File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF780IGT.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF780IGT.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF780IGT.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF780IGT.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF780IGT.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF109KFS.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF109KFS.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF109KFS.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF109KFS.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF109KFS.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF780IGT.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF780IGT.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF780IGT.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF780IGT.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF780IGT.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF780IGT.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF109KFS.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF109KFS.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF109KFS.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF109KFS.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF109KFS.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF109KFS.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF780IGT.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -6914602214470362597 chip.macs2_signal_track_pooled -5804847047304884536 BW FC -6914602214470362597->-5804847047304884536 -3565137102056833435 BW p-val -6914602214470362597->-3565137102056833435 -6328093304095621103 chip.call_peak_pooled 7277240965340981690 Peak (bfilt) -6328093304095621103->7277240965340981690 9017994638168162904 Peak -6328093304095621103->9017994638168162904 -8103416753249997472 chip.idr_ppr 9017994638168162904->-8103416753249997472 -7318947782753466325 chip.idr 9017994638168162904->-7318947782753466325 1918894981134960259 chip.overlap 9017994638168162904->1918894981134960259 -4333705342440363818 chip.overlap_ppr 9017994638168162904->-4333705342440363818 8802151710942833515 chip.pool_ta -3014223557458868114 TAG-ALIGN 8802151710942833515->-3014223557458868114 -3014223557458868114->-6914602214470362597 -3014223557458868114->-6328093304095621103 -3014223557458868114->-8103416753249997472 -3014223557458868114->-7318947782753466325 -3014223557458868114->1918894981134960259 -3014223557458868114->-4333705342440363818 -3964840933806288968 chip.call_peak -7137643404385369009 Peak (bfilt) -3964840933806288968->-7137643404385369009 8023624792075952247 Peak -3964840933806288968->8023624792075952247 8023624792075952247->-7318947782753466325 8023624792075952247->1918894981134960259 -8756423078878031098 chip.reproducibility_overlap 8023624792075952247->-8756423078878031098 -1454747279195978329 chip.reproducibility_idr 8023624792075952247->-1454747279195978329 3080321017277108810 chip.bam2ta -6092085462954222802 TAG-ALIGN 3080321017277108810->-6092085462954222802 -6092085462954222802->8802151710942833515 -6092085462954222802->-3964840933806288968 -6274140070737572713 chip.macs2_signal_track -6092085462954222802->-6274140070737572713 -6092085462954222802->-8103416753249997472 -6092085462954222802->-8756423078878031098 -6092085462954222802->-1454747279195978329 -6092085462954222802->-4333705342440363818 -3362038394359766243 chip.filter -7143302573369639958 SAMstats QC -3362038394359766243->-7143302573369639958 5851570428100189381 Filt/deduped BAM -3362038394359766243->5851570428100189381 7019288763349840936 LibCmplx QC -3362038394359766243->7019288763349840936 5851570428100189381->3080321017277108810 -7055080076226928643 chip.jsd 5851570428100189381->-7055080076226928643 1336021974301711997 chip.align 7197922289322224856 SAMstats QC 1336021974301711997->7197922289322224856 -4323499661213145504 BAM 1336021974301711997->-4323499661213145504 -4323499661213145504->-3362038394359766243 -5563622374315497341 chip.xcor -3006705423869188554 XCOR Plot -5563622374315497341->-3006705423869188554 5224119595940858424 BW FC -6274140070737572713->5224119595940858424 3897715001381798642 BW p-val -6274140070737572713->3897715001381798642 -448543428572192165 FASTQ R1 (1) -448543428572192165->1336021974301711997 -448543428572192165->-5563622374315497341 5727506044456267057 FASTQ R2 (1) 5727506044456267057->1336021974301711997 5498272081995874303 chip.call_peak -8084828118853817835 Peak (bfilt) 5498272081995874303->-8084828118853817835 7636484691757851401 Peak 5498272081995874303->7636484691757851401 7636484691757851401->-7318947782753466325 7636484691757851401->1918894981134960259 7636484691757851401->-8756423078878031098 7636484691757851401->-1454747279195978329 -895917179345121995 chip.bam2ta 6208712346423734867 TAG-ALIGN -895917179345121995->6208712346423734867 6208712346423734867->8802151710942833515 6208712346423734867->5498272081995874303 3045421287533338198 chip.macs2_signal_track 6208712346423734867->3045421287533338198 6208712346423734867->-8103416753249997472 6208712346423734867->-8756423078878031098 6208712346423734867->-1454747279195978329 6208712346423734867->-4333705342440363818 786312731739951593 chip.filter 1151250784032538439 SAMstats QC 786312731739951593->1151250784032538439 1973742193451203498 Filt/deduped BAM 786312731739951593->1973742193451203498 1451248924267384037 LibCmplx QC 786312731739951593->1451248924267384037 1973742193451203498->-895917179345121995 1973742193451203498->-7055080076226928643 5678417895018320658 chip.align 5820994797622705814 SAMstats QC 5678417895018320658->5820994797622705814 -9106628003665231623 BAM 5678417895018320658->-9106628003665231623 -9106628003665231623->786312731739951593 -7661355272787167665 chip.xcor -2026985498898254219 XCOR Plot -7661355272787167665->-2026985498898254219 -4522002066321550030 BW FC 3045421287533338198->-4522002066321550030 -4875107813474120404 BW p-val 3045421287533338198->-4875107813474120404 -5524369116819215298 FASTQ R1 (1) -5524369116819215298->5678417895018320658 -5524369116819215298->-7661355272787167665 -3922984886242523438 FASTQ R2 (1) -3922984886242523438->5678417895018320658 -725406458607303458 chip.pool_ta_ctl 7531689329581454212 TAG-ALIGN -725406458607303458->7531689329581454212 7531689329581454212->-6914602214470362597 7531689329581454212->-6328093304095621103 7531689329581454212->-3964840933806288968 7531689329581454212->-6274140070737572713 7531689329581454212->5498272081995874303 7531689329581454212->3045421287533338198 7531689329581454212->-8103416753249997472 7531689329581454212->-8756423078878031098 7531689329581454212->-1454747279195978329 7531689329581454212->-4333705342440363818 7365528230106970340 chip.bam2ta_ctl 3931453325680966201 TAG-ALIGN 7365528230106970340->3931453325680966201 3931453325680966201->-725406458607303458 6265907080869914142 Filt/deduped BAM 6265907080869914142->7365528230106970340 6265907080869914142->-7055080076226928643 -8730953955487905938 chip.bam2ta_ctl -5019562510856143606 TAG-ALIGN -8730953955487905938->-5019562510856143606 -5019562510856143606->-725406458607303458 4097642981049887454 Filt/deduped BAM 4097642981049887454->-8730953955487905938 4097642981049887454->-7055080076226928643 2164212253370626109 chip.bam2ta_ctl -6011875587510810602 TAG-ALIGN 2164212253370626109->-6011875587510810602 -6011875587510810602->-725406458607303458 -8028348148131765204 Filt/deduped BAM -8028348148131765204->2164212253370626109 -8028348148131765204->-7055080076226928643 -1776602627064982839 chip.bam2ta_ctl 6841119331295631574 TAG-ALIGN -1776602627064982839->6841119331295631574 6841119331295631574->-725406458607303458 -1517245523208081149 Filt/deduped BAM -1517245523208081149->-1776602627064982839 -1517245523208081149->-7055080076226928643 -5700546316120075950 chip.bam2ta_ctl 1504686423032025595 TAG-ALIGN -5700546316120075950->1504686423032025595 1504686423032025595->-725406458607303458 -7470363276582945094 Filt/deduped BAM -7470363276582945094->-5700546316120075950 -7470363276582945094->-7055080076226928643 5231988855024266811 chip.bam2ta_ctl 3654652133755610598 TAG-ALIGN 5231988855024266811->3654652133755610598 3654652133755610598->-725406458607303458 5235160176658096007 Filt/deduped BAM 5235160176658096007->5231988855024266811 5235160176658096007->-7055080076226928643 -1041456478539578608 IDR Plot ppr -8103416753249997472->-1041456478539578608 3522107738509265891 IDR Peak ppr -8103416753249997472->3522107738509265891 3522107738509265891->-1454747279195978329 8315789106962417075 IDR Plot rep1_vs_rep2 -7318947782753466325->8315789106962417075 -9099332826230397079 IDR NPeak rep1_vs_rep2 -7318947782753466325->-9099332826230397079 -9099332826230397079->-1454747279195978329 -2192926057938573610 Overlap Peak rep1_vs_rep2 1918894981134960259->-2192926057938573610 -2192926057938573610->-8756423078878031098 1904107397415106621 Overlap Peak optimal -8756423078878031098->1904107397415106621 1396508577661868960 Overlap reproducibility -8756423078878031098->1396508577661868960 5578875047554594169 IDR Peak optimal -1454747279195978329->5578875047554594169 4095172624719457800 IDR reproducibility -1454747279195978329->4095172624719457800 3142153548130227481 Overlap Peak ppr -4333705342440363818->3142153548130227481 3142153548130227481->-8756423078878031098 -4179857097469746079 JSD Plot -7055080076226928643->-4179857097469746079

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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