File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c3548036-7f18-4bdd-9223-fea062e056df/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF050OAR.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF050OAR.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF050OAR.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF050OAR.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF050OAR.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF333MEA.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF333MEA.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF333MEA.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF333MEA.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF333MEA.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF050OAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF050OAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF050OAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF050OAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF050OAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF050OAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF050OAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF050OAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF050OAR.crop_101-2bp.nodup_x_ctl.pooled.298M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF050OAR.crop_101-2bp.nodup_x_ctl.pooled.298M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF050OAR.crop_101-2bp.nodup_x_ctl.pooled.298M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF050OAR.crop_101-2bp.nodup_x_ctl.pooled.298M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF333MEA.crop_101-2bp.nodup.pr1_x_ctl.pooled.368M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF333MEA.crop_101-2bp.nodup.pr1_x_ctl.pooled.368M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF333MEA.crop_101-2bp.nodup.pr1_x_ctl.pooled.368M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF333MEA.crop_101-2bp.nodup.pr1_x_ctl.pooled.368M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF333MEA.crop_101-2bp.nodup.pr2_x_ctl.pooled.368M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF333MEA.crop_101-2bp.nodup.pr2_x_ctl.pooled.368M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF333MEA.crop_101-2bp.nodup.pr2_x_ctl.pooled.368M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF333MEA.crop_101-2bp.nodup.pr2_x_ctl.pooled.368M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF333MEA.crop_101-2bp.nodup_x_ctl.pooled.368M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF333MEA.crop_101-2bp.nodup_x_ctl.pooled.368M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF333MEA.crop_101-2bp.nodup_x_ctl.pooled.368M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF333MEA.crop_101-2bp.nodup_x_ctl.pooled.368M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF050OAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.298M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF050OAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.298M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF050OAR.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF050OAR.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF050OAR.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF050OAR.crop_101-2bp.nodup_x_ctl.pooled.298M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF050OAR.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF050OAR.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF050OAR.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF333MEA.crop_101-2bp.nodup.pr1_x_ctl.pooled.368M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF333MEA.crop_101-2bp.nodup.pr2_x_ctl.pooled.368M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF333MEA.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF333MEA.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF333MEA.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF333MEA.crop_101-2bp.nodup_x_ctl.pooled.368M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF333MEA.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF333MEA.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF333MEA.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/92a0a5de-1e2a-4e62-a1d7-6636a96cd6f9/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF050OAR.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF050OAR.crop_101-2bp.nodup_x_ctl.pooled.298M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF050OAR.crop_101-2bp.nodup_x_ctl.pooled.298M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF333MEA.crop_101-2bp.nodup_x_ctl.pooled.368M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/47177f26-e380-45ad-92f6-40fae29cfec1/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF333MEA.crop_101-2bp.nodup_x_ctl.pooled.368M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 1934852512718648102 chip.macs2_signal_track_pooled -6804736109947584480 BW FC 1934852512718648102->-6804736109947584480 5787922061676691828 BW p-val 1934852512718648102->5787922061676691828 7276944859910831971 chip.call_peak_pooled 7527132042609211585 Peak (bfilt) 7276944859910831971->7527132042609211585 -7643343616972939396 Peak 7276944859910831971->-7643343616972939396 -2014019967163271325 chip.idr_ppr -7643343616972939396->-2014019967163271325 6216491428316217517 chip.idr -7643343616972939396->6216491428316217517 1252223858511515157 chip.overlap -7643343616972939396->1252223858511515157 1286084408934984594 chip.overlap_ppr -7643343616972939396->1286084408934984594 4852814548496227593 chip.pool_ta -8931988505506015867 TAG-ALIGN 4852814548496227593->-8931988505506015867 -8931988505506015867->1934852512718648102 -8931988505506015867->7276944859910831971 -8931988505506015867->-2014019967163271325 -8931988505506015867->6216491428316217517 -8931988505506015867->1252223858511515157 -8931988505506015867->1286084408934984594 4516673196321844322 chip.call_peak 789457207228095074 Peak (bfilt) 4516673196321844322->789457207228095074 3308750605876870622 Peak 4516673196321844322->3308750605876870622 3308750605876870622->6216491428316217517 3308750605876870622->1252223858511515157 -1886157846121523005 chip.reproducibility_overlap 3308750605876870622->-1886157846121523005 7779017228462240727 chip.reproducibility_idr 3308750605876870622->7779017228462240727 -2715187055056683881 chip.bam2ta 3671370833891393398 TAG-ALIGN -2715187055056683881->3671370833891393398 3671370833891393398->4852814548496227593 3671370833891393398->4516673196321844322 6306300858586128241 chip.macs2_signal_track 3671370833891393398->6306300858586128241 3671370833891393398->-2014019967163271325 3671370833891393398->-1886157846121523005 3671370833891393398->7779017228462240727 3671370833891393398->1286084408934984594 -523773488091832792 chip.filter -1586848939429460252 SAMstats QC -523773488091832792->-1586848939429460252 -6700483216820339300 Filt/deduped BAM -523773488091832792->-6700483216820339300 4154321589786294504 LibCmplx QC -523773488091832792->4154321589786294504 -6700483216820339300->-2715187055056683881 -3589559630444412018 chip.jsd -6700483216820339300->-3589559630444412018 -7158400579349961613 chip.align -1331254081212847511 SAMstats QC -7158400579349961613->-1331254081212847511 -5353917249498920107 BAM -7158400579349961613->-5353917249498920107 -5353917249498920107->-523773488091832792 -3052216928541741194 chip.xcor 3426047830245116990 XCOR Plot -3052216928541741194->3426047830245116990 1816686040277745985 BW FC 6306300858586128241->1816686040277745985 777820291390334262 BW p-val 6306300858586128241->777820291390334262 -218578254819932518 FASTQ R1 (1) -218578254819932518->-7158400579349961613 -218578254819932518->-3052216928541741194 -5103940989622089638 FASTQ R2 (1) -5103940989622089638->-7158400579349961613 1967140036662825479 chip.call_peak -6099322134793374045 Peak (bfilt) 1967140036662825479->-6099322134793374045 -5197600531494893347 Peak 1967140036662825479->-5197600531494893347 -5197600531494893347->6216491428316217517 -5197600531494893347->1252223858511515157 -5197600531494893347->-1886157846121523005 -5197600531494893347->7779017228462240727 -1770706211767272782 chip.bam2ta -7020875072134150823 TAG-ALIGN -1770706211767272782->-7020875072134150823 -7020875072134150823->4852814548496227593 -7020875072134150823->1967140036662825479 -227274441291782712 chip.macs2_signal_track -7020875072134150823->-227274441291782712 -7020875072134150823->-2014019967163271325 -7020875072134150823->-1886157846121523005 -7020875072134150823->7779017228462240727 -7020875072134150823->1286084408934984594 -8149828028284597883 chip.filter -202362695614214998 SAMstats QC -8149828028284597883->-202362695614214998 5704640903671188199 Filt/deduped BAM -8149828028284597883->5704640903671188199 -5359801621054264466 LibCmplx QC -8149828028284597883->-5359801621054264466 5704640903671188199->-1770706211767272782 5704640903671188199->-3589559630444412018 -8599950149028047592 chip.align 7192252637343862782 SAMstats QC -8599950149028047592->7192252637343862782 -6379102261270146 BAM -8599950149028047592->-6379102261270146 -6379102261270146->-8149828028284597883 3947219316747176166 chip.xcor 3564333389308981009 XCOR Plot 3947219316747176166->3564333389308981009 -458180405063279738 BW FC -227274441291782712->-458180405063279738 1228920128893534711 BW p-val -227274441291782712->1228920128893534711 6717569107232129977 FASTQ R1 (1) 6717569107232129977->-8599950149028047592 6717569107232129977->3947219316747176166 8861843492046996215 FASTQ R2 (1) 8861843492046996215->-8599950149028047592 20204392980103558 chip.pool_ta_ctl 5803643077111278125 TAG-ALIGN 20204392980103558->5803643077111278125 5803643077111278125->1934852512718648102 5803643077111278125->7276944859910831971 5803643077111278125->4516673196321844322 5803643077111278125->6306300858586128241 5803643077111278125->1967140036662825479 5803643077111278125->-227274441291782712 5803643077111278125->-2014019967163271325 5803643077111278125->-1886157846121523005 5803643077111278125->7779017228462240727 5803643077111278125->1286084408934984594 4710112147864765804 chip.bam2ta_ctl -3497897393794745052 TAG-ALIGN 4710112147864765804->-3497897393794745052 -3497897393794745052->20204392980103558 113436504272871242 Filt/deduped BAM 113436504272871242->4710112147864765804 113436504272871242->-3589559630444412018 -2643721111189546981 chip.bam2ta_ctl -7669477177408954874 TAG-ALIGN -2643721111189546981->-7669477177408954874 -7669477177408954874->20204392980103558 -6811448901288688924 Filt/deduped BAM -6811448901288688924->-2643721111189546981 -6811448901288688924->-3589559630444412018 3331887259352078628 chip.bam2ta_ctl 7124147364859070442 TAG-ALIGN 3331887259352078628->7124147364859070442 7124147364859070442->20204392980103558 -7029648908400943122 Filt/deduped BAM -7029648908400943122->3331887259352078628 -7029648908400943122->-3589559630444412018 6042262311015116173 chip.bam2ta_ctl 8206362861631555880 TAG-ALIGN 6042262311015116173->8206362861631555880 8206362861631555880->20204392980103558 813648463171084266 Filt/deduped BAM 813648463171084266->6042262311015116173 813648463171084266->-3589559630444412018 7528357378388739507 chip.bam2ta_ctl 6079419461816246517 TAG-ALIGN 7528357378388739507->6079419461816246517 6079419461816246517->20204392980103558 -1449413333422126734 Filt/deduped BAM -1449413333422126734->7528357378388739507 -1449413333422126734->-3589559630444412018 3101728353824834873 chip.bam2ta_ctl -4758333172761493393 TAG-ALIGN 3101728353824834873->-4758333172761493393 -4758333172761493393->20204392980103558 -7442851155642393351 Filt/deduped BAM -7442851155642393351->3101728353824834873 -7442851155642393351->-3589559630444412018 -1638705724025986289 IDR Plot ppr -2014019967163271325->-1638705724025986289 -1997117763209890132 IDR Peak ppr -2014019967163271325->-1997117763209890132 -1997117763209890132->7779017228462240727 -9048126214632195790 IDR Plot rep1_vs_rep2 6216491428316217517->-9048126214632195790 -4274653501247288457 IDR NPeak rep1_vs_rep2 6216491428316217517->-4274653501247288457 -4274653501247288457->7779017228462240727 2817840898626974917 Overlap Peak rep1_vs_rep2 1252223858511515157->2817840898626974917 2817840898626974917->-1886157846121523005 1982255341628706862 Overlap Peak optimal -1886157846121523005->1982255341628706862 779811134442857712 Overlap reproducibility -1886157846121523005->779811134442857712 640597901876342286 IDR Peak optimal 7779017228462240727->640597901876342286 3449949699951205571 IDR reproducibility 7779017228462240727->3449949699951205571 -7469964100416652460 Overlap Peak ppr 1286084408934984594->-7469964100416652460 -7469964100416652460->-1886157846121523005 8647997551654251957 JSD Plot -3589559630444412018->8647997551654251957

UCSC browser tracks

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UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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