File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF204KLS.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF204KLS.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF204KLS.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF204KLS.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF204KLS.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF126ZYT.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF126ZYT.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF126ZYT.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF126ZYT.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF126ZYT.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF204KLS.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF204KLS.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF204KLS.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF204KLS.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF204KLS.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF204KLS.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF204KLS.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF204KLS.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF204KLS.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF204KLS.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF204KLS.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF204KLS.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF126ZYT.crop_101-2bp.nodup.pr1_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF126ZYT.crop_101-2bp.nodup.pr1_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF126ZYT.crop_101-2bp.nodup.pr1_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF126ZYT.crop_101-2bp.nodup.pr1_x_ctl.pooled.380M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF126ZYT.crop_101-2bp.nodup.pr2_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF126ZYT.crop_101-2bp.nodup.pr2_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF126ZYT.crop_101-2bp.nodup.pr2_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF126ZYT.crop_101-2bp.nodup.pr2_x_ctl.pooled.380M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF126ZYT.crop_101-2bp.nodup_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF126ZYT.crop_101-2bp.nodup_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF126ZYT.crop_101-2bp.nodup_x_ctl.pooled.380M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF126ZYT.crop_101-2bp.nodup_x_ctl.pooled.380M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF204KLS.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF204KLS.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF204KLS.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF204KLS.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF204KLS.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF204KLS.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF204KLS.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF204KLS.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF204KLS.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF126ZYT.crop_101-2bp.nodup.pr1_x_ctl.pooled.380M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF126ZYT.crop_101-2bp.nodup.pr2_x_ctl.pooled.380M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF126ZYT.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF126ZYT.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF126ZYT.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF126ZYT.crop_101-2bp.nodup_x_ctl.pooled.380M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF126ZYT.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF126ZYT.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF126ZYT.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF204KLS.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/38ce432f-b450-4cc7-9037-6de85631baee/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF204KLS.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF204KLS.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF126ZYT.crop_101-2bp.nodup_x_ctl.pooled.380M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/be475026-9984-4331-81c8-6ec14cd44072/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF126ZYT.crop_101-2bp.nodup_x_ctl.pooled.380M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 9075064305951806798 chip.macs2_signal_track_pooled 1312669271569732479 BW FC 9075064305951806798->1312669271569732479 -4727241377933645538 BW p-val 9075064305951806798->-4727241377933645538 5327658996399022702 chip.call_peak_pooled 7489455378520230426 Peak (bfilt) 5327658996399022702->7489455378520230426 367605406059478974 Peak 5327658996399022702->367605406059478974 -3101641367538670888 chip.idr_ppr 367605406059478974->-3101641367538670888 -1892717151652346787 chip.idr 367605406059478974->-1892717151652346787 1534742115270880053 chip.overlap 367605406059478974->1534742115270880053 -1619482154054549477 chip.overlap_ppr 367605406059478974->-1619482154054549477 8406736784758834673 chip.pool_ta 6372309769633630293 TAG-ALIGN 8406736784758834673->6372309769633630293 6372309769633630293->9075064305951806798 6372309769633630293->5327658996399022702 6372309769633630293->-3101641367538670888 6372309769633630293->-1892717151652346787 6372309769633630293->1534742115270880053 6372309769633630293->-1619482154054549477 -2996155258305314099 chip.call_peak 6489905221470784686 Peak (bfilt) -2996155258305314099->6489905221470784686 2902542006469827559 Peak -2996155258305314099->2902542006469827559 2902542006469827559->-1892717151652346787 2902542006469827559->1534742115270880053 -3974919131102242005 chip.reproducibility_overlap 2902542006469827559->-3974919131102242005 -8526852906944988156 chip.reproducibility_idr 2902542006469827559->-8526852906944988156 2349104168861858294 chip.bam2ta 5781935763769752033 TAG-ALIGN 2349104168861858294->5781935763769752033 5781935763769752033->8406736784758834673 5781935763769752033->-2996155258305314099 -2063311922315111260 chip.macs2_signal_track 5781935763769752033->-2063311922315111260 5781935763769752033->-3101641367538670888 5781935763769752033->-3974919131102242005 5781935763769752033->-8526852906944988156 5781935763769752033->-1619482154054549477 -5127095958778632726 chip.filter 4211565266990949213 SAMstats QC -5127095958778632726->4211565266990949213 8583116947040310440 Filt/deduped BAM -5127095958778632726->8583116947040310440 -2402312378422382381 LibCmplx QC -5127095958778632726->-2402312378422382381 8583116947040310440->2349104168861858294 7145669136313986616 chip.jsd 8583116947040310440->7145669136313986616 -3560904131146528142 chip.align -3653751891683285433 SAMstats QC -3560904131146528142->-3653751891683285433 7658477045879577076 BAM -3560904131146528142->7658477045879577076 7658477045879577076->-5127095958778632726 5792667669488964232 chip.xcor -6896255321382461565 XCOR Plot 5792667669488964232->-6896255321382461565 6429767433158253522 BW FC -2063311922315111260->6429767433158253522 -7395877542239075747 BW p-val -2063311922315111260->-7395877542239075747 -761625744738855820 FASTQ R1 (1) -761625744738855820->-3560904131146528142 -761625744738855820->5792667669488964232 -312046636284874662 FASTQ R2 (1) -312046636284874662->-3560904131146528142 -6602357921994711242 chip.call_peak -4721431569963510342 Peak (bfilt) -6602357921994711242->-4721431569963510342 -6987914582235268206 Peak -6602357921994711242->-6987914582235268206 -6987914582235268206->-1892717151652346787 -6987914582235268206->1534742115270880053 -6987914582235268206->-3974919131102242005 -6987914582235268206->-8526852906944988156 6509610286240462779 chip.bam2ta -7393621093904592962 TAG-ALIGN 6509610286240462779->-7393621093904592962 -7393621093904592962->8406736784758834673 -7393621093904592962->-6602357921994711242 -2994972608922214672 chip.macs2_signal_track -7393621093904592962->-2994972608922214672 -7393621093904592962->-3101641367538670888 -7393621093904592962->-3974919131102242005 -7393621093904592962->-8526852906944988156 -7393621093904592962->-1619482154054549477 -3392151320201621714 chip.filter 5340205673516917767 SAMstats QC -3392151320201621714->5340205673516917767 4522089515870249315 Filt/deduped BAM -3392151320201621714->4522089515870249315 -4028776125454923891 LibCmplx QC -3392151320201621714->-4028776125454923891 4522089515870249315->6509610286240462779 4522089515870249315->7145669136313986616 3643314617563763994 chip.align 978949040701687169 SAMstats QC 3643314617563763994->978949040701687169 7528272662570776144 BAM 3643314617563763994->7528272662570776144 7528272662570776144->-3392151320201621714 8380943151121950040 chip.xcor 4039627182636175892 XCOR Plot 8380943151121950040->4039627182636175892 -8523984186167983028 BW FC -2994972608922214672->-8523984186167983028 -8078176158312653643 BW p-val -2994972608922214672->-8078176158312653643 -3093728278602503816 FASTQ R1 (1) -3093728278602503816->3643314617563763994 -3093728278602503816->8380943151121950040 3227646753483145554 FASTQ R2 (1) 3227646753483145554->3643314617563763994 6205734049433764674 chip.pool_ta_ctl -231728750202619920 TAG-ALIGN 6205734049433764674->-231728750202619920 -231728750202619920->9075064305951806798 -231728750202619920->5327658996399022702 -231728750202619920->-2996155258305314099 -231728750202619920->-2063311922315111260 -231728750202619920->-6602357921994711242 -231728750202619920->-2994972608922214672 -231728750202619920->-3101641367538670888 -231728750202619920->-3974919131102242005 -231728750202619920->-8526852906944988156 -231728750202619920->-1619482154054549477 3786248275500313984 chip.bam2ta_ctl 7898990503291608622 TAG-ALIGN 3786248275500313984->7898990503291608622 7898990503291608622->6205734049433764674 5459542187600567669 Filt/deduped BAM 5459542187600567669->3786248275500313984 5459542187600567669->7145669136313986616 6052437653085964654 chip.bam2ta_ctl 4973314095277175264 TAG-ALIGN 6052437653085964654->4973314095277175264 4973314095277175264->6205734049433764674 749121790703058066 Filt/deduped BAM 749121790703058066->6052437653085964654 749121790703058066->7145669136313986616 6988326367030681339 chip.bam2ta_ctl 6393369287036325771 TAG-ALIGN 6988326367030681339->6393369287036325771 6393369287036325771->6205734049433764674 9007357103116361055 Filt/deduped BAM 9007357103116361055->6988326367030681339 9007357103116361055->7145669136313986616 573944045530930610 chip.bam2ta_ctl 7462184267579679709 TAG-ALIGN 573944045530930610->7462184267579679709 7462184267579679709->6205734049433764674 1255450733386018435 Filt/deduped BAM 1255450733386018435->573944045530930610 1255450733386018435->7145669136313986616 2528374683593172042 chip.bam2ta_ctl 7349686939847338514 TAG-ALIGN 2528374683593172042->7349686939847338514 7349686939847338514->6205734049433764674 -3557353582568347685 Filt/deduped BAM -3557353582568347685->2528374683593172042 -3557353582568347685->7145669136313986616 5282694068336110104 chip.bam2ta_ctl -7045003231024298787 TAG-ALIGN 5282694068336110104->-7045003231024298787 -7045003231024298787->6205734049433764674 -429525538926516029 Filt/deduped BAM -429525538926516029->5282694068336110104 -429525538926516029->7145669136313986616 -5118679846858648414 IDR Plot ppr -3101641367538670888->-5118679846858648414 2314400044236373354 IDR Peak ppr -3101641367538670888->2314400044236373354 2314400044236373354->-8526852906944988156 -4075435831439277985 IDR Plot rep1_vs_rep2 -1892717151652346787->-4075435831439277985 -5923418917246126696 IDR NPeak rep1_vs_rep2 -1892717151652346787->-5923418917246126696 -5923418917246126696->-8526852906944988156 9155120437943886964 Overlap Peak rep1_vs_rep2 1534742115270880053->9155120437943886964 9155120437943886964->-3974919131102242005 -3249754900177851681 Overlap Peak optimal -3974919131102242005->-3249754900177851681 -5021263491708828731 Overlap reproducibility -3974919131102242005->-5021263491708828731 1380828043835987098 IDR Peak optimal -8526852906944988156->1380828043835987098 -8871838689904859929 IDR reproducibility -8526852906944988156->-8871838689904859929 -4191874233734322791 Overlap Peak ppr -1619482154054549477->-4191874233734322791 -4191874233734322791->-3974919131102242005 -8786349249577842070 JSD Plot 7145669136313986616->-8786349249577842070

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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