File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF681BWM.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF681BWM.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF681BWM.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF681BWM.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF681BWM.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF234XIN.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF234XIN.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF234XIN.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF234XIN.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF234XIN.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF681BWM.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF681BWM.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF681BWM.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF681BWM.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF681BWM.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF681BWM.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF234XIN.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF234XIN.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF234XIN.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF234XIN.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF234XIN.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF234XIN.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF681BWM.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -1539094526074413137 chip.macs2_signal_track_pooled -3583088498616360447 BW FC -1539094526074413137->-3583088498616360447 6823868613516760986 BW p-val -1539094526074413137->6823868613516760986 2494831099506476588 chip.call_peak_pooled -1831981649483537962 Peak (bfilt) 2494831099506476588->-1831981649483537962 -3938154231865039839 Peak 2494831099506476588->-3938154231865039839 7991715399273871166 chip.idr_ppr -3938154231865039839->7991715399273871166 1265053185042727406 chip.idr -3938154231865039839->1265053185042727406 -7705480829864943333 chip.overlap -3938154231865039839->-7705480829864943333 4741348663570586487 chip.overlap_ppr -3938154231865039839->4741348663570586487 4009720651128203947 chip.pool_ta -6004115998127319872 TAG-ALIGN 4009720651128203947->-6004115998127319872 -6004115998127319872->-1539094526074413137 -6004115998127319872->2494831099506476588 -6004115998127319872->7991715399273871166 -6004115998127319872->1265053185042727406 -6004115998127319872->-7705480829864943333 -6004115998127319872->4741348663570586487 -3107060156039136933 chip.call_peak 1985184363740985649 Peak (bfilt) -3107060156039136933->1985184363740985649 215234751006112031 Peak -3107060156039136933->215234751006112031 215234751006112031->1265053185042727406 215234751006112031->-7705480829864943333 -3996150193029679610 chip.reproducibility_overlap 215234751006112031->-3996150193029679610 -7733293703242198070 chip.reproducibility_idr 215234751006112031->-7733293703242198070 9196542732277332246 chip.bam2ta -3691027532067222793 TAG-ALIGN 9196542732277332246->-3691027532067222793 -3691027532067222793->4009720651128203947 -3691027532067222793->-3107060156039136933 610502951714864360 chip.macs2_signal_track -3691027532067222793->610502951714864360 -3691027532067222793->7991715399273871166 -3691027532067222793->-3996150193029679610 -3691027532067222793->-7733293703242198070 -3691027532067222793->4741348663570586487 -641346079777676723 chip.filter 7936403223477706985 SAMstats QC -641346079777676723->7936403223477706985 3729072220101078074 Filt/deduped BAM -641346079777676723->3729072220101078074 -7177980029389127537 LibCmplx QC -641346079777676723->-7177980029389127537 3729072220101078074->9196542732277332246 1690333634761358499 chip.jsd 3729072220101078074->1690333634761358499 4599283628209188988 chip.align -5060936662496829555 SAMstats QC 4599283628209188988->-5060936662496829555 -2065533246975819101 BAM 4599283628209188988->-2065533246975819101 -2065533246975819101->-641346079777676723 3722482988884556296 chip.xcor 1393713213268959511 XCOR Plot 3722482988884556296->1393713213268959511 -7386232839172647805 BW FC 610502951714864360->-7386232839172647805 -3630101798209646458 BW p-val 610502951714864360->-3630101798209646458 4825455436776798948 FASTQ R1 (1) 4825455436776798948->4599283628209188988 4825455436776798948->3722482988884556296 -4035727200646352343 FASTQ R2 (1) -4035727200646352343->4599283628209188988 -5412569683990738895 chip.call_peak -2822927736174221037 Peak (bfilt) -5412569683990738895->-2822927736174221037 4009341051888596298 Peak -5412569683990738895->4009341051888596298 4009341051888596298->1265053185042727406 4009341051888596298->-7705480829864943333 4009341051888596298->-3996150193029679610 4009341051888596298->-7733293703242198070 5618341107966753872 chip.bam2ta -1886735841324667082 TAG-ALIGN 5618341107966753872->-1886735841324667082 -1886735841324667082->4009720651128203947 -1886735841324667082->-5412569683990738895 -6601232903121746667 chip.macs2_signal_track -1886735841324667082->-6601232903121746667 -1886735841324667082->7991715399273871166 -1886735841324667082->-3996150193029679610 -1886735841324667082->-7733293703242198070 -1886735841324667082->4741348663570586487 -3904308850825490781 chip.filter -3768080397801424971 SAMstats QC -3904308850825490781->-3768080397801424971 8162659342972262616 Filt/deduped BAM -3904308850825490781->8162659342972262616 -2954494657523696959 LibCmplx QC -3904308850825490781->-2954494657523696959 8162659342972262616->5618341107966753872 8162659342972262616->1690333634761358499 -2023737619792897286 chip.align 4524013399164347837 SAMstats QC -2023737619792897286->4524013399164347837 -4380946237247129403 BAM -2023737619792897286->-4380946237247129403 -4380946237247129403->-3904308850825490781 2944435462726468140 chip.xcor 1867016460270301838 XCOR Plot 2944435462726468140->1867016460270301838 -6674924425580396527 BW FC -6601232903121746667->-6674924425580396527 3126131439292940223 BW p-val -6601232903121746667->3126131439292940223 -742256139610063094 FASTQ R1 (1) -742256139610063094->-2023737619792897286 -742256139610063094->2944435462726468140 5629059953991156710 FASTQ R2 (1) 5629059953991156710->-2023737619792897286 -2054806877596577044 chip.pool_ta_ctl 417904607608709897 TAG-ALIGN -2054806877596577044->417904607608709897 417904607608709897->-1539094526074413137 417904607608709897->2494831099506476588 417904607608709897->-3107060156039136933 417904607608709897->610502951714864360 417904607608709897->-5412569683990738895 417904607608709897->-6601232903121746667 417904607608709897->7991715399273871166 417904607608709897->-3996150193029679610 417904607608709897->-7733293703242198070 417904607608709897->4741348663570586487 9131589590788156537 chip.bam2ta_ctl 7380143184867758802 TAG-ALIGN 9131589590788156537->7380143184867758802 7380143184867758802->-2054806877596577044 9072519904969502298 Filt/deduped BAM 9072519904969502298->9131589590788156537 9072519904969502298->1690333634761358499 -2073038679263272485 chip.bam2ta_ctl -3788875425281981958 TAG-ALIGN -2073038679263272485->-3788875425281981958 -3788875425281981958->-2054806877596577044 590668397998033455 Filt/deduped BAM 590668397998033455->-2073038679263272485 590668397998033455->1690333634761358499 7894119902201332346 chip.bam2ta_ctl 4346300626904951520 TAG-ALIGN 7894119902201332346->4346300626904951520 4346300626904951520->-2054806877596577044 8309704872854628509 Filt/deduped BAM 8309704872854628509->7894119902201332346 8309704872854628509->1690333634761358499 -3820765496169738369 chip.bam2ta_ctl 4983885890150172010 TAG-ALIGN -3820765496169738369->4983885890150172010 4983885890150172010->-2054806877596577044 -367439917331899023 Filt/deduped BAM -367439917331899023->-3820765496169738369 -367439917331899023->1690333634761358499 -4576534005392772469 chip.bam2ta_ctl 6750087224147780898 TAG-ALIGN -4576534005392772469->6750087224147780898 6750087224147780898->-2054806877596577044 8074723253893294528 Filt/deduped BAM 8074723253893294528->-4576534005392772469 8074723253893294528->1690333634761358499 3419002914984346033 chip.bam2ta_ctl -4668132981611728249 TAG-ALIGN 3419002914984346033->-4668132981611728249 -4668132981611728249->-2054806877596577044 -3981476985668709502 Filt/deduped BAM -3981476985668709502->3419002914984346033 -3981476985668709502->1690333634761358499 1729192506757730830 IDR Plot ppr 7991715399273871166->1729192506757730830 8714282902090943000 IDR Peak ppr 7991715399273871166->8714282902090943000 8714282902090943000->-7733293703242198070 5146276257678317260 IDR Plot rep1_vs_rep2 1265053185042727406->5146276257678317260 -5052681124595536798 IDR NPeak rep1_vs_rep2 1265053185042727406->-5052681124595536798 -5052681124595536798->-7733293703242198070 3312663600102870801 Overlap Peak rep1_vs_rep2 -7705480829864943333->3312663600102870801 3312663600102870801->-3996150193029679610 79120745733902703 Overlap Peak optimal -3996150193029679610->79120745733902703 -6832052710419987096 Overlap reproducibility -3996150193029679610->-6832052710419987096 -5900171692193263773 IDR Peak optimal -7733293703242198070->-5900171692193263773 3296309411830923373 IDR reproducibility -7733293703242198070->3296309411830923373 -4113936642882278620 Overlap Peak ppr 4741348663570586487->-4113936642882278620 -4113936642882278620->-3996150193029679610 -3155364647399918347 JSD Plot 1690333634761358499->-3155364647399918347

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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