File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF052DTI.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF052DTI.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF052DTI.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF052DTI.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF052DTI.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF734ILU.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF734ILU.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF734ILU.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF734ILU.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF734ILU.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF052DTI.crop_101-2bp.nodup.pr1_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF052DTI.crop_101-2bp.nodup.pr1_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF052DTI.crop_101-2bp.nodup.pr1_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF052DTI.crop_101-2bp.nodup.pr1_x_ctl.pooled.417M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF052DTI.crop_101-2bp.nodup.pr2_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF052DTI.crop_101-2bp.nodup.pr2_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF052DTI.crop_101-2bp.nodup.pr2_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF052DTI.crop_101-2bp.nodup.pr2_x_ctl.pooled.417M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF052DTI.crop_101-2bp.nodup_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF052DTI.crop_101-2bp.nodup_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF052DTI.crop_101-2bp.nodup_x_ctl.pooled.417M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF052DTI.crop_101-2bp.nodup_x_ctl.pooled.417M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF734ILU.crop_101-2bp.nodup.pr1_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF734ILU.crop_101-2bp.nodup.pr1_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF734ILU.crop_101-2bp.nodup.pr1_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF734ILU.crop_101-2bp.nodup.pr1_x_ctl.pooled.279M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF734ILU.crop_101-2bp.nodup.pr2_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF734ILU.crop_101-2bp.nodup.pr2_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF734ILU.crop_101-2bp.nodup.pr2_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF734ILU.crop_101-2bp.nodup.pr2_x_ctl.pooled.279M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF734ILU.crop_101-2bp.nodup_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF734ILU.crop_101-2bp.nodup_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF734ILU.crop_101-2bp.nodup_x_ctl.pooled.279M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF734ILU.crop_101-2bp.nodup_x_ctl.pooled.279M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF052DTI.crop_101-2bp.nodup.pr1_x_ctl.pooled.417M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF052DTI.crop_101-2bp.nodup.pr2_x_ctl.pooled.417M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF052DTI.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF052DTI.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF052DTI.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF052DTI.crop_101-2bp.nodup_x_ctl.pooled.417M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF052DTI.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF052DTI.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF052DTI.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF734ILU.crop_101-2bp.nodup.pr1_x_ctl.pooled.279M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF734ILU.crop_101-2bp.nodup.pr2_x_ctl.pooled.279M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF734ILU.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF734ILU.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF734ILU.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF734ILU.crop_101-2bp.nodup_x_ctl.pooled.279M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF734ILU.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF734ILU.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF734ILU.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF052DTI.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/03c1d10a-8685-4e44-a705-d0743ed1c211/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF052DTI.crop_101-2bp.nodup_x_ctl.pooled.417M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF052DTI.crop_101-2bp.nodup_x_ctl.pooled.417M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF734ILU.crop_101-2bp.nodup_x_ctl.pooled.279M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/df589f97-2602-4dfc-8a29-ef84a38b6a0f/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF734ILU.crop_101-2bp.nodup_x_ctl.pooled.279M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 6716737241486795582 chip.macs2_signal_track_pooled 6085072688446225378 BW FC 6716737241486795582->6085072688446225378 7539480165929704790 BW p-val 6716737241486795582->7539480165929704790 6207000695126105760 chip.call_peak_pooled 7601166263329726755 Peak (bfilt) 6207000695126105760->7601166263329726755 -5417388266499668064 Peak 6207000695126105760->-5417388266499668064 7666148588822294520 chip.idr_ppr -5417388266499668064->7666148588822294520 7586494012285052262 chip.idr -5417388266499668064->7586494012285052262 -4200543855170066208 chip.overlap -5417388266499668064->-4200543855170066208 -1272940497586054076 chip.overlap_ppr -5417388266499668064->-1272940497586054076 3884278211735401964 chip.pool_ta 8367828529257456931 TAG-ALIGN 3884278211735401964->8367828529257456931 8367828529257456931->6716737241486795582 8367828529257456931->6207000695126105760 8367828529257456931->7666148588822294520 8367828529257456931->7586494012285052262 8367828529257456931->-4200543855170066208 8367828529257456931->-1272940497586054076 6092445644246669805 chip.call_peak 5782818819503760442 Peak (bfilt) 6092445644246669805->5782818819503760442 -2862223596211486880 Peak 6092445644246669805->-2862223596211486880 -2862223596211486880->7586494012285052262 -2862223596211486880->-4200543855170066208 5420965732636058074 chip.reproducibility_overlap -2862223596211486880->5420965732636058074 1646204991211823429 chip.reproducibility_idr -2862223596211486880->1646204991211823429 1989951976770121247 chip.bam2ta 1090187688278160008 TAG-ALIGN 1989951976770121247->1090187688278160008 1090187688278160008->3884278211735401964 1090187688278160008->6092445644246669805 2813733462902992131 chip.macs2_signal_track 1090187688278160008->2813733462902992131 1090187688278160008->7666148588822294520 1090187688278160008->5420965732636058074 1090187688278160008->1646204991211823429 1090187688278160008->-1272940497586054076 6585110755820994329 chip.filter -2191580597004561055 SAMstats QC 6585110755820994329->-2191580597004561055 -8544645484552059641 Filt/deduped BAM 6585110755820994329->-8544645484552059641 -3451396649103049302 LibCmplx QC 6585110755820994329->-3451396649103049302 -8544645484552059641->1989951976770121247 7374856997297240218 chip.jsd -8544645484552059641->7374856997297240218 -6444350244576246405 chip.align -5741565652487941138 SAMstats QC -6444350244576246405->-5741565652487941138 3652294126210327108 BAM -6444350244576246405->3652294126210327108 3652294126210327108->6585110755820994329 888274324133375402 chip.xcor -4399216543925146499 XCOR Plot 888274324133375402->-4399216543925146499 -353825634818582118 BW FC 2813733462902992131->-353825634818582118 7860150423856311966 BW p-val 2813733462902992131->7860150423856311966 -6985183200959082210 FASTQ R1 (1) -6985183200959082210->-6444350244576246405 -6985183200959082210->888274324133375402 7855780168277382141 FASTQ R2 (1) 7855780168277382141->-6444350244576246405 -3673312678432608816 chip.call_peak 5050670502510055472 Peak (bfilt) -3673312678432608816->5050670502510055472 2682020905322464138 Peak -3673312678432608816->2682020905322464138 2682020905322464138->7586494012285052262 2682020905322464138->-4200543855170066208 2682020905322464138->5420965732636058074 2682020905322464138->1646204991211823429 -7084838076375765220 chip.bam2ta 649835692890597178 TAG-ALIGN -7084838076375765220->649835692890597178 649835692890597178->3884278211735401964 649835692890597178->-3673312678432608816 -118987373514349197 chip.macs2_signal_track 649835692890597178->-118987373514349197 649835692890597178->7666148588822294520 649835692890597178->5420965732636058074 649835692890597178->1646204991211823429 649835692890597178->-1272940497586054076 3011056435700596796 chip.filter 1452440207886907603 SAMstats QC 3011056435700596796->1452440207886907603 -2012768370128424619 Filt/deduped BAM 3011056435700596796->-2012768370128424619 5011308656485124683 LibCmplx QC 3011056435700596796->5011308656485124683 -2012768370128424619->-7084838076375765220 -2012768370128424619->7374856997297240218 -8380577468613678003 chip.align 2865442427519813894 SAMstats QC -8380577468613678003->2865442427519813894 5732609395869624867 BAM -8380577468613678003->5732609395869624867 5732609395869624867->3011056435700596796 2927100260459468470 chip.xcor 846165702368660028 XCOR Plot 2927100260459468470->846165702368660028 -2238522317453904907 BW FC -118987373514349197->-2238522317453904907 -276613695906219140 BW p-val -118987373514349197->-276613695906219140 -3732589604157388777 FASTQ R1 (1) -3732589604157388777->-8380577468613678003 -3732589604157388777->2927100260459468470 3406996215911200607 FASTQ R2 (1) 3406996215911200607->-8380577468613678003 4295695207573483797 chip.pool_ta_ctl -3704504785206526920 TAG-ALIGN 4295695207573483797->-3704504785206526920 -3704504785206526920->6716737241486795582 -3704504785206526920->6207000695126105760 -3704504785206526920->6092445644246669805 -3704504785206526920->2813733462902992131 -3704504785206526920->-3673312678432608816 -3704504785206526920->-118987373514349197 -3704504785206526920->7666148588822294520 -3704504785206526920->5420965732636058074 -3704504785206526920->1646204991211823429 -3704504785206526920->-1272940497586054076 -2420969910143633066 chip.bam2ta_ctl -7341948119083326642 TAG-ALIGN -2420969910143633066->-7341948119083326642 -7341948119083326642->4295695207573483797 -8156222316266264258 Filt/deduped BAM -8156222316266264258->-2420969910143633066 -8156222316266264258->7374856997297240218 -5098924575938994557 chip.bam2ta_ctl 8226102593243235608 TAG-ALIGN -5098924575938994557->8226102593243235608 8226102593243235608->4295695207573483797 6482142908568451378 Filt/deduped BAM 6482142908568451378->-5098924575938994557 6482142908568451378->7374856997297240218 2033920094299964247 chip.bam2ta_ctl 1610853095113905590 TAG-ALIGN 2033920094299964247->1610853095113905590 1610853095113905590->4295695207573483797 -8369855503554151555 Filt/deduped BAM -8369855503554151555->2033920094299964247 -8369855503554151555->7374856997297240218 -3663597732854480913 chip.bam2ta_ctl 4265332397575771082 TAG-ALIGN -3663597732854480913->4265332397575771082 4265332397575771082->4295695207573483797 -8014425144808163434 Filt/deduped BAM -8014425144808163434->-3663597732854480913 -8014425144808163434->7374856997297240218 8628295033399507887 chip.bam2ta_ctl -1462861640055025683 TAG-ALIGN 8628295033399507887->-1462861640055025683 -1462861640055025683->4295695207573483797 -5282372400274101798 Filt/deduped BAM -5282372400274101798->8628295033399507887 -5282372400274101798->7374856997297240218 -5467323044255308454 chip.bam2ta_ctl -678171887079114835 TAG-ALIGN -5467323044255308454->-678171887079114835 -678171887079114835->4295695207573483797 -4308586190083307092 Filt/deduped BAM -4308586190083307092->-5467323044255308454 -4308586190083307092->7374856997297240218 -3600745350463689582 IDR Plot ppr 7666148588822294520->-3600745350463689582 -8617557399861754610 IDR Peak ppr 7666148588822294520->-8617557399861754610 -8617557399861754610->1646204991211823429 -2502838919688157571 IDR Plot rep1_vs_rep2 7586494012285052262->-2502838919688157571 6092749485431722686 IDR NPeak rep1_vs_rep2 7586494012285052262->6092749485431722686 6092749485431722686->1646204991211823429 2484766125237255427 Overlap Peak rep1_vs_rep2 -4200543855170066208->2484766125237255427 2484766125237255427->5420965732636058074 -6318011535602669901 Overlap Peak optimal 5420965732636058074->-6318011535602669901 -8543704468257519585 Overlap reproducibility 5420965732636058074->-8543704468257519585 6001456323027933154 IDR Peak optimal 1646204991211823429->6001456323027933154 3531939321318390363 IDR reproducibility 1646204991211823429->3531939321318390363 4360113186292776088 Overlap Peak ppr -1272940497586054076->4360113186292776088 4360113186292776088->5420965732636058074 -3725594008126272603 JSD Plot 7374856997297240218->-3725594008126272603

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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