File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/a10a7070-199d-46a9-86eb-c50f7d7322b1/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c4a44d6b-9471-4ee2-9b0e-6cdd4e5fc01e/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF197WID.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF197WID.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF197WID.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF197WID.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF197WID.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF421XZN.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF421XZN.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF421XZN.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF421XZN.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF421XZN.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF197WID.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF197WID.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF197WID.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF197WID.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF197WID.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF197WID.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF197WID.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF197WID.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF197WID.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF197WID.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF197WID.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF197WID.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF421XZN.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF421XZN.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF421XZN.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF421XZN.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF421XZN.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF421XZN.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF421XZN.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF421XZN.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF421XZN.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF421XZN.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF421XZN.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF421XZN.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF197WID.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF197WID.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF197WID.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF197WID.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF197WID.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF197WID.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF197WID.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF197WID.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF197WID.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF421XZN.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF421XZN.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF421XZN.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF421XZN.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF421XZN.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF421XZN.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF421XZN.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF421XZN.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF421XZN.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF197WID.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/12cf1665-93bf-4f60-9c21-44558c1ca18f/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF197WID.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF197WID.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF421XZN.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/f59ac135-ba4f-4e9b-adcf-9bda248a49eb/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF421XZN.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 7067391611322475553 chip.macs2_signal_track_pooled -815120206159503706 BW FC 7067391611322475553->-815120206159503706 -460672688049456610 BW p-val 7067391611322475553->-460672688049456610 309547548864115432 chip.call_peak_pooled 4332761647042783594 Peak (bfilt) 309547548864115432->4332761647042783594 5134558998500561509 Peak 309547548864115432->5134558998500561509 -1712868872712626450 chip.idr_ppr 5134558998500561509->-1712868872712626450 -7673814497566436140 chip.idr 5134558998500561509->-7673814497566436140 7841188483763810567 chip.overlap 5134558998500561509->7841188483763810567 -1093951634233721976 chip.overlap_ppr 5134558998500561509->-1093951634233721976 5784201873288516814 chip.pool_ta -2382990379806900954 TAG-ALIGN 5784201873288516814->-2382990379806900954 -2382990379806900954->7067391611322475553 -2382990379806900954->309547548864115432 -2382990379806900954->-1712868872712626450 -2382990379806900954->-7673814497566436140 -2382990379806900954->7841188483763810567 -2382990379806900954->-1093951634233721976 344451518648220976 chip.call_peak -2663304975023814207 Peak (bfilt) 344451518648220976->-2663304975023814207 -5542471836147420968 Peak 344451518648220976->-5542471836147420968 -5542471836147420968->-7673814497566436140 -5542471836147420968->7841188483763810567 7860876123352232517 chip.reproducibility_overlap -5542471836147420968->7860876123352232517 1280814812261523417 chip.reproducibility_idr -5542471836147420968->1280814812261523417 -8217099229491861458 chip.bam2ta 2210019182134812806 TAG-ALIGN -8217099229491861458->2210019182134812806 2210019182134812806->5784201873288516814 2210019182134812806->344451518648220976 4842252304056721066 chip.macs2_signal_track 2210019182134812806->4842252304056721066 2210019182134812806->-1712868872712626450 2210019182134812806->7860876123352232517 2210019182134812806->1280814812261523417 2210019182134812806->-1093951634233721976 -8964336988545693866 chip.filter 1619328458010662173 SAMstats QC -8964336988545693866->1619328458010662173 -7899438266146617371 Filt/deduped BAM -8964336988545693866->-7899438266146617371 7443210995995008738 LibCmplx QC -8964336988545693866->7443210995995008738 -7899438266146617371->-8217099229491861458 -1839742612191801541 chip.jsd -7899438266146617371->-1839742612191801541 4305980502738668456 chip.align -4007236436103953697 SAMstats QC 4305980502738668456->-4007236436103953697 8898944584039900184 BAM 4305980502738668456->8898944584039900184 8898944584039900184->-8964336988545693866 9211155403768627472 chip.xcor -705395882980669430 XCOR Plot 9211155403768627472->-705395882980669430 -8142403603584007199 BW FC 4842252304056721066->-8142403603584007199 -4010428684442284547 BW p-val 4842252304056721066->-4010428684442284547 -5573401656387964173 FASTQ R1 (1) -5573401656387964173->4305980502738668456 -5573401656387964173->9211155403768627472 7923990640128578610 FASTQ R2 (1) 7923990640128578610->4305980502738668456 1533505211230237961 chip.call_peak -6742324640778301720 Peak (bfilt) 1533505211230237961->-6742324640778301720 -7266706442440956986 Peak 1533505211230237961->-7266706442440956986 -7266706442440956986->-7673814497566436140 -7266706442440956986->7841188483763810567 -7266706442440956986->7860876123352232517 -7266706442440956986->1280814812261523417 6726418958999842383 chip.bam2ta 5844837157564096766 TAG-ALIGN 6726418958999842383->5844837157564096766 5844837157564096766->5784201873288516814 5844837157564096766->1533505211230237961 -833847788115793306 chip.macs2_signal_track 5844837157564096766->-833847788115793306 5844837157564096766->-1712868872712626450 5844837157564096766->7860876123352232517 5844837157564096766->1280814812261523417 5844837157564096766->-1093951634233721976 -2813961385693338262 chip.filter -9157223735696508561 SAMstats QC -2813961385693338262->-9157223735696508561 -2822797070110800717 Filt/deduped BAM -2813961385693338262->-2822797070110800717 5086817054199510789 LibCmplx QC -2813961385693338262->5086817054199510789 -2822797070110800717->6726418958999842383 -2822797070110800717->-1839742612191801541 -630566854159570756 chip.align -5573969968501658855 SAMstats QC -630566854159570756->-5573969968501658855 -7836315747547391420 BAM -630566854159570756->-7836315747547391420 -7836315747547391420->-2813961385693338262 3278224056360108949 chip.xcor 3044149211865860682 XCOR Plot 3278224056360108949->3044149211865860682 -5329442940408814541 BW FC -833847788115793306->-5329442940408814541 -2028210297290834857 BW p-val -833847788115793306->-2028210297290834857 -9020575680027780822 FASTQ R1 (1) -9020575680027780822->-630566854159570756 -9020575680027780822->3278224056360108949 -3920315418103754538 FASTQ R2 (1) -3920315418103754538->-630566854159570756 3349416278522861524 chip.pool_ta_ctl -7488722657830764580 TAG-ALIGN 3349416278522861524->-7488722657830764580 -7488722657830764580->7067391611322475553 -7488722657830764580->309547548864115432 -7488722657830764580->344451518648220976 -7488722657830764580->4842252304056721066 -7488722657830764580->1533505211230237961 -7488722657830764580->-833847788115793306 -7488722657830764580->-1712868872712626450 -7488722657830764580->7860876123352232517 -7488722657830764580->1280814812261523417 -7488722657830764580->-1093951634233721976 5829148240877450118 chip.bam2ta_ctl -432020324048789636 TAG-ALIGN 5829148240877450118->-432020324048789636 -432020324048789636->3349416278522861524 -5629139646021107895 Filt/deduped BAM -5629139646021107895->5829148240877450118 -5629139646021107895->-1839742612191801541 6350488737599881296 chip.bam2ta_ctl -813207687890588211 TAG-ALIGN 6350488737599881296->-813207687890588211 -813207687890588211->3349416278522861524 -1652837126838065129 Filt/deduped BAM -1652837126838065129->6350488737599881296 -1652837126838065129->-1839742612191801541 8600375219314197641 chip.bam2ta_ctl 2564776506279471778 TAG-ALIGN 8600375219314197641->2564776506279471778 2564776506279471778->3349416278522861524 3743678869632621654 Filt/deduped BAM 3743678869632621654->8600375219314197641 3743678869632621654->-1839742612191801541 5647836514595071462 chip.bam2ta_ctl 6002374074577628625 TAG-ALIGN 5647836514595071462->6002374074577628625 6002374074577628625->3349416278522861524 4429941909899461507 Filt/deduped BAM 4429941909899461507->5647836514595071462 4429941909899461507->-1839742612191801541 15772734021215360 chip.bam2ta_ctl 6628930260876487697 TAG-ALIGN 15772734021215360->6628930260876487697 6628930260876487697->3349416278522861524 1902153065603360516 Filt/deduped BAM 1902153065603360516->15772734021215360 1902153065603360516->-1839742612191801541 -17909882105823704 chip.bam2ta_ctl -2731871889730899317 TAG-ALIGN -17909882105823704->-2731871889730899317 -2731871889730899317->3349416278522861524 -8439359979371568907 Filt/deduped BAM -8439359979371568907->-17909882105823704 -8439359979371568907->-1839742612191801541 -8786081549875450903 IDR Plot ppr -1712868872712626450->-8786081549875450903 8339886415325162432 IDR Peak ppr -1712868872712626450->8339886415325162432 8339886415325162432->1280814812261523417 5707442357255972162 IDR Plot rep1_vs_rep2 -7673814497566436140->5707442357255972162 -4807871002417889213 IDR NPeak rep1_vs_rep2 -7673814497566436140->-4807871002417889213 -4807871002417889213->1280814812261523417 -4552771334599280988 Overlap Peak rep1_vs_rep2 7841188483763810567->-4552771334599280988 -4552771334599280988->7860876123352232517 -3969147984678041334 Overlap Peak optimal 7860876123352232517->-3969147984678041334 1069695872237074196 Overlap reproducibility 7860876123352232517->1069695872237074196 7455677023807539688 IDR Peak optimal 1280814812261523417->7455677023807539688 5566604094352820805 IDR reproducibility 1280814812261523417->5566604094352820805 8309728310444864222 Overlap Peak ppr -1093951634233721976->8309728310444864222 8309728310444864222->7860876123352232517 -2160899277099777247 JSD Plot -1839742612191801541->-2160899277099777247

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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