File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF780IGT.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF780IGT.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF780IGT.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF780IGT.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF780IGT.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF109KFS.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF109KFS.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF109KFS.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF109KFS.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF109KFS.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF780IGT.crop_101-2bp.nodup.pr1_x_ctl.pooled.307M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF780IGT.crop_101-2bp.nodup.pr2_x_ctl.pooled.307M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF780IGT.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF780IGT.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF780IGT.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF780IGT.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF780IGT.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF780IGT.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF109KFS.crop_101-2bp.nodup.pr1_x_ctl.pooled.365M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF109KFS.crop_101-2bp.nodup.pr2_x_ctl.pooled.365M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF109KFS.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF109KFS.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF109KFS.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF109KFS.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF109KFS.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF109KFS.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF780IGT.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/9155c648-5fde-458d-b181-ef7b39f46358/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF780IGT.crop_101-2bp.nodup_x_ctl.pooled.307M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/7ef647a8-0fae-41c2-8588-96ea96a8411d/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF109KFS.crop_101-2bp.nodup_x_ctl.pooled.365M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 4124569248680489208 chip.macs2_signal_track_pooled 1297595221951638363 BW FC 4124569248680489208->1297595221951638363 -6423431515209484620 BW p-val 4124569248680489208->-6423431515209484620 3291943933462847935 chip.call_peak_pooled -5209245312743047773 Peak (bfilt) 3291943933462847935->-5209245312743047773 7340260438920062875 Peak 3291943933462847935->7340260438920062875 6188490355673249805 chip.idr_ppr 7340260438920062875->6188490355673249805 6949593375317898142 chip.idr 7340260438920062875->6949593375317898142 1649413690944057068 chip.overlap 7340260438920062875->1649413690944057068 -8584458154728388812 chip.overlap_ppr 7340260438920062875->-8584458154728388812 -3809925774205468145 chip.pool_ta 3074916799723165739 TAG-ALIGN -3809925774205468145->3074916799723165739 3074916799723165739->4124569248680489208 3074916799723165739->3291943933462847935 3074916799723165739->6188490355673249805 3074916799723165739->6949593375317898142 3074916799723165739->1649413690944057068 3074916799723165739->-8584458154728388812 -3457172842495650616 chip.call_peak 7944155042391009332 Peak (bfilt) -3457172842495650616->7944155042391009332 8099053409301565296 Peak -3457172842495650616->8099053409301565296 8099053409301565296->6949593375317898142 8099053409301565296->1649413690944057068 5518176756675810195 chip.reproducibility_overlap 8099053409301565296->5518176756675810195 7612734309475616483 chip.reproducibility_idr 8099053409301565296->7612734309475616483 3880905375907283318 chip.bam2ta 559532280682418950 TAG-ALIGN 3880905375907283318->559532280682418950 559532280682418950->-3809925774205468145 559532280682418950->-3457172842495650616 5359685597130819044 chip.macs2_signal_track 559532280682418950->5359685597130819044 559532280682418950->6188490355673249805 559532280682418950->5518176756675810195 559532280682418950->7612734309475616483 559532280682418950->-8584458154728388812 8642356871089092535 chip.filter 4610949567045414214 SAMstats QC 8642356871089092535->4610949567045414214 -1887847079823803806 Filt/deduped BAM 8642356871089092535->-1887847079823803806 -8271289475942809871 LibCmplx QC 8642356871089092535->-8271289475942809871 -1887847079823803806->3880905375907283318 -3353109092591786490 chip.jsd -1887847079823803806->-3353109092591786490 3587988164791411175 chip.align -853781601995026508 SAMstats QC 3587988164791411175->-853781601995026508 -8902739480702319713 BAM 3587988164791411175->-8902739480702319713 -8902739480702319713->8642356871089092535 -3855229073909023156 chip.xcor 5106207434023572858 XCOR Plot -3855229073909023156->5106207434023572858 -3550156037407249836 BW FC 5359685597130819044->-3550156037407249836 -7317630202347313896 BW p-val 5359685597130819044->-7317630202347313896 -3542614149618222696 FASTQ R1 (1) -3542614149618222696->3587988164791411175 -3542614149618222696->-3855229073909023156 -4291265380862674300 FASTQ R2 (1) -4291265380862674300->3587988164791411175 6131370539749102745 chip.call_peak -8313282878316911719 Peak (bfilt) 6131370539749102745->-8313282878316911719 -7799755356221872904 Peak 6131370539749102745->-7799755356221872904 -7799755356221872904->6949593375317898142 -7799755356221872904->1649413690944057068 -7799755356221872904->5518176756675810195 -7799755356221872904->7612734309475616483 -108639375986825176 chip.bam2ta -7435206447089450080 TAG-ALIGN -108639375986825176->-7435206447089450080 -7435206447089450080->-3809925774205468145 -7435206447089450080->6131370539749102745 7046313747577284922 chip.macs2_signal_track -7435206447089450080->7046313747577284922 -7435206447089450080->6188490355673249805 -7435206447089450080->5518176756675810195 -7435206447089450080->7612734309475616483 -7435206447089450080->-8584458154728388812 955882776556907928 chip.filter -8521791183821584546 SAMstats QC 955882776556907928->-8521791183821584546 6538278557195662837 Filt/deduped BAM 955882776556907928->6538278557195662837 -3591628323231673386 LibCmplx QC 955882776556907928->-3591628323231673386 6538278557195662837->-108639375986825176 6538278557195662837->-3353109092591786490 -6949559051441250429 chip.align -157011618069805077 SAMstats QC -6949559051441250429->-157011618069805077 5994424858615309296 BAM -6949559051441250429->5994424858615309296 5994424858615309296->955882776556907928 8495477536487297403 chip.xcor -3064831865456068592 XCOR Plot 8495477536487297403->-3064831865456068592 6423660340203538884 BW FC 7046313747577284922->6423660340203538884 -5438508693251713195 BW p-val 7046313747577284922->-5438508693251713195 6391152356873385676 FASTQ R1 (1) 6391152356873385676->-6949559051441250429 6391152356873385676->8495477536487297403 -6848917624727750965 FASTQ R2 (1) -6848917624727750965->-6949559051441250429 -5144543834740168129 chip.pool_ta_ctl 9209940869205440502 TAG-ALIGN -5144543834740168129->9209940869205440502 9209940869205440502->4124569248680489208 9209940869205440502->3291943933462847935 9209940869205440502->-3457172842495650616 9209940869205440502->5359685597130819044 9209940869205440502->6131370539749102745 9209940869205440502->7046313747577284922 9209940869205440502->6188490355673249805 9209940869205440502->5518176756675810195 9209940869205440502->7612734309475616483 9209940869205440502->-8584458154728388812 2029347308394114548 chip.bam2ta_ctl 6330869267687167534 TAG-ALIGN 2029347308394114548->6330869267687167534 6330869267687167534->-5144543834740168129 -1620923954153702487 Filt/deduped BAM -1620923954153702487->2029347308394114548 -1620923954153702487->-3353109092591786490 153228905025178927 chip.bam2ta_ctl -4272171790104047759 TAG-ALIGN 153228905025178927->-4272171790104047759 -4272171790104047759->-5144543834740168129 2054662942835243168 Filt/deduped BAM 2054662942835243168->153228905025178927 2054662942835243168->-3353109092591786490 -6878168088355970638 chip.bam2ta_ctl -4746714952858942158 TAG-ALIGN -6878168088355970638->-4746714952858942158 -4746714952858942158->-5144543834740168129 -3804402720391749599 Filt/deduped BAM -3804402720391749599->-6878168088355970638 -3804402720391749599->-3353109092591786490 6547098699141042854 chip.bam2ta_ctl -2805882195747376188 TAG-ALIGN 6547098699141042854->-2805882195747376188 -2805882195747376188->-5144543834740168129 6959600781580767988 Filt/deduped BAM 6959600781580767988->6547098699141042854 6959600781580767988->-3353109092591786490 6806912302583119352 chip.bam2ta_ctl -8080340625798953460 TAG-ALIGN 6806912302583119352->-8080340625798953460 -8080340625798953460->-5144543834740168129 -1351200329664296917 Filt/deduped BAM -1351200329664296917->6806912302583119352 -1351200329664296917->-3353109092591786490 -1844561350988471271 chip.bam2ta_ctl -1806586007221899872 TAG-ALIGN -1844561350988471271->-1806586007221899872 -1806586007221899872->-5144543834740168129 900972307210664229 Filt/deduped BAM 900972307210664229->-1844561350988471271 900972307210664229->-3353109092591786490 -5939785392034030949 IDR Plot ppr 6188490355673249805->-5939785392034030949 651735580099284795 IDR Peak ppr 6188490355673249805->651735580099284795 651735580099284795->7612734309475616483 4004078646647760969 IDR Plot rep1_vs_rep2 6949593375317898142->4004078646647760969 -8459469498812323454 IDR NPeak rep1_vs_rep2 6949593375317898142->-8459469498812323454 -8459469498812323454->7612734309475616483 -4660067740621943840 Overlap Peak rep1_vs_rep2 1649413690944057068->-4660067740621943840 -4660067740621943840->5518176756675810195 4559605294639630493 Overlap Peak optimal 5518176756675810195->4559605294639630493 8577254471615491912 Overlap reproducibility 5518176756675810195->8577254471615491912 -4182559239951127390 IDR Peak optimal 7612734309475616483->-4182559239951127390 -1537708497541510327 IDR reproducibility 7612734309475616483->-1537708497541510327 5452735937189886053 Overlap Peak ppr -8584458154728388812->5452735937189886053 5452735937189886053->5518176756675810195 -385433498134539322 JSD Plot -3353109092591786490->-385433498134539322

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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