File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF271YPD.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF271YPD.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF271YPD.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF271YPD.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF271YPD.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF031VYK.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF031VYK.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF031VYK.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF031VYK.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031VYK.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.regionPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.regionPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.regionPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.regionPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.regionPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.regionPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.regionPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_ppr/glob-dab68893df43168f2b301266b4498136/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_ppr/glob-6d5ecccaf6ecff88ff547bad03a90af6/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_ppr/glob-c71d4cca8627aab27dc3503b7db7a39d/pooled-pr1_vs_pooled-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr1/glob-dab68893df43168f2b301266b4498136/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr1/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr1.pooled_x_ctl.pooled.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr2/glob-dab68893df43168f2b301266b4498136/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr2/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr2/glob-c71d4cca8627aab27dc3503b7db7a39d/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr2/glob-3c17d82667de5da0b56a7c17d88175d2/rep-pr2.pooled_x_ctl.pooled.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pooled/glob-dab68893df43168f2b301266b4498136/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pooled/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pooled/glob-c71d4cca8627aab27dc3503b7db7a39d/rep.pooled_x_ctl.pooled.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pooled/glob-3c17d82667de5da0b56a7c17d88175d2/rep.pooled_x_ctl.pooled.300K.regionPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap/shard-1/glob-dab68893df43168f2b301266b4498136/rep1_vs_rep2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1_vs_rep2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1_vs_rep2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_pr/shard-0/glob-dab68893df43168f2b301266b4498136/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_pr/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_pr/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/rep1-pr1_vs_rep1-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-0/glob-dab68893df43168f2b301266b4498136/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-0/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-0/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-0/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.300K.regionPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_pr/shard-1/glob-dab68893df43168f2b301266b4498136/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_pr/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_pr/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/rep2-pr1_vs_rep2-pr2.overlap.bfilt.regionPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.300K.regionPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.300K.regionPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-1/glob-dab68893df43168f2b301266b4498136/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.300K.bfilt.regionPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-1/glob-6d5ecccaf6ecff88ff547bad03a90af6/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.300K.bfilt.regionPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-1/glob-c71d4cca8627aab27dc3503b7db7a39d/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.300K.bfilt.regionPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-1/glob-3c17d82667de5da0b56a7c17d88175d2/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.300K.regionPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.300K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF271YPD.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF271YPD.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF271YPD.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF271YPD.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF271YPD.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF271YPD.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.300K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.300K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF031VYK.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF031VYK.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF031VYK.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.300K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF031VYK.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF031VYK.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF031VYK.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF271YPD.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 7039035442366926836 chip.macs2_signal_track_pooled -6999518500761598085 BW FC 7039035442366926836->-6999518500761598085 2597057507401550896 BW p-val 7039035442366926836->2597057507401550896 -7404737673447620725 chip.call_peak_pooled -7313778119389688631 Peak (bfilt) -7404737673447620725->-7313778119389688631 3416084900746431355 Peak -7404737673447620725->3416084900746431355 7194228908319476622 chip.idr_ppr 3416084900746431355->7194228908319476622 5980475539602106293 chip.idr 3416084900746431355->5980475539602106293 -3669264197363424591 chip.overlap 3416084900746431355->-3669264197363424591 3694477400097518774 chip.overlap_ppr 3416084900746431355->3694477400097518774 4239297022226638333 chip.pool_ta 1911057205954239167 TAG-ALIGN 4239297022226638333->1911057205954239167 1911057205954239167->7039035442366926836 1911057205954239167->-7404737673447620725 1911057205954239167->7194228908319476622 1911057205954239167->5980475539602106293 1911057205954239167->-3669264197363424591 1911057205954239167->3694477400097518774 -3247016219724126994 chip.call_peak -8515665316304806782 Peak (bfilt) -3247016219724126994->-8515665316304806782 1957589499318372669 Peak -3247016219724126994->1957589499318372669 1957589499318372669->5980475539602106293 1957589499318372669->-3669264197363424591 8416730863323394945 chip.reproducibility_overlap 1957589499318372669->8416730863323394945 5971914703747761542 chip.reproducibility_idr 1957589499318372669->5971914703747761542 247143274415815252 chip.bam2ta 9080070140406497194 TAG-ALIGN 247143274415815252->9080070140406497194 9080070140406497194->4239297022226638333 9080070140406497194->-3247016219724126994 1806707204828376061 chip.macs2_signal_track 9080070140406497194->1806707204828376061 9080070140406497194->7194228908319476622 9080070140406497194->8416730863323394945 9080070140406497194->5971914703747761542 9080070140406497194->3694477400097518774 2469017734013499755 chip.filter -802566350054052251 SAMstats QC 2469017734013499755->-802566350054052251 3443867561493732996 Filt/deduped BAM 2469017734013499755->3443867561493732996 -5571772099983267907 LibCmplx QC 2469017734013499755->-5571772099983267907 3443867561493732996->247143274415815252 1509214505103176907 chip.jsd 3443867561493732996->1509214505103176907 -6305048077353556568 chip.align 8709075032166543958 SAMstats QC -6305048077353556568->8709075032166543958 -3518264338881402104 BAM -6305048077353556568->-3518264338881402104 -3518264338881402104->2469017734013499755 -6656696261708470763 chip.xcor -4031527420801541967 XCOR Plot -6656696261708470763->-4031527420801541967 -8527989005436311643 BW FC 1806707204828376061->-8527989005436311643 4476714692807508450 BW p-val 1806707204828376061->4476714692807508450 8704767515826983217 FASTQ R1 (1) 8704767515826983217->-6305048077353556568 8704767515826983217->-6656696261708470763 4784121321937483857 FASTQ R2 (1) 4784121321937483857->-6305048077353556568 -5968169513012088261 chip.call_peak -679238082447730223 Peak (bfilt) -5968169513012088261->-679238082447730223 -8502673029247109720 Peak -5968169513012088261->-8502673029247109720 -8502673029247109720->5980475539602106293 -8502673029247109720->-3669264197363424591 -8502673029247109720->8416730863323394945 -8502673029247109720->5971914703747761542 -3953506710947328011 chip.bam2ta -1821178600784545722 TAG-ALIGN -3953506710947328011->-1821178600784545722 -1821178600784545722->4239297022226638333 -1821178600784545722->-5968169513012088261 3958297157239408246 chip.macs2_signal_track -1821178600784545722->3958297157239408246 -1821178600784545722->7194228908319476622 -1821178600784545722->8416730863323394945 -1821178600784545722->5971914703747761542 -1821178600784545722->3694477400097518774 -8174217538575365554 chip.filter 6995852935053050236 SAMstats QC -8174217538575365554->6995852935053050236 -4808016465120828526 Filt/deduped BAM -8174217538575365554->-4808016465120828526 -70313387434902810 LibCmplx QC -8174217538575365554->-70313387434902810 -4808016465120828526->-3953506710947328011 -4808016465120828526->1509214505103176907 -3688480963331342842 chip.align 3685674549901398323 SAMstats QC -3688480963331342842->3685674549901398323 2379978244178465237 BAM -3688480963331342842->2379978244178465237 2379978244178465237->-8174217538575365554 429105821055961663 chip.xcor -7219466981612944102 XCOR Plot 429105821055961663->-7219466981612944102 -810815647959666715 BW FC 3958297157239408246->-810815647959666715 -2846632288437450566 BW p-val 3958297157239408246->-2846632288437450566 -4237860496611532603 FASTQ R1 (1) -4237860496611532603->-3688480963331342842 -4237860496611532603->429105821055961663 -1908465490561073601 FASTQ R2 (1) -1908465490561073601->-3688480963331342842 8606956850190923420 chip.pool_ta_ctl -8470039639923762083 TAG-ALIGN 8606956850190923420->-8470039639923762083 -8470039639923762083->7039035442366926836 -8470039639923762083->-7404737673447620725 -8470039639923762083->-3247016219724126994 -8470039639923762083->1806707204828376061 -8470039639923762083->-5968169513012088261 -8470039639923762083->3958297157239408246 -8470039639923762083->7194228908319476622 -8470039639923762083->8416730863323394945 -8470039639923762083->5971914703747761542 -8470039639923762083->3694477400097518774 -4803213616638277250 chip.bam2ta_ctl -6052943874964875920 TAG-ALIGN -4803213616638277250->-6052943874964875920 -6052943874964875920->8606956850190923420 6256598101835148692 Filt/deduped BAM 6256598101835148692->-4803213616638277250 6256598101835148692->1509214505103176907 3308816871007172934 chip.bam2ta_ctl -3277511271915162330 TAG-ALIGN 3308816871007172934->-3277511271915162330 -3277511271915162330->8606956850190923420 -961141782890535931 Filt/deduped BAM -961141782890535931->3308816871007172934 -961141782890535931->1509214505103176907 -5534595349795425828 chip.bam2ta_ctl -5853956600858958156 TAG-ALIGN -5534595349795425828->-5853956600858958156 -5853956600858958156->8606956850190923420 -218257526768712848 Filt/deduped BAM -218257526768712848->-5534595349795425828 -218257526768712848->1509214505103176907 8935268450230392461 chip.bam2ta_ctl -5123132017101894852 TAG-ALIGN 8935268450230392461->-5123132017101894852 -5123132017101894852->8606956850190923420 7569728046371481350 Filt/deduped BAM 7569728046371481350->8935268450230392461 7569728046371481350->1509214505103176907 6550269895238849385 chip.bam2ta_ctl 9151376541572588917 TAG-ALIGN 6550269895238849385->9151376541572588917 9151376541572588917->8606956850190923420 4964311917747111520 Filt/deduped BAM 4964311917747111520->6550269895238849385 4964311917747111520->1509214505103176907 -4257287750498790410 chip.bam2ta_ctl -7429495165651031596 TAG-ALIGN -4257287750498790410->-7429495165651031596 -7429495165651031596->8606956850190923420 7452735471190751283 Filt/deduped BAM 7452735471190751283->-4257287750498790410 7452735471190751283->1509214505103176907 -245392569352064713 IDR Plot ppr 7194228908319476622->-245392569352064713 5474968896377909725 IDR Peak ppr 7194228908319476622->5474968896377909725 5474968896377909725->5971914703747761542 8987619277604407700 IDR Plot rep1_vs_rep2 5980475539602106293->8987619277604407700 3224498181077512401 IDR NPeak rep1_vs_rep2 5980475539602106293->3224498181077512401 3224498181077512401->5971914703747761542 -5997779283363293693 Overlap Peak rep1_vs_rep2 -3669264197363424591->-5997779283363293693 -5997779283363293693->8416730863323394945 6569201305128880267 Overlap Peak optimal 8416730863323394945->6569201305128880267 -5279248713268340740 Overlap reproducibility 8416730863323394945->-5279248713268340740 -3314247101261436056 IDR Peak optimal 5971914703747761542->-3314247101261436056 -1763412853207866177 IDR reproducibility 5971914703747761542->-1763412853207866177 -2528459733911930683 Overlap Peak ppr 3694477400097518774->-2528459733911930683 -2528459733911930683->8416730863323394945 1201407395791098564 JSD Plot 1509214505103176907->1201407395791098564

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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