Information for 7-TCACTAAATGTA (Motif 9)

G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A
Reverse Opposite:
G C A T G C T A G T A C C T G A A G C T C G A T C G A T C T G A C T A G C G A T A C T G C G T A
p-value:1e-27
log p-value:-6.382e+01
Information Content per bp:1.521
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets142.5 +/- 75.3bp
Average Position of motif in Background77.7 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCACTAAATGTA----
ACTATGAATGAATGAT
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCACTAAATGTA
DDYAATTAATGH-
 A C G T G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A
C G T A C T G A G A C T G T C A C G T A A C G T C G A T C G T A C G T A A C G T C A T G G C T A A C G T

RBM41(RRM)/Homo_sapiens-RNCMPT00053-PBM/HughesRNA

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TCACTAAATGTA-
------AATGTAT
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T

EDT1/MA0990.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCACTAAATGTA
-CAATTAATGC-
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A
A C G T G A T C G T C A C G T A G C A T G C A T T C G A G C T A G C A T C A T G G A T C A C G T

At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCACTAAATGTA
-CATTAAAT---
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A
A C G T T G A C C G T A A C G T A C G T C G T A G T C A G C T A A G C T A C G T A C G T A C G T

RLM1(MacIsaac)/Yeast

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCACTAAATGTA
TCTATAAATA--
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A
G A C T T A G C A G C T G C T A G C A T G T C A G T C A C G T A G C A T C T G A A C G T A C G T

HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCACTAAATGTA
GCATTAAATGCW
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A
C T A G A G T C C G T A G C A T A C G T C G T A C G T A C G T A A C G T C T A G G A T C C G A T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCACTAAATGTA-----
TAAATACATGTAAAATT
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

CST6(MacIsaac)/Yeast

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCACTAAATGTA
----NAAATGCA
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A
A C G T A C G T A C G T A C G T C A T G T C G A C T G A C G T A A C G T C A T G T A G C T C G A

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCACTAAATGTA-----
AAAATACATGTAAAAAT
 G C A T T G A C G C T A G A T C G A C T G C T A G C T A T C G A G A C T C A T G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T