File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/a10a7070-199d-46a9-86eb-c50f7d7322b1/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c4a44d6b-9471-4ee2-9b0e-6cdd4e5fc01e/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF243REJ.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF243REJ.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF243REJ.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF243REJ.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF243REJ.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF632RYD.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF632RYD.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF632RYD.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF632RYD.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF632RYD.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF243REJ.crop_101-2bp.nodup.pr1_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF243REJ.crop_101-2bp.nodup.pr1_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF243REJ.crop_101-2bp.nodup.pr1_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF243REJ.crop_101-2bp.nodup.pr1_x_ctl.pooled.259M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF243REJ.crop_101-2bp.nodup.pr2_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF243REJ.crop_101-2bp.nodup.pr2_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF243REJ.crop_101-2bp.nodup.pr2_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF243REJ.crop_101-2bp.nodup.pr2_x_ctl.pooled.259M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF243REJ.crop_101-2bp.nodup_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF243REJ.crop_101-2bp.nodup_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF243REJ.crop_101-2bp.nodup_x_ctl.pooled.259M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF243REJ.crop_101-2bp.nodup_x_ctl.pooled.259M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF632RYD.crop_101-2bp.nodup.pr1_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF632RYD.crop_101-2bp.nodup.pr1_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF632RYD.crop_101-2bp.nodup.pr1_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF632RYD.crop_101-2bp.nodup.pr1_x_ctl.pooled.269M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF632RYD.crop_101-2bp.nodup.pr2_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF632RYD.crop_101-2bp.nodup.pr2_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF632RYD.crop_101-2bp.nodup.pr2_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF632RYD.crop_101-2bp.nodup.pr2_x_ctl.pooled.269M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF632RYD.crop_101-2bp.nodup_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF632RYD.crop_101-2bp.nodup_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF632RYD.crop_101-2bp.nodup_x_ctl.pooled.269M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF632RYD.crop_101-2bp.nodup_x_ctl.pooled.269M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF243REJ.crop_101-2bp.nodup.pr1_x_ctl.pooled.259M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF243REJ.crop_101-2bp.nodup.pr2_x_ctl.pooled.259M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF243REJ.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF243REJ.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF243REJ.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF243REJ.crop_101-2bp.nodup_x_ctl.pooled.259M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF243REJ.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF243REJ.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF243REJ.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF632RYD.crop_101-2bp.nodup.pr1_x_ctl.pooled.269M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF632RYD.crop_101-2bp.nodup.pr2_x_ctl.pooled.269M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF632RYD.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF632RYD.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF632RYD.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF632RYD.crop_101-2bp.nodup_x_ctl.pooled.269M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF632RYD.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF632RYD.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF632RYD.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/45952761-9677-476f-822f-cb196411a54b/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF243REJ.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF243REJ.crop_101-2bp.nodup_x_ctl.pooled.259M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF243REJ.crop_101-2bp.nodup_x_ctl.pooled.259M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF632RYD.crop_101-2bp.nodup_x_ctl.pooled.269M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/e6fec404-3f8b-4560-9afc-c0856386207b/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF632RYD.crop_101-2bp.nodup_x_ctl.pooled.269M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 4610930059087873442 chip.macs2_signal_track_pooled -6790161682445775294 BW FC 4610930059087873442->-6790161682445775294 7188568254990040781 BW p-val 4610930059087873442->7188568254990040781 -7408593825287291344 chip.call_peak_pooled -3227066076336590157 Peak (bfilt) -7408593825287291344->-3227066076336590157 -984060572726712601 Peak -7408593825287291344->-984060572726712601 5199856002942927613 chip.idr_ppr -984060572726712601->5199856002942927613 808784697712070756 chip.idr -984060572726712601->808784697712070756 -101617279532804579 chip.overlap -984060572726712601->-101617279532804579 6716223617052854695 chip.overlap_ppr -984060572726712601->6716223617052854695 3132919246749029670 chip.pool_ta 4771488527707592963 TAG-ALIGN 3132919246749029670->4771488527707592963 4771488527707592963->4610930059087873442 4771488527707592963->-7408593825287291344 4771488527707592963->5199856002942927613 4771488527707592963->808784697712070756 4771488527707592963->-101617279532804579 4771488527707592963->6716223617052854695 1656777305707078776 chip.call_peak -8032852778608171459 Peak (bfilt) 1656777305707078776->-8032852778608171459 -8228137513374383059 Peak 1656777305707078776->-8228137513374383059 -8228137513374383059->808784697712070756 -8228137513374383059->-101617279532804579 1639378726117253351 chip.reproducibility_overlap -8228137513374383059->1639378726117253351 8811279875020578315 chip.reproducibility_idr -8228137513374383059->8811279875020578315 7180714989264229900 chip.bam2ta 8025458833787276353 TAG-ALIGN 7180714989264229900->8025458833787276353 8025458833787276353->3132919246749029670 8025458833787276353->1656777305707078776 -4895128840822421155 chip.macs2_signal_track 8025458833787276353->-4895128840822421155 8025458833787276353->5199856002942927613 8025458833787276353->1639378726117253351 8025458833787276353->8811279875020578315 8025458833787276353->6716223617052854695 -9145570540753911978 chip.filter -3641879674417818369 SAMstats QC -9145570540753911978->-3641879674417818369 6482326469775040035 Filt/deduped BAM -9145570540753911978->6482326469775040035 1482068554960223565 LibCmplx QC -9145570540753911978->1482068554960223565 6482326469775040035->7180714989264229900 -7042287925895659681 chip.jsd 6482326469775040035->-7042287925895659681 -6483654558147757362 chip.align 9207438208908616362 SAMstats QC -6483654558147757362->9207438208908616362 -5529093169988267057 BAM -6483654558147757362->-5529093169988267057 -5529093169988267057->-9145570540753911978 64247239905251477 chip.xcor 2088484131571447434 XCOR Plot 64247239905251477->2088484131571447434 1375154649511884156 BW FC -4895128840822421155->1375154649511884156 -924356096061674218 BW p-val -4895128840822421155->-924356096061674218 -560149411244959194 FASTQ R1 (1) -560149411244959194->-6483654558147757362 -560149411244959194->64247239905251477 -4223546330645548487 FASTQ R2 (1) -4223546330645548487->-6483654558147757362 3089185950324733311 chip.call_peak 4466591235657198151 Peak (bfilt) 3089185950324733311->4466591235657198151 2526520565663275335 Peak 3089185950324733311->2526520565663275335 2526520565663275335->808784697712070756 2526520565663275335->-101617279532804579 2526520565663275335->1639378726117253351 2526520565663275335->8811279875020578315 -1212811122873976383 chip.bam2ta 6599575147877123625 TAG-ALIGN -1212811122873976383->6599575147877123625 6599575147877123625->3132919246749029670 6599575147877123625->3089185950324733311 7737651766404841786 chip.macs2_signal_track 6599575147877123625->7737651766404841786 6599575147877123625->5199856002942927613 6599575147877123625->1639378726117253351 6599575147877123625->8811279875020578315 6599575147877123625->6716223617052854695 -6666275590784707218 chip.filter 8541148414919116265 SAMstats QC -6666275590784707218->8541148414919116265 6917786944718610533 Filt/deduped BAM -6666275590784707218->6917786944718610533 -7909223974001571221 LibCmplx QC -6666275590784707218->-7909223974001571221 6917786944718610533->-1212811122873976383 6917786944718610533->-7042287925895659681 7547160339833194099 chip.align -7130049406447523764 SAMstats QC 7547160339833194099->-7130049406447523764 4077871798427851614 BAM 7547160339833194099->4077871798427851614 4077871798427851614->-6666275590784707218 1530213046536465421 chip.xcor 6396942763733449322 XCOR Plot 1530213046536465421->6396942763733449322 8369088408018134368 BW FC 7737651766404841786->8369088408018134368 8084538382297049030 BW p-val 7737651766404841786->8084538382297049030 793296251258978372 FASTQ R1 (1) 793296251258978372->7547160339833194099 793296251258978372->1530213046536465421 -5147642688239686785 FASTQ R2 (1) -5147642688239686785->7547160339833194099 955339416634167281 chip.pool_ta_ctl -5504544928590317 TAG-ALIGN 955339416634167281->-5504544928590317 -5504544928590317->4610930059087873442 -5504544928590317->-7408593825287291344 -5504544928590317->1656777305707078776 -5504544928590317->-4895128840822421155 -5504544928590317->3089185950324733311 -5504544928590317->7737651766404841786 -5504544928590317->5199856002942927613 -5504544928590317->1639378726117253351 -5504544928590317->8811279875020578315 -5504544928590317->6716223617052854695 8411754036380581649 chip.bam2ta_ctl 7382389779099384589 TAG-ALIGN 8411754036380581649->7382389779099384589 7382389779099384589->955339416634167281 6719892033722118249 Filt/deduped BAM 6719892033722118249->8411754036380581649 6719892033722118249->-7042287925895659681 4095403633790866458 chip.bam2ta_ctl -3581486867217620119 TAG-ALIGN 4095403633790866458->-3581486867217620119 -3581486867217620119->955339416634167281 1843684725082659473 Filt/deduped BAM 1843684725082659473->4095403633790866458 1843684725082659473->-7042287925895659681 2142096932621346421 chip.bam2ta_ctl -5036448013820041868 TAG-ALIGN 2142096932621346421->-5036448013820041868 -5036448013820041868->955339416634167281 8113189342796655412 Filt/deduped BAM 8113189342796655412->2142096932621346421 8113189342796655412->-7042287925895659681 -5788351396507663873 chip.bam2ta_ctl -1596583476941116429 TAG-ALIGN -5788351396507663873->-1596583476941116429 -1596583476941116429->955339416634167281 -2388908345054100388 Filt/deduped BAM -2388908345054100388->-5788351396507663873 -2388908345054100388->-7042287925895659681 7301975706110650960 chip.bam2ta_ctl 4024254567996342453 TAG-ALIGN 7301975706110650960->4024254567996342453 4024254567996342453->955339416634167281 -7204361403641601408 Filt/deduped BAM -7204361403641601408->7301975706110650960 -7204361403641601408->-7042287925895659681 1422647667272814411 chip.bam2ta_ctl 1294262171682873793 TAG-ALIGN 1422647667272814411->1294262171682873793 1294262171682873793->955339416634167281 3408427357404886716 Filt/deduped BAM 3408427357404886716->1422647667272814411 3408427357404886716->-7042287925895659681 4947866464953033953 IDR Plot ppr 5199856002942927613->4947866464953033953 2348139261206047476 IDR Peak ppr 5199856002942927613->2348139261206047476 2348139261206047476->8811279875020578315 6082448419737511541 IDR Plot rep1_vs_rep2 808784697712070756->6082448419737511541 -4958138254541856494 IDR NPeak rep1_vs_rep2 808784697712070756->-4958138254541856494 -4958138254541856494->8811279875020578315 4976722173495546654 Overlap Peak rep1_vs_rep2 -101617279532804579->4976722173495546654 4976722173495546654->1639378726117253351 -5463269876268737728 Overlap Peak optimal 1639378726117253351->-5463269876268737728 5018068103450181864 Overlap reproducibility 1639378726117253351->5018068103450181864 8320223127471748981 IDR Peak optimal 8811279875020578315->8320223127471748981 528801306757235438 IDR reproducibility 8811279875020578315->528801306757235438 -4377236877842936368 Overlap Peak ppr 6716223617052854695->-4377236877842936368 -4377236877842936368->1639378726117253351 1422564147337551958 JSD Plot -7042287925895659681->1422564147337551958

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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