File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF572AYV.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF572AYV.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF572AYV.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF572AYV.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF572AYV.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF291MOB.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF291MOB.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF291MOB.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF291MOB.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF291MOB.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF572AYV.crop_101-2bp.nodup.pr1_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF572AYV.crop_101-2bp.nodup.pr1_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF572AYV.crop_101-2bp.nodup.pr1_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF572AYV.crop_101-2bp.nodup.pr1_x_ctl.pooled.390M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF572AYV.crop_101-2bp.nodup.pr2_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF572AYV.crop_101-2bp.nodup.pr2_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF572AYV.crop_101-2bp.nodup.pr2_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF572AYV.crop_101-2bp.nodup.pr2_x_ctl.pooled.390M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF572AYV.crop_101-2bp.nodup_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF572AYV.crop_101-2bp.nodup_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF572AYV.crop_101-2bp.nodup_x_ctl.pooled.390M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF572AYV.crop_101-2bp.nodup_x_ctl.pooled.390M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF291MOB.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF291MOB.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF291MOB.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF291MOB.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF291MOB.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF291MOB.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF291MOB.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF291MOB.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF291MOB.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF291MOB.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF291MOB.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF291MOB.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF572AYV.crop_101-2bp.nodup.pr1_x_ctl.pooled.390M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF572AYV.crop_101-2bp.nodup.pr2_x_ctl.pooled.390M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF572AYV.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF572AYV.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF572AYV.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF572AYV.crop_101-2bp.nodup_x_ctl.pooled.390M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF572AYV.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF572AYV.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF572AYV.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF291MOB.crop_101-2bp.nodup.pr1_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF291MOB.crop_101-2bp.nodup.pr2_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF291MOB.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF291MOB.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF291MOB.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF291MOB.crop_101-2bp.nodup_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF291MOB.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF291MOB.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF291MOB.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF572AYV.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/38f7ef99-6d5d-42f7-8704-6f2c443030a5/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF572AYV.crop_101-2bp.nodup_x_ctl.pooled.390M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF572AYV.crop_101-2bp.nodup_x_ctl.pooled.390M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF291MOB.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/52339320-42de-4689-9a38-89afda69d2bf/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF291MOB.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 -144707409727388342 chip.macs2_signal_track_pooled -7076336534395957411 BW FC -144707409727388342->-7076336534395957411 -6850618395597913122 BW p-val -144707409727388342->-6850618395597913122 -2549669422400625511 chip.call_peak_pooled -7470922874138321386 Peak (bfilt) -2549669422400625511->-7470922874138321386 1581901627997359774 Peak -2549669422400625511->1581901627997359774 -5388092064134355619 chip.idr_ppr 1581901627997359774->-5388092064134355619 3997554980102185102 chip.idr 1581901627997359774->3997554980102185102 -8286180582018331058 chip.overlap 1581901627997359774->-8286180582018331058 -1525852522139682682 chip.overlap_ppr 1581901627997359774->-1525852522139682682 -6761511152929843455 chip.pool_ta 5428057693809654574 TAG-ALIGN -6761511152929843455->5428057693809654574 5428057693809654574->-144707409727388342 5428057693809654574->-2549669422400625511 5428057693809654574->-5388092064134355619 5428057693809654574->3997554980102185102 5428057693809654574->-8286180582018331058 5428057693809654574->-1525852522139682682 1177970665066927301 chip.call_peak -8822260796987623610 Peak (bfilt) 1177970665066927301->-8822260796987623610 -1894712265335912423 Peak 1177970665066927301->-1894712265335912423 -1894712265335912423->3997554980102185102 -1894712265335912423->-8286180582018331058 -6117508179912548987 chip.reproducibility_overlap -1894712265335912423->-6117508179912548987 744325392408483983 chip.reproducibility_idr -1894712265335912423->744325392408483983 -2383066952301895528 chip.bam2ta -8771163533689767945 TAG-ALIGN -2383066952301895528->-8771163533689767945 -8771163533689767945->-6761511152929843455 -8771163533689767945->1177970665066927301 5231652918415474348 chip.macs2_signal_track -8771163533689767945->5231652918415474348 -8771163533689767945->-5388092064134355619 -8771163533689767945->-6117508179912548987 -8771163533689767945->744325392408483983 -8771163533689767945->-1525852522139682682 -8809331199736651522 chip.filter 8358155055760377219 SAMstats QC -8809331199736651522->8358155055760377219 -9169501598613426200 Filt/deduped BAM -8809331199736651522->-9169501598613426200 3240759205014799938 LibCmplx QC -8809331199736651522->3240759205014799938 -9169501598613426200->-2383066952301895528 -8190212266726501332 chip.jsd -9169501598613426200->-8190212266726501332 6508303798238592806 chip.align -3918046615459763236 SAMstats QC 6508303798238592806->-3918046615459763236 -1749427855650221512 BAM 6508303798238592806->-1749427855650221512 -1749427855650221512->-8809331199736651522 -3337366583635673813 chip.xcor -809988058268950507 XCOR Plot -3337366583635673813->-809988058268950507 9074493083474716089 BW FC 5231652918415474348->9074493083474716089 8654385103667639548 BW p-val 5231652918415474348->8654385103667639548 2376666442840265767 FASTQ R1 (1) 2376666442840265767->6508303798238592806 2376666442840265767->-3337366583635673813 -6841865912214656767 FASTQ R2 (1) -6841865912214656767->6508303798238592806 3761044049701052251 chip.call_peak -3757584323581224971 Peak (bfilt) 3761044049701052251->-3757584323581224971 983055639519945417 Peak 3761044049701052251->983055639519945417 983055639519945417->3997554980102185102 983055639519945417->-8286180582018331058 983055639519945417->-6117508179912548987 983055639519945417->744325392408483983 6825402055190772538 chip.bam2ta -9070575231054893918 TAG-ALIGN 6825402055190772538->-9070575231054893918 -9070575231054893918->-6761511152929843455 -9070575231054893918->3761044049701052251 6131203066117826310 chip.macs2_signal_track -9070575231054893918->6131203066117826310 -9070575231054893918->-5388092064134355619 -9070575231054893918->-6117508179912548987 -9070575231054893918->744325392408483983 -9070575231054893918->-1525852522139682682 -2224704727299726281 chip.filter -7302092001257525321 SAMstats QC -2224704727299726281->-7302092001257525321 -3048764762079086678 Filt/deduped BAM -2224704727299726281->-3048764762079086678 5823787932995543365 LibCmplx QC -2224704727299726281->5823787932995543365 -3048764762079086678->6825402055190772538 -3048764762079086678->-8190212266726501332 -550958339495293378 chip.align 1110075381026949304 SAMstats QC -550958339495293378->1110075381026949304 8272709705951412567 BAM -550958339495293378->8272709705951412567 8272709705951412567->-2224704727299726281 5596935409355606397 chip.xcor -6515809357302314266 XCOR Plot 5596935409355606397->-6515809357302314266 5324192921452151229 BW FC 6131203066117826310->5324192921452151229 -47789911323732927 BW p-val 6131203066117826310->-47789911323732927 -8794961645999888677 FASTQ R1 (1) -8794961645999888677->-550958339495293378 -8794961645999888677->5596935409355606397 -8410281609262803776 FASTQ R2 (1) -8410281609262803776->-550958339495293378 6503239553448039317 chip.pool_ta_ctl -6024500003622070762 TAG-ALIGN 6503239553448039317->-6024500003622070762 -6024500003622070762->-144707409727388342 -6024500003622070762->-2549669422400625511 -6024500003622070762->1177970665066927301 -6024500003622070762->5231652918415474348 -6024500003622070762->3761044049701052251 -6024500003622070762->6131203066117826310 -6024500003622070762->-5388092064134355619 -6024500003622070762->-6117508179912548987 -6024500003622070762->744325392408483983 -6024500003622070762->-1525852522139682682 8256546644896430061 chip.bam2ta_ctl 4228477251346868363 TAG-ALIGN 8256546644896430061->4228477251346868363 4228477251346868363->6503239553448039317 -297468254118112042 Filt/deduped BAM -297468254118112042->8256546644896430061 -297468254118112042->-8190212266726501332 8382761048076136816 chip.bam2ta_ctl 3973915926104560806 TAG-ALIGN 8382761048076136816->3973915926104560806 3973915926104560806->6503239553448039317 7912238610739120263 Filt/deduped BAM 7912238610739120263->8382761048076136816 7912238610739120263->-8190212266726501332 8065562582904533480 chip.bam2ta_ctl 6689788908577034288 TAG-ALIGN 8065562582904533480->6689788908577034288 6689788908577034288->6503239553448039317 -1009583494611768 Filt/deduped BAM -1009583494611768->8065562582904533480 -1009583494611768->-8190212266726501332 4699759272056303634 chip.bam2ta_ctl 6680659089894996763 TAG-ALIGN 4699759272056303634->6680659089894996763 6680659089894996763->6503239553448039317 -6220262013561702488 Filt/deduped BAM -6220262013561702488->4699759272056303634 -6220262013561702488->-8190212266726501332 3768556895569982026 chip.bam2ta_ctl 937337754125699477 TAG-ALIGN 3768556895569982026->937337754125699477 937337754125699477->6503239553448039317 6735571669900337031 Filt/deduped BAM 6735571669900337031->3768556895569982026 6735571669900337031->-8190212266726501332 -4935822594650389039 chip.bam2ta_ctl -7858493199227827660 TAG-ALIGN -4935822594650389039->-7858493199227827660 -7858493199227827660->6503239553448039317 -1772211413559379644 Filt/deduped BAM -1772211413559379644->-4935822594650389039 -1772211413559379644->-8190212266726501332 -5002714183710811776 IDR Plot ppr -5388092064134355619->-5002714183710811776 -3786633534444470453 IDR Peak ppr -5388092064134355619->-3786633534444470453 -3786633534444470453->744325392408483983 1105853480359999758 IDR Plot rep1_vs_rep2 3997554980102185102->1105853480359999758 -646041772163259513 IDR NPeak rep1_vs_rep2 3997554980102185102->-646041772163259513 -646041772163259513->744325392408483983 2378315942515515428 Overlap Peak rep1_vs_rep2 -8286180582018331058->2378315942515515428 2378315942515515428->-6117508179912548987 866643437674719354 Overlap Peak optimal -6117508179912548987->866643437674719354 -6563642727407207148 Overlap reproducibility -6117508179912548987->-6563642727407207148 2869348854184386493 IDR Peak optimal 744325392408483983->2869348854184386493 -2425215139365305200 IDR reproducibility 744325392408483983->-2425215139365305200 2895145520738994146 Overlap Peak ppr -1525852522139682682->2895145520738994146 2895145520738994146->-6117508179912548987 -7306951689709753875 JSD Plot -8190212266726501332->-7306951689709753875

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
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