File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c3548036-7f18-4bdd-9223-fea062e056df/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/9d5f1544-2a4e-4424-b179-6b1d49ca1d65/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF095MZW.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF095MZW.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF095MZW.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF095MZW.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF095MZW.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF074LAP.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF074LAP.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF074LAP.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF074LAP.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF074LAP.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF095MZW.crop_101-2bp.nodup.pr1_x_ctl.pooled.260M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF095MZW.crop_101-2bp.nodup.pr1_x_ctl.pooled.260M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF095MZW.crop_101-2bp.nodup.pr1_x_ctl.pooled.260M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF095MZW.crop_101-2bp.nodup.pr1_x_ctl.pooled.260M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF095MZW.crop_101-2bp.nodup.pr2_x_ctl.pooled.260M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF095MZW.crop_101-2bp.nodup.pr2_x_ctl.pooled.260M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF095MZW.crop_101-2bp.nodup.pr2_x_ctl.pooled.260M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF095MZW.crop_101-2bp.nodup.pr2_x_ctl.pooled.260M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF095MZW.crop_101-2bp.nodup_x_ctl.pooled.260M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF095MZW.crop_101-2bp.nodup_x_ctl.pooled.260M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF095MZW.crop_101-2bp.nodup_x_ctl.pooled.260M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF095MZW.crop_101-2bp.nodup_x_ctl.pooled.260M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF074LAP.crop_101-2bp.nodup.pr1_x_ctl.pooled.306M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF074LAP.crop_101-2bp.nodup.pr1_x_ctl.pooled.306M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF074LAP.crop_101-2bp.nodup.pr1_x_ctl.pooled.306M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF074LAP.crop_101-2bp.nodup.pr1_x_ctl.pooled.306M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF074LAP.crop_101-2bp.nodup.pr2_x_ctl.pooled.306M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF074LAP.crop_101-2bp.nodup.pr2_x_ctl.pooled.306M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF074LAP.crop_101-2bp.nodup.pr2_x_ctl.pooled.306M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF074LAP.crop_101-2bp.nodup.pr2_x_ctl.pooled.306M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF074LAP.crop_101-2bp.nodup_x_ctl.pooled.306M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF074LAP.crop_101-2bp.nodup_x_ctl.pooled.306M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF074LAP.crop_101-2bp.nodup_x_ctl.pooled.306M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF074LAP.crop_101-2bp.nodup_x_ctl.pooled.306M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF095MZW.crop_101-2bp.nodup.pr1_x_ctl.pooled.260M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF095MZW.crop_101-2bp.nodup.pr2_x_ctl.pooled.260M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF095MZW.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF095MZW.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF095MZW.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF095MZW.crop_101-2bp.nodup_x_ctl.pooled.260M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF095MZW.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF095MZW.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF095MZW.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF074LAP.crop_101-2bp.nodup.pr1_x_ctl.pooled.306M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF074LAP.crop_101-2bp.nodup.pr2_x_ctl.pooled.306M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF074LAP.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF074LAP.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF074LAP.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF074LAP.crop_101-2bp.nodup_x_ctl.pooled.306M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF074LAP.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF074LAP.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF074LAP.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF095MZW.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF095MZW.crop_101-2bp.nodup_x_ctl.pooled.260M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF095MZW.crop_101-2bp.nodup_x_ctl.pooled.260M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF074LAP.crop_101-2bp.nodup_x_ctl.pooled.306M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/84c8f28a-a8c4-4723-bf2c-fefef09c64f1/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF074LAP.crop_101-2bp.nodup_x_ctl.pooled.306M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 1551163222694249707 chip.macs2_signal_track_pooled -5968351800984756294 BW FC 1551163222694249707->-5968351800984756294 -3883970851387324129 BW p-val 1551163222694249707->-3883970851387324129 -5069301066791945912 chip.call_peak_pooled -3093245678539575420 Peak (bfilt) -5069301066791945912->-3093245678539575420 -8675985617695327263 Peak -5069301066791945912->-8675985617695327263 2941325101386629309 chip.idr_ppr -8675985617695327263->2941325101386629309 -7644394580452540731 chip.idr -8675985617695327263->-7644394580452540731 -2606120916837373321 chip.overlap -8675985617695327263->-2606120916837373321 3682374308383932362 chip.overlap_ppr -8675985617695327263->3682374308383932362 4807463263128172312 chip.pool_ta 7304191955757434130 TAG-ALIGN 4807463263128172312->7304191955757434130 7304191955757434130->1551163222694249707 7304191955757434130->-5069301066791945912 7304191955757434130->2941325101386629309 7304191955757434130->-7644394580452540731 7304191955757434130->-2606120916837373321 7304191955757434130->3682374308383932362 2761287155929079326 chip.call_peak 4451545829300326731 Peak (bfilt) 2761287155929079326->4451545829300326731 -8328515829376397670 Peak 2761287155929079326->-8328515829376397670 -8328515829376397670->-7644394580452540731 -8328515829376397670->-2606120916837373321 -3092564137775918202 chip.reproducibility_overlap -8328515829376397670->-3092564137775918202 7411376069699557959 chip.reproducibility_idr -8328515829376397670->7411376069699557959 -4498874033774626452 chip.bam2ta 2822870284341417679 TAG-ALIGN -4498874033774626452->2822870284341417679 2822870284341417679->4807463263128172312 2822870284341417679->2761287155929079326 6544496848557193769 chip.macs2_signal_track 2822870284341417679->6544496848557193769 2822870284341417679->2941325101386629309 2822870284341417679->-3092564137775918202 2822870284341417679->7411376069699557959 2822870284341417679->3682374308383932362 -249137030358748779 chip.filter 2077678938824823678 SAMstats QC -249137030358748779->2077678938824823678 1823718009875072793 Filt/deduped BAM -249137030358748779->1823718009875072793 5593712830923734591 LibCmplx QC -249137030358748779->5593712830923734591 1823718009875072793->-4498874033774626452 3590900289640475379 chip.jsd 1823718009875072793->3590900289640475379 -555667006149399606 chip.align 5369715099459097290 SAMstats QC -555667006149399606->5369715099459097290 3186652437016087579 BAM -555667006149399606->3186652437016087579 3186652437016087579->-249137030358748779 -5998298647892653670 chip.xcor -2051656301731832679 XCOR Plot -5998298647892653670->-2051656301731832679 6819210764782709564 BW FC 6544496848557193769->6819210764782709564 8180938361669502126 BW p-val 6544496848557193769->8180938361669502126 7638991475494722940 FASTQ R1 (1) 7638991475494722940->-555667006149399606 7638991475494722940->-5998298647892653670 2352404469601156191 FASTQ R2 (1) 2352404469601156191->-555667006149399606 -8771197088845878272 chip.call_peak 2798813250958374356 Peak (bfilt) -8771197088845878272->2798813250958374356 -8451050782205070691 Peak -8771197088845878272->-8451050782205070691 -8451050782205070691->-7644394580452540731 -8451050782205070691->-2606120916837373321 -8451050782205070691->-3092564137775918202 -8451050782205070691->7411376069699557959 -5684511525483931872 chip.bam2ta 555655785674163266 TAG-ALIGN -5684511525483931872->555655785674163266 555655785674163266->4807463263128172312 555655785674163266->-8771197088845878272 9171314910681221069 chip.macs2_signal_track 555655785674163266->9171314910681221069 555655785674163266->2941325101386629309 555655785674163266->-3092564137775918202 555655785674163266->7411376069699557959 555655785674163266->3682374308383932362 2923822546543457413 chip.filter 9007532563210136555 SAMstats QC 2923822546543457413->9007532563210136555 -7906951426228316931 Filt/deduped BAM 2923822546543457413->-7906951426228316931 -5294900428079666314 LibCmplx QC 2923822546543457413->-5294900428079666314 -7906951426228316931->-5684511525483931872 -7906951426228316931->3590900289640475379 -64744459827323721 chip.align -6158329949932222668 SAMstats QC -64744459827323721->-6158329949932222668 5158930552792507359 BAM -64744459827323721->5158930552792507359 5158930552792507359->2923822546543457413 -2922552024247149521 chip.xcor 3092141979371663343 XCOR Plot -2922552024247149521->3092141979371663343 -1758278733732145004 BW p-val 9171314910681221069->-1758278733732145004 5225404227595819489 BW FC 9171314910681221069->5225404227595819489 4358116287729474054 FASTQ R1 (1) 4358116287729474054->-64744459827323721 4358116287729474054->-2922552024247149521 1615625011807338571 FASTQ R2 (1) 1615625011807338571->-64744459827323721 -7563864923534823443 chip.pool_ta_ctl 3890714887084069141 TAG-ALIGN -7563864923534823443->3890714887084069141 3890714887084069141->1551163222694249707 3890714887084069141->-5069301066791945912 3890714887084069141->2761287155929079326 3890714887084069141->6544496848557193769 3890714887084069141->-8771197088845878272 3890714887084069141->9171314910681221069 3890714887084069141->2941325101386629309 3890714887084069141->-3092564137775918202 3890714887084069141->7411376069699557959 3890714887084069141->3682374308383932362 -4745985276649369342 chip.bam2ta_ctl 7418409847489903684 TAG-ALIGN -4745985276649369342->7418409847489903684 7418409847489903684->-7563864923534823443 -536358051035208808 Filt/deduped BAM -536358051035208808->-4745985276649369342 -536358051035208808->3590900289640475379 9185290487186454946 chip.bam2ta_ctl 829974153053691638 TAG-ALIGN 9185290487186454946->829974153053691638 829974153053691638->-7563864923534823443 -1896678638991113091 Filt/deduped BAM -1896678638991113091->9185290487186454946 -1896678638991113091->3590900289640475379 -8381306395372183192 chip.bam2ta_ctl 3141118036767105186 TAG-ALIGN -8381306395372183192->3141118036767105186 3141118036767105186->-7563864923534823443 7233608776973397966 Filt/deduped BAM 7233608776973397966->-8381306395372183192 7233608776973397966->3590900289640475379 -6816358268761804441 chip.bam2ta_ctl -4771577530252691430 TAG-ALIGN -6816358268761804441->-4771577530252691430 -4771577530252691430->-7563864923534823443 533037525454734358 Filt/deduped BAM 533037525454734358->-6816358268761804441 533037525454734358->3590900289640475379 3561974842272140677 chip.bam2ta_ctl 4387207171897131007 TAG-ALIGN 3561974842272140677->4387207171897131007 4387207171897131007->-7563864923534823443 5487319262912047622 Filt/deduped BAM 5487319262912047622->3561974842272140677 5487319262912047622->3590900289640475379 3485298388696802634 chip.bam2ta_ctl 8627160483135344390 TAG-ALIGN 3485298388696802634->8627160483135344390 8627160483135344390->-7563864923534823443 -6128816338841067967 Filt/deduped BAM -6128816338841067967->3485298388696802634 -6128816338841067967->3590900289640475379 5388914554376045910 IDR Plot ppr 2941325101386629309->5388914554376045910 -8007734727585413902 IDR Peak ppr 2941325101386629309->-8007734727585413902 -8007734727585413902->7411376069699557959 7841224750403050494 IDR Plot rep1_vs_rep2 -7644394580452540731->7841224750403050494 4806587588520139205 IDR NPeak rep1_vs_rep2 -7644394580452540731->4806587588520139205 4806587588520139205->7411376069699557959 7605113905192475806 Overlap Peak rep1_vs_rep2 -2606120916837373321->7605113905192475806 7605113905192475806->-3092564137775918202 -6918479377254262050 Overlap Peak optimal -3092564137775918202->-6918479377254262050 -1464654126221520552 Overlap reproducibility -3092564137775918202->-1464654126221520552 1983856442321472384 IDR Peak optimal 7411376069699557959->1983856442321472384 7252555283397954917 IDR reproducibility 7411376069699557959->7252555283397954917 4643911250709007174 Overlap Peak ppr 3682374308383932362->4643911250709007174 4643911250709007174->-3092564137775918202 -7884138555932897434 JSD Plot 3590900289640475379->-7884138555932897434

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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