File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF378PPW.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF378PPW.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF378PPW.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF378PPW.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF378PPW.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF150LAR.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF150LAR.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF150LAR.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF150LAR.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF150LAR.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF378PPW.crop_101-2bp.nodup.pr1_x_ctl.pooled.426M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF378PPW.crop_101-2bp.nodup.pr1_x_ctl.pooled.426M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF378PPW.crop_101-2bp.nodup.pr1_x_ctl.pooled.426M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF378PPW.crop_101-2bp.nodup.pr1_x_ctl.pooled.426M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF378PPW.crop_101-2bp.nodup.pr2_x_ctl.pooled.426M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF378PPW.crop_101-2bp.nodup.pr2_x_ctl.pooled.426M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF378PPW.crop_101-2bp.nodup.pr2_x_ctl.pooled.426M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF378PPW.crop_101-2bp.nodup.pr2_x_ctl.pooled.426M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF378PPW.crop_101-2bp.nodup_x_ctl.pooled.426M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF378PPW.crop_101-2bp.nodup_x_ctl.pooled.426M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF378PPW.crop_101-2bp.nodup_x_ctl.pooled.426M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF378PPW.crop_101-2bp.nodup_x_ctl.pooled.426M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF150LAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.332M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF150LAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.332M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF150LAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.332M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF150LAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.332M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF150LAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.332M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF150LAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.332M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF150LAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.332M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF150LAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.332M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF150LAR.crop_101-2bp.nodup_x_ctl.pooled.332M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF150LAR.crop_101-2bp.nodup_x_ctl.pooled.332M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF150LAR.crop_101-2bp.nodup_x_ctl.pooled.332M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF150LAR.crop_101-2bp.nodup_x_ctl.pooled.332M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF378PPW.crop_101-2bp.nodup.pr1_x_ctl.pooled.426M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF378PPW.crop_101-2bp.nodup.pr2_x_ctl.pooled.426M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF378PPW.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF378PPW.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF378PPW.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF378PPW.crop_101-2bp.nodup_x_ctl.pooled.426M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF378PPW.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF378PPW.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF378PPW.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF150LAR.crop_101-2bp.nodup.pr1_x_ctl.pooled.332M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF150LAR.crop_101-2bp.nodup.pr2_x_ctl.pooled.332M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF150LAR.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF150LAR.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF150LAR.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF150LAR.crop_101-2bp.nodup_x_ctl.pooled.332M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF150LAR.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF150LAR.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF150LAR.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF378PPW.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF378PPW.crop_101-2bp.nodup_x_ctl.pooled.426M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF378PPW.crop_101-2bp.nodup_x_ctl.pooled.426M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF150LAR.crop_101-2bp.nodup_x_ctl.pooled.332M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/ae8f874b-0cb7-43a5-bce7-1b949cb2f527/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF150LAR.crop_101-2bp.nodup_x_ctl.pooled.332M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 539854913619088639 chip.macs2_signal_track_pooled 4011999132646611145 BW FC 539854913619088639->4011999132646611145 -6961913739626226715 BW p-val 539854913619088639->-6961913739626226715 -4226715717061435999 chip.call_peak_pooled -9083407959472910919 Peak (bfilt) -4226715717061435999->-9083407959472910919 -9141716032928623640 Peak -4226715717061435999->-9141716032928623640 -4222599368535906657 chip.idr_ppr -9141716032928623640->-4222599368535906657 -371498438066746594 chip.idr -9141716032928623640->-371498438066746594 6931598301083093944 chip.overlap -9141716032928623640->6931598301083093944 -7815421151420252139 chip.overlap_ppr -9141716032928623640->-7815421151420252139 5161239786943554914 chip.pool_ta 996141031124362153 TAG-ALIGN 5161239786943554914->996141031124362153 996141031124362153->539854913619088639 996141031124362153->-4226715717061435999 996141031124362153->-4222599368535906657 996141031124362153->-371498438066746594 996141031124362153->6931598301083093944 996141031124362153->-7815421151420252139 -1319370563671892284 chip.call_peak -4108118612484297189 Peak (bfilt) -1319370563671892284->-4108118612484297189 -7690148027473984253 Peak -1319370563671892284->-7690148027473984253 -7690148027473984253->-371498438066746594 -7690148027473984253->6931598301083093944 1038397696741379526 chip.reproducibility_overlap -7690148027473984253->1038397696741379526 6603526866023608690 chip.reproducibility_idr -7690148027473984253->6603526866023608690 -3466771055672656037 chip.bam2ta 1277821883620122473 TAG-ALIGN -3466771055672656037->1277821883620122473 1277821883620122473->5161239786943554914 1277821883620122473->-1319370563671892284 710717360193739371 chip.macs2_signal_track 1277821883620122473->710717360193739371 1277821883620122473->-4222599368535906657 1277821883620122473->1038397696741379526 1277821883620122473->6603526866023608690 1277821883620122473->-7815421151420252139 -2652960614248814344 chip.filter -7120957527719540948 SAMstats QC -2652960614248814344->-7120957527719540948 -5325375856191968767 Filt/deduped BAM -2652960614248814344->-5325375856191968767 -7049369566903623695 LibCmplx QC -2652960614248814344->-7049369566903623695 -5325375856191968767->-3466771055672656037 3469678417765669604 chip.jsd -5325375856191968767->3469678417765669604 -4937619449072193751 chip.align -964832543622775479 SAMstats QC -4937619449072193751->-964832543622775479 4385396737271598529 BAM -4937619449072193751->4385396737271598529 4385396737271598529->-2652960614248814344 -4427883065683443010 chip.xcor 7727955506502776499 XCOR Plot -4427883065683443010->7727955506502776499 7931410432867845133 BW FC 710717360193739371->7931410432867845133 -6527194761103119633 BW p-val 710717360193739371->-6527194761103119633 -6870082937962678714 FASTQ R1 (1) -6870082937962678714->-4937619449072193751 -6870082937962678714->-4427883065683443010 -329553684342863814 FASTQ R2 (1) -329553684342863814->-4937619449072193751 2961964684955508966 chip.call_peak -7034611377289807289 Peak (bfilt) 2961964684955508966->-7034611377289807289 7949490646554877139 Peak 2961964684955508966->7949490646554877139 7949490646554877139->-371498438066746594 7949490646554877139->6931598301083093944 7949490646554877139->1038397696741379526 7949490646554877139->6603526866023608690 8386222382027638714 chip.bam2ta -5032082351282444260 TAG-ALIGN 8386222382027638714->-5032082351282444260 -5032082351282444260->5161239786943554914 -5032082351282444260->2961964684955508966 8247494417680873528 chip.macs2_signal_track -5032082351282444260->8247494417680873528 -5032082351282444260->-4222599368535906657 -5032082351282444260->1038397696741379526 -5032082351282444260->6603526866023608690 -5032082351282444260->-7815421151420252139 813944984677608149 chip.filter -1807868139380330993 SAMstats QC 813944984677608149->-1807868139380330993 4177069046878053268 Filt/deduped BAM 813944984677608149->4177069046878053268 6889752009461531122 LibCmplx QC 813944984677608149->6889752009461531122 4177069046878053268->8386222382027638714 4177069046878053268->3469678417765669604 -2304063910543227035 chip.align -3648429878703297015 SAMstats QC -2304063910543227035->-3648429878703297015 7742568377549758812 BAM -2304063910543227035->7742568377549758812 7742568377549758812->813944984677608149 -1644974872640257094 chip.xcor 8460900346145922677 XCOR Plot -1644974872640257094->8460900346145922677 -3790641513198476386 BW FC 8247494417680873528->-3790641513198476386 6216583842549142407 BW p-val 8247494417680873528->6216583842549142407 -42646205814740902 FASTQ R1 (1) -42646205814740902->-2304063910543227035 -42646205814740902->-1644974872640257094 -5899643926716560671 FASTQ R2 (1) -5899643926716560671->-2304063910543227035 5416108079349911274 chip.pool_ta_ctl -6265303606432573939 TAG-ALIGN 5416108079349911274->-6265303606432573939 -6265303606432573939->539854913619088639 -6265303606432573939->-4226715717061435999 -6265303606432573939->-1319370563671892284 -6265303606432573939->710717360193739371 -6265303606432573939->2961964684955508966 -6265303606432573939->8247494417680873528 -6265303606432573939->-4222599368535906657 -6265303606432573939->1038397696741379526 -6265303606432573939->6603526866023608690 -6265303606432573939->-7815421151420252139 5776430291964750230 chip.bam2ta_ctl 3338679565885365330 TAG-ALIGN 5776430291964750230->3338679565885365330 3338679565885365330->5416108079349911274 -8940184400238763449 Filt/deduped BAM -8940184400238763449->5776430291964750230 -8940184400238763449->3469678417765669604 -3652793988311856195 chip.bam2ta_ctl -369502202923050657 TAG-ALIGN -3652793988311856195->-369502202923050657 -369502202923050657->5416108079349911274 2177793202439326896 Filt/deduped BAM 2177793202439326896->-3652793988311856195 2177793202439326896->3469678417765669604 2657055762366038820 chip.bam2ta_ctl 5005955939713088049 TAG-ALIGN 2657055762366038820->5005955939713088049 5005955939713088049->5416108079349911274 -9818805769625066 Filt/deduped BAM -9818805769625066->2657055762366038820 -9818805769625066->3469678417765669604 4722720967961446884 chip.bam2ta_ctl -212454309535350163 TAG-ALIGN 4722720967961446884->-212454309535350163 -212454309535350163->5416108079349911274 4194998451514110661 Filt/deduped BAM 4194998451514110661->4722720967961446884 4194998451514110661->3469678417765669604 -2564143180439474987 chip.bam2ta_ctl -3785896051187077161 TAG-ALIGN -2564143180439474987->-3785896051187077161 -3785896051187077161->5416108079349911274 -1235631122571502057 Filt/deduped BAM -1235631122571502057->-2564143180439474987 -1235631122571502057->3469678417765669604 5745726924020322708 chip.bam2ta_ctl 4504662879090900211 TAG-ALIGN 5745726924020322708->4504662879090900211 4504662879090900211->5416108079349911274 8118975558875907493 Filt/deduped BAM 8118975558875907493->5745726924020322708 8118975558875907493->3469678417765669604 101548514169131108 IDR Plot ppr -4222599368535906657->101548514169131108 -5551859981008738587 IDR Peak ppr -4222599368535906657->-5551859981008738587 -5551859981008738587->6603526866023608690 -6294807569673814244 IDR Plot rep1_vs_rep2 -371498438066746594->-6294807569673814244 8915507906129935002 IDR NPeak rep1_vs_rep2 -371498438066746594->8915507906129935002 8915507906129935002->6603526866023608690 -1794608212765895174 Overlap Peak rep1_vs_rep2 6931598301083093944->-1794608212765895174 -1794608212765895174->1038397696741379526 -6517960389429184084 Overlap Peak optimal 1038397696741379526->-6517960389429184084 8272829380808558128 Overlap reproducibility 1038397696741379526->8272829380808558128 5704848548892802736 IDR Peak optimal 6603526866023608690->5704848548892802736 1045979277065811196 IDR reproducibility 6603526866023608690->1045979277065811196 4458392129425701873 Overlap Peak ppr -7815421151420252139->4458392129425701873 4458392129425701873->1038397696741379526 5974150356855815846 JSD Plot 3469678417765669604->5974150356855815846

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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