File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/a10a7070-199d-46a9-86eb-c50f7d7322b1/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/c4a44d6b-9471-4ee2-9b0e-6cdd4e5fc01e/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/fb4149fa-70d6-49ad-99b5-adc87068337a/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/55544272-a848-479d-8122-5ca442081e22/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF081KQF.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF081KQF.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF081KQF.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF081KQF.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF081KQF.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF201QVE.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF201QVE.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF201QVE.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF201QVE.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF201QVE.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF081KQF.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF081KQF.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF081KQF.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF081KQF.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF081KQF.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF081KQF.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF081KQF.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF081KQF.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF081KQF.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF081KQF.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF081KQF.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF081KQF.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF201QVE.crop_101-2bp.nodup.pr1_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF201QVE.crop_101-2bp.nodup.pr1_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF201QVE.crop_101-2bp.nodup.pr1_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF201QVE.crop_101-2bp.nodup.pr1_x_ctl.pooled.346M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF201QVE.crop_101-2bp.nodup.pr2_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF201QVE.crop_101-2bp.nodup.pr2_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF201QVE.crop_101-2bp.nodup.pr2_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF201QVE.crop_101-2bp.nodup.pr2_x_ctl.pooled.346M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF201QVE.crop_101-2bp.nodup_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF201QVE.crop_101-2bp.nodup_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF201QVE.crop_101-2bp.nodup_x_ctl.pooled.346M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF201QVE.crop_101-2bp.nodup_x_ctl.pooled.346M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF081KQF.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF081KQF.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF081KQF.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF081KQF.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF081KQF.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF081KQF.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF081KQF.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF081KQF.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF081KQF.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF201QVE.crop_101-2bp.nodup.pr1_x_ctl.pooled.346M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF201QVE.crop_101-2bp.nodup.pr2_x_ctl.pooled.346M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF201QVE.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF201QVE.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF201QVE.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF201QVE.crop_101-2bp.nodup_x_ctl.pooled.346M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF201QVE.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF201QVE.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF201QVE.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_dir2/chip/2bbc1e7f-3933-4c02-8ec9-ede594314af5/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF081KQF.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF081KQF.crop_101-2bp.nodup_x_ctl.pooled.336M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF081KQF.crop_101-2bp.nodup_x_ctl.pooled.336M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF201QVE.crop_101-2bp.nodup_x_ctl.pooled.346M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_dir2/chip/2d640647-f006-434d-a925-ab728cc4d711/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF201QVE.crop_101-2bp.nodup_x_ctl.pooled.346M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -8393405206730419660 chip.macs2_signal_track_pooled 4975132258232153887 BW FC -8393405206730419660->4975132258232153887 -1711276364494229018 BW p-val -8393405206730419660->-1711276364494229018 6375905428822191101 chip.call_peak_pooled -8576767460427598718 Peak (bfilt) 6375905428822191101->-8576767460427598718 4962022961191996886 Peak 6375905428822191101->4962022961191996886 -1123405799336887200 chip.idr_ppr 4962022961191996886->-1123405799336887200 -1826235713023362147 chip.idr 4962022961191996886->-1826235713023362147 -7233717682939944844 chip.overlap 4962022961191996886->-7233717682939944844 -1256792062082183470 chip.overlap_ppr 4962022961191996886->-1256792062082183470 -5103238198491001986 chip.pool_ta -6539897332746014196 TAG-ALIGN -5103238198491001986->-6539897332746014196 -6539897332746014196->-8393405206730419660 -6539897332746014196->6375905428822191101 -6539897332746014196->-1123405799336887200 -6539897332746014196->-1826235713023362147 -6539897332746014196->-7233717682939944844 -6539897332746014196->-1256792062082183470 5507925880765463136 chip.call_peak -7825914776345809252 Peak (bfilt) 5507925880765463136->-7825914776345809252 242661487290922318 Peak 5507925880765463136->242661487290922318 242661487290922318->-1826235713023362147 242661487290922318->-7233717682939944844 8188021739823957215 chip.reproducibility_overlap 242661487290922318->8188021739823957215 367603129703649569 chip.reproducibility_idr 242661487290922318->367603129703649569 8468499678144728638 chip.bam2ta -7809248059606291263 TAG-ALIGN 8468499678144728638->-7809248059606291263 -7809248059606291263->-5103238198491001986 -7809248059606291263->5507925880765463136 -7305685976667193077 chip.macs2_signal_track -7809248059606291263->-7305685976667193077 -7809248059606291263->-1123405799336887200 -7809248059606291263->8188021739823957215 -7809248059606291263->367603129703649569 -7809248059606291263->-1256792062082183470 6812330024485653297 chip.filter -1502598845354240912 SAMstats QC 6812330024485653297->-1502598845354240912 8758770490779727517 Filt/deduped BAM 6812330024485653297->8758770490779727517 7958077770908908691 LibCmplx QC 6812330024485653297->7958077770908908691 8758770490779727517->8468499678144728638 6777021954264256977 chip.jsd 8758770490779727517->6777021954264256977 2986653214598892020 chip.align -6519968788761189166 SAMstats QC 2986653214598892020->-6519968788761189166 6494195770474456549 BAM 2986653214598892020->6494195770474456549 6494195770474456549->6812330024485653297 1339416030750825860 chip.xcor 239222943775343397 XCOR Plot 1339416030750825860->239222943775343397 -8969256984899067603 BW FC -7305685976667193077->-8969256984899067603 -4620510416508985524 BW p-val -7305685976667193077->-4620510416508985524 720513741842708579 FASTQ R1 (1) 720513741842708579->2986653214598892020 720513741842708579->1339416030750825860 -7994250432865018383 FASTQ R2 (1) -7994250432865018383->2986653214598892020 -7826335473908232089 chip.call_peak -4592068709741261198 Peak (bfilt) -7826335473908232089->-4592068709741261198 -9194913052876627942 Peak -7826335473908232089->-9194913052876627942 -9194913052876627942->-1826235713023362147 -9194913052876627942->-7233717682939944844 -9194913052876627942->8188021739823957215 -9194913052876627942->367603129703649569 51676576084916397 chip.bam2ta -8648526227532318123 TAG-ALIGN 51676576084916397->-8648526227532318123 -8648526227532318123->-5103238198491001986 -8648526227532318123->-7826335473908232089 7904034598030425243 chip.macs2_signal_track -8648526227532318123->7904034598030425243 -8648526227532318123->-1123405799336887200 -8648526227532318123->8188021739823957215 -8648526227532318123->367603129703649569 -8648526227532318123->-1256792062082183470 9110524218455368226 chip.filter 3400674927122073256 SAMstats QC 9110524218455368226->3400674927122073256 -967233711762148399 Filt/deduped BAM 9110524218455368226->-967233711762148399 3800231872632931831 LibCmplx QC 9110524218455368226->3800231872632931831 -967233711762148399->51676576084916397 -967233711762148399->6777021954264256977 7559115064142869100 chip.align 5281947987823319186 SAMstats QC 7559115064142869100->5281947987823319186 2394718552235938596 BAM 7559115064142869100->2394718552235938596 2394718552235938596->9110524218455368226 3139566853658407929 chip.xcor 7638214646149544452 XCOR Plot 3139566853658407929->7638214646149544452 -6857422971008972031 BW FC 7904034598030425243->-6857422971008972031 -2401750817724635786 BW p-val 7904034598030425243->-2401750817724635786 -7420217971367274719 FASTQ R1 (1) -7420217971367274719->7559115064142869100 -7420217971367274719->3139566853658407929 8546735811277356108 FASTQ R2 (1) 8546735811277356108->7559115064142869100 -8118283473835318589 chip.pool_ta_ctl 2072809165187696428 TAG-ALIGN -8118283473835318589->2072809165187696428 2072809165187696428->-8393405206730419660 2072809165187696428->6375905428822191101 2072809165187696428->5507925880765463136 2072809165187696428->-7305685976667193077 2072809165187696428->-7826335473908232089 2072809165187696428->7904034598030425243 2072809165187696428->-1123405799336887200 2072809165187696428->8188021739823957215 2072809165187696428->367603129703649569 2072809165187696428->-1256792062082183470 -5119824391202774935 chip.bam2ta_ctl -8399506309721526825 TAG-ALIGN -5119824391202774935->-8399506309721526825 -8399506309721526825->-8118283473835318589 9130984832607304346 Filt/deduped BAM 9130984832607304346->-5119824391202774935 9130984832607304346->6777021954264256977 -4854171105007320806 chip.bam2ta_ctl 8303511820530744956 TAG-ALIGN -4854171105007320806->8303511820530744956 8303511820530744956->-8118283473835318589 7013002505563828079 Filt/deduped BAM 7013002505563828079->-4854171105007320806 7013002505563828079->6777021954264256977 9125037717912855545 chip.bam2ta_ctl 7432563852885604279 TAG-ALIGN 9125037717912855545->7432563852885604279 7432563852885604279->-8118283473835318589 -631663523067438500 Filt/deduped BAM -631663523067438500->9125037717912855545 -631663523067438500->6777021954264256977 -382200819622500056 chip.bam2ta_ctl -988972466259846438 TAG-ALIGN -382200819622500056->-988972466259846438 -988972466259846438->-8118283473835318589 7619168929101300733 Filt/deduped BAM 7619168929101300733->-382200819622500056 7619168929101300733->6777021954264256977 -477338359710025836 chip.bam2ta_ctl -7665205524617355659 TAG-ALIGN -477338359710025836->-7665205524617355659 -7665205524617355659->-8118283473835318589 7357861222588869545 Filt/deduped BAM 7357861222588869545->-477338359710025836 7357861222588869545->6777021954264256977 7668304868440408577 chip.bam2ta_ctl -6677365703675693934 TAG-ALIGN 7668304868440408577->-6677365703675693934 -6677365703675693934->-8118283473835318589 -6398357117611465878 Filt/deduped BAM -6398357117611465878->7668304868440408577 -6398357117611465878->6777021954264256977 -7364947823081713052 IDR Plot ppr -1123405799336887200->-7364947823081713052 -1189631034537620292 IDR Peak ppr -1123405799336887200->-1189631034537620292 -1189631034537620292->367603129703649569 -337638788670154239 IDR Plot rep1_vs_rep2 -1826235713023362147->-337638788670154239 -2898274652782557020 IDR NPeak rep1_vs_rep2 -1826235713023362147->-2898274652782557020 -2898274652782557020->367603129703649569 1490155474514609082 Overlap Peak rep1_vs_rep2 -7233717682939944844->1490155474514609082 1490155474514609082->8188021739823957215 3292497257763107344 Overlap Peak optimal 8188021739823957215->3292497257763107344 177517849264974855 Overlap reproducibility 8188021739823957215->177517849264974855 4670093347011006972 IDR Peak optimal 367603129703649569->4670093347011006972 5544271320091466754 IDR reproducibility 367603129703649569->5544271320091466754 126243367950847057 Overlap Peak ppr -1256792062082183470->126243367950847057 126243367950847057->8188021739823957215 7893358230308453650 JSD Plot 6777021954264256977->7893358230308453650

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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