File table

Expand all    Collapse all

Files	Path
Alignment
Control 1
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF585IQN.tagAlign.gz
Control 10
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-9/glob-199637d3015dccbe277f621a18be9eb4/ENCFF919EDN.tagAlign.gz
Control 11
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-10/glob-199637d3015dccbe277f621a18be9eb4/ENCFF489ERC.tagAlign.gz
Control 12
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-11/glob-199637d3015dccbe277f621a18be9eb4/ENCFF533HJT.tagAlign.gz
Control 13
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-12/glob-199637d3015dccbe277f621a18be9eb4/ENCFF451CVJ.tagAlign.gz
Control 14
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-13/glob-199637d3015dccbe277f621a18be9eb4/ENCFF383QIP.tagAlign.gz
Control 15
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-14/glob-199637d3015dccbe277f621a18be9eb4/ENCFF905YEA.tagAlign.gz
Control 16
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-15/glob-199637d3015dccbe277f621a18be9eb4/ENCFF785BTW.tagAlign.gz
Control 17
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-16/glob-199637d3015dccbe277f621a18be9eb4/ENCFF709TVD.tagAlign.gz
Control 18
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-17/glob-199637d3015dccbe277f621a18be9eb4/ENCFF928CJD.tagAlign.gz
Control 19
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-18/glob-199637d3015dccbe277f621a18be9eb4/ENCFF528DFI.tagAlign.gz
Control 2
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF847EHD.tagAlign.gz
Control 20
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-19/glob-199637d3015dccbe277f621a18be9eb4/ENCFF482RWP.tagAlign.gz
Control 21
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-20/glob-199637d3015dccbe277f621a18be9eb4/ENCFF736OSY.tagAlign.gz
Control 22
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-21/glob-199637d3015dccbe277f621a18be9eb4/ENCFF490JCT.tagAlign.gz
Control 23
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-22/glob-199637d3015dccbe277f621a18be9eb4/ENCFF856XMU.tagAlign.gz
Control 24
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-23/glob-199637d3015dccbe277f621a18be9eb4/ENCFF949NGG.tagAlign.gz
Control 3
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF800IMV.tagAlign.gz
Control 4
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF190AZK.tagAlign.gz
Control 5
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF500XPF.tagAlign.gz
Control 6
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF654JHZ.tagAlign.gz
Control 7
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-6/glob-199637d3015dccbe277f621a18be9eb4/ENCFF065LBX.tagAlign.gz
Control 8
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-7/glob-199637d3015dccbe277f621a18be9eb4/ENCFF425NTG.tagAlign.gz
Control 9
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-8/glob-199637d3015dccbe277f621a18be9eb4/ENCFF705BZZ.tagAlign.gz
Pooled control
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF336XLE.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF336XLE.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF336XLE.crop_101-2bp.nodup.bam
Raw BAM from aligner	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF336XLE.crop_101-2bp.bam
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF336XLE.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF268OZO.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF268OZO.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF268OZO.crop_101-2bp.nodup.bam
Raw BAM from aligner	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF268OZO.crop_101-2bp.bam
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF268OZO.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.479M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.479M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.479M.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF336XLE.crop_101-2bp.nodup.pr1_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF336XLE.crop_101-2bp.nodup.pr1_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF336XLE.crop_101-2bp.nodup.pr1_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF336XLE.crop_101-2bp.nodup.pr1_x_ctl.pooled.264M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF336XLE.crop_101-2bp.nodup.pr2_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF336XLE.crop_101-2bp.nodup.pr2_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF336XLE.crop_101-2bp.nodup.pr2_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF336XLE.crop_101-2bp.nodup.pr2_x_ctl.pooled.264M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF268OZO.crop_101-2bp.nodup.pr1_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF268OZO.crop_101-2bp.nodup.pr1_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF268OZO.crop_101-2bp.nodup.pr1_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF268OZO.crop_101-2bp.nodup.pr1_x_ctl.pooled.214M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF268OZO.crop_101-2bp.nodup.pr2_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF268OZO.crop_101-2bp.nodup.pr2_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF268OZO.crop_101-2bp.nodup.pr2_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF268OZO.crop_101-2bp.nodup.pr2_x_ctl.pooled.214M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR log	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plot	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.479M.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR log	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plot	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR log	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plot	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF336XLE.crop_101-2bp.nodup.pr1_x_ctl.pooled.264M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF336XLE.crop_101-2bp.nodup.pr2_x_ctl.pooled.264M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plot	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF336XLE.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation score	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF336XLE.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF336XLE.crop_101-2bp.dup.qc
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF336XLE.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF336XLE.crop_101-2bp.samstats.qc
SAMstats log for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF336XLE.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR log	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plot	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF268OZO.crop_101-2bp.nodup.pr1_x_ctl.pooled.214M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF268OZO.crop_101-2bp.nodup.pr2_x_ctl.pooled.214M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plot	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF268OZO.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation score	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF268OZO.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF268OZO.crop_101-2bp.dup.qc
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF268OZO.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF268OZO.crop_101-2bp.samstats.qc
SAMstats log for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF268OZO.crop_101-2bp.nodup.samstats.qc
Final HTML report	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON file	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plot	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF336XLE.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaks	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaks	gs://encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.479M.fc.signal.bigwig
MACS2 signal track (p-val)	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.479M.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.fc.signal.bigwig
MACS2 signal track (p-val)	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.fc.signal.bigwig
MACS2 signal track (p-val)	gs://encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.pval.signal.bigwig

track type=bigWig name="MACS2 p-val (rep1)" priority=1 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.pval.signal.bigwig?Expires=1601333660&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=CC%2BCpKnDZVwDPyaN4i%2BPRKnf6btpPvKxdhNMK6xoIQ3rI6KWDZoYN4LXPeETcr0kue9dijzVsmXdAjOFnP5xNWMjorw%2Fn%2Bes%2BbAL%2BMh5q2luYa3dgcHUV7GVA%2FCAaqJTHed%2FzV6G047KtfxRBU3bixGydRy2bF9a9t53sz0spUlQmbD0ixWW3dS6%2B%2B9TllMWvcU74oWSor4wd1lsSsKF6Bm2OAuIkmaB5PJ9GfZTuma5PtOfh1d1bYBuqfkwR4E6auCZblxdwBfIphRvxL8nW%2BnkZhBOrCnP5MfNPfH3ffwq9ze2f06wb%2FN%2Ft3pKNnrAAITxgfWbJfRS%2BSYTXF8CTw%3D%3D"
track type=bigWig name="MACS2 p-val (rep2)" priority=2 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.pval.signal.bigwig?Expires=1601333660&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=hXPCKy0ZKeTh%2BNzBMDXZPGI4OaDHdiUv%2FIKJmDwyViDXRfABPRPUp2rC9Thg%2F4SNSmr85FbavakPx0NuktGiqHAl9ZCofjokmqYDlFC2kDbYQO3ryzQlXza0FembVqVUTmJtkgXOZgN0hLIaGeG9RFRSTW3z1rReGR7Ex3n19qHZ5g0tOHzScvBEX88i2a15okeoS6zPwsXwcFPMUbhVsZVVk4UIqNL7%2BSEqBR6em%2BGGjwCO%2FBByqbrUx0f%2BiBx8nCAjL94HuPCDH36DrbVuL5l88RRBquabbmkh5ryUALqy2UCNbzk7rK0BFBn8Pm%2BKQ35RLIqYNo7%2ByUZ9La6gJQ%3D%3D"
track type=bigWig name="MACS2 fc (rep1)" priority=1 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF336XLE.crop_101-2bp.nodup_x_ctl.pooled.264M.fc.signal.bigwig?Expires=1601333661&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=m9TdXTr96dCBNU4tKi8s9lkRVWlx2RzydTuroJ7ppWpjEnPEdOi0jPslXaSfS77alcAP7WvHV8X9n9MX4O2zAuACvincjRJ6fgb%2BGNI%2BcHuNaCzr9rD3yBBJLMqa0fUkHNiePRyRjWZXGVM9B8YrZi%2BrCXAYnmgMmhxYqwnS2gM9yOPXXAZAM2qjPIePjBK6Tf76MAPoqjXvMbl61kLmIXIcaOIY6lUDyXQaWwh7ST0MKbifuL5o5vGER0WhdIsfeUUdl0fST8BVkmmrenSIU2gzXfFNA3k9Y37ozq7rK4dxvfWiPEYR12VSH%2BMes%2Fh2fAw%2FLZNAUxiRuh210ZWucw%3D%3D"
track type=bigWig name="MACS2 fc (rep2)" priority=2 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF268OZO.crop_101-2bp.nodup_x_ctl.pooled.214M.fc.signal.bigwig?Expires=1601333661&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=JawVm3iQzUcs1OZOEtAevyPvm7mKptqSS05m8%2FXcuVctovjCXe7zF%2BIfQUAKfjFf%2BkpbbFUpAtPndiT4a%2Fm5RZrwvGfgQGLF%2BmXIRqAi4wIPPrEuy7newtQ0gObYrEOvg7NnHloYhHvgRE15cBI19BQtS8ofPjb%2FPiNjBQtM39FGgc9XbFLjiWguIMt06SBnw%2BRu5N2LVClh47ZSxeHSzRSFZi%2B2E3vkHFIRrjr54ZZ639rhkLw7yqHKYRGeWUmeYjc58SnBlfVyqUtHgULdUWlvV54chDPGeJhbkMJ75o5kQQIX%2FR1eV8D7haOlms3MCUqS0uadbdm2imCEnteFnA%3D%3D"
track type=bigWig name="MACS2 p-val (pooled)" priority=0 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.479M.pval.signal.bigwig?Expires=1601333661&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=bXCoIlWdPTaojlAIgSaqxjAPOJxXuUVtpTeLFtFeclIyDf9AHPvPC7vBSMSipazcMjABq%2Fuadmciqv6thK8NbVvI4m8nT43qBSUK3ggnTLbm4VglNBiK%2BITR7LlbWlSRMoh9N3yBMdkx9WwCSlLODdcxc%2BfJNweHoLjtcvGFp%2B%2FUvE0DuyA%2FCdTN5uXp3u3ks2lwQ7ouYvS9nW%2F4Zs5afi8toJ3tCCVgktXZiGjSNhxzj3Tlp8dfpG4MhwQRFYUTF6d70Os%2BP5FUBCPu5zxp17%2FuIQxMxPveREP3gtKlZLANrsLgwWZDY%2FuQ2Enb959h8JLjtnpq1YK%2FN7mjd52v0Q%3D%3D"
track type=bigWig name="MACS2 fc (pooled)" priority=0 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/0e24cb13-d526-450b-afe9-5d9b097ac3e6/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.479M.fc.signal.bigwig?Expires=1601333661&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=y9xKbqzNhIPm3VGdhbPU7ZerXLEK9ZaP8jSIX2E0ZwYAvcIOaOhqCYrvHIbnnFv%2BxQTSITDm9OS9Kf1JnqWN5MTTnKo3RYphTchlxEBVE3VCsVs10UxLf8ZdeVXQVyupcx2cOQoI8GaHt8wRr63wZUt9CoPcWYH%2Ffu85yETG8LtFxvJVABbs3jPavHUFsKtBaVFjyILYEubsZ6nubp%2F5IDQIBhffVMFb8pat5wHm%2FGfj3dZokXX3epZPLRIbIRAyIYVjHsgirZk3PAOJJNmQAXIGFvZqxcLfoLKkDQcRsrsaohFZZtY9w0r%2B2k7isgCFIjKS5RjjM1eyWU74RTDDMQ%3D%3D"
track type=bigBed name="Optimal IDR peak" priority=100 color=0,0,255 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb?Expires=1601333668&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=azZmQ2HpTIbwR8KIPwLLvIeWLKb2s%2BO0cNSGUamjFhlSEfh00EsI8LF6AuxbIo2xGTtP4qAYMhSoF6VbYEIOqF3e5onq7AR6wxlxeqLIMyMD261A6DrzIyejwkSmLNZJ2%2BFy8Y6R6nCH9JxqQ2o78JlROOojp5lpY4bnWI1%2FA6KjXiAITUcR6zoQSSjyxacpcdl3eQ9MfXvhr5D7HWlAg3UMh0uuMFzqQ5%2B2l5UWrZ04B%2Bloq%2BqlZvgbma%2BjC6iMmM%2BAGRhWvWVwT8B1TWAHf%2FfpiuX%2BWwOKmBDp87jWuBvhgVcjcD2fpeKuoR6onZI3ppGKMJq%2BiFPzPb7nAj3Mkw%3D%3D"
track type=bigBed name="Conservative IDR peak" priority=100 color=0,0,255 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb?Expires=1601333669&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=G9sEBNVYRmJ3ltZvM3lfFyk6RteIuONSJnEj2ydo8W3%2Bwg8Ub4MUi9YqwcIXhsMjooPGRDpM81218HzAmXFE8Fl%2FqZKfXWAONyWzgC7Y7%2FpXWakjWegedo%2BC5dUQnJ%2FAj9gMTtofIGZJxzDOVPG%2BbB5vAQbdGrvP4NBSFZZVBQb30%2FRZoC%2BRhVVxltuBZXSZJc6xcERuROUgA5OS1w752t5xyfamEVCjwiVCsMxJMNbKsDL%2BbZNtdzo6KG7waoWwKVr%2B%2FREbRnWHCrJBYaYeEqm1rTHobNAqqPtCYUVV5WHVO6fS5XpyCZthjwYZ1uWqc%2FfyRq2lpLIGODrEaFev%2BQ%3D%3D"
track type=bigBed name="Optimal overlap peak" priority=100 color=0,0,255 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb?Expires=1601333669&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=oNYXIzfZu9cBqrNorVnRHS53mpfI%2FyrTaK72qUwPaiUYryjIFpPsrMMMOTcxkQ9d2TaY1plBoe513q25Q7MDpa3C6pW9k1cwO%2BBOnVm4Om644l4PjAgFBP0KHNKXKdWiFbyZcyStoL99KRcc%2BTifh7VecjVuo3e%2FIzjxGhMdgWSIjt7QGzH04GUI3BDQ%2BcZbBfj%2FOQF3JVe7op%2Bo5g0pL99%2F7KjkcKZgLU4fiuu5bzbc2%2F2yPIFZyWzXAjxODviOxPos5J3dV28QfJkKC4RRuog4tPIaJ%2BPVPiSkUztxARmgYr83ERUTw7j2GjoOtt5jqBTKwvRJHduRI%2BrBrBkUpA%3D%3D"
track type=bigBed name="Conservative overlap peak" priority=100 color=0,0,255 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/9afa2927-24fb-4403-8628-9c8c487f929a/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb?Expires=1601333670&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=sjo74UcsLiqwJPO3IQ1wRha8xp43eoUj9VwUMxNpeLmnkoOz9nQ%2BXAv8BjwAABQily4DsR6r%2B3CwimEmzeeQZhjhZnSJFqcH7OVlibH9gV3bOmDB2gbHdcooh4WlAf2hHnITGTczvHkxtzgWTRKF0W3CvHO9vVu9fxgNw6LCC2ON1ctI9ZQ5kEVv1PiTmRaiUb%2BRFk55oWUMwVhF0bfm0eEmNV3ePaHwRUF1Mb%2FxyI5nYVUE%2FXKteaGaZdoDcGCD1DgjCiuW9dRtEXdnzIpdShKhoTdYWhh79PA%2FtKpF4ACT4E2PnDamvd6DbgxmVzr6zSC4IEtQElV3PuNlSCrumw%3D%3D"