File table
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FilesPath
Alignment
Control 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF350INM.tagAlign.gz
Control 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF031UZD.tagAlign.gz
Control 3
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-2/glob-199637d3015dccbe277f621a18be9eb4/ENCFF713QSG.tagAlign.gz
Control 4
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-3/glob-199637d3015dccbe277f621a18be9eb4/ENCFF300ATN.tagAlign.gz
Control 5
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-bam2ta_ctl/shard-4/glob-199637d3015dccbe277f621a18be9eb4/ENCFF852BFO.tagAlign.gz
Control 6
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/0dc84c9c-abd4-4d58-a4fb-7c9a709966bc/call-bam2ta_ctl/shard-5/glob-199637d3015dccbe277f621a18be9eb4/ENCFF036EBY.tagAlign.gz
Pooled control
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/05dadee1-3e67-4bb5-91da-91fcf666e903/call-pool_ta_ctl/glob-199637d3015dccbe277f621a18be9eb4/ctl.pooled.tagAlign.gz
Pooled replicate
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-pool_ta_pr1/glob-199637d3015dccbe277f621a18be9eb4/rep-pr1.pooled.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-pool_ta_pr2/glob-199637d3015dccbe277f621a18be9eb4/rep-pr2.pooled.tagAlign.gz
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-pool_ta/glob-199637d3015dccbe277f621a18be9eb4/rep.pooled.tagAlign.gz
Replicate 1
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-spr/shard-0/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF426JLQ.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-spr/shard-0/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF426JLQ.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF426JLQ.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF426JLQ.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-bam2ta/shard-0/glob-199637d3015dccbe277f621a18be9eb4/ENCFF426JLQ.crop_101-2bp.nodup.tagAlign.gz
Replicate 2
Pseudoreplicate 1
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-spr/shard-1/glob-478c0ad30d0d033ce59a75ef84dab32e/ENCFF901MLH.crop_101-2bp.nodup.pr1.tagAlign.gz
Pseudoreplicate 2
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-spr/shard-1/glob-a7cc663e5a8a49cc3d9bc036f4370f1c/ENCFF901MLH.crop_101-2bp.nodup.pr2.tagAlign.gz
Filtered BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-filter/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF901MLH.crop_101-2bp.nodup.bam
Raw BAM from alignergs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-align/shard-1/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF901MLH.crop_101-2bp.bam
TAG-ALIGNgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-bam2ta/shard-1/glob-199637d3015dccbe277f621a18be9eb4/ENCFF901MLH.crop_101-2bp.nodup.tagAlign.gz
Peak
IDR reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_idr/glob-aae3f88ec555ee05b83e37921e9eb318/idr.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_idr/glob-f628f97804061610489fb3df14b8b3f0/idr.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_idr/glob-29708b5a00e414f63a187d12af34d0d2/idr.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_idr/glob-240c97f2273cc92383b551c4d2655be9/idr.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_idr/glob-fe7dae7ccfff8f80b0a121847139e130/idr.optimal_peak.narrowPeak.hammock.gz
Overlap reproducibility
Conservative peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_overlap/glob-aae3f88ec555ee05b83e37921e9eb318/overlap.conservative_peak.narrowPeak.gz
Conservative peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_overlap/glob-f628f97804061610489fb3df14b8b3f0/overlap.conservative_peak.narrowPeak.bb
Conservative peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_overlap/glob-29708b5a00e414f63a187d12af34d0d2/overlap.conservative_peak.narrowPeak.hammock.gz
Optimal peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz
Optimal peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_overlap/glob-240c97f2273cc92383b551c4d2655be9/overlap.optimal_peak.narrowPeak.bb
Optimal peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_overlap/glob-fe7dae7ccfff8f80b0a121847139e130/overlap.optimal_peak.narrowPeak.hammock.gz
Pooled pseudoreplicate 1 vs. 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_ppr/glob-2e6c87fc90e45fa5dbda88934d454cd3/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_ppr/glob-155eada107f68a2195912a39f5dee4bc/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_ppr/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_ppr/glob-b34256f7f8497ceb77fad19f39663af0/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
Pooled replicate
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr1/glob-155eada107f68a2195912a39f5dee4bc/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr1/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr2/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr2/glob-155eada107f68a2195912a39f5dee4bc/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr2/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr2/glob-254907fcd430d7e6c9bf67ac4585adb4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pooled/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pooled/glob-155eada107f68a2195912a39f5dee4bc/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pooled/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pooled/glob-254907fcd430d7e6c9bf67ac4585adb4/rep.pooled_x_ctl.pooled.pval0.01.500K.narrowPeak.gz
Rep1 vs. rep2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1_vs_rep2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep1_vs_rep2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1_vs_rep2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
Replicate 1
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_pr/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-0/glob-b34256f7f8497ceb77fad19f39663af0/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF426JLQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF426JLQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF426JLQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF426JLQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.331M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF426JLQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF426JLQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF426JLQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF426JLQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.331M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF426JLQ.crop_101-2bp.nodup_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-0/glob-155eada107f68a2195912a39f5dee4bc/ENCFF426JLQ.crop_101-2bp.nodup_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-0/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF426JLQ.crop_101-2bp.nodup_x_ctl.pooled.331M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF426JLQ.crop_101-2bp.nodup_x_ctl.pooled.331M.pval0.01.500K.narrowPeak.gz
Replicate 2
Pseudorep 1 vs. pseudorep 2
Blacklist-filtered IDR peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.gz
Blacklist-filtered IDR peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.bb
Blacklist-filtered IDR peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.narrowPeak.hammock.gz
Blacklist-filtered overlap peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_pr/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.gz
Blacklist-filtered overlap peak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_pr/shard-1/glob-155eada107f68a2195912a39f5dee4bc/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb
Blacklist-filtered overlap peak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_pr/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.hammock.gz
Unthresholded raw IDR peakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-1/glob-b34256f7f8497ceb77fad19f39663af0/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
Pseudoreplicate 1
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF901MLH.crop_101-2bp.nodup.pr1_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF901MLH.crop_101-2bp.nodup.pr1_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF901MLH.crop_101-2bp.nodup.pr1_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF901MLH.crop_101-2bp.nodup.pr1_x_ctl.pooled.438M.pval0.01.500K.narrowPeak.gz
Pseudoreplicate 2
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF901MLH.crop_101-2bp.nodup.pr2_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF901MLH.crop_101-2bp.nodup.pr2_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF901MLH.crop_101-2bp.nodup.pr2_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF901MLH.crop_101-2bp.nodup.pr2_x_ctl.pooled.438M.pval0.01.500K.narrowPeak.gz
Blacklist-filtered narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-1/glob-2e6c87fc90e45fa5dbda88934d454cd3/ENCFF901MLH.crop_101-2bp.nodup_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.gz
Blacklist-filtered narrowpeak (BigBed)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-1/glob-155eada107f68a2195912a39f5dee4bc/ENCFF901MLH.crop_101-2bp.nodup_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.bb
Blacklist-filtered narrowpeak (hammock)gs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-1/glob-08ed81b9c4c9ccf6c3692d9ea29b11e0/ENCFF901MLH.crop_101-2bp.nodup_x_ctl.pooled.438M.pval0.01.500K.bfilt.narrowPeak.hammock.gz
Raw narrowpeakgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-1/glob-254907fcd430d7e6c9bf67ac4585adb4/ENCFF901MLH.crop_101-2bp.nodup_x_ctl.pooled.438M.pval0.01.500K.narrowPeak.gz
QC and logs
Pooled pseudoreplicate 1 vs. 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_ppr/glob-156b027b56a0fc9230201b265d9f4bf4/pooled-pr1_vs_pooled-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_ppr/glob-748df5c4b6fa48c407f98a93d42e64c6/pooled-pr1_vs_pooled-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_ppr/glob-8da83e7748d9e54f3e082eb4aa171757/pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.png
Pooled replicate
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr1/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr1.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_ppr2/glob-156b027b56a0fc9230201b265d9f4bf4/rep-pr2.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pooled/glob-156b027b56a0fc9230201b265d9f4bf4/rep.pooled_x_ctl.pooled.pval0.01.500K.bfilt.frip.qc
Rep1 vs. vs vs. rep2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep1_vs_rep2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1_vs_rep2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.png
Replicate 1
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_pr/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/rep1-pr1_vs_rep1-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-0/glob-748df5c4b6fa48c407f98a93d42e64c6/rep1-pr1_vs_rep1-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-0/glob-8da83e7748d9e54f3e082eb4aa171757/rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF426JLQ.crop_101-2bp.nodup.pr1_x_ctl.pooled.331M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF426JLQ.crop_101-2bp.nodup.pr2_x_ctl.pooled.331M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-xcor/shard-0/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF426JLQ.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-xcor/shard-0/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF426JLQ.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-filter/shard-0/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF426JLQ.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-0/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF426JLQ.crop_101-2bp.nodup_x_ctl.pooled.331M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-filter/shard-0/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF426JLQ.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-align/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF426JLQ.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-filter/shard-0/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF426JLQ.crop_101-2bp.nodup.samstats.qc
Replicate 2
Pseudorep 1 vs. pseudorep 2
Fraction of IDR peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.frip.qc
Fraction of overlap peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-overlap_pr/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/rep2-pr1_vs_rep2-pr2.overlap.bfilt.frip.qc
IDR loggs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-1/glob-748df5c4b6fa48c407f98a93d42e64c6/rep2-pr1_vs_rep2-pr2.idr0.05.log
IDR plotgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-idr_pr/shard-1/glob-8da83e7748d9e54f3e082eb4aa171757/rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.png
Pseudoreplicate 1
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr1/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF901MLH.crop_101-2bp.nodup.pr1_x_ctl.pooled.438M.pval0.01.500K.bfilt.frip.qc
Pseudoreplicate 2
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak_pr2/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF901MLH.crop_101-2bp.nodup.pr2_x_ctl.pooled.438M.pval0.01.500K.bfilt.frip.qc
Cross-correlation Plotgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-xcor/shard-1/glob-c0eba07eee633b4055d7d9d85813fdf5/ENCFF901MLH.trim_50bp.filt.no_chrM.15M.cc.plot.png
Cross-correlation scoregs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-xcor/shard-1/glob-75e08482e6a5fe7a0d0013bbdfdf694c/ENCFF901MLH.trim_50bp.filt.no_chrM.15M.cc.qc
Dup QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-filter/shard-1/glob-1b4794e80f740fd50137e3a948d7ba79/ENCFF901MLH.crop_101-2bp.dup.qc
Fraction of peaks in readsgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-call_peak/shard-1/glob-156b027b56a0fc9230201b265d9f4bf4/ENCFF901MLH.crop_101-2bp.nodup_x_ctl.pooled.438M.pval0.01.500K.bfilt.frip.qc
Library complexity QC for filtered BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-filter/shard-1/glob-57d0acc485690c2359d57a5a21e0aedb/ENCFF901MLH.crop_101-2bp.dupmark.lib_complexity.qc
SAMstats log for Raw BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-align/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF901MLH.crop_101-2bp.samstats.qc
SAMstats log for filtered BAMgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-filter/shard-1/glob-7b38d9959cf6f3deb83ac2bd156d8317/ENCFF901MLH.crop_101-2bp.nodup.samstats.qc
Final HTML reportgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-qc_report/glob-eae855c82d0f7e2185388856e7b2cc7b/qc.html
Final QC JSON filegs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-qc_report/glob-3440f922973abb7a616aaf203e0db08b/qc.json
Jensen-Shannon distance plotgs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-jsd/glob-fc36854b6867c1581ab159b09dd7e2f4/ENCFF426JLQ.crop_101-2bp.nodup.jsd_plot.png
Reproducibility QC for IDR peaksgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc
Reproducibility QC for overlap peaksgs://encode-processing/caper_out_v8_20/chip/2380f88f-9df7-4a93-a792-506158d7d2cd/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc
Signal
Pooled replicate
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-macs2_signal_track_pooled/glob-8876d8ced974dc46a0c7a4fac20a3a95/rep.pooled_x_ctl.pooled.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-macs2_signal_track_pooled/glob-7ab0340dfeb10ca109917cbdcc568548/rep.pooled_x_ctl.pooled.pval.signal.bigwig
Replicate 1
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF426JLQ.crop_101-2bp.nodup_x_ctl.pooled.331M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF426JLQ.crop_101-2bp.nodup_x_ctl.pooled.331M.pval.signal.bigwig
Replicate 2
MACS2 signal track (fold-enrichment)gs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-macs2_signal_track/shard-1/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF901MLH.crop_101-2bp.nodup_x_ctl.pooled.438M.fc.signal.bigwig
MACS2 signal track (p-val)gs://encode-processing/caper_out_v8_20/chip/a4bb6317-3e65-493a-92a5-993944cc5a32/call-macs2_signal_track/shard-1/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF901MLH.crop_101-2bp.nodup_x_ctl.pooled.438M.pval.signal.bigwig
Task graph
D cluster_pooled_rep Pooled replicate cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 cluster_pooled_ctl Pooled control cluster_ctl1 Control 1 cluster_ctl2 Control 2 cluster_ctl3 Control 3 cluster_ctl4 Control 4 cluster_ctl5 Control 5 cluster_ctl6 Control 6 4253174248928859597 chip.macs2_signal_track_pooled 6810088743699923683 BW FC 4253174248928859597->6810088743699923683 2841581719913324682 BW p-val 4253174248928859597->2841581719913324682 7637988565070533240 chip.call_peak_pooled 6544242269049426437 Peak (bfilt) 7637988565070533240->6544242269049426437 6603177906608571924 Peak 7637988565070533240->6603177906608571924 -8339216547302901755 chip.idr_ppr 6603177906608571924->-8339216547302901755 5169718856881390862 chip.idr 6603177906608571924->5169718856881390862 5766821650647059986 chip.overlap 6603177906608571924->5766821650647059986 6872553162824298116 chip.overlap_ppr 6603177906608571924->6872553162824298116 6602117870713454385 chip.pool_ta 3707348003291900070 TAG-ALIGN 6602117870713454385->3707348003291900070 3707348003291900070->4253174248928859597 3707348003291900070->7637988565070533240 3707348003291900070->-8339216547302901755 3707348003291900070->5169718856881390862 3707348003291900070->5766821650647059986 3707348003291900070->6872553162824298116 3155651910728889683 chip.call_peak 8602469622646203201 Peak (bfilt) 3155651910728889683->8602469622646203201 5356049869334091128 Peak 3155651910728889683->5356049869334091128 5356049869334091128->5169718856881390862 5356049869334091128->5766821650647059986 3081133856402735917 chip.reproducibility_overlap 5356049869334091128->3081133856402735917 -1042627428845952622 chip.reproducibility_idr 5356049869334091128->-1042627428845952622 -8390648066272002216 chip.bam2ta -3195432848793845682 TAG-ALIGN -8390648066272002216->-3195432848793845682 -3195432848793845682->6602117870713454385 -3195432848793845682->3155651910728889683 -5549518175215923602 chip.macs2_signal_track -3195432848793845682->-5549518175215923602 -3195432848793845682->-8339216547302901755 -3195432848793845682->3081133856402735917 -3195432848793845682->-1042627428845952622 -3195432848793845682->6872553162824298116 -3176558773892976804 chip.filter 674556363065431117 SAMstats QC -3176558773892976804->674556363065431117 -7476727057421814075 Filt/deduped BAM -3176558773892976804->-7476727057421814075 6406393873928733222 LibCmplx QC -3176558773892976804->6406393873928733222 -7476727057421814075->-8390648066272002216 -308831045016836395 chip.jsd -7476727057421814075->-308831045016836395 2095689928475949285 chip.align -4190178103132703517 SAMstats QC 2095689928475949285->-4190178103132703517 7817185882446100409 BAM 2095689928475949285->7817185882446100409 7817185882446100409->-3176558773892976804 5023303225773343413 chip.xcor 1958334863164541878 XCOR Plot 5023303225773343413->1958334863164541878 4023508430151186119 BW FC -5549518175215923602->4023508430151186119 6213788082651532923 BW p-val -5549518175215923602->6213788082651532923 -2632876540581119240 FASTQ R1 (1) -2632876540581119240->2095689928475949285 -2632876540581119240->5023303225773343413 8873869707065092270 FASTQ R2 (1) 8873869707065092270->2095689928475949285 -230199497796826150 chip.call_peak 4377889547595964070 Peak (bfilt) -230199497796826150->4377889547595964070 -3023245301128739108 Peak -230199497796826150->-3023245301128739108 -3023245301128739108->5169718856881390862 -3023245301128739108->5766821650647059986 -3023245301128739108->3081133856402735917 -3023245301128739108->-1042627428845952622 5158976235597598093 chip.bam2ta -1371212877284201008 TAG-ALIGN 5158976235597598093->-1371212877284201008 -1371212877284201008->6602117870713454385 -1371212877284201008->-230199497796826150 -1724551663329465519 chip.macs2_signal_track -1371212877284201008->-1724551663329465519 -1371212877284201008->-8339216547302901755 -1371212877284201008->3081133856402735917 -1371212877284201008->-1042627428845952622 -1371212877284201008->6872553162824298116 -4502261854611295022 chip.filter 4109165864567632046 SAMstats QC -4502261854611295022->4109165864567632046 2530413550450215957 Filt/deduped BAM -4502261854611295022->2530413550450215957 -359300261169853293 LibCmplx QC -4502261854611295022->-359300261169853293 2530413550450215957->5158976235597598093 2530413550450215957->-308831045016836395 -3237729670303703366 chip.align 295120426770320625 SAMstats QC -3237729670303703366->295120426770320625 7499521247633239450 BAM -3237729670303703366->7499521247633239450 7499521247633239450->-4502261854611295022 -8957084685615411394 chip.xcor 614002777581445839 XCOR Plot -8957084685615411394->614002777581445839 1949634428814121148 BW FC -1724551663329465519->1949634428814121148 -7058269487316312155 BW p-val -1724551663329465519->-7058269487316312155 8852083271252185324 FASTQ R1 (1) 8852083271252185324->-3237729670303703366 8852083271252185324->-8957084685615411394 8975067077410029748 FASTQ R2 (1) 8975067077410029748->-3237729670303703366 -6056479071807102514 chip.pool_ta_ctl -2438659817905195167 TAG-ALIGN -6056479071807102514->-2438659817905195167 -2438659817905195167->4253174248928859597 -2438659817905195167->7637988565070533240 -2438659817905195167->3155651910728889683 -2438659817905195167->-5549518175215923602 -2438659817905195167->-230199497796826150 -2438659817905195167->-1724551663329465519 -2438659817905195167->-8339216547302901755 -2438659817905195167->3081133856402735917 -2438659817905195167->-1042627428845952622 -2438659817905195167->6872553162824298116 2395312728846979405 chip.bam2ta_ctl 8960837617989513553 TAG-ALIGN 2395312728846979405->8960837617989513553 8960837617989513553->-6056479071807102514 9074970398744764021 Filt/deduped BAM 9074970398744764021->2395312728846979405 9074970398744764021->-308831045016836395 6947145898651078841 chip.bam2ta_ctl 3906755573386478480 TAG-ALIGN 6947145898651078841->3906755573386478480 3906755573386478480->-6056479071807102514 -1001463849356219583 Filt/deduped BAM -1001463849356219583->6947145898651078841 -1001463849356219583->-308831045016836395 5736466026818029198 chip.bam2ta_ctl -1222934552350891033 TAG-ALIGN 5736466026818029198->-1222934552350891033 -1222934552350891033->-6056479071807102514 4734708628381880734 Filt/deduped BAM 4734708628381880734->5736466026818029198 4734708628381880734->-308831045016836395 985705934426833009 chip.bam2ta_ctl -1512936921369046502 TAG-ALIGN 985705934426833009->-1512936921369046502 -1512936921369046502->-6056479071807102514 -6632022453038842383 Filt/deduped BAM -6632022453038842383->985705934426833009 -6632022453038842383->-308831045016836395 3361865068489196096 chip.bam2ta_ctl -2205679381127140584 TAG-ALIGN 3361865068489196096->-2205679381127140584 -2205679381127140584->-6056479071807102514 4702179854740833355 Filt/deduped BAM 4702179854740833355->3361865068489196096 4702179854740833355->-308831045016836395 1880658088710595479 chip.bam2ta_ctl -7591997673382422634 TAG-ALIGN 1880658088710595479->-7591997673382422634 -7591997673382422634->-6056479071807102514 -8797547735544270479 Filt/deduped BAM -8797547735544270479->1880658088710595479 -8797547735544270479->-308831045016836395 -2759108859384109206 IDR Plot ppr -8339216547302901755->-2759108859384109206 -117769669210426898 IDR Peak ppr -8339216547302901755->-117769669210426898 -117769669210426898->-1042627428845952622 5857629307021099630 IDR Plot rep1_vs_rep2 5169718856881390862->5857629307021099630 8005708772722044875 IDR NPeak rep1_vs_rep2 5169718856881390862->8005708772722044875 8005708772722044875->-1042627428845952622 -2786914174770406810 Overlap Peak rep1_vs_rep2 5766821650647059986->-2786914174770406810 -2786914174770406810->3081133856402735917 -6594209735780953162 Overlap Peak optimal 3081133856402735917->-6594209735780953162 2709932178310208812 Overlap reproducibility 3081133856402735917->2709932178310208812 -388141378541178762 IDR Peak optimal -1042627428845952622->-388141378541178762 -7592522502429390933 IDR reproducibility -1042627428845952622->-7592522502429390933 -8748807220376461360 Overlap Peak ppr 6872553162824298116->-8748807220376461360 -8748807220376461360->3081133856402735917 4204080009605864608 JSD Plot -308831045016836395->4204080009605864608

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser.
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