File table
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FilesPath
Alignment
Replicate 1
BAM/users/leepc12/code/croo/examples/demo/run/align/rep1/ENCSR889WQX_1read.rep1.bam
Replicate 2
BAM/users/leepc12/code/croo/examples/demo/run/align/rep2/ENCSR889WQX_1read.rep2.bam
Bigwigs
Replicate 1
BIGWIG/users/leepc12/code/croo/examples/demo/run/bigwigs/rep1/ENCSR889WQX_1read.rep1.bigwig
Replicate 2
BIGWIG/users/leepc12/code/croo/examples/demo/run/bigwigs/rep2/ENCSR889WQX_1read.rep2.bigwig
Peaks
Replicate 1
PEAK/users/leepc12/code/croo/examples/demo/run/peaks/rep1/ENCSR889WQX_1read.rep1.peak.gz
Replicate 2
PEAK/users/leepc12/code/croo/examples/demo/run/peaks/rep2/ENCSR889WQX_1read.rep2.peak.gz
QC
REPORT/users/leepc12/code/croo/examples/demo/run/qc/report.qc
Task graph
D cluster_rep1 Replicate 1 cluster_rep2 Replicate 2 707447261826720929 align -7394978402342252251 BAM 707447261826720929->-7394978402342252251 7383366595178928823 call_peak -7394978402342252251->7383366595178928823 5852844531687089344 BIGWIG 7383366595178928823->5852844531687089344 -2283705789628136838 PEAK 7383366595178928823->-2283705789628136838 2281133150214743193 qc_report -2283705789628136838->2281133150214743193 3897971861217903992 FASTQ 3897971861217903992->707447261826720929 -2102615007398867928 align 636069600997407658 BAM -2102615007398867928->636069600997407658 -6400779694429276955 call_peak 636069600997407658->-6400779694429276955 2000516518756419552 PEAK -6400779694429276955->2000516518756419552 -7663428118274365835 BIGWIG -6400779694429276955->-7663428118274365835 2000516518756419552->2281133150214743193 -8170613768313526985 FASTQ -8170613768313526985->-2102615007398867928 1018288508542708039 REPORT 2281133150214743193->1018288508542708039

UCSC browser tracks

UCSC browser tracks (if the above link does not work)

UCSC track hub plain text. Paste it directly to custom track edit box on UCSC genome browser. 
track type=bigWig name="(rep1)" priority=1 bigDataUrl="http://mitra.stanford.edu/kundaje/leepc12/run/bigwigs/rep1/ENCSR889WQX_1read.rep1.bigwig"
track type=bigWig name="(rep2)" priority=2 bigDataUrl="http://mitra.stanford.edu/kundaje/leepc12/run/bigwigs/rep2/ENCSR889WQX_1read.rep2.bigwig"