File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c3548036-7f18-4bdd-9223-fea062e056df/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF700ORL.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF700ORL.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF700ORL.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF700ORL.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF700ORL.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF783BKL.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF783BKL.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF783BKL.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF783BKL.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF783BKL.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF700ORL.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF700ORL.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF700ORL.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF700ORL.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF700ORL.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF700ORL.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF783BKL.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF783BKL.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF783BKL.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF783BKL.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF783BKL.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF783BKL.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF700ORL.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/466299ae-9863-477f-b2a7-46c37add7e0e/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 6021033898041649778 chip.macs2_signal_track_pooled 3742073286307738538 BW FC 6021033898041649778->3742073286307738538 4180937047402790619 BW p-val 6021033898041649778->4180937047402790619 -4193146375129480182 chip.call_peak_pooled 6546274039371412914 Peak (bfilt) -4193146375129480182->6546274039371412914 -4801272677017482874 Peak -4193146375129480182->-4801272677017482874 -3724879915388763171 chip.idr_ppr -4801272677017482874->-3724879915388763171 4141994390613233155 chip.idr -4801272677017482874->4141994390613233155 5157123977497340304 chip.overlap -4801272677017482874->5157123977497340304 6112460409999284826 chip.overlap_ppr -4801272677017482874->6112460409999284826 -1995751437249698204 chip.pool_ta -3846437508303569712 TAG-ALIGN -1995751437249698204->-3846437508303569712 -3846437508303569712->6021033898041649778 -3846437508303569712->-4193146375129480182 -3846437508303569712->-3724879915388763171 -3846437508303569712->4141994390613233155 -3846437508303569712->5157123977497340304 -3846437508303569712->6112460409999284826 -2234011157367502634 chip.call_peak 6621090676939635676 Peak (bfilt) -2234011157367502634->6621090676939635676 -5236915083036173503 Peak -2234011157367502634->-5236915083036173503 -5236915083036173503->4141994390613233155 -5236915083036173503->5157123977497340304 -1079378394750781009 chip.reproducibility_overlap -5236915083036173503->-1079378394750781009 4606281273385834551 chip.reproducibility_idr -5236915083036173503->4606281273385834551 -591499345790609304 chip.bam2ta -3634947636714034095 TAG-ALIGN -591499345790609304->-3634947636714034095 -3634947636714034095->-1995751437249698204 -3634947636714034095->-2234011157367502634 2450128062482808887 chip.macs2_signal_track -3634947636714034095->2450128062482808887 -3634947636714034095->-3724879915388763171 -3634947636714034095->-1079378394750781009 -3634947636714034095->4606281273385834551 -3634947636714034095->6112460409999284826 6743243223686380722 chip.filter -3266715935147161082 SAMstats QC 6743243223686380722->-3266715935147161082 3484554740448117089 Filt/deduped BAM 6743243223686380722->3484554740448117089 8773265858294036835 LibCmplx QC 6743243223686380722->8773265858294036835 3484554740448117089->-591499345790609304 5956700615306720958 chip.jsd 3484554740448117089->5956700615306720958 -5905598099938190213 chip.align -1323972047744379933 SAMstats QC -5905598099938190213->-1323972047744379933 9179275544885478184 BAM -5905598099938190213->9179275544885478184 9179275544885478184->6743243223686380722 915628727712017326 chip.xcor -1662053097667900996 XCOR Plot 915628727712017326->-1662053097667900996 1175491258752112255 BW FC 2450128062482808887->1175491258752112255 3244086021286319259 BW p-val 2450128062482808887->3244086021286319259 -1834306068626133409 FASTQ R1 (1) -1834306068626133409->-5905598099938190213 -1834306068626133409->915628727712017326 -1169741342625905824 FASTQ R2 (1) -1169741342625905824->-5905598099938190213 3535721840349980287 chip.call_peak 1554032848849582211 Peak (bfilt) 3535721840349980287->1554032848849582211 -8334957953716414084 Peak 3535721840349980287->-8334957953716414084 -8334957953716414084->4141994390613233155 -8334957953716414084->5157123977497340304 -8334957953716414084->-1079378394750781009 -8334957953716414084->4606281273385834551 -8236325006842718856 chip.bam2ta 7334619613791450751 TAG-ALIGN -8236325006842718856->7334619613791450751 7334619613791450751->-1995751437249698204 7334619613791450751->3535721840349980287 -5641033112123193695 chip.macs2_signal_track 7334619613791450751->-5641033112123193695 7334619613791450751->-3724879915388763171 7334619613791450751->-1079378394750781009 7334619613791450751->4606281273385834551 7334619613791450751->6112460409999284826 7123206905280753685 chip.filter -6634394974483548634 SAMstats QC 7123206905280753685->-6634394974483548634 -1594663887202133240 Filt/deduped BAM 7123206905280753685->-1594663887202133240 7614215906818609282 LibCmplx QC 7123206905280753685->7614215906818609282 -1594663887202133240->-8236325006842718856 -1594663887202133240->5956700615306720958 1602541320448516937 chip.align 319121715084880761 SAMstats QC 1602541320448516937->319121715084880761 -6647991012062740475 BAM 1602541320448516937->-6647991012062740475 -6647991012062740475->7123206905280753685 9208821508499554096 chip.xcor -2722983197821458854 XCOR Plot 9208821508499554096->-2722983197821458854 6405695779971339913 BW FC -5641033112123193695->6405695779971339913 -1590666118928661991 BW p-val -5641033112123193695->-1590666118928661991 -7448654038933843992 FASTQ R1 (1) -7448654038933843992->1602541320448516937 -7448654038933843992->9208821508499554096 -947189058672382815 FASTQ R2 (1) -947189058672382815->1602541320448516937 4496725075706075201 chip.pool_ta_ctl -2461713961063915007 TAG-ALIGN 4496725075706075201->-2461713961063915007 -2461713961063915007->6021033898041649778 -2461713961063915007->-4193146375129480182 -2461713961063915007->-2234011157367502634 -2461713961063915007->2450128062482808887 -2461713961063915007->3535721840349980287 -2461713961063915007->-5641033112123193695 -2461713961063915007->-3724879915388763171 -2461713961063915007->-1079378394750781009 -2461713961063915007->4606281273385834551 -2461713961063915007->6112460409999284826 -3800108472823880151 chip.bam2ta_ctl 5491499498314596761 TAG-ALIGN -3800108472823880151->5491499498314596761 5491499498314596761->4496725075706075201 2991986410594467140 Filt/deduped BAM 2991986410594467140->-3800108472823880151 2991986410594467140->5956700615306720958 -6386572064618500451 chip.bam2ta_ctl 3703717803438248058 TAG-ALIGN -6386572064618500451->3703717803438248058 3703717803438248058->4496725075706075201 2762211905904131218 Filt/deduped BAM 2762211905904131218->-6386572064618500451 2762211905904131218->5956700615306720958 -441673625342662606 chip.bam2ta_ctl -861091399960301312 TAG-ALIGN -441673625342662606->-861091399960301312 -861091399960301312->4496725075706075201 -3782237023073131006 Filt/deduped BAM -3782237023073131006->-441673625342662606 -3782237023073131006->5956700615306720958 1668814126742123364 chip.bam2ta_ctl -6022189856637522521 TAG-ALIGN 1668814126742123364->-6022189856637522521 -6022189856637522521->4496725075706075201 6069299842225552710 Filt/deduped BAM 6069299842225552710->1668814126742123364 6069299842225552710->5956700615306720958 1140590087072843507 chip.bam2ta_ctl -7835525888671050622 TAG-ALIGN 1140590087072843507->-7835525888671050622 -7835525888671050622->4496725075706075201 -6516731723924922681 Filt/deduped BAM -6516731723924922681->1140590087072843507 -6516731723924922681->5956700615306720958 -5969715184896043364 chip.bam2ta_ctl 3148186764650928596 TAG-ALIGN -5969715184896043364->3148186764650928596 3148186764650928596->4496725075706075201 5519332309220882097 Filt/deduped BAM 5519332309220882097->-5969715184896043364 5519332309220882097->5956700615306720958 -9148473755353211508 IDR Plot ppr -3724879915388763171->-9148473755353211508 4788220960831279007 IDR Peak ppr -3724879915388763171->4788220960831279007 4788220960831279007->4606281273385834551 2070709546642560458 IDR Plot rep1_vs_rep2 4141994390613233155->2070709546642560458 -1003522387347919567 IDR NPeak rep1_vs_rep2 4141994390613233155->-1003522387347919567 -1003522387347919567->4606281273385834551 -2180267472267705177 Overlap Peak rep1_vs_rep2 5157123977497340304->-2180267472267705177 -2180267472267705177->-1079378394750781009 7944984802650874885 Overlap Peak optimal -1079378394750781009->7944984802650874885 5731883570623353297 Overlap reproducibility -1079378394750781009->5731883570623353297 -5812129200516273882 IDR Peak optimal 4606281273385834551->-5812129200516273882 -1786001288011845534 IDR reproducibility 4606281273385834551->-1786001288011845534 866730007524334057 Overlap Peak ppr 6112460409999284826->866730007524334057 866730007524334057->-1079378394750781009 3327861901811488868 JSD Plot 5956700615306720958->3327861901811488868

UCSC browser tracks

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UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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