File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/a10a7070-199d-46a9-86eb-c50f7d7322b1/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c4a44d6b-9471-4ee2-9b0e-6cdd4e5fc01e/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF700ORL.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF700ORL.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF700ORL.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF700ORL.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF700ORL.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF783BKL.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF783BKL.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF783BKL.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF783BKL.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF783BKL.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF700ORL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF700ORL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF700ORL.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF700ORL.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF700ORL.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF700ORL.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF700ORL.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF700ORL.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF783BKL.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF783BKL.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF783BKL.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF783BKL.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF783BKL.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF783BKL.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF783BKL.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF783BKL.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF700ORL.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF700ORL.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/8f0bc64e-b0fd-4356-9a82-3f9ceb918cf2/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF783BKL.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -5982126237832139233 chip.macs2_signal_track_pooled -8989043112071021669 BW FC -5982126237832139233->-8989043112071021669 -7065058646650306057 BW p-val -5982126237832139233->-7065058646650306057 6529476701380528078 chip.call_peak_pooled -2062723463662688629 Peak (bfilt) 6529476701380528078->-2062723463662688629 7541759431928512809 Peak 6529476701380528078->7541759431928512809 641164162333361157 chip.idr_ppr 7541759431928512809->641164162333361157 3855440739503214177 chip.idr 7541759431928512809->3855440739503214177 6319429219162157060 chip.overlap 7541759431928512809->6319429219162157060 2949624490971751021 chip.overlap_ppr 7541759431928512809->2949624490971751021 -2508649540865785407 chip.pool_ta 639507401727266510 TAG-ALIGN -2508649540865785407->639507401727266510 639507401727266510->-5982126237832139233 639507401727266510->6529476701380528078 639507401727266510->641164162333361157 639507401727266510->3855440739503214177 639507401727266510->6319429219162157060 639507401727266510->2949624490971751021 -6533123737710052166 chip.call_peak 3537976948573033331 Peak (bfilt) -6533123737710052166->3537976948573033331 7561048116144577391 Peak -6533123737710052166->7561048116144577391 7561048116144577391->3855440739503214177 7561048116144577391->6319429219162157060 474500731801512122 chip.reproducibility_overlap 7561048116144577391->474500731801512122 5982418946853687804 chip.reproducibility_idr 7561048116144577391->5982418946853687804 -3571805906837331535 chip.bam2ta -5254900353235334144 TAG-ALIGN -3571805906837331535->-5254900353235334144 -5254900353235334144->-2508649540865785407 -5254900353235334144->-6533123737710052166 1480187289077219498 chip.macs2_signal_track -5254900353235334144->1480187289077219498 -5254900353235334144->641164162333361157 -5254900353235334144->474500731801512122 -5254900353235334144->5982418946853687804 -5254900353235334144->2949624490971751021 6565762629048079877 chip.filter -8597604157073131729 SAMstats QC 6565762629048079877->-8597604157073131729 -4744496150070825675 Filt/deduped BAM 6565762629048079877->-4744496150070825675 4551867981151667590 LibCmplx QC 6565762629048079877->4551867981151667590 -4744496150070825675->-3571805906837331535 -6055242556399305531 chip.jsd -4744496150070825675->-6055242556399305531 8208758495646911615 chip.align -8520021170582282332 SAMstats QC 8208758495646911615->-8520021170582282332 3347442026387264688 BAM 8208758495646911615->3347442026387264688 3347442026387264688->6565762629048079877 8235703319178544820 chip.xcor -8841664207901036192 XCOR Plot 8235703319178544820->-8841664207901036192 -4162641989892068141 BW FC 1480187289077219498->-4162641989892068141 1211502362362193226 BW p-val 1480187289077219498->1211502362362193226 -1649205836191777450 FASTQ R1 (1) -1649205836191777450->8208758495646911615 -1649205836191777450->8235703319178544820 2120933190610449830 FASTQ R2 (1) 2120933190610449830->8208758495646911615 -5980071862497336702 chip.call_peak -1439439184342189700 Peak (bfilt) -5980071862497336702->-1439439184342189700 1098028400233021682 Peak -5980071862497336702->1098028400233021682 1098028400233021682->3855440739503214177 1098028400233021682->6319429219162157060 1098028400233021682->474500731801512122 1098028400233021682->5982418946853687804 -2074428785609221819 chip.bam2ta 4323819045463768453 TAG-ALIGN -2074428785609221819->4323819045463768453 4323819045463768453->-2508649540865785407 4323819045463768453->-5980071862497336702 -1955942753996854917 chip.macs2_signal_track 4323819045463768453->-1955942753996854917 4323819045463768453->641164162333361157 4323819045463768453->474500731801512122 4323819045463768453->5982418946853687804 4323819045463768453->2949624490971751021 1540279787564420088 chip.filter 3843028188965500916 SAMstats QC 1540279787564420088->3843028188965500916 -2893230896216398815 Filt/deduped BAM 1540279787564420088->-2893230896216398815 1575344607148757356 LibCmplx QC 1540279787564420088->1575344607148757356 -2893230896216398815->-2074428785609221819 -2893230896216398815->-6055242556399305531 2988811889342076362 chip.align -5640360873755666005 SAMstats QC 2988811889342076362->-5640360873755666005 -5209696534715933165 BAM 2988811889342076362->-5209696534715933165 -5209696534715933165->1540279787564420088 2594041690359992643 chip.xcor 2450914885112764452 XCOR Plot 2594041690359992643->2450914885112764452 -9213692807180164189 BW FC -1955942753996854917->-9213692807180164189 5555762760961005576 BW p-val -1955942753996854917->5555762760961005576 5300278532033883187 FASTQ R1 (1) 5300278532033883187->2988811889342076362 5300278532033883187->2594041690359992643 -1171501690810445012 FASTQ R2 (1) -1171501690810445012->2988811889342076362 6928231780238316930 chip.pool_ta_ctl 7280975833903847249 TAG-ALIGN 6928231780238316930->7280975833903847249 7280975833903847249->-5982126237832139233 7280975833903847249->6529476701380528078 7280975833903847249->-6533123737710052166 7280975833903847249->1480187289077219498 7280975833903847249->-5980071862497336702 7280975833903847249->-1955942753996854917 7280975833903847249->641164162333361157 7280975833903847249->474500731801512122 7280975833903847249->5982418946853687804 7280975833903847249->2949624490971751021 3708975110693815087 chip.bam2ta_ctl 4547891065716498163 TAG-ALIGN 3708975110693815087->4547891065716498163 4547891065716498163->6928231780238316930 -4642601280380192900 Filt/deduped BAM -4642601280380192900->3708975110693815087 -4642601280380192900->-6055242556399305531 3920493577143354095 chip.bam2ta_ctl -7904206456765129435 TAG-ALIGN 3920493577143354095->-7904206456765129435 -7904206456765129435->6928231780238316930 7416446954868860781 Filt/deduped BAM 7416446954868860781->3920493577143354095 7416446954868860781->-6055242556399305531 -6783747607001233 chip.bam2ta_ctl 8174063534842092428 TAG-ALIGN -6783747607001233->8174063534842092428 8174063534842092428->6928231780238316930 6694298244526900991 Filt/deduped BAM 6694298244526900991->-6783747607001233 6694298244526900991->-6055242556399305531 9188090968628743507 chip.bam2ta_ctl -430392500193501378 TAG-ALIGN 9188090968628743507->-430392500193501378 -430392500193501378->6928231780238316930 -8226253173015682362 Filt/deduped BAM -8226253173015682362->9188090968628743507 -8226253173015682362->-6055242556399305531 2808936146223870322 chip.bam2ta_ctl 3872559642187129332 TAG-ALIGN 2808936146223870322->3872559642187129332 3872559642187129332->6928231780238316930 5851730531352925740 Filt/deduped BAM 5851730531352925740->2808936146223870322 5851730531352925740->-6055242556399305531 -8842003716350816659 chip.bam2ta_ctl -8824305561139790923 TAG-ALIGN -8842003716350816659->-8824305561139790923 -8824305561139790923->6928231780238316930 -8420633877142734677 Filt/deduped BAM -8420633877142734677->-8842003716350816659 -8420633877142734677->-6055242556399305531 857989319142901915 IDR Plot ppr 641164162333361157->857989319142901915 8954070568178949919 IDR Peak ppr 641164162333361157->8954070568178949919 8954070568178949919->5982418946853687804 3725379642893588353 IDR Plot rep1_vs_rep2 3855440739503214177->3725379642893588353 3603989577878438997 IDR NPeak rep1_vs_rep2 3855440739503214177->3603989577878438997 3603989577878438997->5982418946853687804 8746980132531963068 Overlap Peak rep1_vs_rep2 6319429219162157060->8746980132531963068 8746980132531963068->474500731801512122 -7721042097182769010 Overlap Peak optimal 474500731801512122->-7721042097182769010 9033934693083624484 Overlap reproducibility 474500731801512122->9033934693083624484 6758511607088898995 IDR Peak optimal 5982418946853687804->6758511607088898995 -2907828029964507177 IDR reproducibility 5982418946853687804->-2907828029964507177 -7766751025720330789 Overlap Peak ppr 2949624490971751021->-7766751025720330789 -7766751025720330789->474500731801512122 7170837853514702503 JSD Plot -6055242556399305531->7170837853514702503

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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