181446908426649387 TAG-ALIGN 3187370327374643194->-1181446908426649387 -1181446908426649387->-3716951796800318945 3908254580984942869 Filt/deduped BAM 3908254580984942869->3187370327374643194 3908254580984942869->8283172347233949044 -4426963967214031032 chip.bam2ta_ctl 6987126360214195067 TAG-ALIGN -4426963967214031032->6987126360214195067 6987126360214195067->-3716951796800318945 -3629400321472421382 Filt/deduped BAM -3629400321472421382->-4426963967214031032 -3629400321472421382->8283172347233949044 -8883872758839439508 chip.bam2ta_ctl 6173744750304364303 TAG-ALIGN -8883872758839439508->6173744750304364303 6173744750304364303->-3716951796800318945 -4640227479018810057 Filt/deduped BAM -4640227479018810057->-8883872758839439508 -4640227479018810057->8283172347233949044 6602207367040491709 chip.bam2ta_ctl 2264452324815046948 TAG-ALIGN 6602207367040491709->2264452324815046948 2264452324815046948->-3716951796800318945 -7248838870798014936 Filt/deduped BAM -7248838870798014936->6602207367040491709 -7248838870798014936->8283172347233949044 -1815458219485840901 IDR Plot ppr 3589932244545385997->-1815458219485840901 3066428822746861518 IDR Peak ppr 3589932244545385997->3066428822746861518 3066428822746861518->7156082641804393402 -5263778522296630883 IDR Plot rep1_vs_rep2 -6245846582388951685->-5263778522296630883 1147308002823413201 IDR NPeak rep1_vs_rep2 -6245846582388951685->1147308002823413201 1147308002823413201->7156082641804393402 -3185044115449641998 Overlap Peak rep1_vs_rep2 -3873912169040484764->-3185044115449641998 -3185044115449641998->4911721625068528211 3538067297785659201 Overlap Peak optimal 4911721625068528211->3538067297785659201 -1879372456334461453 Overlap reproducibility 4911721625068528211->-1879372456334461453 -7892332340333688279 IDR Peak optimal 7156082641804393402->-7892332340333688279 2375982242878202269 IDR reproducibility 7156082641804393402->2375982242878202269 2902740289362320175 Overlap Peak ppr 3893874749835000317->2902740289362320175 2902740289362320175->4911721625068528211 -7484593584054314313 JSD Plot 8283172347233949044->-7484593584054314313

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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