Information for 5-NCTGTATGGCCW (Motif 7)

C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
Reverse Opposite:
C G A T C T A G T A C G G A T C G T A C G C T A A C G T C G T A T A G C G C T A T C A G G T A C
p-value:1e-27
log p-value:-6.408e+01
Information Content per bp:1.449
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets181.2 +/- 70.4bp
Average Position of motif in Background242.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ENOX1(RRM)/Homo_sapiens-RNCMPT00149-PBM/HughesRNA

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:NCTGTATGGCCW
-CTGTCTG----
 C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
A C G T A G T C A G C T C T A G A C G T T G A C A G C T C A T G A C G T A C G T A C G T A C G T

Abd-B/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-NCTGTATGGCCW-
NCNTTTATGGCNNN
 A C G T C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A A C G T
T C A G A T G C T A C G A C G T C A G T C G A T G C T A G A C T A C T G C T A G A T G C T A C G T C G A A T G C

sma-4/MA0925.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:NCTGTATGGCCW
AGTGTCTGGAC-
 C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
C G T A T C A G A C G T A C T G C G A T A G T C A C G T C T A G A C T G T C G A A G T C A C G T

caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:NCTGTATGGCCW
-WTTTATGRCC-
 C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
A C G T C G A T A C G T G C A T G A C T G T C A A G C T A C T G C T A G A G T C G A T C A C G T

HNRPLL(RRM)/Homo_sapiens-RNCMPT00178-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:NCTGTATGGCCW
--TGTGTGT---
 C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
A C G T A C G T A C G T A C T G A G C T C T A G A C G T A C T G A G C T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:NCTGTATGGCCW
-TTTTATGGCTN
 C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

IGF2BP2(KH,RRM)/Homo_sapiens-RNCMPT00033-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:NCTGTATGGCCW
--TGTTTGT---
 C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
A C G T A C G T A C G T A C T G C G A T C G A T A C G T A C T G A C G T A C G T A C G T A C G T

cad/MA0216.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:NCTGTATGGCCW
TTTTTATGGCC-
 C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
C A G T G C A T A C G T A C G T C G A T C T G A A G C T C A T G C T A G A G T C G A T C A C G T

HAP4/HAP4_YPD/1-GZF3,11-HAP4(Harbison)/Yeast

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:NCTGTATGGCCW
--TGATTGGCC-
 C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A
A C G T A C G T A G C T A T C G T G C A C A G T A G C T T A C G A T C G A T G C A G T C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---NCTGTATGGCCW--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T C A T G A G T C C G A T A C T G G C A T G T C A C G A T C A T G C A T G A T G C G A T C G C T A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G