File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF271YPD.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF271YPD.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF271YPD.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF271YPD.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF271YPD.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF031VYK.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF031VYK.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF031VYK.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF031VYK.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031VYK.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF271YPD.crop_101-2bp.nodup.pr1_x_ctl.pooled.429M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF271YPD.crop_101-2bp.nodup.pr2_x_ctl.pooled.429M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF271YPD.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF271YPD.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF271YPD.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF271YPD.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF271YPD.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF271YPD.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF031VYK.crop_101-2bp.nodup.pr1_x_ctl.pooled.378M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF031VYK.crop_101-2bp.nodup.pr2_x_ctl.pooled.378M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF031VYK.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF031VYK.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF031VYK.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF031VYK.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF031VYK.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF031VYK.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF271YPD.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/ad2ef46c-c96a-4663-855c-0d96c2928be4/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF271YPD.crop_101-2bp.nodup_x_ctl.pooled.429M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/8609232f-b98e-4ee8-95e4-89ce4f66d2d1/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF031VYK.crop_101-2bp.nodup_x_ctl.pooled.378M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 1278776944298947177 chip.macs2_signal_track_pooled 6549245888305005616 BW FC 1278776944298947177->6549245888305005616 -7106300334538547836 BW p-val 1278776944298947177->-7106300334538547836 2487936430740067756 chip.call_peak_pooled -624265374115673712 Peak (bfilt) 2487936430740067756->-624265374115673712 -3617404809899444508 Peak 2487936430740067756->-3617404809899444508 -3531261207494798872 chip.idr_ppr -3617404809899444508->-3531261207494798872 -2199365013407127126 chip.idr -3617404809899444508->-2199365013407127126 -4132798838170695847 chip.overlap -3617404809899444508->-4132798838170695847 7355727798283091726 chip.overlap_ppr -3617404809899444508->7355727798283091726 -50790553655210545 chip.pool_ta 4202011253008422977 TAG-ALIGN -50790553655210545->4202011253008422977 4202011253008422977->1278776944298947177 4202011253008422977->2487936430740067756 4202011253008422977->-3531261207494798872 4202011253008422977->-2199365013407127126 4202011253008422977->-4132798838170695847 4202011253008422977->7355727798283091726 750387591519543254 chip.call_peak -1046232498320576445 Peak (bfilt) 750387591519543254->-1046232498320576445 4409282019547931326 Peak 750387591519543254->4409282019547931326 4409282019547931326->-2199365013407127126 4409282019547931326->-4132798838170695847 2688776950859389582 chip.reproducibility_overlap 4409282019547931326->2688776950859389582 -8322442206326073630 chip.reproducibility_idr 4409282019547931326->-8322442206326073630 6281128787129319723 chip.bam2ta 4282943537029983372 TAG-ALIGN 6281128787129319723->4282943537029983372 4282943537029983372->-50790553655210545 4282943537029983372->750387591519543254 1889470960707764280 chip.macs2_signal_track 4282943537029983372->1889470960707764280 4282943537029983372->-3531261207494798872 4282943537029983372->2688776950859389582 4282943537029983372->-8322442206326073630 4282943537029983372->7355727798283091726 -1860872926896530640 chip.filter 2739488324442596142 SAMstats QC -1860872926896530640->2739488324442596142 1042975968960319050 Filt/deduped BAM -1860872926896530640->1042975968960319050 5348607489192529913 LibCmplx QC -1860872926896530640->5348607489192529913 1042975968960319050->6281128787129319723 8999643886691491602 chip.jsd 1042975968960319050->8999643886691491602 1392557888643530148 chip.align 327243483995969748 SAMstats QC 1392557888643530148->327243483995969748 -2355356144144135790 BAM 1392557888643530148->-2355356144144135790 -2355356144144135790->-1860872926896530640 1451485242539216807 chip.xcor -6024593082807426048 XCOR Plot 1451485242539216807->-6024593082807426048 -1612727793487073172 BW FC 1889470960707764280->-1612727793487073172 -5512497726994566654 BW p-val 1889470960707764280->-5512497726994566654 9206594305946848264 FASTQ R1 (1) 9206594305946848264->1392557888643530148 9206594305946848264->1451485242539216807 -5527820690976635606 FASTQ R2 (1) -5527820690976635606->1392557888643530148 4678527987742706092 chip.call_peak 2809424107717887519 Peak (bfilt) 4678527987742706092->2809424107717887519 -5270509614681295953 Peak 4678527987742706092->-5270509614681295953 -5270509614681295953->-2199365013407127126 -5270509614681295953->-4132798838170695847 -5270509614681295953->2688776950859389582 -5270509614681295953->-8322442206326073630 5220742454434060083 chip.bam2ta -7000121457262074175 TAG-ALIGN 5220742454434060083->-7000121457262074175 -7000121457262074175->-50790553655210545 -7000121457262074175->4678527987742706092 3346950062797707886 chip.macs2_signal_track -7000121457262074175->3346950062797707886 -7000121457262074175->-3531261207494798872 -7000121457262074175->2688776950859389582 -7000121457262074175->-8322442206326073630 -7000121457262074175->7355727798283091726 -6521012642392276799 chip.filter 470864502577437732 SAMstats QC -6521012642392276799->470864502577437732 -5373635181435553018 Filt/deduped BAM -6521012642392276799->-5373635181435553018 -9212536343883117325 LibCmplx QC -6521012642392276799->-9212536343883117325 -5373635181435553018->5220742454434060083 -5373635181435553018->8999643886691491602 -9057352864228153553 chip.align -9133599737422273323 SAMstats QC -9057352864228153553->-9133599737422273323 -3034512820939898854 BAM -9057352864228153553->-3034512820939898854 -3034512820939898854->-6521012642392276799 -1990329285193545949 chip.xcor -2224678606954671512 XCOR Plot -1990329285193545949->-2224678606954671512 3464483918808685210 BW FC 3346950062797707886->3464483918808685210 -977757421304189469 BW p-val 3346950062797707886->-977757421304189469 -3524561085721091862 FASTQ R1 (1) -3524561085721091862->-9057352864228153553 -3524561085721091862->-1990329285193545949 7518781951758703070 FASTQ R2 (1) 7518781951758703070->-9057352864228153553 -4582698765842348543 chip.pool_ta_ctl -1387936883929193824 TAG-ALIGN -4582698765842348543->-1387936883929193824 -1387936883929193824->1278776944298947177 -1387936883929193824->2487936430740067756 -1387936883929193824->750387591519543254 -1387936883929193824->1889470960707764280 -1387936883929193824->4678527987742706092 -1387936883929193824->3346950062797707886 -1387936883929193824->-3531261207494798872 -1387936883929193824->2688776950859389582 -1387936883929193824->-8322442206326073630 -1387936883929193824->7355727798283091726 -3541389471386862035 chip.bam2ta_ctl 6191500231625192379 TAG-ALIGN -3541389471386862035->6191500231625192379 6191500231625192379->-4582698765842348543 -6192043848977329283 Filt/deduped BAM -6192043848977329283->-3541389471386862035 -6192043848977329283->8999643886691491602 8591558124229440860 chip.bam2ta_ctl 7338282594877226806 TAG-ALIGN 8591558124229440860->7338282594877226806 7338282594877226806->-4582698765842348543 5250157859862540496 Filt/deduped BAM 5250157859862540496->8591558124229440860 5250157859862540496->8999643886691491602 -2747269330560129956 chip.bam2ta_ctl -6445939004388660811 TAG-ALIGN -2747269330560129956->-6445939004388660811 -6445939004388660811->-4582698765842348543 -3260886196992506500 Filt/deduped BAM -3260886196992506500->-2747269330560129956 -3260886196992506500->8999643886691491602 -80465342922617530 chip.bam2ta_ctl -2679615032624888077 TAG-ALIGN -80465342922617530->-2679615032624888077 -2679615032624888077->-4582698765842348543 5746648292355790995 Filt/deduped BAM 5746648292355790995->-80465342922617530 5746648292355790995->8999643886691491602 6409537295498910254 chip.bam2ta_ctl -1858275583651507380 TAG-ALIGN 6409537295498910254->-1858275583651507380 -1858275583651507380->-4582698765842348543 2583475293987227899 Filt/deduped BAM 2583475293987227899->6409537295498910254 2583475293987227899->8999643886691491602 2007789744116477227 chip.bam2ta_ctl 7860390732349056565 TAG-ALIGN 2007789744116477227->7860390732349056565 7860390732349056565->-4582698765842348543 -1470265627793858726 Filt/deduped BAM -1470265627793858726->2007789744116477227 -1470265627793858726->8999643886691491602 1936537912666012352 IDR Plot ppr -3531261207494798872->1936537912666012352 4074589141111708614 IDR Peak ppr -3531261207494798872->4074589141111708614 4074589141111708614->-8322442206326073630 5614845818260758873 IDR Plot rep1_vs_rep2 -2199365013407127126->5614845818260758873 8287937686521554114 IDR NPeak rep1_vs_rep2 -2199365013407127126->8287937686521554114 8287937686521554114->-8322442206326073630 -6696567243567487758 Overlap Peak rep1_vs_rep2 -4132798838170695847->-6696567243567487758 -6696567243567487758->2688776950859389582 -6937939405162888453 Overlap Peak optimal 2688776950859389582->-6937939405162888453 3662714827144455247 Overlap reproducibility 2688776950859389582->3662714827144455247 -7943317762484297033 IDR Peak optimal -8322442206326073630->-7943317762484297033 5322329664101566956 IDR reproducibility -8322442206326073630->5322329664101566956 5516578094934531783 Overlap Peak ppr 7355727798283091726->5516578094934531783 5516578094934531783->2688776950859389582 -4971977424574587777 JSD Plot 8999643886691491602->-4971977424574587777

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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