File table

Expand all    Collapse all

Files	Path
Alignment
Control 1
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF585IQN.tagAlign.gz
Control 10
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-9/glob-199637d3015dccbe277f621a18be9eb4/ENCFF919EDN.tagAlign.gz
Control 11
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-10/glob-199637d3015dccbe277f621a18be9eb4/ENCFF489ERC.tagAlign.gz
Control 12
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-11/glob-199637d3015dccbe277f621a18be9eb4/ENCFF533HJT.tagAlign.gz
Control 13
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-12/glob-199637d3015dccbe277f621a18be9eb4/ENCFF451CVJ.tagAlign.gz
Control 14
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-13/glob-199637d3015dccbe277f621a18be9eb4/ENCFF383QIP.tagAlign.gz
Control 15
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-14/glob-199637d3015dccbe277f621a18be9eb4/ENCFF905YEA.tagAlign.gz
Control 16
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-15/glob-199637d3015dccbe277f621a18be9eb4/ENCFF785BTW.tagAlign.gz
Control 17
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-16/glob-199637d3015dccbe277f621a18be9eb4/ENCFF709TVD.tagAlign.gz
Control 18
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-17/glob-199637d3015dccbe277f621a18be9eb4/ENCFF928CJD.tagAlign.gz
Control 19
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-18/glob-199637d3015dccbe277f621a18be9eb4/ENCFF528DFI.tagAlign.gz
Control 2
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF847EHD.tagAlign.gz
Control 20
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-19/glob-199637d3015dccbe277f621a18be9eb4/ENCFF482RWP.tagAlign.gz
Control 21
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-20/glob-199637d3015dccbe277f621a18be9eb4/ENCFF736OSY.tagAlign.gz
Control 22
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-21/glob-199637d3015dccbe277f621a18be9eb4/ENCFF490JCT.tagAlign.gz
Control 23
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-22/glob-199637d3015dccbe277f621a18be9eb4/ENCFF856XMU.tagAlign.gz
Control 24
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-23/glob-199637d3015dccbe277f621a18be9eb4/ENCFF949NGG.tagAlign.gz
Control 3
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF800IMV.tagAlign.gz
Control 4
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF190AZK.tagAlign.gz
Control 5
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF500XPF.tagAlign.gz
Control 6
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF654JHZ.tagAlign.gz
Control 7
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-6/glob-199637d3015dccbe277f621a18be9eb4/ENCFF065LBX.tagAlign.gz
Control 8
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/bafc5cac-d8ee-4733-a250-790bee628b7c/call-bam2ta_ctl/shard-7/glob-199637d3015dccbe277f621a18be9eb4/ENCFF425NTG.tagAlign.gz
Control 9
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-bam2ta_ctl/shard-8/glob-199637d3015dccbe277f621a18be9eb4/ENCFF705BZZ.tagAlign.gz
Pooled control
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/d1d58f91-c596-4a49-aa5c-1993eac96a9b/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF685PQB.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF685PQB.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF685PQB.crop_101-2bp.nodup.bam
Raw BAM from aligner	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF685PQB.crop_101-2bp.bam
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF685PQB.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF629DEC.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF629DEC.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF629DEC.crop_101-2bp.nodup.bam
Raw BAM from aligner	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF629DEC.crop_101-2bp.bam
TAG-ALIGN	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF629DEC.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.471M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.471M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.471M.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF685PQB.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF685PQB.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF685PQB.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF685PQB.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF685PQB.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF685PQB.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF685PQB.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF685PQB.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF629DEC.crop_101-2bp.nodup.pr1_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF629DEC.crop_101-2bp.nodup.pr1_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF629DEC.crop_101-2bp.nodup.pr1_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF629DEC.crop_101-2bp.nodup.pr1_x_ctl.pooled.200M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF629DEC.crop_101-2bp.nodup.pr2_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF629DEC.crop_101-2bp.nodup.pr2_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF629DEC.crop_101-2bp.nodup.pr2_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF629DEC.crop_101-2bp.nodup.pr2_x_ctl.pooled.200M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeak	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR log	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plot	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.471M.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR log	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plot	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR log	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plot	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF685PQB.crop_101-2bp.nodup.pr1_x_ctl.pooled.336M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF685PQB.crop_101-2bp.nodup.pr2_x_ctl.pooled.336M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plot	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF685PQB.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation score	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF685PQB.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF685PQB.crop_101-2bp.dup.qc
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF685PQB.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF685PQB.crop_101-2bp.samstats.qc
SAMstats log for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF685PQB.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR log	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plot	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF629DEC.crop_101-2bp.nodup.pr1_x_ctl.pooled.200M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF629DEC.crop_101-2bp.nodup.pr2_x_ctl.pooled.200M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plot	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF629DEC.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation score	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF629DEC.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF629DEC.crop_101-2bp.dup.qc
Fraction of peaks in reads	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF629DEC.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF629DEC.crop_101-2bp.samstats.qc
SAMstats log for filtered BAM	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF629DEC.crop_101-2bp.nodup.samstats.qc
Final HTML report	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON file	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plot	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF685PQB.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaks	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaks	gs://encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.471M.fc.signal.bigwig
MACS2 signal track (p-val)	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.471M.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.fc.signal.bigwig
MACS2 signal track (p-val)	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.fc.signal.bigwig
MACS2 signal track (p-val)	gs://encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.pval.signal.bigwig

track type=bigWig name="MACS2 p-val (rep1)" priority=1 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.pval.signal.bigwig?Expires=1601335767&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=fs2IUwuRCeavNyXWhrPeJ6omxokWaMJFkOHQWCR3LBfl4d%2BwJ5sFmFtu0zd0OwWwHj1rkRItjCD%2F8ofsu5wkpRbkG53pGiM2THyHJpXEZEsEEHHQMCd8nZYEVc6ysDM8TjxHpeWeFQcGq67w9b5nPlsTVn2Sau9ubrvyU%2BF5nX0sShRyBGonjF6OEHz0riOWpApGUE64DLeK2RiW4bkfbv5x7T7RGdeNmtw7XCb7hNEDrtuPCWBkPeuM%2FWPxurJrZ1gTDOSBl%2FJ5E9JBS2%2FTJ6bqc3LuTddxfPyHsOXTmf4MLfTQkYsiW639%2BsFUtNU%2BEO4hChHU4yHjlG4yy5y7Lw%3D%3D"
track type=bigWig name="MACS2 p-val (rep2)" priority=2 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.pval.signal.bigwig?Expires=1601335767&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=ZH1FOm%2FlxA9IXULymv3pLM7OAOFjF1cMhR1%2B5crU7ptPoDbN6iTTaMA0Sh631ujA89pi14VUubpL8PAVqabAYQ8vS0svA%2Fom%2BIOvp71%2FUZuzmIEnvZpKc5EqRHp5dJU5VEduVXUXDgMOMoeO5XCRMY1l1AzOQ8hOZ4o6OUDVogur69exbcDx2nTkwsGwE%2FzOCIwhCJkSkm1aiLT8H6O6WlTnnOQ6L%2FZqpSmKLZTN1MWljDdb8%2FXqVELy641gbfsOss9j0iz1BkytU9mZnrGp%2B83KfbmLt7QNz3MO4fPYxiOOS%2FShHKj7oOt0OMjPrMXXs9YnPcT6jyE96ug6YBTAWA%3D%3D"
track type=bigWig name="MACS2 fc (rep1)" priority=1 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF685PQB.crop_101-2bp.nodup_x_ctl.pooled.336M.fc.signal.bigwig?Expires=1601335767&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=wLvuNuc9NHIMdvN3fgeTcmrcRn%2Bm%2FFezn9eghEegaP4UzCPgcAzDv9onNMUv68aRyUdaCDqqU086Hxmg%2BDaJ8MR41wgRlbOVIAdXhHfBQGyEK4zhceCxJre%2FLn8p%2Fw%2BFWHD%2BnnNNHqwNAaPkTzVsnBYPgL1dpZmGmwiwmA7%2FNd0M9HewBrK%2F8dVx%2BXIxhLmiLT2GXMGvymBWN6hqk2DK%2F5F6lr3WDV8Gi%2FGp24KmbYQKMPq8xUGg8aPL1S4OyJMcd4TWYtCiy1cDXvSdtC5ZH2Wx80VMhBXNeuWvvqi%2FkisEV7v5p%2FiwlaghzUfxDNN0UEelvQzdSrBbPchTYtYUfg%3D%3D"
track type=bigWig name="MACS2 fc (rep2)" priority=2 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF629DEC.crop_101-2bp.nodup_x_ctl.pooled.200M.fc.signal.bigwig?Expires=1601335767&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=aehXq6USPo9vIkwSMnMNk6J%2F4RhgyJqN0RjJc0vflPoAsMfMvkCNYfFvx49DgdBYq7MnlYkfvKcwUznmBkv3K7c0rZbxQsB9qpfOJAYUFmSBomYruJKIRzRoNBZb9LBBZnalsY8GA%2FmfsV7kkR9%2BZPdDuJz8cLFgKunZtQtqtfxAwI3shDBCyB2WGFaH9v2SDODm7ANHkod%2ByALzwMcTwViNbpP54oS8e6LHsYM8Y8imTZ3re1RBL8sX8cdkksBCC%2FVNSfglvNUlQTJkMiI5%2BHJwZ6MmE2XhI%2FLMC4NF2zqAE3JX%2F6MSQXg3utdeASO3%2BymfxqqldaIO8ckrBsZFlg%3D%3D"
track type=bigWig name="MACS2 p-val (pooled)" priority=0 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.471M.pval.signal.bigwig?Expires=1601335767&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=s7miz7oE8TMLCQ6K0BzLABNtHW7s%2Bvn4MmwJw7V3vPt6%2FKDUfRI8qbRl97RSipf0RsN11Ba%2FDtqpUHi1ApA5UY8X2CZk73xS%2FLd%2FG3%2BbMQGQau0aFp9m7d3f2PABwMNb%2BI%2FNXjAEvvfjd5YPgx%2FI7p1%2FU90KwQ2BWLbcjVK1rffZg4TYQRuUmPi9zAazNtlfTpavMGuvVut74YGEkl26d9u%2B3G7Ty4%2B477zVT5FIcOq8iJwP7q0%2BVcQD2W7wJN5pTAKs4H1wGg7mRrCRXJ3z9jfBeZq2ItKoLplk%2Fza92MVdowdME%2FxGJT11y4wk%2B8bQKi%2B7jOxHzlq30qbYfWAcZA%3D%3D"
track type=bigWig name="MACS2 fc (pooled)" priority=0 smoothingWindow=off maxHeightPixels=80:60:40 color=255,0,0 autoScale=off viewLimits=0:40 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/cb2243be-ecc1-4dea-a23c-463d26a68890/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.471M.fc.signal.bigwig?Expires=1601335768&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=aLvi8HE3waEiaNRGONGHQooPuhej2H9tFWM9ymbj%2BTYgBA22MdwlSJmMk%2Fl%2Bwx2guj23l9vzftpJ8cXnIDrShR2hJTgb7%2B2yGjsTBdM4ueQbTKQVdh81%2B0pOxp9G2duYt%2B2eF2R35ViG0LXmW0SHtzVA8siwpC3kREaHZukmdGLuwdMapbb82ZArOZKfBkhSWZvPK4QkYxr3V1H6xr%2Ba7r%2FMayWcDEBTbRKVOLEGeuUeMDh1hhYwq11LLDCzOn4ya8bchJz27IurpSgAerg8ZYQKSb02qWavl9ZwU59GsFqPTnBZkdOjeSaDq4%2BOJDm9Nj1yIvT%2FCW7x%2BM7AhldR8Q%3D%3D"
track type=bigBed name="Optimal IDR peak" priority=100 color=0,0,255 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb?Expires=1601335775&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=lQgEbGiWHRaqlrHwSmy9fJrLZqCf%2BAqH6fQCCR2UNqa%2BYfT9gbV0ZyY90o7MowIXsYAMvIBxIonBOQf36Ipcwvu5JGWSMGmaBEvsKQDwihTEtpKN6bzmsWUeiKB0u2hVDeIuFMxv7hkfrXB4kiVaCiglVi3kvihE%2Fs0KbuwIHJDTzQrRzrVCe4KOTLCyYVpnAAOl9B3bApJ0GmYBf0ZuAia6aRz%2FoEGEndxsoFgXaD%2FhIXkYI3woNnahFXnjjjH%2F4MRxl1EB3sEDHh0R3AQN6ZBHZo3GwbMV82zwU8%2FqgZH9xyqJBXTQdlLYwvDlBUswkupjjfsdLCCQarLQdE5K3Q%3D%3D"
track type=bigBed name="Conservative IDR peak" priority=100 color=0,0,255 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb?Expires=1601335775&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=O52udcl33EiYnY%2F8EuNbmXlhR4YaU88WsMXCbMd5sYNUR2GKYHizOaU12ymbX22wQjR%2F72DN%2BXHkqBszJU4zPRl0TsUE%2FXLrZb1avBsSfCoNmY5ZrnHzAwnemy8%2FRQF6siWvBjk5zfb9uJW7gg97Kf1VeG%2B67WpOiPixAzWROVclG%2BmptYS26biUTdKquWtQsEnwM%2FLX9HRcQgXgybZK%2FWOQf47PSenXhx51RcF7b88ukkT5TqPPFvKYIQX6DQpAUn1Uvu4NUPMQ5rxglf%2FAMqTCcqJnl2guo%2F1BcY4RaqjmjJOLsM3fflMCuyfZsnbgxU%2B3MQw12lbx7H%2FDqZKT9A%3D%3D"
track type=bigBed name="Optimal overlap peak" priority=100 color=0,0,255 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb?Expires=1601335776&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=SXmGAEDFTbcPk0yBilVF1fmMqQ5%2BAt4v8fFO3ygS7eBFE37au%2F5Vdmjklyblszemh8098UYo6%2FDiGRqoCU%2BiybfHzlz4MYktZn1%2FlkPsb7SvWBDQQVYNa0U6FCZISPK4klawWHVzNDM9mCzwdtVkdGaeIQ088g0%2FFzsHqW%2F0jp%2F5UeYanHS7r9s4fombG4u%2FArNQGMpITGXOPvujY3Hkpmq6uRYeWvKISAyG%2B2bG3DQA760uEh4gGSbj8cPoFmIquPJXmrKHoBjsOUTZPfBC7bXmR7jSC3FCWaYRlsbS11KCJ02bAbzXsNTAUBbetGGzoyr5slCIxNOtpeAsIZ1FDg%3D%3D"
track type=bigBed name="Conservative overlap peak" priority=100 color=0,0,255 visibility=full bigDataUrl="https://storage.googleapis.com/encode-processing/caper_out_v8_20/chip/f5d7b512-577f-41c6-b29e-a0c7b8d8d2cc/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb?Expires=1601335776&GoogleAccessId=encode-processing-caper-server%40encode-processing.iam.gserviceaccount.com&Signature=n2TNhy8tJWTgFVs84swsNHbjLvBIvL5is6YizPFK9GKSkRF5xGllIolpelKdKzrnHlXjLMQNqqKPnZZPmAeKEzaSmB0tW%2BvploLGSGHsWShRuIFc%2FpIwakEoIdnRFoue1RAqhxdDMk08pUvFCjgsfbB1T5cwBfS5hSKMqm8Tab7Hv90KyjWkGmvvYos8AX9E8q6JYTec6SUk17WfTALVEZcXTsinmkp8T9SITn4W3HYshf7dLSk0HUuuAsaE008avMLb7slCorvwE5tK1578JydFR6W5GmHGd6nK5XQNw5dicPDqdXAlxdYS%2F9Kj%2BOajCgJmd1MtKC%2BoW%2FsPXqtA%2FQ%3D%3D"