File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF340HQN.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF340HQN.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF340HQN.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF340HQN.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF340HQN.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF197BIG.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF197BIG.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF197BIG.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF197BIG.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF197BIG.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF340HQN.crop_101-2bp.nodup.pr1_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF340HQN.crop_101-2bp.nodup.pr1_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF340HQN.crop_101-2bp.nodup.pr1_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF340HQN.crop_101-2bp.nodup.pr1_x_ctl.pooled.313M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF340HQN.crop_101-2bp.nodup.pr2_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF340HQN.crop_101-2bp.nodup.pr2_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF340HQN.crop_101-2bp.nodup.pr2_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF340HQN.crop_101-2bp.nodup.pr2_x_ctl.pooled.313M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF340HQN.crop_101-2bp.nodup_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF340HQN.crop_101-2bp.nodup_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF340HQN.crop_101-2bp.nodup_x_ctl.pooled.313M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF340HQN.crop_101-2bp.nodup_x_ctl.pooled.313M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF197BIG.crop_101-2bp.nodup.pr1_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF197BIG.crop_101-2bp.nodup.pr1_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF197BIG.crop_101-2bp.nodup.pr1_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF197BIG.crop_101-2bp.nodup.pr1_x_ctl.pooled.216M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF197BIG.crop_101-2bp.nodup.pr2_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF197BIG.crop_101-2bp.nodup.pr2_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF197BIG.crop_101-2bp.nodup.pr2_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF197BIG.crop_101-2bp.nodup.pr2_x_ctl.pooled.216M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF197BIG.crop_101-2bp.nodup_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF197BIG.crop_101-2bp.nodup_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF197BIG.crop_101-2bp.nodup_x_ctl.pooled.216M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF197BIG.crop_101-2bp.nodup_x_ctl.pooled.216M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF340HQN.crop_101-2bp.nodup.pr1_x_ctl.pooled.313M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF340HQN.crop_101-2bp.nodup.pr2_x_ctl.pooled.313M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF340HQN.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF340HQN.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF340HQN.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF340HQN.crop_101-2bp.nodup_x_ctl.pooled.313M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF340HQN.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF340HQN.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF340HQN.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF197BIG.crop_101-2bp.nodup.pr1_x_ctl.pooled.216M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF197BIG.crop_101-2bp.nodup.pr2_x_ctl.pooled.216M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF197BIG.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF197BIG.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF197BIG.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF197BIG.crop_101-2bp.nodup_x_ctl.pooled.216M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF197BIG.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF197BIG.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF197BIG.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF340HQN.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/dda4540a-9e0b-4469-ab9e-0b821e847e6c/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF340HQN.crop_101-2bp.nodup_x_ctl.pooled.313M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF340HQN.crop_101-2bp.nodup_x_ctl.pooled.313M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF197BIG.crop_101-2bp.nodup_x_ctl.pooled.216M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/ce70d005-3af2-47c2-926d-4ed608f29231/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF197BIG.crop_101-2bp.nodup_x_ctl.pooled.216M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 2042701025865815555 chip.macs2_signal_track_pooled 8568246242724165498 BW FC 2042701025865815555->8568246242724165498 -5582080884683632964 BW p-val 2042701025865815555->-5582080884683632964 -844164456860123405 chip.call_peak_pooled -6489258232034206155 Peak (bfilt) -844164456860123405->-6489258232034206155 -8729511492352353685 Peak -844164456860123405->-8729511492352353685 -4544135401654631934 chip.idr_ppr -8729511492352353685->-4544135401654631934 8042568793019821206 chip.idr -8729511492352353685->8042568793019821206 3362459113497668841 chip.overlap -8729511492352353685->3362459113497668841 1052215187359627185 chip.overlap_ppr -8729511492352353685->1052215187359627185 -505086391046448709 chip.pool_ta 2631046550667930932 TAG-ALIGN -505086391046448709->2631046550667930932 2631046550667930932->2042701025865815555 2631046550667930932->-844164456860123405 2631046550667930932->-4544135401654631934 2631046550667930932->8042568793019821206 2631046550667930932->3362459113497668841 2631046550667930932->1052215187359627185 -8221893508509130863 chip.call_peak 7149002640161250706 Peak (bfilt) -8221893508509130863->7149002640161250706 6620718881322688927 Peak -8221893508509130863->6620718881322688927 6620718881322688927->8042568793019821206 6620718881322688927->3362459113497668841 4532443609417541902 chip.reproducibility_overlap 6620718881322688927->4532443609417541902 -3355072997331336061 chip.reproducibility_idr 6620718881322688927->-3355072997331336061 7629766660703702526 chip.bam2ta 2519826897446815391 TAG-ALIGN 7629766660703702526->2519826897446815391 2519826897446815391->-505086391046448709 2519826897446815391->-8221893508509130863 2473693245595794805 chip.macs2_signal_track 2519826897446815391->2473693245595794805 2519826897446815391->-4544135401654631934 2519826897446815391->4532443609417541902 2519826897446815391->-3355072997331336061 2519826897446815391->1052215187359627185 4298283718534088186 chip.filter 6196112324974109649 SAMstats QC 4298283718534088186->6196112324974109649 7992292115661037942 Filt/deduped BAM 4298283718534088186->7992292115661037942 -3709310988024410159 LibCmplx QC 4298283718534088186->-3709310988024410159 7992292115661037942->7629766660703702526 7753679150807125344 chip.jsd 7992292115661037942->7753679150807125344 -7970506059016659454 chip.align 8937790898092872750 SAMstats QC -7970506059016659454->8937790898092872750 -3387152204667582674 BAM -7970506059016659454->-3387152204667582674 -3387152204667582674->4298283718534088186 7014448270426504364 chip.xcor -2202303387313770661 XCOR Plot 7014448270426504364->-2202303387313770661 -5390082424784052206 BW FC 2473693245595794805->-5390082424784052206 -252788921352961239 BW p-val 2473693245595794805->-252788921352961239 -3819002165335108040 FASTQ R1 (1) -3819002165335108040->-7970506059016659454 -3819002165335108040->7014448270426504364 1551540898739512773 FASTQ R2 (1) 1551540898739512773->-7970506059016659454 5753149554268269335 chip.call_peak 5366033281305344951 Peak (bfilt) 5753149554268269335->5366033281305344951 41833656062910619 Peak 5753149554268269335->41833656062910619 41833656062910619->8042568793019821206 41833656062910619->3362459113497668841 41833656062910619->4532443609417541902 41833656062910619->-3355072997331336061 -6744839522900230201 chip.bam2ta -5719260172049342072 TAG-ALIGN -6744839522900230201->-5719260172049342072 -5719260172049342072->-505086391046448709 -5719260172049342072->5753149554268269335 -219107501864176712 chip.macs2_signal_track -5719260172049342072->-219107501864176712 -5719260172049342072->-4544135401654631934 -5719260172049342072->4532443609417541902 -5719260172049342072->-3355072997331336061 -5719260172049342072->1052215187359627185 975051855901938425 chip.filter 893790910700488407 SAMstats QC 975051855901938425->893790910700488407 5073801629681839061 Filt/deduped BAM 975051855901938425->5073801629681839061 -7818867815762502333 LibCmplx QC 975051855901938425->-7818867815762502333 5073801629681839061->-6744839522900230201 5073801629681839061->7753679150807125344 8223076151168861615 chip.align -6299322027114872042 SAMstats QC 8223076151168861615->-6299322027114872042 285099756391366763 BAM 8223076151168861615->285099756391366763 285099756391366763->975051855901938425 4436588327879794914 chip.xcor 6954357878171846998 XCOR Plot 4436588327879794914->6954357878171846998 4743908597115390794 BW FC -219107501864176712->4743908597115390794 -7605681074051794616 BW p-val -219107501864176712->-7605681074051794616 -5438011223834339334 FASTQ R1 (1) -5438011223834339334->8223076151168861615 -5438011223834339334->4436588327879794914 6268595632346261967 FASTQ R2 (1) 6268595632346261967->8223076151168861615 -1175532633578610997 chip.pool_ta_ctl 9180361146266156405 TAG-ALIGN -1175532633578610997->9180361146266156405 9180361146266156405->2042701025865815555 9180361146266156405->-844164456860123405 9180361146266156405->-8221893508509130863 9180361146266156405->2473693245595794805 9180361146266156405->5753149554268269335 9180361146266156405->-219107501864176712 9180361146266156405->-4544135401654631934 9180361146266156405->4532443609417541902 9180361146266156405->-3355072997331336061 9180361146266156405->1052215187359627185 2439437219830002848 chip.bam2ta_ctl 3662358388251870887 TAG-ALIGN 2439437219830002848->3662358388251870887 3662358388251870887->-1175532633578610997 -2820583789479940568 Filt/deduped BAM -2820583789479940568->2439437219830002848 -2820583789479940568->7753679150807125344 2476563469368686906 chip.bam2ta_ctl -6341340700165849397 TAG-ALIGN 2476563469368686906->-6341340700165849397 -6341340700165849397->-1175532633578610997 -3506785349283725931 Filt/deduped BAM -3506785349283725931->2476563469368686906 -3506785349283725931->7753679150807125344 -6554898230065040372 chip.bam2ta_ctl 4352355137482466167 TAG-ALIGN -6554898230065040372->4352355137482466167 4352355137482466167->-1175532633578610997 -223082289202876414 Filt/deduped BAM -223082289202876414->-6554898230065040372 -223082289202876414->7753679150807125344 2756886475265192960 chip.bam2ta_ctl -6299745364939604451 TAG-ALIGN 2756886475265192960->-6299745364939604451 -6299745364939604451->-1175532633578610997 -1652118099399006809 Filt/deduped BAM -1652118099399006809->2756886475265192960 -1652118099399006809->7753679150807125344 -7175308862080352716 chip.bam2ta_ctl -6784293597791872182 TAG-ALIGN -7175308862080352716->-6784293597791872182 -6784293597791872182->-1175532633578610997 1929665401504815395 Filt/deduped BAM 1929665401504815395->-7175308862080352716 1929665401504815395->7753679150807125344 -7032299671317537834 chip.bam2ta_ctl -5961313373480811336 TAG-ALIGN -7032299671317537834->-5961313373480811336 -5961313373480811336->-1175532633578610997 6342838708539343180 Filt/deduped BAM 6342838708539343180->-7032299671317537834 6342838708539343180->7753679150807125344 -5713616927966506537 IDR Plot ppr -4544135401654631934->-5713616927966506537 121252402095042973 IDR Peak ppr -4544135401654631934->121252402095042973 121252402095042973->-3355072997331336061 3687584192270458856 IDR Plot rep1_vs_rep2 8042568793019821206->3687584192270458856 5439536716825034456 IDR NPeak rep1_vs_rep2 8042568793019821206->5439536716825034456 5439536716825034456->-3355072997331336061 7286060907306571071 Overlap Peak rep1_vs_rep2 3362459113497668841->7286060907306571071 7286060907306571071->4532443609417541902 6063351479462727100 Overlap Peak optimal 4532443609417541902->6063351479462727100 -5165529846427233965 Overlap reproducibility 4532443609417541902->-5165529846427233965 30285487801919334 IDR Peak optimal -3355072997331336061->30285487801919334 1921956136888848876 IDR reproducibility -3355072997331336061->1921956136888848876 4539856482293778371 Overlap Peak ppr 1052215187359627185->4539856482293778371 4539856482293778371->4532443609417541902 7447556524708180918 JSD Plot 7753679150807125344->7447556524708180918

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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