File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF681BWM.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF681BWM.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF681BWM.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF681BWM.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF681BWM.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF234XIN.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF234XIN.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF234XIN.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF234XIN.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF234XIN.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF681BWM.crop_101-2bp.nodup.pr1_x_ctl.pooled.389M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF681BWM.crop_101-2bp.nodup.pr2_x_ctl.pooled.389M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF681BWM.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF681BWM.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF681BWM.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF681BWM.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF681BWM.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF681BWM.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF234XIN.crop_101-2bp.nodup.pr1_x_ctl.pooled.303M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF234XIN.crop_101-2bp.nodup.pr2_x_ctl.pooled.303M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF234XIN.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF234XIN.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF234XIN.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF234XIN.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF234XIN.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF234XIN.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF681BWM.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/c18466a1-f8bf-4ccd-b95b-f8ee7efc0773/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF681BWM.crop_101-2bp.nodup_x_ctl.pooled.389M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8de8a3dc-848d-42e6-a7b1-cdd617657cf2/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF234XIN.crop_101-2bp.nodup_x_ctl.pooled.303M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -8357145543115958468 chip.macs2_signal_track_pooled -1432018007286705247 BW FC -8357145543115958468->-1432018007286705247 2218239826002743073 BW p-val -8357145543115958468->2218239826002743073 5635599840942073933 chip.call_peak_pooled -8346350994767144284 Peak (bfilt) 5635599840942073933->-8346350994767144284 -1758037799098229787 Peak 5635599840942073933->-1758037799098229787 -1549526010305216707 chip.idr_ppr -1758037799098229787->-1549526010305216707 8733243077933774640 chip.idr -1758037799098229787->8733243077933774640 633560993663698435 chip.overlap -1758037799098229787->633560993663698435 -3792436859097688133 chip.overlap_ppr -1758037799098229787->-3792436859097688133 9009758180092505484 chip.pool_ta 7428776230997054063 TAG-ALIGN 9009758180092505484->7428776230997054063 7428776230997054063->-8357145543115958468 7428776230997054063->5635599840942073933 7428776230997054063->-1549526010305216707 7428776230997054063->8733243077933774640 7428776230997054063->633560993663698435 7428776230997054063->-3792436859097688133 -6321192292073289429 chip.call_peak -8528696192722752401 Peak (bfilt) -6321192292073289429->-8528696192722752401 -515048256032753323 Peak -6321192292073289429->-515048256032753323 -515048256032753323->8733243077933774640 -515048256032753323->633560993663698435 3082324640366304261 chip.reproducibility_overlap -515048256032753323->3082324640366304261 667626868782164308 chip.reproducibility_idr -515048256032753323->667626868782164308 4069813776587539860 chip.bam2ta -3737004426484316088 TAG-ALIGN 4069813776587539860->-3737004426484316088 -3737004426484316088->9009758180092505484 -3737004426484316088->-6321192292073289429 -316402013099181992 chip.macs2_signal_track -3737004426484316088->-316402013099181992 -3737004426484316088->-1549526010305216707 -3737004426484316088->3082324640366304261 -3737004426484316088->667626868782164308 -3737004426484316088->-3792436859097688133 2311672626710965449 chip.filter 6505488172407396459 SAMstats QC 2311672626710965449->6505488172407396459 -7401732511661548778 Filt/deduped BAM 2311672626710965449->-7401732511661548778 997564667719817206 LibCmplx QC 2311672626710965449->997564667719817206 -7401732511661548778->4069813776587539860 5645640613019116484 chip.jsd -7401732511661548778->5645640613019116484 8719782771377091993 chip.align -5609191031242339386 SAMstats QC 8719782771377091993->-5609191031242339386 4758370640768732994 BAM 8719782771377091993->4758370640768732994 4758370640768732994->2311672626710965449 1418146622824643690 chip.xcor -6278461086519041614 XCOR Plot 1418146622824643690->-6278461086519041614 6421304890472361512 BW FC -316402013099181992->6421304890472361512 7395916389127695857 BW p-val -316402013099181992->7395916389127695857 1875603785304425624 FASTQ R1 (1) 1875603785304425624->8719782771377091993 1875603785304425624->1418146622824643690 -1385621375099345392 FASTQ R2 (1) -1385621375099345392->8719782771377091993 6228067239458515365 chip.call_peak -871405457824705672 Peak (bfilt) 6228067239458515365->-871405457824705672 -7131192376574626091 Peak 6228067239458515365->-7131192376574626091 -7131192376574626091->8733243077933774640 -7131192376574626091->633560993663698435 -7131192376574626091->3082324640366304261 -7131192376574626091->667626868782164308 295710589075722341 chip.bam2ta -5438419434778117028 TAG-ALIGN 295710589075722341->-5438419434778117028 -5438419434778117028->9009758180092505484 -5438419434778117028->6228067239458515365 3366539113048309379 chip.macs2_signal_track -5438419434778117028->3366539113048309379 -5438419434778117028->-1549526010305216707 -5438419434778117028->3082324640366304261 -5438419434778117028->667626868782164308 -5438419434778117028->-3792436859097688133 -6417547880391411600 chip.filter 3471556596719263514 SAMstats QC -6417547880391411600->3471556596719263514 -2582848297497879284 Filt/deduped BAM -6417547880391411600->-2582848297497879284 -6774450849828533257 LibCmplx QC -6417547880391411600->-6774450849828533257 -2582848297497879284->295710589075722341 -2582848297497879284->5645640613019116484 -3126530755991370260 chip.align 280939691992599237 SAMstats QC -3126530755991370260->280939691992599237 -1016724061852618402 BAM -3126530755991370260->-1016724061852618402 -1016724061852618402->-6417547880391411600 4942590216898103844 chip.xcor -5349228929241868709 XCOR Plot 4942590216898103844->-5349228929241868709 7703060487315589838 BW FC 3366539113048309379->7703060487315589838 -5973929619096737262 BW p-val 3366539113048309379->-5973929619096737262 5916209378112326997 FASTQ R1 (1) 5916209378112326997->-3126530755991370260 5916209378112326997->4942590216898103844 -2842406368372688606 FASTQ R2 (1) -2842406368372688606->-3126530755991370260 2065547772563468699 chip.pool_ta_ctl -1365013524324466058 TAG-ALIGN 2065547772563468699->-1365013524324466058 -1365013524324466058->-8357145543115958468 -1365013524324466058->5635599840942073933 -1365013524324466058->-6321192292073289429 -1365013524324466058->-316402013099181992 -1365013524324466058->6228067239458515365 -1365013524324466058->3366539113048309379 -1365013524324466058->-1549526010305216707 -1365013524324466058->3082324640366304261 -1365013524324466058->667626868782164308 -1365013524324466058->-3792436859097688133 -3762373253572480380 chip.bam2ta_ctl -5483294542939680685 TAG-ALIGN -3762373253572480380->-5483294542939680685 -5483294542939680685->2065547772563468699 -9059167620391160717 Filt/deduped BAM -9059167620391160717->-3762373253572480380 -9059167620391160717->5645640613019116484 -8211104676630310313 chip.bam2ta_ctl -3485983388764899980 TAG-ALIGN -8211104676630310313->-3485983388764899980 -3485983388764899980->2065547772563468699 3865348549395966774 Filt/deduped BAM 3865348549395966774->-8211104676630310313 3865348549395966774->5645640613019116484 7287575740369804243 chip.bam2ta_ctl 6519623218534761436 TAG-ALIGN 7287575740369804243->6519623218534761436 6519623218534761436->2065547772563468699 9096654478988676243 Filt/deduped BAM 9096654478988676243->7287575740369804243 9096654478988676243->5645640613019116484 -3632773427648321477 chip.bam2ta_ctl -8350607245422517814 TAG-ALIGN -3632773427648321477->-8350607245422517814 -8350607245422517814->2065547772563468699 -4929833085298291562 Filt/deduped BAM -4929833085298291562->-3632773427648321477 -4929833085298291562->5645640613019116484 -7479096952658313249 chip.bam2ta_ctl -7480732420484356389 TAG-ALIGN -7479096952658313249->-7480732420484356389 -7480732420484356389->2065547772563468699 -1211708640079300168 Filt/deduped BAM -1211708640079300168->-7479096952658313249 -1211708640079300168->5645640613019116484 5713490945983320185 chip.bam2ta_ctl 1666247791020882384 TAG-ALIGN 5713490945983320185->1666247791020882384 1666247791020882384->2065547772563468699 -1009159205529128228 Filt/deduped BAM -1009159205529128228->5713490945983320185 -1009159205529128228->5645640613019116484 -1713050403853530608 IDR Plot ppr -1549526010305216707->-1713050403853530608 -3121469326707116285 IDR Peak ppr -1549526010305216707->-3121469326707116285 -3121469326707116285->667626868782164308 -7521415690974674908 IDR Plot rep1_vs_rep2 8733243077933774640->-7521415690974674908 4908789581419776802 IDR NPeak rep1_vs_rep2 8733243077933774640->4908789581419776802 4908789581419776802->667626868782164308 -287961781691394965 Overlap Peak rep1_vs_rep2 633560993663698435->-287961781691394965 -287961781691394965->3082324640366304261 -6842985160122040916 Overlap Peak optimal 3082324640366304261->-6842985160122040916 4172283099400057947 Overlap reproducibility 3082324640366304261->4172283099400057947 7933830448548156314 IDR Peak optimal 667626868782164308->7933830448548156314 8925851448950255909 IDR reproducibility 667626868782164308->8925851448950255909 -450090753727543174 Overlap Peak ppr -3792436859097688133->-450090753727543174 -450090753727543174->3082324640366304261 -1027389854945324702 JSD Plot 5645640613019116484->-1027389854945324702

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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