FastQC Report![[OK]](data:image/png;base64,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)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | cfdna_022_UMI_03072016_R2.trim.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 51776 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 76 |
| %GC | 45 |
![[FAIL]](data:image/png;base64,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)
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNN | 748 | 1.4446847960444993 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNN | 592 | 1.1433868974042027 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNN | 432 | 0.8343634116192831 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 425 | 0.8208436341161928 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNNNNNNNN | 338 | 0.6528121137206429 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCNNNNNNNNN | 310 | 0.5987330037082819 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTNNNNNNNNN | 238 | 0.459672435105068 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTANNNNNNNNN | 219 | 0.4229758961681088 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCNNNNNNNNN | 210 | 0.405593325092707 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCNNNNNNNNN | 197 | 0.3804851668726823 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGANNNNNNNNN | 172 | 0.3322002472187886 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACNNNNNNNNN | 171 | 0.3302688504326329 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAANNNNNNNNN | 153 | 0.2955037082818294 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCANNNNNNNNN | 153 | 0.2955037082818294 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTNNNNNNNNN | 148 | 0.2858467243510507 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTNNNNNNNNN | 132 | 0.25494437577255874 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGNNNNNNNNN | 126 | 0.24335599505562422 | No Hit |
| NNTNNNNNNNNNNNNNNNNNNTNTTNTNNNNNNNNNNNNNNNNNNNNNNN | 121 | 0.2336990111248455 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATNNNNNNNNN | 121 | 0.2336990111248455 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGNNNNNNNNN | 99 | 0.19120828182941904 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGNNNNNNNNN | 90 | 0.17382571075401732 | No Hit |
| NNNTNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNCNNNNNNNNNN | 82 | 0.15837453646477131 | No Hit |
| NNNTNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNTNNNNNNNNNN | 75 | 0.14485475896168107 | No Hit |
| NNNTNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNCNNNNNNNNNN | 74 | 0.14292336217552534 | No Hit |
| NNNCNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNCNNNNNNNNNN | 73 | 0.1409919653893696 | No Hit |
| NNGNNNNNNNNNNNNNNNNNNTNTTNTNNNNNNNNNNNNNNNNNNNNNNN | 73 | 0.1409919653893696 | No Hit |
| NNNTNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNANNNNNNNNNN | 72 | 0.13906056860321384 | No Hit |
| NNNCNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNTNNNNNNNNNN | 72 | 0.13906056860321384 | No Hit |
| NNNCNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNCNNNNNNNNNN | 69 | 0.1332663782447466 | No Hit |
| NNTNNNNNNNNNNNNNNNNNNTNGTNTNNNNNNNNNNNNNNNNNNNNNNN | 66 | 0.12747218788627937 | No Hit |
| NNCNNNNNNNNNNNNNNNNNNTNTTNTNNNNNNNNNNNNNNNNNNNNNNN | 66 | 0.12747218788627937 | No Hit |
| NNNTNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNCNNNNNNNNNN | 65 | 0.12554079110012362 | No Hit |
| NNTNNNNNNNNNNNNNNNNNNTNTTNGNNNNNNNNNNNNNNNNNNNNNNN | 60 | 0.11588380716934486 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGNNNNNNNNN | 59 | 0.11395241038318912 | No Hit |
| NNNTNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNTNNNNNNNNNN | 59 | 0.11395241038318912 | No Hit |
| NNNCNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNANNNNNNNNNN | 58 | 0.11202101359703337 | No Hit |
| NNNCNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNGNNNNNNNNNN | 57 | 0.11008961681087763 | No Hit |
| NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNN | 57 | 0.11008961681087763 | No Hit |
| NNTNNNNNNNNNNNNNNNNNNGNTTNTNNNNNNNNNNNNNNNNNNNNNNN | 54 | 0.10429542645241038 | No Hit |
| NNNTNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNTNNNNNNNNNN | 53 | 0.10236402966625464 | No Hit |
| NNTNNNNNNNNNNNNNNNNNNTNTGNTNNNNNNNNNNNNNNNNNNNNNNN | 53 | 0.10236402966625464 | No Hit |
| NNNTNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNGNNNNNNNNNN | 52 | 0.10043263288009889 | No Hit |
| NNNCNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNTNNNNNNNNNN | 52 | 0.10043263288009889 | No Hit |
Adapter Content
Kmer Content
No overrepresented Kmers